Sed0004478 (gene) Chayote v1

Overview


Name	Sed0004478
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein LURP-one-related 17-like
Location	LG07: 12901539 .. 12902457 (+)
RNA-Seq Expression	Sed0004478
Synteny	Sed0004478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAATTTACCAATATGCCCTTCTTCAAATCTTGTTCTTCCAGAGCCGTGCACCACCAATCCCCGCCGGCGGAGGAGGTCAGAGACGGCGGTGCGTGTGTCTCACTCACGGTGTGGCGGAAGTCACTGCTACTCACCTGCCGCGGATTCACCGTCATCGACCGAACCGGCAACATCGTATACAGAGTCGACAGCTACACCGATCGCCCCGAGGAATTGACTCTCATGGACGCCCTCGGCAGATCCGTCCTCACAATGCGCCGATCCAAGGTCAGTCCACTTCTTCGTCTAATCGAATTCCGATGTTCACATCTTCACGGATCCCTCTGATTTTGCGATTTGATTTTGATACAGAAGCTCGGATTCGCAGAGAACTGGCGCGTGTACGAAGGGGAAGAAGTTAGGGCTAGAAACAAACCGATGTGTCGCGTGAGGAAGAACAAGAACATTCTACATGTCGCTCCGAGTAATTCGAAAGCGATTGCGTACGTATACGATTACAGAATCTCGGAGAAGAAGTATGCGTACTGTGTTGAAGGATCGTATAAGGAGCGGTCGTGCAAGGTTTTGGACGCGGCGGGGAGAGTGGTGGCGGAGGTGAAGAGGAAGGAGGCGGTTAACGGCGGCGTTTGTTTTGGGGCGGAGGTTTTTGTTTTGGTGATTTTTCCTGGTTTCGATTGTGATTTGGCTATGGCTCTGCTTTTACTTCTAGATCAAATGTTTTCTTAGAATTTGAATTATATTTTTCTTCTTCTTTTGTTACTGTGTATATTTTTTCTGAAGCTGCGCTTTGATTTTGAAAGGGATTTGTTTCCTTTTCAAGTAAAGAGTGTATGATACTGCTTTTTTCTTTAGAGTAATATTGATTCTGGAGATGGAACTTACGACGCTGGTGTTAAACGTTTGAGTGTATGATATTG

mRNA sequence

ACTAATTTACCAATATGCCCTTCTTCAAATCTTGTTCTTCCAGAGCCGTGCACCACCAATCCCCGCCGGCGGAGGAGGTCAGAGACGGCGGTGCGTGTGTCTCACTCACGGTGTGGCGGAAGTCACTGCTACTCACCTGCCGCGGATTCACCGTCATCGACCGAACCGGCAACATCGTATACAGAGTCGACAGCTACACCGATCGCCCCGAGGAATTGACTCTCATGGACGCCCTCGGCAGATCCGTCCTCACAATGCGCCGATCCAAGAAGCTCGGATTCGCAGAGAACTGGCGCGTGTACGAAGGGGAAGAAGTTAGGGCTAGAAACAAACCGATGTGTCGCGTGAGGAAGAACAAGAACATTCTACATGTCGCTCCGAGTAATTCGAAAGCGATTGCGTACGTATACGATTACAGAATCTCGGAGAAGAAGTATGCGTACTGTGTTGAAGGATCGTATAAGGAGCGGTCGTGCAAGGTTTTGGACGCGGCGGGGAGAGTGGTGGCGGAGGTGAAGAGGAAGGAGGCGGTTAACGGCGGCGTTTGTTTTGGGGCGGAGGTTTTTGTTTTGGTGATTTTTCCTGGTTTCGATTGTGATTTGGCTATGGCTCTGCTTTTACTTCTAGATCAAATGTTTTCTTAGAATTTGAATTATATTTTTCTTCTTCTTTTGTTACTGTGTATATTTTTTCTGAAGCTGCGCTTTGATTTTGAAAGGGATTTGTTTCCTTTTCAAGTAAAGAGTGTATGATACTGCTTTTTTCTTTAGAGTAATATTGATTCTGGAGATGGAACTTACGACGCTGGTGTTAAACGTTTGAGTGTATGATATTG

Coding sequence (CDS)

ATGCCCTTCTTCAAATCTTGTTCTTCCAGAGCCGTGCACCACCAATCCCCGCCGGCGGAGGAGGTCAGAGACGGCGGTGCGTGTGTCTCACTCACGGTGTGGCGGAAGTCACTGCTACTCACCTGCCGCGGATTCACCGTCATCGACCGAACCGGCAACATCGTATACAGAGTCGACAGCTACACCGATCGCCCCGAGGAATTGACTCTCATGGACGCCCTCGGCAGATCCGTCCTCACAATGCGCCGATCCAAGAAGCTCGGATTCGCAGAGAACTGGCGCGTGTACGAAGGGGAAGAAGTTAGGGCTAGAAACAAACCGATGTGTCGCGTGAGGAAGAACAAGAACATTCTACATGTCGCTCCGAGTAATTCGAAAGCGATTGCGTACGTATACGATTACAGAATCTCGGAGAAGAAGTATGCGTACTGTGTTGAAGGATCGTATAAGGAGCGGTCGTGCAAGGTTTTGGACGCGGCGGGGAGAGTGGTGGCGGAGGTGAAGAGGAAGGAGGCGGTTAACGGCGGCGTTTGTTTTGGGGCGGAGGTTTTTGTTTTGGTGATTTTTCCTGGTTTCGATTGTGATTTGGCTATGGCTCTGCTTTTACTTCTAGATCAAATGTTTTCTTAG

Protein sequence

MPFFKSCSSRAVHHQSPPAEEVRDGGACVSLTVWRKSLLLTCRGFTVIDRTGNIVYRVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS

Homology

[Close]

BLAST of Sed0004478 vs. NCBI nr
Match: XP_022982692.1 (protein LURP-one-related 17-like [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 163/218 (74.77%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVR------DGGACVSLTVWRKSLLLTCRGFTVIDRTGNI 60
           M FFKS SS AVH +S P EEV+      DGGAC+SLTVWRKSLLLTC GFTVIDR+GNI
Sbjct: 1   MLFFKS-SSGAVHQESQPQEEVKRCGGGGDGGACISLTVWRKSLLLTCNGFTVIDRSGNI 60

Query: 61  VYRVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMCRV 120
           VYRVD+Y  RPEE+TLMD LG+SVLTM RSKKLG AENW VYEGE   E+RAR  P+CRV
Sbjct: 61  VYRVDNYIGRPEEVTLMDGLGKSVLTMCRSKKLGIAENWCVYEGEVGREIRARKNPICRV 120

Query: 121 RKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKRKE 180
           RKN NILHVAP NSK +AYVYDYRIS+KKYAY +EGSY +RSCKVLDA+ RVVAEV+RKE
Sbjct: 121 RKNMNILHVAP-NSKVLAYVYDYRISDKKYAYSIEGSYGQRSCKVLDASRRVVAEVRRKE 180

Query: 181 AVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
            + GGVCFGAEVF+L++ PGFD  LAMAL+LLLDQMFS
Sbjct: 181 PIKGGVCFGAEVFLLLVLPGFDSGLAMALVLLLDQMFS 216

[Close]

BLAST of Sed0004478 vs. NCBI nr
Match: XP_023535240.1 (protein LURP-one-related 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 8.7e-81
Identity = 161/218 (73.85%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVR------DGGACVSLTVWRKSLLLTCRGFTVIDRTGNI 60
           M FFKS SS AVH +S P EEV+      DGGAC+SLTVWRKSLLLTC GFTVIDR+GNI
Sbjct: 1   MLFFKS-SSGAVHQESQPQEEVKRCGGGGDGGACISLTVWRKSLLLTCNGFTVIDRSGNI 60

Query: 61  VYRVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMCRV 120
           VYRVD+Y  RPEE+ LMD LG+SVLTM RSKKLG AENW VYEGE   ++RAR  P+CRV
Sbjct: 61  VYRVDNYIGRPEEVILMDGLGKSVLTMCRSKKLGIAENWCVYEGEVGGKIRARKNPICRV 120

Query: 121 RKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKRKE 180
           RKN NILHVAP NSK +AYVYDYRIS+KKYAY +EGSY +RSCK+LDA+ RVVAEV+RKE
Sbjct: 121 RKNMNILHVAP-NSKVLAYVYDYRISDKKYAYSIEGSYGQRSCKILDASRRVVAEVRRKE 180

Query: 181 AVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
            +NGGVCFGAEVF+L++ PGFD  LAMAL+LLLDQMFS
Sbjct: 181 PINGGVCFGAEVFLLLVLPGFDSGLAMALVLLLDQMFS 216

[Close]

BLAST of Sed0004478 vs. NCBI nr
Match: XP_022942383.1 (protein LURP-one-related 17-like [Cucurbita moschata])

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-80
Identity = 162/220 (73.64%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVR--------DGGACVSLTVWRKSLLLTCRGFTVIDRTG 60
           M FFKS SS AVH +S P EEV+        D GACVSLTVWRKSLLLTC GFTVIDR+G
Sbjct: 1   MLFFKS-SSGAVHQESQPQEEVKGCGGGGGGDSGACVSLTVWRKSLLLTCNGFTVIDRSG 60

Query: 61  NIVYRVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMC 120
           NIVYRVD+Y  RPEE+ LMD LG+SVLTM RSKKLG AENW VYEGE   E+RAR  P+C
Sbjct: 61  NIVYRVDNYIGRPEEVILMDGLGKSVLTMCRSKKLGIAENWCVYEGEVGREIRARKNPIC 120

Query: 121 RVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKR 180
           RVRKN NILHVAP NSK +AYVYDYRIS+KKYAY +EGSY +RSCK+LDA+ RVVAEV+R
Sbjct: 121 RVRKNMNILHVAP-NSKVLAYVYDYRISDKKYAYSIEGSYGQRSCKILDASRRVVAEVRR 180

Query: 181 KEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           KE +NGGVCFGAEVF+L++ PGFD  LAMAL+LLLDQMFS
Sbjct: 181 KEPINGGVCFGAEVFLLLVLPGFDSGLAMALVLLLDQMFS 218

[Close]

BLAST of Sed0004478 vs. NCBI nr
Match: XP_038900421.1 (protein LURP-one-related 17 [Benincasa hispida])

HSP 1 Score: 308.9 bits (790), Expect = 3.3e-80
Identity = 167/216 (77.31%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVRDGGA----CVSLTVWRKSLLLTCRGFTVIDRTGNIVY 60
           M FFKS SS AVH +S P E+V  GGA     VSLTVWRKSLLLTC GFTVIDR GNIVY
Sbjct: 1   MLFFKS-SSGAVHQESQPPEDVERGGAGSGPSVSLTVWRKSLLLTCNGFTVIDRNGNIVY 60

Query: 61  RVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMCRVRK 120
           RVD+YT+RPEE+ LMD LG SVLTM RSKKLG  ENW VYEGE   E RAR KP+CRVRK
Sbjct: 61  RVDNYTERPEEIILMDGLGESVLTMCRSKKLGLGENWCVYEGEVEGETRARKKPICRVRK 120

Query: 121 NKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKRKEAV 180
           N NILHVAP N+K +AYVYDYRISEKK+AY VEGSY  RSCKVLDA+ RVVAEVKRKEAV
Sbjct: 121 NMNILHVAP-NTKVLAYVYDYRISEKKHAYSVEGSYGHRSCKVLDASRRVVAEVKRKEAV 180

Query: 181 NGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           NGGVCFGAEVF+LVI PGFD  LAMAL+LLLDQMFS
Sbjct: 181 NGGVCFGAEVFLLVILPGFDPGLAMALVLLLDQMFS 214

[Close]

BLAST of Sed0004478 vs. NCBI nr
Match: KAG6600546.1 (Protein LURP-one-related 17, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031185.1 Protein LURP-one-related 17, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.5 bits (789), Expect = 4.3e-80
Identity = 162/220 (73.64%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVR--------DGGACVSLTVWRKSLLLTCRGFTVIDRTG 60
           M FFKS SS AVH +S P EEV+        D GACVSLTVWRKSLLLTC GFTVIDR+G
Sbjct: 1   MLFFKS-SSGAVHQESQPQEEVKGCGGGGGGDSGACVSLTVWRKSLLLTCNGFTVIDRSG 60

Query: 61  NIVYRVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMC 120
           NIVYRVD+Y  RPEE+ LMD LG+SVLTM RSKKLG AENW VYEGE   ++RAR  P+C
Sbjct: 61  NIVYRVDNYIGRPEEVILMDGLGKSVLTMCRSKKLGIAENWCVYEGEVGGKIRARKNPIC 120

Query: 121 RVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKR 180
           RVRKN NILHVAP NSK +AYVYDYRIS+KKYAY +EGSY +RSCKVLDA+ RVVAEV+R
Sbjct: 121 RVRKNMNILHVAP-NSKVLAYVYDYRISDKKYAYSIEGSYGQRSCKVLDASRRVVAEVRR 180

Query: 181 KEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           KE +NGGVCFGAEVF+L++ PGFD  LAMAL+LLLDQMFS
Sbjct: 181 KEPINGGVCFGAEVFLLLVLPGFDSGLAMALVLLLDQMFS 218

[Close]

BLAST of Sed0004478 vs. ExPASy Swiss-Prot
Match: A0MFL4 (Protein LURP-one-related 17 OS=Arabidopsis thaliana OX=3702 GN=At5g41590 PE=2 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-43
Identity = 102/222 (45.95%), Postives = 140/222 (63.06%), Query Frame = 0


Query: 2   PFFKSCSSRAVHHQSPPAEEVRD--------GGACVSLTVWRKSLLLTCRGFTVIDRTGN 61
           PF K   SR+VH +  P+             GGAC +LTVWRKSLL++C GFTVID  G+
Sbjct: 3   PFLKQ-RSRSVHGEDAPSSTESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSNGD 62

Query: 62  IVYRVDSYT-DRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGEEVRARNK----PM 121
           ++YRVD+Y   RPEEL LMD  G S+L M R+KK+   ++W +YE  + +   K    P 
Sbjct: 63  LIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKITLVDSWGIYEANDTKGETKIPKCPT 122

Query: 122 CRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDA-AGRVVAEV 181
             +RKN   +++  + S  +AYVY     +KK +Y ++GSY+ +SCK++     + V E+
Sbjct: 123 WYMRKNLK-MNILSTKSDILAYVYSGSF-DKKNSYIIKGSYRCKSCKIVHVPLNKTVVEI 182

Query: 182 KRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           KRKE    GV FG++VF LV+ PGFD  LAMAL+LLLDQMFS
Sbjct: 183 KRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALVLLLDQMFS 221

[Close]

BLAST of Sed0004478 vs. ExPASy Swiss-Prot
Match: Q9ZVI6 (Protein LURP-one-related 8 OS=Arabidopsis thaliana OX=3702 GN=At2g38640 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 89/202 (44.06%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 12  VHHQSPPA--EEVRDGGACVSLTVWRKSLLLTCRGFTVIDRTGNIVYRVDSYTDRP-EEL 71
           VH + P    E + D  A V LTVW+KSLL  C GFTV +  G +V+RVD+Y + P + +
Sbjct: 4   VHPKFPSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNI 63

Query: 72  TLMDALGRSVLTMRRSKKLGFAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAI 131
            LMDA G  +L++RR KKL   + W VY+GE  R    P+   RKN +I+    SN K++
Sbjct: 64  VLMDASGFPLLSIRR-KKLSLGDCWMVYDGETER---DPIFTARKNVSII----SNRKSL 123

Query: 132 AYVYDYRISEKKYAYCVEGSYKERSCKVLDAA--GRVVAEVKRKEAVNGGVCFGAEVFVL 191
           A+V     ++K   Y +EGSY +RSCK+LD     +  AE+KRKE V GGV FG +V+ L
Sbjct: 124 AWV----SAKKTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKL 183

Query: 192 VIFPGFDCDLAMALLLLLDQMF 209
           ++    +  +AMAL ++LDQMF
Sbjct: 184 IVESEMEPRVAMALTIILDQMF 193

[Close]

BLAST of Sed0004478 vs. ExPASy Swiss-Prot
Match: Q9SSC7 (Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-22
Identity = 75/184 (40.76%), Postives = 105/184 (57.07%), Query Frame = 0


Query: 30  SLTVWRKSLLLTCRGFTVIDRTGNIVYRVDSY----TDRPEELTLMDALGRSVLTMRRSK 89
           SLTV + SL     GFTV D  G++V+RVDSY    T   +E+ LMDA GR +LT+RR K
Sbjct: 18  SLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRR-K 77

Query: 90  KLGFAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCV 149
           +      W  Y GE    + KP+  VR++     +   NS  +    DY+ SE    Y +
Sbjct: 78  RPSLRRRWEGYLGERSDGQ-KPIFGVRRSS----IIGRNSVTVEVYGDYQCSE----YLI 137

Query: 150 EGSYKERSCKVLDA-AGRVVAEVKRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLL 209
           EGS+  R+C V++A   R VAE++RK   +  V  G +VF L + PGFD   AM L+L+L
Sbjct: 138 EGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVL 191

[Close]

BLAST of Sed0004478 vs. ExPASy Swiss-Prot
Match: Q9LVZ8 (Protein LURP-one-related 12 OS=Arabidopsis thaliana OX=3702 GN=At3g15810 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.5e-19
Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 31  LTVWRKSLLLTCRGFTVIDRTGNIVYRVDSY---TDRPEELTLMDALGRSVLTMRRSKKL 90
           LTV + SL  T  GF   D  G+I++RVDSY   T   +E+ LMDA G+ +LT++R K+ 
Sbjct: 33  LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKR-KRP 92

Query: 91  GFAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEG 150
              + W  + GE    + KP+  VR++  I             VYD    E    Y ++G
Sbjct: 93  TLHQRWEGFLGERSEGQ-KPIFSVRRSSII-----GRCTMEVEVYDGTGEE----YIIDG 152

Query: 151 SYKERSCKVLDAAGRVVAEVKRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQM 208
            + +RSC + D     VAE+KRK   +  V  G +VF L I PGFD   AM L+++LDQ+
Sbjct: 153 DFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQI 201

[Close]

BLAST of Sed0004478 vs. ExPASy Swiss-Prot
Match: Q9LUM1 (Protein LURP-one-related 11 OS=Arabidopsis thaliana OX=3702 GN=At3g14260 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 0


Query: 30  SLTVWRKSLLLTCRGFTVIDRTGNIVYRVDSYTDRP-EELTLMDALGRSVLTMRRSKKLG 89
           S T+W KSL+    G TV D  GNI+YRVD+Y  +   E+ LMD  G  + T+RR +K G
Sbjct: 50  SFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYNSKSCREVYLMDLSGHVLFTLRR-QKFG 109

Query: 90  FAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGS 149
             + W  Y        +       + KN +   P+   + +Y  +         YC +  
Sbjct: 110 LFKTWEGYRSSSATVESTTKLEYFRVKNNVFQVPNKDSSSSYRVNAGSCRNDEQYCYKMV 169

Query: 150 YKERSCKVLDAAGRVVAEVKRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLL 203
            +  S  + D  G+++AEVKRK+++N G+  G +V  +++    D    + L+L
Sbjct: 170 TRGSSLAIEDNCGKLLAEVKRKQSIN-GLKLGDDVLTMMVESQVDHSFIIGLVL 221

[Close]

BLAST of Sed0004478 vs. ExPASy TrEMBL
Match: A0A6J1IX94 (protein LURP-one-related 17-like OS=Cucurbita maxima OX=3661 GN=LOC111481485 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 163/218 (74.77%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVR------DGGACVSLTVWRKSLLLTCRGFTVIDRTGNI 60
           M FFKS SS AVH +S P EEV+      DGGAC+SLTVWRKSLLLTC GFTVIDR+GNI
Sbjct: 1   MLFFKS-SSGAVHQESQPQEEVKRCGGGGDGGACISLTVWRKSLLLTCNGFTVIDRSGNI 60

Query: 61  VYRVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMCRV 120
           VYRVD+Y  RPEE+TLMD LG+SVLTM RSKKLG AENW VYEGE   E+RAR  P+CRV
Sbjct: 61  VYRVDNYIGRPEEVTLMDGLGKSVLTMCRSKKLGIAENWCVYEGEVGREIRARKNPICRV 120

Query: 121 RKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKRKE 180
           RKN NILHVAP NSK +AYVYDYRIS+KKYAY +EGSY +RSCKVLDA+ RVVAEV+RKE
Sbjct: 121 RKNMNILHVAP-NSKVLAYVYDYRISDKKYAYSIEGSYGQRSCKVLDASRRVVAEVRRKE 180

Query: 181 AVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
            + GGVCFGAEVF+L++ PGFD  LAMAL+LLLDQMFS
Sbjct: 181 PIKGGVCFGAEVFLLLVLPGFDSGLAMALVLLLDQMFS 216

[Close]

BLAST of Sed0004478 vs. ExPASy TrEMBL
Match: A0A6J1FUP2 (protein LURP-one-related 17-like OS=Cucurbita moschata OX=3662 GN=LOC111447443 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.4e-81
Identity = 162/220 (73.64%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVR--------DGGACVSLTVWRKSLLLTCRGFTVIDRTG 60
           M FFKS SS AVH +S P EEV+        D GACVSLTVWRKSLLLTC GFTVIDR+G
Sbjct: 1   MLFFKS-SSGAVHQESQPQEEVKGCGGGGGGDSGACVSLTVWRKSLLLTCNGFTVIDRSG 60

Query: 61  NIVYRVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMC 120
           NIVYRVD+Y  RPEE+ LMD LG+SVLTM RSKKLG AENW VYEGE   E+RAR  P+C
Sbjct: 61  NIVYRVDNYIGRPEEVILMDGLGKSVLTMCRSKKLGIAENWCVYEGEVGREIRARKNPIC 120

Query: 121 RVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKR 180
           RVRKN NILHVAP NSK +AYVYDYRIS+KKYAY +EGSY +RSCK+LDA+ RVVAEV+R
Sbjct: 121 RVRKNMNILHVAP-NSKVLAYVYDYRISDKKYAYSIEGSYGQRSCKILDASRRVVAEVRR 180

Query: 181 KEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           KE +NGGVCFGAEVF+L++ PGFD  LAMAL+LLLDQMFS
Sbjct: 181 KEPINGGVCFGAEVFLLLVLPGFDSGLAMALVLLLDQMFS 218

[Close]

BLAST of Sed0004478 vs. ExPASy TrEMBL
Match: A0A6J1EZ84 (protein LURP-one-related 17 OS=Cucurbita moschata OX=3662 GN=LOC111437572 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.2e-77
Identity = 163/216 (75.46%), Postives = 176/216 (81.48%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVRDGG----ACVSLTVWRKSLLLTCRGFTVIDRTGNIVY 60
           M FFKS SS AVH +S PAEEV+ GG    A VSLTVWRKSLL+TC GFTVID  GNIVY
Sbjct: 1   MLFFKS-SSGAVHQESQPAEEVKRGGDGAAAIVSLTVWRKSLLVTCNGFTVIDCNGNIVY 60

Query: 61  RVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRARNKPMCRVRK 120
           RVD+Y+ RPEE+ LMD LG SVLTM RSKKLG AENW VYEGE   E RAR KP+CRVRK
Sbjct: 61  RVDNYSGRPEEVILMDGLGNSVLTMCRSKKLGLAENWCVYEGEVGGETRARKKPICRVRK 120

Query: 121 NKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKRKEAV 180
           N NILHVAP N+K +AYVYDY  SEKKYAY VEGSY +RSCKVLDA+  VVAEVKRKEAV
Sbjct: 121 NMNILHVAP-NAKVLAYVYDYGTSEKKYAYSVEGSYGQRSCKVLDASRTVVAEVKRKEAV 180

Query: 181 NGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
            GGVCFGAEVF+LVI PGFD  LAMAL+L LDQMFS
Sbjct: 181 KGGVCFGAEVFLLVILPGFDPGLAMALVLALDQMFS 214

[Close]

BLAST of Sed0004478 vs. ExPASy TrEMBL
Match: A0A6J1C4N1 (protein LURP-one-related 17 OS=Momordica charantia OX=3673 GN=LOC111008235 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.1e-76
Identity = 160/219 (73.06%), Postives = 175/219 (79.91%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEV-RDGGACVSLTVWRKSLLLTCRGFTVIDRTGNIVYRVD 60
           M FFKS SS AVH +S PAEEV R GGACV+LTVWRKSLLLTC GFTVIDR GNIVYRVD
Sbjct: 1   MFFFKS-SSGAVHEESQPAEEVKRGGGACVTLTVWRKSLLLTCNGFTVIDRNGNIVYRVD 60

Query: 61  SYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---------EVRARNKPMCR 120
           +Y +RPEE+ LMD LG+SVLTM RS +LG AE+W V EGE           RAR KP+ R
Sbjct: 61  NYVERPEEMILMDGLGKSVLTMCRSMRLGLAESWCVNEGEIGGETRARARERARKKPIFR 120

Query: 121 VRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAGRVVAEVKRK 180
           VRKN NILH AP NSK +AYVYDYRISEKK AY VEGSY  RSCK+LDA+ RVVAEVKRK
Sbjct: 121 VRKNMNILHAAP-NSKVLAYVYDYRISEKKLAYRVEGSYGHRSCKILDASRRVVAEVKRK 180

Query: 181 EAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           EAV GGVCFGAEVF+LV+ PGFD   AMAL+LLLDQMFS
Sbjct: 181 EAVKGGVCFGAEVFLLVVLPGFDPGFAMALVLLLDQMFS 217

[Close]

BLAST of Sed0004478 vs. ExPASy TrEMBL
Match: A0A5D3CYN1 (Protein LURP-one-related 17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004430 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.7e-74
Identity = 162/218 (74.31%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 1   MPFFKSCSSRAVHHQSPPAEEVRDGGAC----VSLTVWRKSLLLTCRGFTVIDRTGNIVY 60
           M FFKS  SRAVH +S   EE+++ GA     VSLTVWRKSLLLTC GFTVIDR GNIVY
Sbjct: 1   MLFFKSL-SRAVHQESQSPEELKETGAVSGSPVSLTVWRKSLLLTCNGFTVIDRNGNIVY 60

Query: 61  RVDSYTDRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGE---EVRAR-NKPMCRVR 120
           RVD+YT RPEE+ LMD LG+SVLTM RSKKLG  ENW VYEGE   + R R NKP+CRV+
Sbjct: 61  RVDNYTGRPEEMILMDGLGKSVLTMCRSKKLGLGENWCVYEGEVEGKTRGRKNKPICRVK 120

Query: 121 KNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDAAG-RVVAEVKRKE 180
           KN NILHV P N+K +AYVYDYRIS+KKYAY VEGSY ERSCKVLDAA  RVVAEVKRKE
Sbjct: 121 KNINILHVDP-NAKVLAYVYDYRISKKKYAYSVEGSYGERSCKVLDAASRRVVAEVKRKE 180

Query: 181 AVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           AV GGV FGAEVF+LVI PGFD  LAMAL+LLLDQMFS
Sbjct: 181 AVKGGVGFGAEVFLLVIVPGFDSGLAMALVLLLDQMFS 216

[Close]

BLAST of Sed0004478 vs. TAIR 10
Match: AT5G41590.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-44
Identity = 102/222 (45.95%), Postives = 140/222 (63.06%), Query Frame = 0


Query: 2   PFFKSCSSRAVHHQSPPAEEVRD--------GGACVSLTVWRKSLLLTCRGFTVIDRTGN 61
           PF K   SR+VH +  P+             GGAC +LTVWRKSLL++C GFTVID  G+
Sbjct: 3   PFLKQ-RSRSVHGEDAPSSTESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSNGD 62

Query: 62  IVYRVDSYT-DRPEELTLMDALGRSVLTMRRSKKLGFAENWRVYEGEEVRARNK----PM 121
           ++YRVD+Y   RPEEL LMD  G S+L M R+KK+   ++W +YE  + +   K    P 
Sbjct: 63  LIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKITLVDSWGIYEANDTKGETKIPKCPT 122

Query: 122 CRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGSYKERSCKVLDA-AGRVVAEV 181
             +RKN   +++  + S  +AYVY     +KK +Y ++GSY+ +SCK++     + V E+
Sbjct: 123 WYMRKNLK-MNILSTKSDILAYVYSGSF-DKKNSYIIKGSYRCKSCKIVHVPLNKTVVEI 182

Query: 182 KRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQMFS 210
           KRKE    GV FG++VF LV+ PGFD  LAMAL+LLLDQMFS
Sbjct: 183 KRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALVLLLDQMFS 221

[Close]

BLAST of Sed0004478 vs. TAIR 10
Match: AT2G38640.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 141.4 bits (355), Expect = 8.5e-34
Identity = 89/202 (44.06%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 12  VHHQSPPA--EEVRDGGACVSLTVWRKSLLLTCRGFTVIDRTGNIVYRVDSYTDRP-EEL 71
           VH + P    E + D  A V LTVW+KSLL  C GFTV +  G +V+RVD+Y + P + +
Sbjct: 4   VHPKFPSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNI 63

Query: 72  TLMDALGRSVLTMRRSKKLGFAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAI 131
            LMDA G  +L++RR KKL   + W VY+GE  R    P+   RKN +I+    SN K++
Sbjct: 64  VLMDASGFPLLSIRR-KKLSLGDCWMVYDGETER---DPIFTARKNVSII----SNRKSL 123

Query: 132 AYVYDYRISEKKYAYCVEGSYKERSCKVLDAA--GRVVAEVKRKEAVNGGVCFGAEVFVL 191
           A+V     ++K   Y +EGSY +RSCK+LD     +  AE+KRKE V GGV FG +V+ L
Sbjct: 124 AWV----SAKKTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKL 183

Query: 192 VIFPGFDCDLAMALLLLLDQMF 209
           ++    +  +AMAL ++LDQMF
Sbjct: 184 IVESEMEPRVAMALTIILDQMF 193

[Close]

BLAST of Sed0004478 vs. TAIR 10
Match: AT1G80120.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-23
Identity = 75/184 (40.76%), Postives = 105/184 (57.07%), Query Frame = 0


Query: 30  SLTVWRKSLLLTCRGFTVIDRTGNIVYRVDSY----TDRPEELTLMDALGRSVLTMRRSK 89
           SLTV + SL     GFTV D  G++V+RVDSY    T   +E+ LMDA GR +LT+RR K
Sbjct: 18  SLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRR-K 77

Query: 90  KLGFAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCV 149
           +      W  Y GE    + KP+  VR++     +   NS  +    DY+ SE    Y +
Sbjct: 78  RPSLRRRWEGYLGERSDGQ-KPIFGVRRSS----IIGRNSVTVEVYGDYQCSE----YLI 137

Query: 150 EGSYKERSCKVLDA-AGRVVAEVKRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLL 209
           EGS+  R+C V++A   R VAE++RK   +  V  G +VF L + PGFD   AM L+L+L
Sbjct: 138 EGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVL 191

[Close]

BLAST of Sed0004478 vs. TAIR 10
Match: AT3G15810.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 95.5 bits (236), Expect = 5.3e-20
Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 31  LTVWRKSLLLTCRGFTVIDRTGNIVYRVDSY---TDRPEELTLMDALGRSVLTMRRSKKL 90
           LTV + SL  T  GF   D  G+I++RVDSY   T   +E+ LMDA G+ +LT++R K+ 
Sbjct: 33  LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKR-KRP 92

Query: 91  GFAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEG 150
              + W  + GE    + KP+  VR++  I             VYD    E    Y ++G
Sbjct: 93  TLHQRWEGFLGERSEGQ-KPIFSVRRSSII-----GRCTMEVEVYDGTGEE----YIIDG 152

Query: 151 SYKERSCKVLDAAGRVVAEVKRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLLLLDQM 208
            + +RSC + D     VAE+KRK   +  V  G +VF L I PGFD   AM L+++LDQ+
Sbjct: 153 DFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQI 201

[Close]

BLAST of Sed0004478 vs. TAIR 10
Match: AT3G14260.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 0


Query: 30  SLTVWRKSLLLTCRGFTVIDRTGNIVYRVDSYTDRP-EELTLMDALGRSVLTMRRSKKLG 89
           S T+W KSL+    G TV D  GNI+YRVD+Y  +   E+ LMD  G  + T+RR +K G
Sbjct: 50  SFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYNSKSCREVYLMDLSGHVLFTLRR-QKFG 109

Query: 90  FAENWRVYEGEEVRARNKPMCRVRKNKNILHVAPSNSKAIAYVYDYRISEKKYAYCVEGS 149
             + W  Y        +       + KN +   P+   + +Y  +         YC +  
Sbjct: 110 LFKTWEGYRSSSATVESTTKLEYFRVKNNVFQVPNKDSSSSYRVNAGSCRNDEQYCYKMV 169

Query: 150 YKERSCKVLDAAGRVVAEVKRKEAVNGGVCFGAEVFVLVIFPGFDCDLAMALLL 203
            +  S  + D  G+++AEVKRK+++N G+  G +V  +++    D    + L+L
Sbjct: 170 TRGSSLAIEDNCGKLLAEVKRKQSIN-GLKLGDDVLTMMVESQVDHSFIIGLVL 221

The following BLAST results are available for this feature:

BLAST of Sed0004478 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982692.1	2.3e-81	74.77	protein LURP-one-related 17-like [Cucurbita maxima]	[more]
XP_023535240.1	8.7e-81	73.85	protein LURP-one-related 17-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942383.1	1.9e-80	73.64	protein LURP-one-related 17-like [Cucurbita moschata]	[more]
XP_038900421.1	3.3e-80	77.31	protein LURP-one-related 17 [Benincasa hispida]	[more]
KAG6600546.1	4.3e-80	73.64	Protein LURP-one-related 17, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]

BLAST of Sed0004478 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MFL4	2.0e-43	45.95	Protein LURP-one-related 17 OS=Arabidopsis thaliana OX=3702 GN=At5g41590 PE=2 SV...	[more]
Q9ZVI6	1.2e-32	44.06	Protein LURP-one-related 8 OS=Arabidopsis thaliana OX=3702 GN=At2g38640 PE=2 SV=...	[more]
Q9SSC7	2.5e-22	40.76	Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=...	[more]
Q9LVZ8	7.5e-19	37.22	Protein LURP-one-related 12 OS=Arabidopsis thaliana OX=3702 GN=At3g15810 PE=2 SV...	[more]
Q9LUM1	1.7e-15	29.89	Protein LURP-one-related 11 OS=Arabidopsis thaliana OX=3702 GN=At3g14260 PE=2 SV...	[more]

BLAST of Sed0004478 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IX94	1.1e-81	74.77	protein LURP-one-related 17-like OS=Cucurbita maxima OX=3661 GN=LOC111481485 PE=...	[more]
A0A6J1FUP2	9.4e-81	73.64	protein LURP-one-related 17-like OS=Cucurbita moschata OX=3662 GN=LOC111447443 P...	[more]
A0A6J1EZ84	2.2e-77	75.46	protein LURP-one-related 17 OS=Cucurbita moschata OX=3662 GN=LOC111437572 PE=3 S...	[more]
A0A6J1C4N1	9.1e-76	73.06	protein LURP-one-related 17 OS=Momordica charantia OX=3673 GN=LOC111008235 PE=3 ...	[more]
A0A5D3CYN1	1.7e-74	74.31	Protein LURP-one-related 17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Sed0004478 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41590.1	1.4e-44	45.95	Protein of unknown function (DUF567)	[more]
AT2G38640.1	8.5e-34	44.06	Protein of unknown function (DUF567)	[more]
AT1G80120.1	1.8e-23	40.76	Protein of unknown function (DUF567)	[more]
AT3G15810.1	5.3e-20	37.22	Protein of unknown function (DUF567)	[more]
AT3G14260.1	1.2e-16	29.89	Protein of unknown function (DUF567)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007612	LURP-one-related	PFAM	PF04525	LOR	coord: 26..202 e-value: 4.4E-47 score: 160.1
IPR007612	LURP-one-related	PANTHER	PTHR31087	FAMILY NOT NAMED	coord: 21..208
IPR038595	LURP-one-related superfamily	GENE3D	2.40.160.200		coord: 26..209 e-value: 5.8E-46 score: 158.4
None	No IPR available	PANTHER	PTHR31087:SF14	PROTEIN LURP-ONE-RELATED 17	coord: 21..208
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 27..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004478.1	Sed0004478.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane