Sed0004467 (gene) Chayote v1

Overview


Name	Sed0004467
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Cytoplasmic 60S subunit biogenesis factor REI1-like protein 1
Location	LG13: 25576375 .. 25580337 (-)
RNA-Seq Expression	Sed0004467
Synteny	Sed0004467

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGAGCATGCGTCTGTTTGAGCCGTCAACAACGATTTCTTCTTTCTCCGCAAAACCTTTCTTCAAATCGCCACTGCATATCTTCGGTTCATCGTTTCGTTTCTCAGAATCCATTGAACTCAGAATCAGCGTTTGAGAAGAAAGATGAGGGGACTAACCTGCAATTCCTGCAACAAAGAATTCTTCGACGCCGATGAGCAAAAGCTTCACTACAGATCCGAATGGCATCGCTACAATCTTAAGCGCAAGGTTCTGTTTCTATCTCTCTCTCTCTGTAACGCTTGTGTTATTGTGCTCGTAAACGTGATTAATCGGTTTGGTTTGCTAATTTTATGTTTCTTTCTGTTTGGGTATTGGTTTTGGATTTCTGGGCAACAATGGTTGCCTGATTGTTTTGATTCCTTCGTCAGAATTCGTTTTTTTTATGTGAAAAAACTTGCGGTGATTATGTGATATACCTACCATTATGCTTTTTTGATTTTATGAAGTTCAGCTGAAATGATTGCTCTGAAGTATTAATCGTGTTTTTGAGATGGTTAGTTTTCGAATTCTACTGTCCCAAAGGGTGGCACAGTGGTTGAAGACTTGGACTTTGAGGTTATGCTCTCATCAAGTCCTAGGTTCGAAATTCACTTGTGATATTACTCTTTCGATGTCTATGGTGTCTAGCCTAGGGACGGACGTGGTTACCTTGTTTCAACAAAAAAAAAAAAAAGTTTTCTAATTCTACTGCACTTAGCTGCTGTTTTCTGCTTGTTAAAATTTTGGATGTTTTTAGAGTTCCTCTGTTAAAATTTTATGAAGTTCCTTTGTTTGTTTTTTTTAAAAAACAAGGGTAACCATGCCCGTCCCTAGGCTAGGCACCGAGAGATATCGAAGGAATAATGTCACAGTTGAGTCTCGAACTGGAGATCTTGAGGGGAGCCTACCTTCAAAATCTAAGTCTTCAACCACTGTGTCATCCCTTGGGGACTGAATCTTTGTTTGTTATATTAATGAATGGTTGATAGCCCTATGTAAACAGTCTCTTCGAATTATATTTTGGATTGAGGCGAGTTGCTTCCATTGAACCTTTGAAATATTAGAGTTTCTAACAAACAAAGTCTTACTTTGTCAACTTCTAGCTGTACATACGAGGAATCTTTCTTTTGGTACTTTTAAACTCGTTGATTCAATTTAATGGCGAAGTAAATTGTCACTCACGCGACATAGCATGAAGAGTGACGTTAGTACATATAGTGGTAATAATGGTGTGCATAGTCTGGAAGCATGATATGCTCTGCCCTGCATATTTACTGCATATGCCATGTTCAATAGAAAAAGAATAAGGTTTTCATTCTAGGGTGTAACTTTTTACTTTCCTTTGTTATTAACCATTGCGTGAACGTCGAAGTATGGAGCATCCAAATGTTAATCCTTTTTCTTTTTCTTCCTTCAATTTTGTTGTAATTGTAAGTACTAGAGGACTTTTTTGTTTCTGATTTTTATTGTGCAGAGATAGTCTACTGTGTATTTTTCGATGATTTTGCTTATATTAATGCATGGGGATAATAGTTACGGGACTCTAATTAGCATAAGCATTTCGAAGAATAATAATTTTGTCTGGATATAGTATTTGAGAGTTTTTGGGAGTGTCTATGGGAAAGATGCATTATATTTCTTTCAAAACCCACGTTTGTTACGTCATTTATCTAATTATCTTGTGAATAATCAGGTAGCTAATGTTCCTGGGGTTACAGAGGCGTTGTTCTTAGCTAGACAATCTGCTGCTGTTGCACAAGAGAATGCCAATTCAAGAGAGACCTCAATGTTATACTCTTGCGGTCTTTGTAGCAAAGCTTATAGAAGTTCCCAGGCTCATGCTCAACATCTCAAATCTAGGAGCCACATCATCCTAACTTCGCAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCTCTTTCTCAGCGAATTAGCAATACGGTTCCGCAACAAAACGAGGAGGAAGAGAGCGAGGAGGAGTGGGAGGAAGTTGACCCTGACGAAGACATGATTGATGCGAATTATTCTGATGATTCTGATGCTATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATTTAGAGCATGATACCATTGATAGCTGCATAATCCACATGCTTAAGCAACATGGATTTTTTATTCCTGATGTTGAATATTTGAAGGATCCGAAGGGCTTCCTAACATACCTCGGCTTGAAGGTGCCAAAATGAGATACCCTTTATTCGATTTCCTTTTTTCTCAATAAAATCAGAATTTGATTTACTTCCCTTTCACATTTGTCCAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATTGTCTTCCATTTAGCAGCTTGGAAGCAGTCAGGAAGCATATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGTGATGGAGATGAGAATGAAGAAGTAGAACTAGAAGAATTTTATGATTACAGTAGCAGGTTCTTATATCCTTCTATTACTTGAATTCACAGTTCTTATTAGCTTCAAGTTAACTTGCTTCTCATTTTCTATGGTGTTGTCATATAGTTATGTGGATGGAAGTGGCAACCAGCTAGTGGCATCAGGGGATGGAGCCCATTCTGTTCAACTTGGTAGTGGTGGGGCTGAGCTGATCTTAGTTCAAAGAACTACCGAGCGGCAATCGACCAAAACACTTGGTTCCAGGCAATTTCTACGATATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTAGCAGCAAGGTATATTACGATCCTTTTAATCAAGTTCTTCAGCTTTGAATGTAATATAAACCAACTTCAATGGACGAGATTATACAAAGAAAATCAATGAGAATAAGATCTAGGACAATTCTTGTACAGGACAATTAGCTCAATTAACCTAAAGTTCATACCTAGCCAGTAGCTAAGGTTTAAATCCCTTCACATACTGTTAAACTATTTGTTTTCCTTCTTTTTTTGTTATTATTGGGGAGTATTCGAGTCAACCTACACACCTCGAATATTTTCAGGTTAAACTGTTTGACTCTATAACATTTGATTGTTAAGAAAATTCGTAGAAAATTCATTCTTCGATTGGTTGCCATTTAGATCACTAGGCTAATCTACGATGGACAATTATAAAAATCTATAAAACCTCAGATGTCAGCTAAACCAAGCTAAAAATGGAACCTCTTCTCAAAGCTTCTTGACACCTTTTAAAATGCTCTACACAACAAGGAAAAAGGCTACATGCCAAAGAGTTTTTTCCTAACCATCTTGGAGTGGCTTATAAATTGTCAAGAGGGTTTTGGGGAATTTAAAGATTATGGTTTAATTCATGGTGGTCACCTACCTAAAAATTAATTTCTTACGGATTTTCTTGGCATCTAAATATTTTAGGGATAGATGTTATATTTCGTGACAATAATAATCAAGTTGATGGGTGAACCAAATATTGATGAGGGATTGGCATTTTGAGTTGCAGGTACAGGAGCATGGGATTGGCAACTGTCCAGTCAAGAGAGAGGATGATCAGGATGAAGGTGATGAAAGAAATGAATCGAACCGGATTGGAAGCTATGCGCACCAAAGTCGGGTTGAAGAACAACGTAATCCGAAACCTCCCTAAGAATGTTCCACATTAGTGCTATTTTGCTTGCCCTACATTACATCTTCATCAAAATTGAAGTGCTTAAGATCGAAGAACAATCGGCTTTGATAGGCCGCAATGTAAGAGTTGTAATTTGCGTTTGCTTTTTTTATTTGCCTGTATTCTCTTGACATTACACAGTTTTTATGGTGCTGCTCAGAAAGTAATTTTTAGTCTTTTTTTTTTAAATAAACCCACGACTCAATTAGTTTGATTAGTTTCAAATTATATCCGTCGTTAATTCAAAATTTTGTATCATTTTGGCAGAATGGGT

mRNA sequence

GTTAGAGCATGCGTCTGTTTGAGCCGTCAACAACGATTTCTTCTTTCTCCGCAAAACCTTTCTTCAAATCGCCACTGCATATCTTCGGTTCATCGTTTCGTTTCTCAGAATCCATTGAACTCAGAATCAGCGTTTGAGAAGAAAGATGAGGGGACTAACCTGCAATTCCTGCAACAAAGAATTCTTCGACGCCGATGAGCAAAAGCTTCACTACAGATCCGAATGGCATCGCTACAATCTTAAGCGCAAGGTAGCTAATGTTCCTGGGGTTACAGAGGCGTTGTTCTTAGCTAGACAATCTGCTGCTGTTGCACAAGAGAATGCCAATTCAAGAGAGACCTCAATGTTATACTCTTGCGGTCTTTGTAGCAAAGCTTATAGAAGTTCCCAGGCTCATGCTCAACATCTCAAATCTAGGAGCCACATCATCCTAACTTCGCAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCTCTTTCTCAGCGAATTAGCAATACGGTTCCGCAACAAAACGAGGAGGAAGAGAGCGAGGAGGAGTGGGAGGAAGTTGACCCTGACGAAGACATGATTGATGCGAATTATTCTGATGATTCTGATGCTATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATTTAGAGCATGATACCATTGATAGCTGCATAATCCACATGCTTAAGCAACATGGATTTTTTATTCCTGATGTTGAATATTTGAAGGATCCGAAGGGCTTCCTAACATACCTCGGCTTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATTGTCTTCCATTTAGCAGCTTGGAAGCAGTCAGGAAGCATATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGTGATGGAGATGAGAATGAAGAAGTAGAACTAGAAGAATTTTATGATTACAGTAGCAGTTATGTGGATGGAAGTGGCAACCAGCTAGTGGCATCAGGGGATGGAGCCCATTCTGTTCAACTTGGTAGTGGTGGGGCTGAGCTGATCTTAGTTCAAAGAACTACCGAGCGGCAATCGACCAAAACACTTGGTTCCAGGCAATTTCTACGATATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTAGCAGCAAGGTACAGGAGCATGGGATTGGCAACTGTCCAGTCAAGAGAGAGGATGATCAGGATGAAGGTGATGAAAGAAATGAATCGAACCGGATTGGAAGCTATGCGCACCAAAGTCGGGTTGAAGAACAACGTAATCCGAAACCTCCCTAAGAATGTTCCACATTAGTGCTATTTTGCTTGCCCTACATTACATCTTCATCAAAATTGAAGTGCTTAAGATCGAAGAACAATCGGCTTTGATAGGCCGCAATGTAAGAGTTGTAATTTGCGTTTGCTTTTTTTATTTGCCTGTATTCTCTTGACATTACACAGTTTTTATGGTGCTGCTCAGAAAGTAATTTTTAGTCTTTTTTTTTTAAATAAACCCACGACTCAATTAGTTTGATTAGTTTCAAATTATATCCGTCGTTAATTCAAAATTTTGTATCATTTTGGCAGAATGGGT

Coding sequence (CDS)

ATGAGGGGACTAACCTGCAATTCCTGCAACAAAGAATTCTTCGACGCCGATGAGCAAAAGCTTCACTACAGATCCGAATGGCATCGCTACAATCTTAAGCGCAAGGTAGCTAATGTTCCTGGGGTTACAGAGGCGTTGTTCTTAGCTAGACAATCTGCTGCTGTTGCACAAGAGAATGCCAATTCAAGAGAGACCTCAATGTTATACTCTTGCGGTCTTTGTAGCAAAGCTTATAGAAGTTCCCAGGCTCATGCTCAACATCTCAAATCTAGGAGCCACATCATCCTAACTTCGCAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCTCTTTCTCAGCGAATTAGCAATACGGTTCCGCAACAAAACGAGGAGGAAGAGAGCGAGGAGGAGTGGGAGGAAGTTGACCCTGACGAAGACATGATTGATGCGAATTATTCTGATGATTCTGATGCTATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATTTAGAGCATGATACCATTGATAGCTGCATAATCCACATGCTTAAGCAACATGGATTTTTTATTCCTGATGTTGAATATTTGAAGGATCCGAAGGGCTTCCTAACATACCTCGGCTTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATTGTCTTCCATTTAGCAGCTTGGAAGCAGTCAGGAAGCATATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGTGATGGAGATGAGAATGAAGAAGTAGAACTAGAAGAATTTTATGATTACAGTAGCAGTTATGTGGATGGAAGTGGCAACCAGCTAGTGGCATCAGGGGATGGAGCCCATTCTGTTCAACTTGGTAGTGGTGGGGCTGAGCTGATCTTAGTTCAAAGAACTACCGAGCGGCAATCGACCAAAACACTTGGTTCCAGGCAATTTCTACGATATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTAGCAGCAAGGTACAGGAGCATGGGATTGGCAACTGTCCAGTCAAGAGAGAGGATGATCAGGATGAAGGTGATGAAAGAAATGAATCGAACCGGATTGGAAGCTATGCGCACCAAAGTCGGGTTGAAGAACAACGTAATCCGAAACCTCCCTAAGAATGTTCCACATTAG

Protein sequence

MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENANSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISNTVPQQNEEEESEEEWEEVDPDEDMIDANYSDDSDAIEVDLDPSCCFMCDLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH

Homology

[Close]

BLAST of Sed0004467 vs. NCBI nr
Match: XP_004136315.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 [Cucumis sativus] >KGN60160.1 hypothetical protein Csa_002141 [Cucumis sativus])

HSP 1 Score: 692.6 bits (1786), Expect = 2.0e-195
Identity = 348/395 (88.10%), Postives = 367/395 (92.91%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D DEQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRE SMLYSCGLCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRENSMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDA----NYSDDSDAIEVDLDPSCCFMCDLEHDTID 180
             PQQ+EEEESE+EWEEVDPDEDM+D     N  DD+DAIEVDLDPSCCFMCDLEHDTI+
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDENEDDDTDAIEVDLDPSCCFMCDLEHDTIE 180

Query: 181 SCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHM 240
           SC++HM K+HGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHM
Sbjct: 181 SCMVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHM 240

Query: 241 EAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELIL 300
           EAKSHCKVHYGD DENEEVELEEFYDYSSSYVDGSGNQLV SG   ++VQ GSGGAELIL
Sbjct: 241 EAKSHCKVHYGDEDENEEVELEEFYDYSSSYVDGSGNQLVPSGAQDNTVQFGSGGAELIL 300

Query: 301 VQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIR 360
           VQ ++ERQSTKTLGSRQFLRYYRQKPRPSPANDAAITA LAARYRSMGLATVQSRE+MIR
Sbjct: 301 VQGSSERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIR 360

Query: 361 MKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           MKVMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 MKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 395

[Close]

BLAST of Sed0004467 vs. NCBI nr
Match: KAA0038762.1 (cytoplasmic 60S subunit biogenesis factor REI1-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 688.3 bits (1775), Expect = 3.7e-194
Identity = 345/393 (87.79%), Postives = 365/393 (92.88%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D DEQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRET+MLYSCGLCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETAMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDANYSDDS--DAIEVDLDPSCCFMCDLEHDTIDSC 180
             PQQ+EEEESE+EWEEVDPDEDM+D N  +D   DAIEVDLDPSCCFMCDLEHDTI+SC
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDEDEDIDAIEVDLDPSCCFMCDLEHDTIESC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM K+HGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA
Sbjct: 181 MVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGD DENEEVELEEFYDYSSSYVDG GNQLV SG   ++V+ GSGGAELILVQ
Sbjct: 241 KSHCKVHYGDEDENEEVELEEFYDYSSSYVDGGGNQLVPSGAQDNTVEFGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
            + ERQSTKTLGSRQFLRYYRQKPRPSPANDAAITA LAARYRSMGLATVQSRE+MIRMK
Sbjct: 301 GSGERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 393

[Close]

BLAST of Sed0004467 vs. NCBI nr
Match: XP_038899653.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 [Benincasa hispida])

HSP 1 Score: 685.6 bits (1768), Expect = 2.4e-193
Identity = 345/393 (87.79%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D +EQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRETSMLYSCGLCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETSMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDAN--YSDDSDAIEVDLDPSCCFMCDLEHDTIDSC 180
            VPQQ+EEEESEEEWEEVDP+E M+D N    DD D IEVDLDPSCCFMCDLEHDTI+SC
Sbjct: 121 KVPQQSEEEESEEEWEEVDPNEVMVDGNEDQDDDIDDIEVDLDPSCCFMCDLEHDTIESC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM KQHGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA
Sbjct: 181 MVHMHKQHGFFIPDIEYLKDPKGFLTYIGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGD DENEEVELEEFYDYSSSYVDGSGNQLV SG   ++V+ GSGGAELILVQ
Sbjct: 241 KSHCKVHYGDEDENEEVELEEFYDYSSSYVDGSGNQLVPSGTRDNTVEFGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
            T+ER+STKTLGSRQFLRYYRQKPRPSPANDAA+TA LAARYRSMGLATVQSRE+MIRMK
Sbjct: 301 GTSERKSTKTLGSRQFLRYYRQKPRPSPANDAAMTAVLAARYRSMGLATVQSREKMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVP+
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPY 393

[Close]

BLAST of Sed0004467 vs. NCBI nr
Match: KAG6591623.1 (Cytoplasmic 60S subunit biogenesis factor REI1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 685.3 bits (1767), Expect = 3.2e-193
Identity = 349/393 (88.80%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF DA+EQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MTGLTCNACNKEFLDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRETSMLYSCGLCSKAYRS+QAHAQHLKSRSHII  SQGTHDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETSMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRVSQGTHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMID--ANYSDDSDAIEVDLDPSCCFMCDLEHDTIDSC 180
             PQQ+EEEESEEEWEEV+PDE+MID   +  DD DAIEVD DPSCCFMCDL+HDTID+C
Sbjct: 121 KEPQQSEEEESEEEWEEVNPDEEMIDEGEDEDDDIDAIEVDFDPSCCFMCDLKHDTIDNC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM KQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDN LPFS LEAVRKHMEA
Sbjct: 181 MVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNRLPFSCLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS NQLV SG G +SV+LGSGGAELILVQ
Sbjct: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS-NQLVPSGAGDNSVELGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
           RT +RQSTKTLGSRQFLRYYRQKPRPSPANDA +TA LAARYRSMGLATVQSRE MIRMK
Sbjct: 301 RTNDRQSTKTLGSRQFLRYYRQKPRPSPANDALLTAVLAARYRSMGLATVQSRETMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 392

[Close]

BLAST of Sed0004467 vs. NCBI nr
Match: XP_008466318.1 (PREDICTED: cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 [Cucumis melo] >TYK31377.1 cytoplasmic 60S subunit biogenesis factor REI1-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 684.9 bits (1766), Expect = 4.1e-193
Identity = 344/393 (87.53%), Postives = 364/393 (92.62%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D DEQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRET+MLYSC LCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETAMLYSCCLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDANYSDDS--DAIEVDLDPSCCFMCDLEHDTIDSC 180
             PQQ+EEEESE+EWEEVDPDEDM+D N  +D   DAIEVDLDPSCCFMCDLEHDTI+SC
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDEDEDIDAIEVDLDPSCCFMCDLEHDTIESC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM K+HGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA
Sbjct: 181 MVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGD DENEEVELEEFYDYSSSYVDG GNQLV SG   ++V+ GSGGAELILVQ
Sbjct: 241 KSHCKVHYGDEDENEEVELEEFYDYSSSYVDGGGNQLVPSGARDNTVEFGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
            + ERQSTKTLGSRQFLRYYRQKPRPSPANDAAITA LAARYRSMGLATVQSRE+MIRMK
Sbjct: 301 GSGERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 393

[Close]

BLAST of Sed0004467 vs. ExPASy Swiss-Prot
Match: Q8H1G5 (Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=REIL1 PE=1 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 3.4e-129
Identity = 239/410 (58.29%), Postives = 313/410 (76.34%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CN EF D +E+ LHY+S+WHRYNLKRKVA VPGVTEALF ARQS A+AQE  
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQS-ALAQEKN 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTH-DQEVEKPIIKPLSQRIS 120
            S E  MLY+C +C+K YRSS+AH QHL+SRSH++  SQGT  + E +  II+ L +R+ 
Sbjct: 61  KSNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQ 120

Query: 121 NTVPQQNEEEESEEEWEEVDPDEDM-----------IDANYS-------DDSDAIEVDLD 180
           +   + + +++SE+EW EVD DE++           ++ N S       DD DA + +LD
Sbjct: 121 H---RGSIDDDSEDEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADKYELD 180

Query: 181 PSCCFMCDLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCND 240
           P+CC MCD +H T++SC++HM K HGFFIPD+EYLKDP+G LTYLGLKV RDF CLYCN+
Sbjct: 181 PTCCLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNE 240

Query: 241 NCLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDG 300
            C PFSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEFYDYSSSYVD +G Q+V SG+ 
Sbjct: 241 LCRPFSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSYVDEAGKQIVVSGET 300

Query: 301 AHSVQLGSGGAELILVQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYR 360
            ++V+L  GG+EL++ +++    ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RY+
Sbjct: 301 DNTVEL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRYK 360

Query: 361 SMGLATVQSRERMIRMKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           S+GL TV S+E  +RMKV KEM++ G E MRTK+G+K+NVIRNLP NVP+
Sbjct: 361 SLGLKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 404

[Close]

BLAST of Sed0004467 vs. ExPASy Swiss-Prot
Match: Q9ZQ18 (Cytoplasmic 60S subunit biogenesis factor REI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=REIL2 PE=1 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 7.5e-129
Identity = 243/403 (60.30%), Postives = 307/403 (76.18%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GL CNSCNK+F D  EQK HY+SEWHRYNLKRK+A VPGVTEALF ARQ AA+AQE  
Sbjct: 1   MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQ-AAIAQEKV 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQR--- 120
            + E  MLYSCG+C+K YRSS+AH QHLKS+SH++  S  T ++  +K IIK L  R   
Sbjct: 61  KAVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEE--DKAIIKQLPPRRVE 120

Query: 121 ISNTVPQQN--EEEESEEEWEEVDPDEDMIDANYSD-------DSDAIEVDLDPSCCFMC 180
            +NT   +   EEEESE+EW EVD DED +DA  ++       D D IE +LDP+CC MC
Sbjct: 121 KNNTAQLKGSIEEEESEDEWIEVDSDED-LDAEMNEDGEEEDMDEDGIEFELDPACCLMC 180

Query: 181 DLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSS 240
           D +H TI+ C++HM K HGFFIPD+EYLKDPKGFLTYLGLKV RDF CLYCN+ C PFSS
Sbjct: 181 DKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYCNELCHPFSS 240

Query: 241 LEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLG 300
           LEAVRKHM+AK HCKVHYGDG + E+ ELEEFYDYSSSYV+G  NQ+V SG+  ++V+L 
Sbjct: 241 LEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQMVVSGESVNTVEL- 300

Query: 301 SGGAELILVQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATV 360
            GG+EL++ +RT  + +++TLGSR+F+RYY+QKP PS  +   I  +L +RY+ MGLATV
Sbjct: 301 FGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPS--SQKHIVNSLTSRYKMMGLATV 360

Query: 361 QSRERMIRMKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           QS+E ++RMKVM+EMN+ G ++   ++G+K+NVIRNLP NV +
Sbjct: 361 QSKEAIVRMKVMREMNKRGAKS-SVRLGMKSNVIRNLPNNVTY 395

[Close]

BLAST of Sed0004467 vs. ExPASy Swiss-Prot
Match: Q969S3 (Zinc finger protein 622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-36
Identity = 141/485 (29.07%), Postives = 208/485 (42.89%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSA--AVAQE 60
           M   TC +C   F DAD Q+ HY+++WHRYNL+RKVA++  VT   F  R  A  AVA+E
Sbjct: 1   MATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEE 60

Query: 61  NANSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILT--------------------- 120
            +    T     C +CSK + S  A+  HLKSR H+ L                      
Sbjct: 61  ESKGSAT----YCTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEK 120

Query: 121 ------------------------------------------------SQGTHDQEVEK- 180
                                                            +GTHD++  + 
Sbjct: 121 GLGVDSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEK 180

Query: 181 -PIIKPLSQRISNTVPQQNEEEESEEE------WEEVDPDEDM-------IDANYSDDSD 240
            P ++   Q+      QQ E+ E EEE      WE++D DE++       +D     D++
Sbjct: 181 PPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAE 240

Query: 241 AIEVDLDP-------SCCFMCDLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLG 300
             E +  P       + C  C     ++   + HM K H FFIPD+EYL D KG + YLG
Sbjct: 241 EEEAEEGPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLG 300

Query: 301 LKVMRDFRCLYCNDNCLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSY 360
            KV     CL+CN+    F S EAV+ HM  KSHCK+ + DGD    +E  +FYD+ SSY
Sbjct: 301 EKVGVGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSY 360

Query: 361 VD---GSGNQLVASGDGAHSVQLGSGGAELILVQRTTERQSTKTLGSRQFLRYYRQK--- 386
            D   G             +++      ELIL        S   +G R  +RYY+Q+   
Sbjct: 361 PDHKEGEDPNKAEELPSEKNLEYDDETMELIL-------PSGARVGHRSLMRYYKQRFGL 420

[Close]

BLAST of Sed0004467 vs. ExPASy Swiss-Prot
Match: Q90Y35 (Zinc finger protein 622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.8e-34
Identity = 113/359 (31.48%), Postives = 163/359 (45.40%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSA--AVAQE 60
           M   TC +C   F DAD Q+ HY+++WHRYNLKRKVA++P VT   F  R  A  AVA+E
Sbjct: 1   MATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEE 60

Query: 61  NANSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGT----------HDQEVE- 120
               R+      C +CSK + +  A+  HLKS+ H+ L  +            +++ +E 
Sbjct: 61  ----RDKVTATYCTVCSKRFSTFNAYENHLKSKKHLELEKKAVQAVSKKVKILNEKNLEK 120

Query: 121 ----------------------------KPIIKPLSQRISNTVPQQN------------- 180
                                       K +  P S   S+ VP ++             
Sbjct: 121 GLAVESVDKDEMNAAIQQAIRAQPSSSPKKVPLPPSHASSSPVPMESAGLLQSKERTQKP 180

Query: 181 -------------------EEEESEEEWEEVDPDEDM---IDANYSDDSDAIEVDLDPSC 240
                              EEE+SEE WEE+D DED+    +    ++ +  + + + +C
Sbjct: 181 PRLQWFEQQAKKLAKQEAEEEEDSEEGWEEMDSDEDLGSEEEMEGVEEEEEKQAEAESTC 240

Query: 241 ---------CFMCDLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFR 275
                    C  C     T+   + HM K H FFIPD+EYL D +G + YLG K+     
Sbjct: 241 AIGAIPVTDCLFCSHHSRTLMKNVAHMTKVHSFFIPDIEYLVDLRGLIKYLGEKIGVGKI 300

[Close]

BLAST of Sed0004467 vs. ExPASy Swiss-Prot
Match: Q7TM96 (Zinc finger protein 622 OS=Rattus norvegicus OX=10116 GN=Znf622 PE=1 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-33
Identity = 113/355 (31.83%), Postives = 158/355 (44.51%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSA--AVAQE 60
           M   TC +C   F DA+ Q+ HY+++WHRYNL+RKVAN+  VT   F  R  A  AVA+E
Sbjct: 1   MATYTCITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAEGFQERVRAQRAVAEE 60

Query: 61  NANSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGT----------HDQEVEK 120
            +    T     C +CSK + +  A+  HLKSR H+ L  +            +++ +EK
Sbjct: 61  ESKGTAT----YCTVCSKKFATFNAYENHLKSRRHVELEKKAVQAVSRQVEMMNEKNLEK 120

Query: 121 ------------------------------------------------------PIIKP- 180
                                                                 P  KP 
Sbjct: 121 GLGVDSVNKDAMNAAIQQAIKAQPSTSPKKAPFMPTDESRRVAGAVRRGTPERDPTEKPP 180

Query: 181 ----LSQRISNTVPQQNEE-----EESEEEWEEVDPDEDMIDAN---YSDDSDAIEVDLD 240
                 Q+      QQ EE     EE +E+WE++D D+ +   N     +D++  E +  
Sbjct: 181 RLQWFEQQAKKLAKQQWEESEEEGEEDDEDWEDIDSDDGLECENPGVEEEDAEDAEAEES 240

Query: 241 P-------SCCFMCDLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDF 270
           P       + C  C     ++   + HM K H FFIPD+EYL D KG + YLG KV    
Sbjct: 241 PPLGAIPITDCLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGK 300

[Close]

BLAST of Sed0004467 vs. ExPASy TrEMBL
Match: A0A0A0LDT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881730 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 9.6e-196
Identity = 348/395 (88.10%), Postives = 367/395 (92.91%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D DEQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRE SMLYSCGLCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRENSMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDA----NYSDDSDAIEVDLDPSCCFMCDLEHDTID 180
             PQQ+EEEESE+EWEEVDPDEDM+D     N  DD+DAIEVDLDPSCCFMCDLEHDTI+
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDENEDDDTDAIEVDLDPSCCFMCDLEHDTIE 180

Query: 181 SCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHM 240
           SC++HM K+HGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHM
Sbjct: 181 SCMVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHM 240

Query: 241 EAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELIL 300
           EAKSHCKVHYGD DENEEVELEEFYDYSSSYVDGSGNQLV SG   ++VQ GSGGAELIL
Sbjct: 241 EAKSHCKVHYGDEDENEEVELEEFYDYSSSYVDGSGNQLVPSGAQDNTVQFGSGGAELIL 300

Query: 301 VQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIR 360
           VQ ++ERQSTKTLGSRQFLRYYRQKPRPSPANDAAITA LAARYRSMGLATVQSRE+MIR
Sbjct: 301 VQGSSERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIR 360

Query: 361 MKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           MKVMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 MKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 395

[Close]

BLAST of Sed0004467 vs. ExPASy TrEMBL
Match: A0A5A7T5K5 (Cytoplasmic 60S subunit biogenesis factor REI1-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003150 PE=4 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.8e-194
Identity = 345/393 (87.79%), Postives = 365/393 (92.88%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D DEQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRET+MLYSCGLCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETAMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDANYSDDS--DAIEVDLDPSCCFMCDLEHDTIDSC 180
             PQQ+EEEESE+EWEEVDPDEDM+D N  +D   DAIEVDLDPSCCFMCDLEHDTI+SC
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDEDEDIDAIEVDLDPSCCFMCDLEHDTIESC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM K+HGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA
Sbjct: 181 MVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGD DENEEVELEEFYDYSSSYVDG GNQLV SG   ++V+ GSGGAELILVQ
Sbjct: 241 KSHCKVHYGDEDENEEVELEEFYDYSSSYVDGGGNQLVPSGAQDNTVEFGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
            + ERQSTKTLGSRQFLRYYRQKPRPSPANDAAITA LAARYRSMGLATVQSRE+MIRMK
Sbjct: 301 GSGERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 393

[Close]

BLAST of Sed0004467 vs. ExPASy TrEMBL
Match: A0A5D3E5I1 (Cytoplasmic 60S subunit biogenesis factor REI1-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006840 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.0e-193
Identity = 344/393 (87.53%), Postives = 364/393 (92.62%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D DEQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRET+MLYSC LCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETAMLYSCCLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDANYSDDS--DAIEVDLDPSCCFMCDLEHDTIDSC 180
             PQQ+EEEESE+EWEEVDPDEDM+D N  +D   DAIEVDLDPSCCFMCDLEHDTI+SC
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDEDEDIDAIEVDLDPSCCFMCDLEHDTIESC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM K+HGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA
Sbjct: 181 MVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGD DENEEVELEEFYDYSSSYVDG GNQLV SG   ++V+ GSGGAELILVQ
Sbjct: 241 KSHCKVHYGDEDENEEVELEEFYDYSSSYVDGGGNQLVPSGARDNTVEFGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
            + ERQSTKTLGSRQFLRYYRQKPRPSPANDAAITA LAARYRSMGLATVQSRE+MIRMK
Sbjct: 301 GSGERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 393

[Close]

BLAST of Sed0004467 vs. ExPASy TrEMBL
Match: A0A1S3CQY2 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Cucumis melo OX=3656 GN=LOC103503764 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.0e-193
Identity = 344/393 (87.53%), Postives = 364/393 (92.62%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF D DEQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRET+MLYSC LCSKAYRS+QAHAQHLKSRSHII  SQG HDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETAMLYSCCLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMIDANYSDDS--DAIEVDLDPSCCFMCDLEHDTIDSC 180
             PQQ+EEEESE+EWEEVDPDEDM+D N  +D   DAIEVDLDPSCCFMCDLEHDTI+SC
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDEDEDIDAIEVDLDPSCCFMCDLEHDTIESC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM K+HGFFIPD+EYLKDPKGFLTY+GLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA
Sbjct: 181 MVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGD DENEEVELEEFYDYSSSYVDG GNQLV SG   ++V+ GSGGAELILVQ
Sbjct: 241 KSHCKVHYGDEDENEEVELEEFYDYSSSYVDGGGNQLVPSGARDNTVEFGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
            + ERQSTKTLGSRQFLRYYRQKPRPSPANDAAITA LAARYRSMGLATVQSRE+MIRMK
Sbjct: 301 GSGERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 393

[Close]

BLAST of Sed0004467 vs. ExPASy TrEMBL
Match: A0A6J1FAP6 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443606 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 7.6e-193
Identity = 347/393 (88.30%), Postives = 365/393 (92.88%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CNKEF DA+EQKLHY+SEWHRYNLKRKVANVPGVTEALFLARQSAA AQENA
Sbjct: 1   MTGLTCNACNKEFLDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQRISN 120
            SRETSMLYSCGLCSKAYRS+QAHAQHLKSRSH I  SQGTHDQEVEKPIIKPL QRISN
Sbjct: 61  KSRETSMLYSCGLCSKAYRSAQAHAQHLKSRSHTIRVSQGTHDQEVEKPIIKPLPQRISN 120

Query: 121 TVPQQNEEEESEEEWEEVDPDEDMID--ANYSDDSDAIEVDLDPSCCFMCDLEHDTIDSC 180
             PQQ+EEEESEEEWEEV+PDE+MID   +  DD DAIEVD DPSCCFMCDL+HDT+D+C
Sbjct: 121 KEPQQSEEEESEEEWEEVNPDEEMIDEGEDEDDDIDAIEVDFDPSCCFMCDLKHDTVDNC 180

Query: 181 IIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240
           ++HM KQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDN LPFS LEAVRKHMEA
Sbjct: 181 MVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNRLPFSCLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLGSGGAELILVQ 300
           KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS NQLV SG G +SV+LGSGGAELILVQ
Sbjct: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS-NQLVQSGAGDNSVELGSGGAELILVQ 300

Query: 301 RTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATVQSRERMIRMK 360
           RT +RQSTKTLGSRQFLRYYRQKPRPSPANDA +TA LAARYRSMGLATVQSRE MIRMK
Sbjct: 301 RTNDRQSTKTLGSRQFLRYYRQKPRPSPANDALLTAVLAARYRSMGLATVQSRETMIRMK 360

Query: 361 VMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           VMKEMNRTGLEAMRTK+GLKNNVIRNLPKNVPH
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 392

[Close]

BLAST of Sed0004467 vs. TAIR 10
Match: AT4G31420.1 (Zinc finger protein 622 )

HSP 1 Score: 463.0 bits (1190), Expect = 2.4e-130
Identity = 239/410 (58.29%), Postives = 313/410 (76.34%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CN EF D +E+ LHY+S+WHRYNLKRKVA VPGVTEALF ARQS A+AQE  
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQS-ALAQEKN 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTH-DQEVEKPIIKPLSQRIS 120
            S E  MLY+C +C+K YRSS+AH QHL+SRSH++  SQGT  + E +  II+ L +R+ 
Sbjct: 61  KSNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQ 120

Query: 121 NTVPQQNEEEESEEEWEEVDPDEDM-----------IDANYS-------DDSDAIEVDLD 180
           +   + + +++SE+EW EVD DE++           ++ N S       DD DA + +LD
Sbjct: 121 H---RGSIDDDSEDEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADKYELD 180

Query: 181 PSCCFMCDLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCND 240
           P+CC MCD +H T++SC++HM K HGFFIPD+EYLKDP+G LTYLGLKV RDF CLYCN+
Sbjct: 181 PTCCLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNE 240

Query: 241 NCLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDG 300
            C PFSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEFYDYSSSYVD +G Q+V SG+ 
Sbjct: 241 LCRPFSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSYVDEAGKQIVVSGET 300

Query: 301 AHSVQLGSGGAELILVQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYR 360
            ++V+L  GG+EL++ +++    ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RY+
Sbjct: 301 DNTVEL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRYK 360

Query: 361 SMGLATVQSRERMIRMKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           S+GL TV S+E  +RMKV KEM++ G E MRTK+G+K+NVIRNLP NVP+
Sbjct: 361 SLGLKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 404

[Close]

BLAST of Sed0004467 vs. TAIR 10
Match: AT2G24500.1 (Zinc finger protein 622 )

HSP 1 Score: 461.8 bits (1187), Expect = 5.3e-130
Identity = 243/403 (60.30%), Postives = 307/403 (76.18%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GL CNSCNK+F D  EQK HY+SEWHRYNLKRK+A VPGVTEALF ARQ AA+AQE  
Sbjct: 1   MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQ-AAIAQEKV 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTHDQEVEKPIIKPLSQR--- 120
            + E  MLYSCG+C+K YRSS+AH QHLKS+SH++  S  T ++  +K IIK L  R   
Sbjct: 61  KAVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEE--DKAIIKQLPPRRVE 120

Query: 121 ISNTVPQQN--EEEESEEEWEEVDPDEDMIDANYSD-------DSDAIEVDLDPSCCFMC 180
            +NT   +   EEEESE+EW EVD DED +DA  ++       D D IE +LDP+CC MC
Sbjct: 121 KNNTAQLKGSIEEEESEDEWIEVDSDED-LDAEMNEDGEEEDMDEDGIEFELDPACCLMC 180

Query: 181 DLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSS 240
           D +H TI+ C++HM K HGFFIPD+EYLKDPKGFLTYLGLKV RDF CLYCN+ C PFSS
Sbjct: 181 DKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYCNELCHPFSS 240

Query: 241 LEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAHSVQLG 300
           LEAVRKHM+AK HCKVHYGDG + E+ ELEEFYDYSSSYV+G  NQ+V SG+  ++V+L 
Sbjct: 241 LEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQMVVSGESVNTVEL- 300

Query: 301 SGGAELILVQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYRSMGLATV 360
            GG+EL++ +RT  + +++TLGSR+F+RYY+QKP PS  +   I  +L +RY+ MGLATV
Sbjct: 301 FGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPS--SQKHIVNSLTSRYKMMGLATV 360

Query: 361 QSRERMIRMKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           QS+E ++RMKVM+EMN+ G ++   ++G+K+NVIRNLP NV +
Sbjct: 361 QSKEAIVRMKVMREMNKRGAKS-SVRLGMKSNVIRNLPNNVTY 395

[Close]

BLAST of Sed0004467 vs. TAIR 10
Match: AT4G31420.2 (Zinc finger protein 622 )

HSP 1 Score: 458.4 bits (1178), Expect = 5.9e-129
Identity = 239/411 (58.15%), Postives = 313/411 (76.16%), Query Frame = 0


Query: 1   MRGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVTEALFLARQSAAVAQENA 60
           M GLTCN+CN EF D +E+ LHY+S+WHRYNLKRKVA VPGVTEALF ARQS A+AQE  
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQS-ALAQEKN 60

Query: 61  NSRETSMLYSCGLCSKAYRSSQAHAQHLKSRSHIILTSQGTH-DQEVEKPIIKPLSQRIS 120
            S E  MLY+C +C+K YRSS+AH QHL+SRSH++  SQGT  + E +  II+ L +R+ 
Sbjct: 61  KSNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQ 120

Query: 121 NTVPQQNEEEESEEEWEEVDPDEDM-----------IDANYS-------DDSDAIEVDLD 180
           +   + + +++SE+EW EVD DE++           ++ N S       DD DA + +LD
Sbjct: 121 H---RGSIDDDSEDEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADKYELD 180

Query: 181 PSCCFMCDLEHDTIDSCIIHMLKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCND 240
           P+CC MCD +H T++SC++HM K HGFFIPD+EYLKDP+G LTYLGLKV RDF CLYCN+
Sbjct: 181 PTCCLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNE 240

Query: 241 NCLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDY-SSSYVDGSGNQLVASGD 300
            C PFSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEFYDY SSSYVD +G Q+V SG+
Sbjct: 241 LCRPFSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSSYVDEAGKQIVVSGE 300

Query: 301 GAHSVQLGSGGAELILVQRTTERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARY 360
             ++V+L  GG+EL++ +++    ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RY
Sbjct: 301 TDNTVEL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRY 360

Query: 361 RSMGLATVQSRERMIRMKVMKEMNRTGLEAMRTKVGLKNNVIRNLPKNVPH 392
           +S+GL TV S+E  +RMKV KEM++ G E MRTK+G+K+NVIRNLP NVP+
Sbjct: 361 KSLGLKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 405

[Close]

BLAST of Sed0004467 vs. TAIR 10
Match: AT1G43860.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 43.5 bits (101), Expect = 4.5e-04
Identity = 15/42 (35.71%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 2   RGLTCNSCNKEFFDADEQKLHYRSEWHRYNLKRKVANVPGVT 44
           +G  C++CN    +A + + H +S+WH++NLKRK   +P ++
Sbjct: 307 KGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPIS 348

The following BLAST results are available for this feature:

BLAST of Sed0004467 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136315.1	2.0e-195	88.10	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 [Cucumis sativus] >KGN6...	[more]
KAA0038762.1	3.7e-194	87.79	cytoplasmic 60S subunit biogenesis factor REI1-like protein 1 [Cucumis melo var....	[more]
XP_038899653.1	2.4e-193	87.79	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 [Benincasa hispida]	[more]
KAG6591623.1	3.2e-193	88.80	Cytoplasmic 60S subunit biogenesis factor REI1-like 1, partial [Cucurbita argyro...	[more]
XP_008466318.1	4.1e-193	87.53	PREDICTED: cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 [Cucumis mel...	[more]

BLAST of Sed0004467 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1G5	3.4e-129	58.29	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Arabidopsis thaliana...	[more]
Q9ZQ18	7.5e-129	60.30	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 2 OS=Arabidopsis thaliana...	[more]
Q969S3	1.1e-36	29.07	Zinc finger protein 622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1	[more]
Q90Y35	1.8e-34	31.48	Zinc finger protein 622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1	[more]
Q7TM96	2.0e-33	31.83	Zinc finger protein 622 OS=Rattus norvegicus OX=10116 GN=Znf622 PE=1 SV=2	[more]

BLAST of Sed0004467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDT9	9.6e-196	88.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881730 PE=4 SV=1	[more]
A0A5A7T5K5	1.8e-194	87.79	Cytoplasmic 60S subunit biogenesis factor REI1-like protein 1 OS=Cucumis melo va...	[more]
A0A5D3E5I1	2.0e-193	87.53	Cytoplasmic 60S subunit biogenesis factor REI1-like protein 1 OS=Cucumis melo va...	[more]
A0A1S3CQY2	2.0e-193	87.53	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Cucumis melo OX=3656...	[more]
A0A6J1FAP6	7.6e-193	88.30	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita mosch...	[more]

BLAST of Sed0004467 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31420.1	2.4e-130	58.29	Zinc finger protein 622	[more]
AT2G24500.1	5.3e-130	60.30	Zinc finger protein 622	[more]
AT4G31420.2	5.9e-129	58.15	Zinc finger protein 622	[more]
AT1G43860.1	4.5e-04	35.71	sequence-specific DNA binding transcription factors	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 214..241 e-value: 10.0 score: 13.1 coord: 4..28 e-value: 28.0 score: 9.3 coord: 163..186 e-value: 100.0 score: 4.4 coord: 69..93 e-value: 1.7 score: 17.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 71..93
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 6..28
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 69..93 score: 8.621145
IPR041661	ZN622/Rei1/Reh1, zinc finger C2H2-type	PFAM	PF12756	zf-C2H2_2	coord: 165..266 e-value: 4.6E-25 score: 87.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	PANTHER	PTHR13182:SF24	ZINC FINGER PROTEIN-RELATED	coord: 1..390
IPR040025	Zinc finger protein 622/Rei1/Reh1	PANTHER	PTHR13182	ZINC FINGER PROTEIN 622	coord: 1..390
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 150..201
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 3..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004467.1	Sed0004467.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding