Sed0004474 (gene) Chayote v1

Overview


Name	Sed0004474
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LOB domain-containing protein
Location	LG14: 18051836 .. 18052910 (-)
RNA-Seq Expression	Sed0004474
Synteny	Sed0004474

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAACCTAACCACAGTTAAAATGAATTCCTTTATATCTATATATTCCCCTCTTCTTCATCTTCCTCAGATTGGTCTCTGAAACAAACAATAACCATGAGCTGCAACGGTTGCCGCGTTCTCCGTAAGGGCTGCACCGAATCCTGCATCCTCCGGCCTTGCTTGCAGTGGATCGGCACCGCCGAAGCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATCTCCTTCCTCTCCGCCGTTCCACATTCTCAAAGACCTTGTATGTATATGTATATTCTTTTTTCTCTTCCCTTTTCTTTTTTAATTTTGTTTTTTCCTTTTTATTTTCAGCTTTGTTTCAGTCTCTGTTATTCGAAGCCTGCGGCCGAACCGTCAACCCGGTCAACGGCGCCGTCGGTCTTCTCTGGACCGGCCACTGGCACATCTGCCAGGCCGCCGTCGACACCGTCTTGCGAGGCGGCACGTTGCGGCCTATCAACGAATTCATTGCCTCCGACCAGACTCATTCCGAGGCCGAAGTCGCCTATTCCGACATCTGGAAGCTTCCAGATTCCGTTCCCAGTTCTCGATTCTCCAATTCCCGGTCCAGGATCTCCCCCAAACTCAACGATCTTGATCTACGATTGACGCCGAATCTTCCCGCCAAAACAATCCGGCGAGCCGGTTCTCCCTCCATGAATTCCGACGAATCCGATTCCAGCTTCGAAAGTGGCCTGATTAATCACCATCACTGCCAGTTAGAAGAAACAACGGCTGAAAAGAAACTTCTCAATTTATTCGTTTGATTTAAAATTTTGTGGGTGTTAAGAAAGAGGGGTAAAGATGAATTTGAGTTTTTGTTTTAATTGAACAATTAATCATCACAACGGGAACAGGATTTCAGTCCTCTCGGAGGCAGAGGAGTGAGAAATGAGTGTGTCTGTCTGTCGGTGTCCATATTCATCCGTTCTGTAATTTAGGGTATGTTTCGTCCCATTTATGTAAACGTTCCAGTTTGTTACGATAATTCAATCGATGTTTGCCCTTTCATTTATTATAAATAATGGTTAGCTAAA

mRNA sequence

GTGAACCTAACCACAGTTAAAATGAATTCCTTTATATCTATATATTCCCCTCTTCTTCATCTTCCTCAGATTGGTCTCTGAAACAAACAATAACCATGAGCTGCAACGGTTGCCGCGTTCTCCGTAAGGGCTGCACCGAATCCTGCATCCTCCGGCCTTGCTTGCAGTGGATCGGCACCGCCGAAGCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATCTCCTTCCTCTCCGCCGTTCCACATTCTCAAAGACCTTCTTTGTTTCAGTCTCTGTTATTCGAAGCCTGCGGCCGAACCGTCAACCCGGTCAACGGCGCCGTCGGTCTTCTCTGGACCGGCCACTGGCACATCTGCCAGGCCGCCGTCGACACCGTCTTGCGAGGCGGCACGTTGCGGCCTATCAACGAATTCATTGCCTCCGACCAGACTCATTCCGAGGCCGAAGTCGCCTATTCCGACATCTGGAAGCTTCCAGATTCCGTTCCCAGTTCTCGATTCTCCAATTCCCGGTCCAGGATCTCCCCCAAACTCAACGATCTTGATCTACGATTGACGCCGAATCTTCCCGCCAAAACAATCCGGCGAGCCGGTTCTCCCTCCATGAATTCCGACGAATCCGATTCCAGCTTCGAAAGTGGCCTGATTAATCACCATCACTGCCAGTTAGAAGAAACAACGGCTGAAAAGAAACTTCTCAATTTATTCGTTTGATTTAAAATTTTGTGGGTGTTAAGAAAGAGGGGTAAAGATGAATTTGAGTTTTTGTTTTAATTGAACAATTAATCATCACAACGGGAACAGGATTTCAGTCCTCTCGGAGGCAGAGGAGTGAGAAATGAGTGTGTCTGTCTGTCGGTGTCCATATTCATCCGTTCTGTAATTTAGGGTATGTTTCGTCCCATTTATGTAAACGTTCCAGTTTGTTACGATAATTCAATCGATGTTTGCCCTTTCATTTATTATAAATAATGGTTAGCTAAA

Coding sequence (CDS)

ATGAGCTGCAACGGTTGCCGCGTTCTCCGTAAGGGCTGCACCGAATCCTGCATCCTCCGGCCTTGCTTGCAGTGGATCGGCACCGCCGAAGCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATCTCCTTCCTCTCCGCCGTTCCACATTCTCAAAGACCTTCTTTGTTTCAGTCTCTGTTATTCGAAGCCTGCGGCCGAACCGTCAACCCGGTCAACGGCGCCGTCGGTCTTCTCTGGACCGGCCACTGGCACATCTGCCAGGCCGCCGTCGACACCGTCTTGCGAGGCGGCACGTTGCGGCCTATCAACGAATTCATTGCCTCCGACCAGACTCATTCCGAGGCCGAAGTCGCCTATTCCGACATCTGGAAGCTTCCAGATTCCGTTCCCAGTTCTCGATTCTCCAATTCCCGGTCCAGGATCTCCCCCAAACTCAACGATCTTGATCTACGATTGACGCCGAATCTTCCCGCCAAAACAATCCGGCGAGCCGGTTCTCCCTCCATGAATTCCGACGAATCCGATTCCAGCTTCGAAAGTGGCCTGATTAATCACCATCACTGCCAGTTAGAAGAAACAACGGCTGAAAAGAAACTTCTCAATTTATTCGTTTGA

Protein sequence

MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPKLNDLDLRLTPNLPAKTIRRAGSPSMNSDESDSSFESGLINHHHCQLEETTAEKKLLNLFV

Homology

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BLAST of Sed0004474 vs. NCBI nr
Match: XP_022132879.1 (LOB domain-containing protein 38-like [Momordica charantia])

HSP 1 Score: 338.2 bits (866), Expect = 5.2e-89
Identity = 172/233 (73.82%), Postives = 196/233 (84.12%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPQSQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIA----- 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WH+CQAAV+TVLRGGTLRP+NEF+A     
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMNEFLAGGGSP 120

Query: 121 SDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK-------------LNDLDLRLTP 180
           SD+T SEAEVA +D+WKL DS P+SRFSNSRSR+SPK             LNDLDLRLTP
Sbjct: 121 SDETSSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSDQESTTKQQLNDLDLRLTP 180

Query: 181 NLPAKTIRRAGSPSMNSDESDSS--FESGLINHHHCQLEETT-AEKKLLNLFV 213
             PAK+ RRAG+PSMNS+ES+++  FESGL +HHH Q  +    ++KLLNLFV
Sbjct: 181 IFPAKSTRRAGTPSMNSEESETTTCFESGLGDHHHHQYPQPEGGQRKLLNLFV 233

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BLAST of Sed0004474 vs. NCBI nr
Match: XP_023517275.1 (LOB domain-containing protein 37-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.3 bits (861), Expect = 2.0e-88
Identity = 176/235 (74.89%), Postives = 197/235 (83.83%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFI------ 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WHICQAAV+TVLRGGTLRP+NEF+      
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 -ASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK-----------LNDLDLRLTP 180
            ASD+T SEAEVA +D+WKL DS P+SRFSNSRSR+SPK           LNDLDLRLTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 NLPAKTIRRAGSPSMNSDESDSS--FES-GLINHHHCQL--EETTAEKKLLNLFV 213
           N PAK+ RRA +PSMNS+ES+++  FES GLI+HHH     EE   E+KLLNLFV
Sbjct: 181 NFPAKSTRRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV 234

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BLAST of Sed0004474 vs. NCBI nr
Match: XP_022963426.1 (LOB domain-containing protein 37-like [Cucurbita moschata])

HSP 1 Score: 335.9 bits (860), Expect = 2.6e-88
Identity = 175/235 (74.47%), Postives = 197/235 (83.83%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFI------ 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WHICQAAV+TVLRGGTLRP+NEF+      
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 -ASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK-----------LNDLDLRLTP 180
            ASD+T SEAEVA +D+WKL DS P+SRFSNSRSR+SPK           LNDLDLRLTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 NLPAKTIRRAGSPSMNSDESDSS--FES-GLINHHHCQL--EETTAEKKLLNLFV 213
           N PAK+ RRA +PSMNS+ES+++  FES GL++HHH     EE   E+KLLNLFV
Sbjct: 181 NFPAKSTRRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV 234

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BLAST of Sed0004474 vs. NCBI nr
Match: XP_023003010.1 (LOB domain-containing protein 37-like [Cucurbita maxima])

HSP 1 Score: 335.5 bits (859), Expect = 3.3e-88
Identity = 173/235 (73.62%), Postives = 196/235 (83.40%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFI------ 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WHICQAAV+TVLRGGTLRP+NEF+      
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 -ASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK-----------LNDLDLRLTP 180
            ASD+T SEAEVA +D+WKL DS P+SRFSNSRSR+SPK           LNDLDLRLTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 NLPAKTIRRAGSPSMNSDESDSS--FESGLI---NHHHCQLEETTAEKKLLNLFV 213
           N PAK+ RRA +PSMNS+ES+++  FESG +   +HHH   EE   E+K+LNLFV
Sbjct: 181 NFPAKSTRRAATPSMNSEESETTTCFESGGLVDHHHHHYHPEELVPERKILNLFV 234

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BLAST of Sed0004474 vs. NCBI nr
Match: XP_008440364.1 (PREDICTED: LOB domain-containing protein 37-like [Cucumis melo] >TYK12824.1 LOB domain-containing protein 37-like [Cucumis melo var. makuwa])

HSP 1 Score: 334.0 bits (855), Expect = 9.7e-88
Identity = 171/233 (73.39%), Postives = 194/233 (83.26%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEF------- 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WH+CQAAVDTVLRGGTLRPIN+F       
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPN 120

Query: 121 IASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK------------LNDLDLRLT 180
           +ASD T SE EVA +D+WK+ DS P+SRFSNSRSR+SPK            LNDLDLRLT
Sbjct: 121 LASDDT-SETEVACTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSTKHQLNDLDLRLT 180

Query: 181 PNLPAKTIRRAGSPSMNSDESDSS--FESGLINHHHCQLEETTAEKKLLNLFV 213
           P  PAK+  RA +PSMNS+ES+++  FESGL ++HH   EE TA++KLLNLFV
Sbjct: 181 PTFPAKSTLRAATPSMNSEESETTTCFESGLGDNHHHYPEEGTAQRKLLNLFV 232

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BLAST of Sed0004474 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59
Identity = 132/250 (52.80%), Postives = 163/250 (65.20%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+CILRPC+QWI TA+AQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIA----- 120
           P+LFQSLL+EACGRTVNPVNGA+G+LWTG+W+ICQAAV+TVLRGG+LRPI E +      
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 ---SDQTHSEAEVAYSDIWKLPDSVPS-------SRFSNSRSRIS--------------- 180
                 T  EA    +++  L  +  +       SRFS+SRSR +               
Sbjct: 121 AGFPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLSSE 180

Query: 181 -PKLNDLDLRLTPNLPAK------TIRRAGSPSMNSDESDSSFESGLINHHHCQLEETTA 213
               ++LDL L PN P K      T RR+ +PSMNS++S ++  +               
Sbjct: 181 DQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTTTTTAFCDKGDVYGNGGG 240

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BLAST of Sed0004474 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.9e-58
Identity = 130/244 (53.28%), Postives = 161/244 (65.98%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+CILRPCLQWI +AE+QGHATVFVAKFFGRAGL+SF+S+VP  QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIASDQTH 120
           P+LFQSLLFEACGRTVNPVNGAVG+LWT +WH+CQAAV+TVLRGGTLRPI++ + S    
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 SEAEVAYSDIWKLP---DSVPSSRFSNSRSRISPK-----------LNDLDLR------- 180
              + + S+IW      +     RFS SRS    K            +DLDL+       
Sbjct: 121 ISCDES-SEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTL 180

Query: 181 ---------LTPNLPAKTIR--RAGSPSMNSDESDSSFESGLINHHHCQLEETTAEKKLL 213
                    L P+   K ++  R GSPS  S  + S +E+G+   +  + +    EKKLL
Sbjct: 181 TAPAVPVPFLPPSSFCKVVKGDRPGSPSEES-VTTSCWENGMRGDN--KQKRNKGEKKLL 240

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BLAST of Sed0004474 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.2e-57
Identity = 131/246 (53.25%), Postives = 161/246 (65.45%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+CILRPC+QWI + EAQGHATVFVAKFFGRAGL+SF+SAVP SQ 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIAS---- 120
           P+LFQSLL+EACGRTVNPVNGAVGLLWTG+W++CQAAV+TVLRGG+L+PI E +      
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 ---DQTHSEAEVAYSDIWKLPDSVPSS--------RFSNSRSR----ISP---------- 180
                T  EA    +++  L  +  S         RFS+SRSR     SP          
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSSEQ 180

Query: 181 -KLNDLDLRLTPNLPAKTIR-RAGSPSMNSDESDS--SFESGLINHHH--CQLEETTAEK 212
              ++LDL L P  P KT+  +  +PSM S+ES +  SF++      +  C      A  
Sbjct: 181 QPSSELDLSLIPIYPIKTLPFKEDTPSMYSEESVTTVSFQNNNAGDRYVRCGGGGGGATT 240

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BLAST of Sed0004474 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 72/110 (65.45%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+C +RPCLQWI +AE+Q +ATVF+AKF+GRAGL++ L+  P   R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPI 111
           P++F+SLL+EACGR VNP+ G+VGLLW+G+WH+CQAAV+ V+RG  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Sed0004474 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.6e-39
Identity = 85/193 (44.04%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E C +RPCL WI + EAQ +ATVF+AKF+GRAGL++ ++A P+  R
Sbjct: 3   MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIASDQTH 120
           P +F+SLL EACGR VNP+ G+VGLLW+G+W +CQ AV+ V++G    P+ E IA+D   
Sbjct: 63  PGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKG---EPVKE-IATD--- 122

Query: 121 SEAEVAYSDIWKLPDSVPSSRFSNSRSRISPKLNDLDLRLTPNLPAKTIRRAGSPSMNSD 180
             A +      K+ D    S+  NS +  +      DL+L     AK +      + +  
Sbjct: 123 -AATIGQGPPLKIYDIRHISKDDNSAAAAT---GSTDLKLAKTRRAKRVSTVAIQAESEG 182

Query: 181 ESDSSFESGLINH 194
           +SD +     ++H
Sbjct: 183 KSDEASHDSSLSH 184

[Close]

BLAST of Sed0004474 vs. ExPASy TrEMBL
Match: A0A6J1BUC0 (LOB domain-containing protein 38-like OS=Momordica charantia OX=3673 GN=LOC111005616 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.5e-89
Identity = 172/233 (73.82%), Postives = 196/233 (84.12%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPQSQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIA----- 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WH+CQAAV+TVLRGGTLRP+NEF+A     
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMNEFLAGGGSP 120

Query: 121 SDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK-------------LNDLDLRLTP 180
           SD+T SEAEVA +D+WKL DS P+SRFSNSRSR+SPK             LNDLDLRLTP
Sbjct: 121 SDETSSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSDQESTTKQQLNDLDLRLTP 180

Query: 181 NLPAKTIRRAGSPSMNSDESDSS--FESGLINHHHCQLEETT-AEKKLLNLFV 213
             PAK+ RRAG+PSMNS+ES+++  FESGL +HHH Q  +    ++KLLNLFV
Sbjct: 181 IFPAKSTRRAGTPSMNSEESETTTCFESGLGDHHHHQYPQPEGGQRKLLNLFV 233

[Close]

BLAST of Sed0004474 vs. ExPASy TrEMBL
Match: A0A6J1HG39 (LOB domain-containing protein 37-like OS=Cucurbita moschata OX=3662 GN=LOC111463636 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 175/235 (74.47%), Postives = 197/235 (83.83%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFI------ 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WHICQAAV+TVLRGGTLRP+NEF+      
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 -ASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK-----------LNDLDLRLTP 180
            ASD+T SEAEVA +D+WKL DS P+SRFSNSRSR+SPK           LNDLDLRLTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 NLPAKTIRRAGSPSMNSDESDSS--FES-GLINHHHCQL--EETTAEKKLLNLFV 213
           N PAK+ RRA +PSMNS+ES+++  FES GL++HHH     EE   E+KLLNLFV
Sbjct: 181 NFPAKSTRRAATPSMNSEESETTTCFESGGLVDHHHRNYHPEELVPERKLLNLFV 234

[Close]

BLAST of Sed0004474 vs. ExPASy TrEMBL
Match: A0A6J1KQK8 (LOB domain-containing protein 37-like OS=Cucurbita maxima OX=3661 GN=LOC111496753 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88
Identity = 173/235 (73.62%), Postives = 196/235 (83.40%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFI------ 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WHICQAAV+TVLRGGTLRP+NEF+      
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPMNEFLAAGSPN 120

Query: 121 -ASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK-----------LNDLDLRLTP 180
            ASD+T SEAEVA +D+WKL DS P+SRFSNSRSR+SPK           LNDLDLRLTP
Sbjct: 121 PASDET-SEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNQLNDLDLRLTP 180

Query: 181 NLPAKTIRRAGSPSMNSDESDSS--FESGLI---NHHHCQLEETTAEKKLLNLFV 213
           N PAK+ RRA +PSMNS+ES+++  FESG +   +HHH   EE   E+K+LNLFV
Sbjct: 181 NFPAKSTRRAATPSMNSEESETTTCFESGGLVDHHHHHYHPEELVPERKILNLFV 234

[Close]

BLAST of Sed0004474 vs. ExPASy TrEMBL
Match: A0A5D3CP44 (LOB domain-containing protein 37-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004160 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.7e-88
Identity = 171/233 (73.39%), Postives = 194/233 (83.26%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEF------- 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WH+CQAAVDTVLRGGTLRPIN+F       
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPN 120

Query: 121 IASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK------------LNDLDLRLT 180
           +ASD T SE EVA +D+WK+ DS P+SRFSNSRSR+SPK            LNDLDLRLT
Sbjct: 121 LASDDT-SETEVACTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSTKHQLNDLDLRLT 180

Query: 181 PNLPAKTIRRAGSPSMNSDESDSS--FESGLINHHHCQLEETTAEKKLLNLFV 213
           P  PAK+  RA +PSMNS+ES+++  FESGL ++HH   EE TA++KLLNLFV
Sbjct: 181 PTFPAKSTLRAATPSMNSEESETTTCFESGLGDNHHHYPEEGTAQRKLLNLFV 232

[Close]

BLAST of Sed0004474 vs. ExPASy TrEMBL
Match: A0A1S3B1K4 (LOB domain-containing protein 37-like OS=Cucumis melo OX=3656 GN=LOC103484839 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.7e-88
Identity = 171/233 (73.39%), Postives = 194/233 (83.26%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+ESCILRPCLQWI T+EAQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEF------- 120
           PSLFQSLLFEACGRTVNPVNGAVGLLWTG+WH+CQAAVDTVLRGGTLRPIN+F       
Sbjct: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPN 120

Query: 121 IASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPK------------LNDLDLRLT 180
           +ASD T SE EVA +D+WK+ DS P+SRFSNSRSR+SPK            LNDLDLRLT
Sbjct: 121 LASDDT-SETEVACTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSTKHQLNDLDLRLT 180

Query: 181 PNLPAKTIRRAGSPSMNSDESDSS--FESGLINHHHCQLEETTAEKKLLNLFV 213
           P  PAK+  RA +PSMNS+ES+++  FESGL ++HH   EE TA++KLLNLFV
Sbjct: 181 PTFPAKSTLRAATPSMNSEESETTTCFESGLGDNHHHYPEEGTAQRKLLNLFV 232

[Close]

BLAST of Sed0004474 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 231.1 bits (588), Expect = 8.3e-61
Identity = 132/250 (52.80%), Postives = 163/250 (65.20%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+CILRPC+QWI TA+AQGHATVFVAKFFGRAGL+SF+SAVP SQR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIA----- 120
           P+LFQSLL+EACGRTVNPVNGA+G+LWTG+W+ICQAAV+TVLRGG+LRPI E +      
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 ---SDQTHSEAEVAYSDIWKLPDSVPS-------SRFSNSRSRIS--------------- 180
                 T  EA    +++  L  +  +       SRFS+SRSR +               
Sbjct: 121 AGFPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLSSE 180

Query: 181 -PKLNDLDLRLTPNLPAK------TIRRAGSPSMNSDESDSSFESGLINHHHCQLEETTA 213
               ++LDL L PN P K      T RR+ +PSMNS++S ++  +               
Sbjct: 181 DQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTTTTTAFCDKGDVYGNGGG 240

[Close]

BLAST of Sed0004474 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 226.5 bits (576), Expect = 2.0e-59
Identity = 130/244 (53.28%), Postives = 161/244 (65.98%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+CILRPCLQWI +AE+QGHATVFVAKFFGRAGL+SF+S+VP  QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIASDQTH 120
           P+LFQSLLFEACGRTVNPVNGAVG+LWT +WH+CQAAV+TVLRGGTLRPI++ + S    
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 SEAEVAYSDIWKLP---DSVPSSRFSNSRSRISPK-----------LNDLDLR------- 180
              + + S+IW      +     RFS SRS    K            +DLDL+       
Sbjct: 121 ISCDES-SEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTL 180

Query: 181 ---------LTPNLPAKTIR--RAGSPSMNSDESDSSFESGLINHHHCQLEETTAEKKLL 213
                    L P+   K ++  R GSPS  S  + S +E+G+   +  + +    EKKLL
Sbjct: 181 TAPAVPVPFLPPSSFCKVVKGDRPGSPSEES-VTTSCWENGMRGDN--KQKRNKGEKKLL 240

[Close]

BLAST of Sed0004474 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-58
Identity = 131/246 (53.25%), Postives = 161/246 (65.45%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+CILRPC+QWI + EAQGHATVFVAKFFGRAGL+SF+SAVP SQ 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIAS---- 120
           P+LFQSLL+EACGRTVNPVNGAVGLLWTG+W++CQAAV+TVLRGG+L+PI E +      
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 ---DQTHSEAEVAYSDIWKLPDSVPSS--------RFSNSRSR----ISP---------- 180
                T  EA    +++  L  +  S         RFS+SRSR     SP          
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSSEQ 180

Query: 181 -KLNDLDLRLTPNLPAKTIR-RAGSPSMNSDESDS--SFESGLINHHH--CQLEETTAEK 212
              ++LDL L P  P KT+  +  +PSM S+ES +  SF++      +  C      A  
Sbjct: 181 QPSSELDLSLIPIYPIKTLPFKEDTPSMYSEESVTTVSFQNNNAGDRYVRCGGGGGGATT 240

[Close]

BLAST of Sed0004474 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-43
Identity = 72/110 (65.45%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E+C +RPCLQWI +AE+Q +ATVF+AKF+GRAGL++ L+  P   R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPI 111
           P++F+SLL+EACGR VNP+ G+VGLLW+G+WH+CQAAV+ V+RG  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Sed0004474 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 162.2 bits (409), Expect = 4.7e-40
Identity = 85/193 (44.04%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQR 60
           MSCNGCRVLRKGC+E C +RPCL WI + EAQ +ATVF+AKF+GRAGL++ ++A P+  R
Sbjct: 3   MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLR 62

Query: 61  PSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIASDQTH 120
           P +F+SLL EACGR VNP+ G+VGLLW+G+W +CQ AV+ V++G    P+ E IA+D   
Sbjct: 63  PGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKG---EPVKE-IATD--- 122

Query: 121 SEAEVAYSDIWKLPDSVPSSRFSNSRSRISPKLNDLDLRLTPNLPAKTIRRAGSPSMNSD 180
             A +      K+ D    S+  NS +  +      DL+L     AK +      + +  
Sbjct: 123 -AATIGQGPPLKIYDIRHISKDDNSAAAAT---GSTDLKLAKTRRAKRVSTVAIQAESEG 182

Query: 181 ESDSSFESGLINH 194
           +SD +     ++H
Sbjct: 183 KSDEASHDSSLSH 184

The following BLAST results are available for this feature:

BLAST of Sed0004474 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132879.1	5.2e-89	73.82	LOB domain-containing protein 38-like [Momordica charantia]	[more]
XP_023517275.1	2.0e-88	74.89	LOB domain-containing protein 37-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963426.1	2.6e-88	74.47	LOB domain-containing protein 37-like [Cucurbita moschata]	[more]
XP_023003010.1	3.3e-88	73.62	LOB domain-containing protein 37-like [Cucurbita maxima]	[more]
XP_008440364.1	9.7e-88	73.39	PREDICTED: LOB domain-containing protein 37-like [Cucumis melo] >TYK12824.1 LOB ...	[more]

BLAST of Sed0004474 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN11	1.2e-59	52.80	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9SZE8	2.9e-58	53.28	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]
Q9SN23	9.2e-57	53.25	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9ZW96	1.1e-41	65.45	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9M886	6.6e-39	44.04	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]

BLAST of Sed0004474 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUC0	2.5e-89	73.82	LOB domain-containing protein 38-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1HG39	1.2e-88	74.47	LOB domain-containing protein 37-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1KQK8	1.6e-88	73.62	LOB domain-containing protein 37-like OS=Cucurbita maxima OX=3661 GN=LOC11149675...	[more]
A0A5D3CP44	4.7e-88	73.39	LOB domain-containing protein 37-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B1K4	4.7e-88	73.39	LOB domain-containing protein 37-like OS=Cucumis melo OX=3656 GN=LOC103484839 PE...	[more]

BLAST of Sed0004474 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67420.1	8.3e-61	52.80	LOB domain-containing protein 37	[more]
AT4G37540.1	2.0e-59	53.28	LOB domain-containing protein 39	[more]
AT3G49940.1	6.6e-58	53.25	LOB domain-containing protein 38	[more]
AT1G67100.1	7.8e-43	65.45	LOB domain-containing protein 40	[more]
AT3G02550.1	4.7e-40	44.04	LOB domain-containing protein 41	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 2..100 e-value: 4.6E-25 score: 88.1
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 1..107 score: 19.240168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186
None	No IPR available	PANTHER	PTHR31304:SF36	LOB DOMAIN-CONTAINING PROTEIN	coord: 1..212
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004474.1	Sed0004474.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression