Sed0004520 (gene) Chayote v1

Overview


Name	Sed0004520
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transcription initiation factor TFIID subunit 8
Location	LG03: 1554449 .. 1555911 (+)
RNA-Seq Expression	Sed0004520
Synteny	Sed0004520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAAAAATCTGTAATTTCCCTATTTAATTGGCAAGTGCCAACCCTTTTACTTTGTTTCACTTTTGAGCTTTTTTTCCGAACGCCAATTTTGTTCTTAGTTCGATATCGGACGGATTAGGGTTTTCTCATATGCCAAACTTTTTATCTTTGGATTGATTTAGTTTGTGGTTGTGTACTCCATCTCCATCTGGGTTTGTTTTTCTAGTTTTAGATTTTCTTGTTCTTTGTTTGAGTGAGTGGTGCTTTTGGGTGTTAAAACTTGTGACCGATTATGTGATATGAATGTTTGAATATGAACAATGACGAGACAGAATTCAGGTAGCGAAGACTTCACACGGGCGCTTTCCAAGATCGCTGTTGCTCAAATTTGTGAGAGTGAGGGGTTTCAATCTTTCCAGCAATCTGCCCTCGAAACATTCACTGATATTACAGTTGGGTATCTTCAAAATCTGGGAAAGATTGCAAATTTATGTTCTAATTTTGCTGGCAGAACGGAGTGTAATGTATTCGATGTAATTCAAGCACTTGAGGATTTGGGGTCCGTCCAAGGATTTGAGCATTGTCTTGCAAGTTCCAGCACTGTTAAAGAGATTGCTTGTTTTGTTGCTCAAGCTGAAGAAATCCCGTTTGCATTCGCTGTTCCCGAATTTACAGTTGTTAGAGAGCGAAAGCCGAAGCCTACTTTCTTGCACATTGGCGAAGAACCTCCTGGAAAGCATATACCTTCTTGGTTGCCTGCACTCCCTGATCCCGATATGTACATTCCGTCCCGAACGGTTAAATCTGAGCCAGAAAAACAATGTAAGGGTGCAGAACAATCCTTGTGGAATCTGCAGAAGTGGTTGTTTTTCAAAGAATTGGAAGGATCCCGAAGAGAAGGCCCTCGAAATGCAGCTATGACCAAACAAACTCAAGGAAGCAACCCATTTCTTGCTCCTCCCCTGGACTTTGGTGTGAAGGAAGTTTCTTCGGTCGATCTTCCGGAGAAGATTTTGAACAATTCTAGTACTGAATTTCCTGTCCTTATTAGTGAGAACTGTCTTGTTTCAGTGCTGGAAACTTTTGCTCCTGCTATTGAATCAATAAAGAACAATCTGTCTGAGGAAAAGTTCTCTCTGAATGGGAGATCCACCTTACAGTTTAAGATTCGGACCGGAAAGAAGCCTGTAGGAAACAGGATAGAATCGAGGGCGCTAAACAATGGTGTGAAGAATTCTTCATCCTGGTTTGTAGGGGTAGATGGGAAGGATGACAAGAAAAGAAAGGCTGAGAAGATTCTGAAGGATTCGATGGAGAATTCCAATGAGCTATCTCAGTTCTAATTAAGATGCTTGATTTAAATTTGTACAAGGAATTTAGGAGACGAGCTGCAGTTTTTTCCAGGTAGTGAAAATTACTGGCATTGTATTATGTCCTATTCGCATTGTAGAATGAAAAGATTCAAATTTATGAAAAGAGAG

mRNA sequence

TAAAAAAAAATCTGTAATTTCCCTATTTAATTGGCAAGTGCCAACCCTTTTACTTTGTTTCACTTTTGAGCTTTTTTTCCGAACGCCAATTTTGTTCTTAGTTCGATATCGGACGGATTAGGGTTTTCTCATATGCCAAACTTTTTATCTTTGGATTGATTTAGTTTGTGGTTGTGTACTCCATCTCCATCTGGGTTTGTTTTTCTAGTTTTAGATTTTCTTGTTCTTTGTTTGAGTGAGTGGTGCTTTTGGGTGTTAAAACTTGTGACCGATTATGTGATATGAATGTTTGAATATGAACAATGACGAGACAGAATTCAGGTAGCGAAGACTTCACACGGGCGCTTTCCAAGATCGCTGTTGCTCAAATTTGTGAGAGTGAGGGGTTTCAATCTTTCCAGCAATCTGCCCTCGAAACATTCACTGATATTACAGTTGGGTATCTTCAAAATCTGGGAAAGATTGCAAATTTATGTTCTAATTTTGCTGGCAGAACGGAGTGTAATGTATTCGATGTAATTCAAGCACTTGAGGATTTGGGGTCCGTCCAAGGATTTGAGCATTGTCTTGCAAGTTCCAGCACTGTTAAAGAGATTGCTTGTTTTGTTGCTCAAGCTGAAGAAATCCCGTTTGCATTCGCTGTTCCCGAATTTACAGTTGTTAGAGAGCGAAAGCCGAAGCCTACTTTCTTGCACATTGGCGAAGAACCTCCTGGAAAGCATATACCTTCTTGGTTGCCTGCACTCCCTGATCCCGATATGTACATTCCGTCCCGAACGGTTAAATCTGAGCCAGAAAAACAATGTAAGGGTGCAGAACAATCCTTGTGGAATCTGCAGAAGTGGTTGTTTTTCAAAGAATTGGAAGGATCCCGAAGAGAAGGCCCTCGAAATGCAGCTATGACCAAACAAACTCAAGGAAGCAACCCATTTCTTGCTCCTCCCCTGGACTTTGGTGTGAAGGAAGTTTCTTCGGTCGATCTTCCGGAGAAGATTTTGAACAATTCTAGTACTGAATTTCCTGTCCTTATTAGTGAGAACTGTCTTGTTTCAGTGCTGGAAACTTTTGCTCCTGCTATTGAATCAATAAAGAACAATCTGTCTGAGGAAAAGTTCTCTCTGAATGGGAGATCCACCTTACAGTTTAAGATTCGGACCGGAAAGAAGCCTGTAGGAAACAGGATAGAATCGAGGGCGCTAAACAATGGTGTGAAGAATTCTTCATCCTGGTTTGTAGGGGTAGATGGGAAGGATGACAAGAAAAGAAAGGCTGAGAAGATTCTGAAGGATTCGATGGAGAATTCCAATGAGCTATCTCAGTTCTAATTAAGATGCTTGATTTAAATTTGTACAAGGAATTTAGGAGACGAGCTGCAGTTTTTTCCAGGTAGTGAAAATTACTGGCATTGTATTATGTCCTATTCGCATTGTAGAATGAAAAGATTCAAATTTATGAAAAGAGAG

Coding sequence (CDS)

ATGACGAGACAGAATTCAGGTAGCGAAGACTTCACACGGGCGCTTTCCAAGATCGCTGTTGCTCAAATTTGTGAGAGTGAGGGGTTTCAATCTTTCCAGCAATCTGCCCTCGAAACATTCACTGATATTACAGTTGGGTATCTTCAAAATCTGGGAAAGATTGCAAATTTATGTTCTAATTTTGCTGGCAGAACGGAGTGTAATGTATTCGATGTAATTCAAGCACTTGAGGATTTGGGGTCCGTCCAAGGATTTGAGCATTGTCTTGCAAGTTCCAGCACTGTTAAAGAGATTGCTTGTTTTGTTGCTCAAGCTGAAGAAATCCCGTTTGCATTCGCTGTTCCCGAATTTACAGTTGTTAGAGAGCGAAAGCCGAAGCCTACTTTCTTGCACATTGGCGAAGAACCTCCTGGAAAGCATATACCTTCTTGGTTGCCTGCACTCCCTGATCCCGATATGTACATTCCGTCCCGAACGGTTAAATCTGAGCCAGAAAAACAATGTAAGGGTGCAGAACAATCCTTGTGGAATCTGCAGAAGTGGTTGTTTTTCAAAGAATTGGAAGGATCCCGAAGAGAAGGCCCTCGAAATGCAGCTATGACCAAACAAACTCAAGGAAGCAACCCATTTCTTGCTCCTCCCCTGGACTTTGGTGTGAAGGAAGTTTCTTCGGTCGATCTTCCGGAGAAGATTTTGAACAATTCTAGTACTGAATTTCCTGTCCTTATTAGTGAGAACTGTCTTGTTTCAGTGCTGGAAACTTTTGCTCCTGCTATTGAATCAATAAAGAACAATCTGTCTGAGGAAAAGTTCTCTCTGAATGGGAGATCCACCTTACAGTTTAAGATTCGGACCGGAAAGAAGCCTGTAGGAAACAGGATAGAATCGAGGGCGCTAAACAATGGTGTGAAGAATTCTTCATCCTGGTTTGTAGGGGTAGATGGGAAGGATGACAAGAAAAGAAAGGCTGAGAAGATTCTGAAGGATTCGATGGAGAATTCCAATGAGCTATCTCAGTTCTAA

Protein sequence

MTRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRTECNVFDVIQALEDLGSVQGFEHCLASSSTVKEIACFVAQAEEIPFAFAVPEFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTVKSEPEKQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSVDLPEKILNNSSTEFPVLISENCLVSVLETFAPAIESIKNNLSEEKFSLNGRSTLQFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQF

Homology

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BLAST of Sed0004520 vs. NCBI nr
Match: XP_023538136.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.5 bits (1329), Expect = 1.7e-142
Identity = 273/360 (75.83%), Postives = 302/360 (83.89%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N G EDF +AL+KIAVAQICESEGFQ+FQQSALET  DI V Y+QN+GK AN C+NF
Sbjct: 17  TRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECNVFD+IQALEDLGS+QGF      EHCLASSSTVKEIA +VAQAEEIPFA+AVP
Sbjct: 77  AGRTECNVFDIIQALEDLGSIQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV----------KSEPE 181
           +F VV+ERK +PTFL IGEE PGKHIPSWLPALPDP+ YI S TV          K+EPE
Sbjct: 137 KFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQCK AE+SLWNLQ+WLF   LEGSRREGPRNAAMTKQTQ SNPFLAPPL FG KEVSSV
Sbjct: 197 KQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSV 256

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNNL--SEEKFSLNGRSTL 301
            LP++ILNNSST++PV   ENCL    VSVLETFAPAIES+KN+L  SEEKFSLN RST+
Sbjct: 257 VLPDRILNNSSTQYPVPARENCLVDTHVSVLETFAPAIESMKNSLHDSEEKFSLNRRSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           QFKI TGKKPV + IE +ALNNGVKNSSSWFVG D KDDKKRKAEKILK+S+ENSNEL Q
Sbjct: 317 QFKIGTGKKPVSSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQ 376

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BLAST of Sed0004520 vs. NCBI nr
Match: KAG7033206.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 516.2 bits (1328), Expect = 2.2e-142
Identity = 274/360 (76.11%), Postives = 301/360 (83.61%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N G EDF +AL+KIAVAQICESEGFQ+FQQSALET  DI V Y+QN+GK AN C+NF
Sbjct: 17  TRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECNVFD+IQALEDLGSVQGF      EHCLASSSTVKEIA +VAQAEEIPFA+AVP
Sbjct: 77  AGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV----------KSEPE 181
           +F VV+ERK +PTFL IGEE PGKHIPSWLPALPDP+ YI S TV          K+EPE
Sbjct: 137 KFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQCK AE+SLWNLQ+WLF   LEGSRREGPRNAAMTKQTQ SNPFLAPPL FG KEVSSV
Sbjct: 197 KQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSV 256

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNNL--SEEKFSLNGRSTL 301
            LP++ILNNSSTE+PV   ENCL    VSVLETFAPAIES+KN+L  SEEKFSLN RST+
Sbjct: 257 VLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNSLHDSEEKFSLNRRSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           QFKI TGKKP  + IE +ALNNGVKNSSSWFVG D KDDKKRKAEKILK+S+ENSNEL Q
Sbjct: 317 QFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQ 376

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BLAST of Sed0004520 vs. NCBI nr
Match: KAG6602532.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 516.2 bits (1328), Expect = 2.2e-142
Identity = 274/360 (76.11%), Postives = 301/360 (83.61%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N G EDF +AL+KIAVAQICESEGFQ+FQQSALET  DI V Y+QN+GK AN C+NF
Sbjct: 18  TRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANF 77

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECNVFD+IQALEDLGSVQGF      EHCLASSSTVKEIA +VAQAEEIPFA+AVP
Sbjct: 78  AGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVP 137

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV----------KSEPE 181
           +F VV+ERK +PTFL IGEE PGKHIPSWLPALPDP+ YI S TV          K+EPE
Sbjct: 138 KFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPE 197

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQCK AE+SLWNLQ+WLF   LEGSRREGPRNAAMTKQTQ SNPFLAPPL FG KEVSSV
Sbjct: 198 KQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSV 257

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNNL--SEEKFSLNGRSTL 301
            LP++ILNNSSTE+PV   ENCL    VSVLETFAPAIES+KN+L  SEEKFSLN RST+
Sbjct: 258 VLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNSLHDSEEKFSLNRRSTV 317

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           QFKI TGKKP  + IE +ALNNGVKNSSSWFVG D KDDKKRKAEKILK+S+ENSNEL Q
Sbjct: 318 QFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQ 377

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BLAST of Sed0004520 vs. NCBI nr
Match: XP_022990062.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita maxima])

HSP 1 Score: 515.0 bits (1325), Expect = 4.9e-142
Identity = 274/360 (76.11%), Postives = 302/360 (83.89%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N G EDF +AL+KIA+AQICESEGFQ+FQQSALET  DI V Y+QN+GK AN C+NF
Sbjct: 17  TRKNLGGEDFPQALAKIAIAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECNVFD+IQALEDLGSVQGF      EHCLASSSTVKEIA +VAQAEEIPFA+AVP
Sbjct: 77  AGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV----------KSEPE 181
           +F VV+ERK +PTFL IGEE PGKHIPSWLPALPDP+ YI S TV          K+EPE
Sbjct: 137 KFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQCKGAE+SLWNLQ+ LF   LEGSRREGPRNAAMTKQTQ SNPFLAPPL FG KEVSSV
Sbjct: 197 KQCKGAEKSLWNLQQGLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSV 256

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNNL--SEEKFSLNGRSTL 301
            LP++ILNNSSTE+PV   ENCL    VSVLETFAPAIES+KN+L  SEEKFSLN RST+
Sbjct: 257 VLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESMKNSLHDSEEKFSLNRRSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           QFKI TGKKPV + IE +ALNNGVKNSSSWFVG D KDDKKRKAEKILK+S+ENSNEL Q
Sbjct: 317 QFKIGTGKKPVSSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQ 376

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BLAST of Sed0004520 vs. NCBI nr
Match: XP_022921494.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita moschata])

HSP 1 Score: 511.5 bits (1316), Expect = 5.5e-141
Identity = 273/360 (75.83%), Postives = 299/360 (83.06%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N G EDF +AL+KIAVAQICESEGFQ+FQQSALET  DI V Y+QN+GK AN C+NF
Sbjct: 17  TRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECNVFDVIQALEDLGSVQGF      E CLASSSTVKEIA +VAQAEEIPFA+AVP
Sbjct: 77  AGRTECNVFDVIQALEDLGSVQGFAGALDIERCLASSSTVKEIARYVAQAEEIPFAYAVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV----------KSEPE 181
           +F VV+ERK +PTFL  GEE PGKHIPSWLPALPDP+ YI S TV          K+EPE
Sbjct: 137 KFPVVKERKLRPTFLQTGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQCK AE+SLWNLQ+WLF   LEGSRREGPRNAAMTKQTQ SNPFLAPPL FG KEVSSV
Sbjct: 197 KQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSV 256

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNNL--SEEKFSLNGRSTL 301
            LP++ILNNSSTE+PV   ENCL    VSVLETFAPAIES+KN+L  SEEKFSLN RST+
Sbjct: 257 VLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNSLHDSEEKFSLNRRSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           QFKI TGKKP  + IE +ALNNGVKNSSSWFVG D KDDKKRKAEKILK+S+ENSNEL Q
Sbjct: 317 QFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQ 376

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BLAST of Sed0004520 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-41
Identity = 130/355 (36.62%), Postives = 184/355 (51.83%), Query Frame = 0


Query: 6   SGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRT 65
           S S +F+ A +K AVAQ+CES G+++F+  ALE+ +   + Y+  LGK A   +N  GR+
Sbjct: 21  SESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRS 80

Query: 66  ECNVFDVIQALEDLGSVQG-----FEHC-LASSSTVKEIACFVAQAEEIPFAFAVPEFTV 125
           +CNVFD+I AL+DL    G      E C L  S  ++EI  FV  +EE+PF+  +P F V
Sbjct: 81  QCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPV 140

Query: 126 V---RERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPS----------RTVKSEPEK 185
               R RK  P+F+ IGE PPGKHIP WLPA PDP  Y  +          R  K E  +
Sbjct: 141 AISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQAR 200

Query: 186 QCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSVD 245
           Q + AE++L +LQ+ L  K                      NP     +D GVKE    D
Sbjct: 201 QRRKAERALLSLQRKLVCK------------------ISSRNPVWG-DMD-GVKEEMRDD 260

Query: 246 LPEKILNNSSTEFPVLISENCLVSVLETFAPAIESIKNNLSEEKFS--LNGRSTLQFKIR 305
             E  L + S+   V       +SV+E FAPA+E+ ++  S E  +     +     K+R
Sbjct: 261 --ESELRSVSSGEKVESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKKNKPVALSKLR 320

Query: 306 TGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           T KK +G  ++      G     S FV  + +DDK+R+AE IL+  MEN  +L+Q
Sbjct: 321 TEKKFLGQPLDLSLQMKGEDRPIS-FVREEDRDDKRRRAEFILRQCMENPVDLNQ 352

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BLAST of Sed0004520 vs. ExPASy Swiss-Prot
Match: Q5VWG9 (Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-08
Identity = 41/143 (28.67%), Postives = 72/143 (50.35%), Query Frame = 0


Query: 9   EDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRTECN 68
           E ++R+L +++VAQIC++ G+ S Q SA    TD+   YLQ LG+  +  S   GRT+  
Sbjct: 3   ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62

Query: 69  VFDVIQALEDLGSVQGFEHCLASSSTVKEIACFVAQAEEIPFAFAVPEFTVVRE---RKP 128
           + DV +A + +G             ++ E+  ++   E + F   +P F V +    + P
Sbjct: 63  LDDVGEAFQLMG------------VSLHELEDYIHNIEPVTFPHQIPSFPVSKNNVLQFP 122

Query: 129 KPTFLHIGEEPPGKHIPSWLPAL 149
           +P      E    ++IP +LP +
Sbjct: 123 QPGSKDAEERK--EYIPDYLPPI 131

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BLAST of Sed0004520 vs. ExPASy Swiss-Prot
Match: Q5HZG4 (Transcription initiation factor TFIID subunit 3 OS=Mus musculus OX=10090 GN=Taf3 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 7.4e-08
Identity = 41/143 (28.67%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 9   EDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRTECN 68
           E ++R+L +++VAQIC++ G+ S Q SA    TD+   YLQ LG+  +  S   GRT+  
Sbjct: 3   ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62

Query: 69  VFDVIQALEDLGSVQGFEHCLASSSTVKEIACFVAQAEEIPFAFAVPEFTVVRE---RKP 128
           + DV +A + +G              + E+  ++   E + F   +P F V +    + P
Sbjct: 63  LDDVGEAFQLMG------------VNLHELEDYIHNIEPVTFPHQIPSFPVSKNNVLQFP 122

Query: 129 KPTFLHIGEEPPGKHIPSWLPAL 149
           +P      E     +IP +LP +
Sbjct: 123 QPGSKDAEERK--DYIPDYLPPI 131

[Close]

BLAST of Sed0004520 vs. ExPASy Swiss-Prot
Match: Q5F489 (Transcription initiation factor TFIID subunit 3 OS=Gallus gallus OX=9031 GN=TAF3 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.7e-07
Identity = 40/143 (27.97%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 9   EDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRTECN 68
           E ++R L +++VAQIC++ G+ S Q SA +  TD+   YLQ LG+  +      GRT+  
Sbjct: 3   ETYSRWLLRVSVAQICQALGWDSVQVSACDLLTDVLQRYLQGLGRGCHRYCELYGRTDPI 62

Query: 69  VFDVIQALEDLGSVQGFEHCLASSSTVKEIACFVAQAEEIPFAFAVPEFTVVRE---RKP 128
           + DV  A + +G              + E+  ++   E + FA  +P F V +    + P
Sbjct: 63  LDDVGDAFKLMG------------VNLHELEDYIHNIEPVTFAHQIPSFPVSKNNVLQFP 122

Query: 129 KPTFLHIGEEPPGKHIPSWLPAL 149
           +P      E    ++IP ++P +
Sbjct: 123 QPGSKDAEERK--EYIPDYMPPI 131

[Close]

BLAST of Sed0004520 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.5e-05
Identity = 36/149 (24.16%), Postives = 63/149 (42.28%), Query Frame = 0


Query: 13  RALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRTECNVFDV 72
           R   ++ V+ +    GF S +++A+E+ T++   YL  +G+ A        RT+  + D+
Sbjct: 24  RRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 73  IQALEDLGSVQGFEHCLASSSTVKEIACFVAQAEEIPFAFAVPEFTVVRERKPKPTFLHI 132
           +  L ++G      +  +  +  K     V  A  +     VP+     + KP P     
Sbjct: 84  VVTLIEMGF-----NVDSLPAYAKRSQRMVITAPPVTNNPVVPKALSAGDNKPHPA---- 143

Query: 133 GEEPPGKHIPSWLPALPDPDMYIPSRTVK 162
                  HIPS  P  PDP  YI + T +
Sbjct: 144 -------HIPSHFPEFPDPHTYIKTPTYR 156

[Close]

BLAST of Sed0004520 vs. ExPASy TrEMBL
Match: A0A6J1JHK2 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111487069 PE=3 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.4e-142
Identity = 274/360 (76.11%), Postives = 302/360 (83.89%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N G EDF +AL+KIA+AQICESEGFQ+FQQSALET  DI V Y+QN+GK AN C+NF
Sbjct: 17  TRKNLGGEDFPQALAKIAIAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECNVFD+IQALEDLGSVQGF      EHCLASSSTVKEIA +VAQAEEIPFA+AVP
Sbjct: 77  AGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV----------KSEPE 181
           +F VV+ERK +PTFL IGEE PGKHIPSWLPALPDP+ YI S TV          K+EPE
Sbjct: 137 KFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQCKGAE+SLWNLQ+ LF   LEGSRREGPRNAAMTKQTQ SNPFLAPPL FG KEVSSV
Sbjct: 197 KQCKGAEKSLWNLQQGLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSV 256

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNNL--SEEKFSLNGRSTL 301
            LP++ILNNSSTE+PV   ENCL    VSVLETFAPAIES+KN+L  SEEKFSLN RST+
Sbjct: 257 VLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESMKNSLHDSEEKFSLNRRSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           QFKI TGKKPV + IE +ALNNGVKNSSSWFVG D KDDKKRKAEKILK+S+ENSNEL Q
Sbjct: 317 QFKIGTGKKPVSSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQ 376

[Close]

BLAST of Sed0004520 vs. ExPASy TrEMBL
Match: A0A6J1E0M7 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111429744 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.6e-141
Identity = 273/360 (75.83%), Postives = 299/360 (83.06%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N G EDF +AL+KIAVAQICESEGFQ+FQQSALET  DI V Y+QN+GK AN C+NF
Sbjct: 17  TRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECNVFDVIQALEDLGSVQGF      E CLASSSTVKEIA +VAQAEEIPFA+AVP
Sbjct: 77  AGRTECNVFDVIQALEDLGSVQGFAGALDIERCLASSSTVKEIARYVAQAEEIPFAYAVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV----------KSEPE 181
           +F VV+ERK +PTFL  GEE PGKHIPSWLPALPDP+ YI S TV          K+EPE
Sbjct: 137 KFPVVKERKLRPTFLQTGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQCK AE+SLWNLQ+WLF   LEGSRREGPRNAAMTKQTQ SNPFLAPPL FG KEVSSV
Sbjct: 197 KQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSV 256

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNNL--SEEKFSLNGRSTL 301
            LP++ILNNSSTE+PV   ENCL    VSVLETFAPAIES+KN+L  SEEKFSLN RST+
Sbjct: 257 VLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNSLHDSEEKFSLNRRSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           QFKI TGKKP  + IE +ALNNGVKNSSSWFVG D KDDKKRKAEKILK+S+ENSNEL Q
Sbjct: 317 QFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQ 376

[Close]

BLAST of Sed0004520 vs. ExPASy TrEMBL
Match: A0A0A0KSJ1 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_5G639490 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.9e-137
Identity = 261/359 (72.70%), Postives = 295/359 (82.17%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N GSEDF RAL+KIAVAQICESEGFQ FQQSALET  D+ V Y+QN+G  AN C+NF
Sbjct: 17  TRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAVRYVQNMGSTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECN+FD+IQALEDLGSVQGF      EHCLASSSTVKE A +VAQAEE+PFA++VP
Sbjct: 77  AGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFARYVAQAEEVPFAYSVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPS----------RTVKSEPE 181
           +F VV+ERK +P+FL IGEEPPG+HIPSWLPALPDP+ YI S          +T+K+EPE
Sbjct: 137 KFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPIVKEEVVEPQTIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
           KQC+  E+S WNLQ+WLF   LEGS+RE PRNAAMTKQ Q SNPFLAPPL FG KEVSS+
Sbjct: 197 KQCR-TEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNPFLAPPLQFGEKEVSSI 256

Query: 242 DLPEKILNNSSTEFPVLISENCL----VSVLETFAPAIESIKNN--LSEEKFSLNGRSTL 301
            LP+K+LNNSSTE+ V + ENC     VSVLETFAPAIESIKNN  +SEEK+SLN +ST+
Sbjct: 257 VLPDKVLNNSSTEYHVPVMENCQVDTHVSVLETFAPAIESIKNNFHMSEEKYSLNRKSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELS 339
           QFKI TGKK  GN IE RALNNGVK SSSWFVG D KDDKKRKAEKILKDSMENSNELS
Sbjct: 317 QFKIGTGKKAAGNMIELRALNNGVKKSSSWFVGEDEKDDKKRKAEKILKDSMENSNELS 374

[Close]

BLAST of Sed0004520 vs. ExPASy TrEMBL
Match: A0A1S3CA13 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103498533 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 9.7e-136
Identity = 260/359 (72.42%), Postives = 294/359 (81.89%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N GSEDF RAL+KIAVAQICESEGFQ FQQSALET  D+ V Y+QN+G  AN C+NF
Sbjct: 17  TRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAVRYVQNMGSTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECN+FD+IQALEDLGSVQGF      EHCLASSSTVKEIA +VAQAEEIPFA++VP
Sbjct: 77  AGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIARYVAQAEEIPFAYSVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPS----------RTVKSEPE 181
           +F VV+ERK +P+FL IGEEPPG+HIPSWLPALPDP+ YI S          +T+K+EPE
Sbjct: 137 KFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPIVKEEVVEPQTIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
            QC+ +E+S  NLQ+WLF   LEGS+RE PRNAAMTKQ Q SNPFLAPPL FG KEVSS+
Sbjct: 197 IQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNPFLAPPLQFGEKEVSSI 256

Query: 242 DLPEKILNNSSTEFPVLISENC----LVSVLETFAPAIESIKNN--LSEEKFSLNGRSTL 301
            LP K+LNNSSTE+ V + ENC     VSVLETFAPAIESIKNN  +SEEK+SLN +ST+
Sbjct: 257 VLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNNFHMSEEKYSLNRKSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELS 339
           QFKI TGKK  G+ IE  ALNNGVKNSSSWFVG D KDDKKRKAEKILKDSMENSNELS
Sbjct: 317 QFKIGTGKKAAGSMIELTALNNGVKNSSSWFVGEDEKDDKKRKAEKILKDSMENSNELS 375

[Close]

BLAST of Sed0004520 vs. ExPASy TrEMBL
Match: A0A5D3BLI6 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002430 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 4.8e-135
Identity = 259/359 (72.14%), Postives = 293/359 (81.62%), Query Frame = 0


Query: 2   TRQNSGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNF 61
           TR+N GSEDF RAL+KIAVAQICESEGFQ FQQSALET  D+ V Y+QN+G  AN C+NF
Sbjct: 17  TRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAVRYVQNMGSTANFCANF 76

Query: 62  AGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIPFAFAVP 121
           AGRTECN+FD+IQALEDLGSVQGF      EHCLASSSTVKEIA +VAQAEEIPFA++VP
Sbjct: 77  AGRTECNLFDIIQALEDLGSVQGFVGASDIEHCLASSSTVKEIARYVAQAEEIPFAYSVP 136

Query: 122 EFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPS----------RTVKSEPE 181
           +F VV+ERK +P+FL IGEEPPG+HIPSWLPALPDP+ YI S          +T+K+EPE
Sbjct: 137 KFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPIVKEEVVEPQTIKTEPE 196

Query: 182 KQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSV 241
            QC+ +E+S  NLQ+WLF   LEGS+RE PRNAAMTKQ Q SNPFLAPPL FG KEVSS+
Sbjct: 197 IQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNPFLAPPLQFGEKEVSSI 256

Query: 242 DLPEKILNNSSTEFPVLISENC----LVSVLETFAPAIESIKNN--LSEEKFSLNGRSTL 301
            LP K+LNNSSTE+ V + ENC     VSVLETFAPAIESIKNN  +SEEK+SLN +ST+
Sbjct: 257 VLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNNFHMSEEKYSLNRKSTV 316

Query: 302 QFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELS 339
           QFKI TGKK  G+ IE  ALNNGVK SSSWFVG D KDDKKRKAEKILKDSMENSNELS
Sbjct: 317 QFKIGTGKKAAGSMIELTALNNGVKKSSSWFVGEDEKDDKKRKAEKILKDSMENSNELS 375

[Close]

BLAST of Sed0004520 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 172.2 bits (435), Expect = 7.3e-43
Identity = 130/370 (35.14%), Postives = 187/370 (50.54%), Query Frame = 0


Query: 3   RQNSGSEDFTRALSKIAVAQICES-------------EG--FQSFQQSALETFTDITVGY 62
           R  S   DF  AL+++A AQICES             EG  F SFQ++ALET TD+ + Y
Sbjct: 19  RSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRFSSFQETALETLTDVVIQY 78

Query: 63  LQNLGKIANLCSNFAGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACF 122
           +QN+GK A    N AGR E N  D++QALEDLGS  GF      EHCLA S  VK+I  +
Sbjct: 79  IQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAHDVEHCLADSGVVKDIIRY 138

Query: 123 VAQAEEIPFAFAVPEFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTV- 182
             +AEEIPF +++P F   R ++P P+F  IG EPP +HIP WLPA P+  M   S  + 
Sbjct: 139 TGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPVWLPAFPETKMSNGSEEIN 198

Query: 183 --KSEPEKQCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFG 242
             K E + Q +    SL ++Q+ +    L+  +    ++     +    NPFLA P+  G
Sbjct: 199 VDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSMDQKDVQKPIEEPEGNPFLAAPIWVG 258

Query: 243 VKEVS-------SVDLPEKILNNSSTEFPVLISENCLVSVLETFAPAIE-SIKNNLS--E 302
            K VS       S    E+I  N   E  + +S +  +  LE +A + + + KN L+  E
Sbjct: 259 EKNVSLSRVVCPSELRKEEISTNHLPEKHMSMSHH--IPALEAYALSDKINDKNRLAGME 318

Query: 303 EKFSLNGRST----LQFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAE 335
           ++   +G  T    L+FKI T K     +I      N       WF     K+D  ++ +
Sbjct: 319 DEQKRDGARTQGALLRFKIGTRKASECWKI------NQCLEEKGWF-----KEDGNKREK 375

[Close]

BLAST of Sed0004520 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-42
Identity = 130/355 (36.62%), Postives = 184/355 (51.83%), Query Frame = 0


Query: 6   SGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRT 65
           S S +F+ A +K AVAQ+CES G+++F+  ALE+ +   + Y+  LGK A   +N  GR+
Sbjct: 21  SESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRS 80

Query: 66  ECNVFDVIQALEDLGSVQG-----FEHC-LASSSTVKEIACFVAQAEEIPFAFAVPEFTV 125
           +CNVFD+I AL+DL    G      E C L  S  ++EI  FV  +EE+PF+  +P F V
Sbjct: 81  QCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPV 140

Query: 126 V---RERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPS----------RTVKSEPEK 185
               R RK  P+F+ IGE PPGKHIP WLPA PDP  Y  +          R  K E  +
Sbjct: 141 AISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQAR 200

Query: 186 QCKGAEQSLWNLQKWLFFKELEGSRREGPRNAAMTKQTQGSNPFLAPPLDFGVKEVSSVD 245
           Q + AE++L +LQ+ L  K                      NP     +D GVKE    D
Sbjct: 201 QRRKAERALLSLQRKLVCK------------------ISSRNPVWG-DMD-GVKEEMRDD 260

Query: 246 LPEKILNNSSTEFPVLISENCLVSVLETFAPAIESIKNNLSEEKFS--LNGRSTLQFKIR 305
             E  L + S+   V       +SV+E FAPA+E+ ++  S E  +     +     K+R
Sbjct: 261 --ESELRSVSSGEKVESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKKNKPVALSKLR 320

Query: 306 TGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSMENSNELSQ 340
           T KK +G  ++      G     S FV  + +DDK+R+AE IL+  MEN  +L+Q
Sbjct: 321 TEKKFLGQPLDLSLQMKGEDRPIS-FVREEDRDDKRRRAEFILRQCMENPVDLNQ 352

[Close]

BLAST of Sed0004520 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 159.8 bits (403), Expect = 3.8e-39
Identity = 124/366 (33.88%), Postives = 186/366 (50.82%), Query Frame = 0


Query: 10  DFTRALSKIAVAQICES------------EG--FQSFQQSALETFTDITVGYLQNLGKIA 69
           DF  +++++AVAQICES            EG  F SFQ+SAL+T TD+ V Y+Q++GK A
Sbjct: 42  DFAFSIARMAVAQICESVEVNPYQESQTREGVRFSSFQESALDTLTDVAVQYIQSIGKTA 101

Query: 70  NLCSNFAGRTECNVFDVIQALEDLGSVQGF------EHCLASSSTVKEIACFVAQAEEIP 129
           +L +N AGR + N  D++QALEDLGS  GF      +HCLA S  VK+I  +  +AEEIP
Sbjct: 102 HLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSDTDHCLADSGVVKDIIRYTGEAEEIP 161

Query: 130 FAFAVPEFTVVRERKPKPTFLHIGEEPPGKHIPSWLPALPDPDMYIPSRTVKS---EPEK 189
           F +++P F   +E+KP P+F  +G EPP +HIP WLPA P+ ++   S    +   E E 
Sbjct: 162 FVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVWLPAFPETELCDRSEETNAATIEGEI 221

Query: 190 QCKGAEQSLWNLQKWLFFKELEGSRREGPRNA----AMTKQTQGSNPFLAPPLDFGVKEV 249
             K    SL ++Q  L F    G R E  +++      T+     N FL  PL F  K V
Sbjct: 222 PSKENGSSLPSMQ--LSFD--GGGRLEIHKSSKDVGESTEAVVEGNLFLTAPLRFVEKNV 281

Query: 250 SSVDLPEKILNN--SSTEFP-VLISENCLVSVLETFAPAIE-------SIKNNLSEEKFS 309
           S V  P ++ N    +   P   +  N  + +LE  AP+ +       +I  ++ +   +
Sbjct: 282 SPVVRPLELSNEVVRTNHVPDKHVRNNHHIPILEASAPSDKINNKNWLAISKDVEKVDVA 341

Query: 310 LNGRSTLQFKIRTGKKPVGNRIESRALNNGVKNSSSWFVGVDGKDDKKRKAEKILKDSME 339
               + ++FKI T K+ +          N       WF      +DK+ K  +I +    
Sbjct: 342 RKELTLVRFKIGTTKRSM------CLAKNRSFQEEGWF---QEGEDKREKTSEIKEKRER 394

[Close]

BLAST of Sed0004520 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-17
Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 0


Query: 6   SGSEDFTRALSKIAVAQICESEGFQSFQQSALETFTDITVGYLQNLGKIANLCSNFAGRT 65
           + + +F+ +L+KIAV+QIC+S G+++   SAL T T  T  +LQ+L ++A+  SN A RT
Sbjct: 21  TSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRT 80

Query: 66  ECNVFDVIQALEDL-----------GSVQGFE-HCLASSSTVKEIACFVAQAEEIPFAFA 125
           E N+FD++  L+D+            +V   E  CL  S+ ++ ++ FV  A EIPFA  
Sbjct: 81  EVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKP 140

Query: 126 VPEFTVVRERKPK----PTFLHIGEEPPGKHIPSWLPALPDPDM 154
           +P     RER          + +        +P+WLP  PD  +
Sbjct: 141 LPR----RERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPDSSL 180

The following BLAST results are available for this feature:

BLAST of Sed0004520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538136.1	1.7e-142	75.83	transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo...	[more]
KAG7033206.1	2.2e-142	76.11	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
KAG6602532.1	2.2e-142	76.11	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
XP_022990062.1	4.9e-142	76.11	transcription initiation factor TFIID subunit 8-like [Cucurbita maxima]	[more]
XP_022921494.1	5.5e-141	75.83	transcription initiation factor TFIID subunit 8-like [Cucurbita moschata]	[more]

BLAST of Sed0004520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	2.3e-41	36.62	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5VWG9	3.3e-08	28.67	Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 ...	[more]
Q5HZG4	7.4e-08	28.67	Transcription initiation factor TFIID subunit 3 OS=Mus musculus OX=10090 GN=Taf3...	[more]
Q5F489	3.7e-07	27.97	Transcription initiation factor TFIID subunit 3 OS=Gallus gallus OX=9031 GN=TAF3...	[more]
Q7ZYA2	3.5e-05	24.16	Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf...	[more]

BLAST of Sed0004520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHK2	2.4e-142	76.11	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E0M7	2.6e-141	75.83	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0KSJ1	3.9e-137	72.70	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A1S3CA13	9.7e-136	72.42	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3BLI6	4.8e-135	72.14	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Sed0004520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15570.1	7.3e-43	35.14	Bromodomain transcription factor	[more]
AT4G34340.1	1.6e-42	36.62	TBP-associated factor 8	[more]
AT3G02160.1	3.8e-39	33.88	Bromodomain transcription factor	[more]
AT1G31240.1	1.8e-17	33.54	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 9..85 e-value: 2.0E-27 score: 107.1
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 11..80 e-value: 8.4E-21 score: 73.8
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 4..95 e-value: 9.3E-23 score: 81.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 14..80
None	No IPR available	PANTHER	PTHR46338:SF7	BROMODOMAIN TRANSCRIPTION FACTOR	coord: 4..339
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 4..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004520.1	Sed0004520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity