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Sed0004459 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCGATCAGTGGCGCCGCCGGTAGCCGGTGGTGATCTTGCGGCATGGCTGAGAACAGAGACATTACTCAAAGAAACCCTAAACTTGCGAGGTCGTTAAGAGGAAGTGTCCAGAAATCAGGGGAGAATAAAGATGAGAAAGCAGCTAACGTTGTCACTGTTCCGTTACCGGAAGTCGTTGCTCTGCCGCCGTTGGCGGTTGAGGAAAAGCGCTGTGGGAAGTTTTCGCATCCGGTTATCCGGTGGTCGGTATGATTCGTTCTCCATTTTTTTAATTTATTGCCTTCAAAAAAACTTTTTTTATGTTAAAAAAAAAAAAAACTATTTTCATTCCTAAATTTTTTATAAAAATTCAACCGCGGGACTTTGAACCCTAAAATTATGGTGTGTTTGGGGCAGTTTATGCAAATAATCGGGTTTGTTATAATAATTCAACCAATGTTTGACCTACCATTTTTAGATAGATGGTCATTGAGGATTGAATTTATCATCTTATACACCTTAATACCCTCTTTCACCAATTGAATCGCTCCATAATTGTTATTCAGACTCACTATTCAAGAGATTATATATATCTCTATATATCCTTAAATTGTTAAATGAAAAAAAGAAGTTTGAGCTTTATTTTAAAATTTCTGTTTATTTAGTTAAAAACTTAAATTTACAGATTTTTTTTTATTCGATATCATTAAATTCCCGTACTCTTTTTTGTAGGACTTCTACATGTATATTACAAAATGGTTAAAATATTATATGAGTAGCACAATAATGAAAATATTTGTACACATGACAAAAAATGTAAATTGATAGACTTCTATATTGATAGATTCTATCAAAGAGGCTAATGGAATCATTACTAATAAATAAAGAAAATTGATAGACTTCCATTAGATTCTATCAATAAGGACTCATAGAATAAATTACTAATAAAATTGATAGACTTCCATCACCAAAAAATGATAGATTCTATCAAAGTGTTCGATAAAAAAGGTATATAGAGATTTTTTTAAAAAAATGAGAATTTGGAATTATTTTAAACAGTTGCTATAATTATAAATAGGCAAAAAGTTGTTATACAAGTTCCAATTCCATTTTTTATCTTAAATTTCCGTACTCTTTAGTTAATCGAAATTGATTTAAAAATTCAAATAGAAGAAATGATCAGGCTAATATATTTTTTTAATTTATGGAATAAAAGGTGATAGACAATTTAAATGAAAAAAATTAACAATAAACCTATCAATAAATTGCAAGTTATACTTTTAAGTACATCTTTTATAGAAAGTAAAATTGAGACTAAATTCATTTTCAAAAAATAAATAAATAAAATTGAGACTAAAGTCAGACAAATTTTTAAGTACATCTTTCAAAATAAAATTCTGAGACTAATAATTGTCCATAATCTCGTGCTAAATAGTAGTTTAAGAAAATTTTATAATCTTTTAAACGGTTCCAAATGTATCATGTGACACGTACCCTAAAAGAAACTTTCATTTTTGTTTAATTTTAGTTATCGTACTTTTAATATAATTTAAAATTAAATCTATATAAAAACTTCATATTCATTGTTATTTAAATTGGCTTGATTATAATTTTAAGACTATTTCTAAAATTATTAGCTAAACTTGTAAATCGAACTTTCATAATCTTAGCTCTATTTGACCATTTTCATCCTATCTTATAATTCTATTTCAGTTGAATTTCGCTATGATTCCTTGGCCTATACATATTTCATTTGCCGTAGTTTTTTTTATTATTATTATTTTTAAACCTATTTTCCTTAGTTTTTATGAAAAAAATGGGAAGAAAAAAAAATTAATTAATTTCTTGTGGCTGATTTCATCTGCTTTTTCAGTTATATGCTTTAGGAGGATACCTTATCGTAAGGTGGGCTTGGAATAAATGGAAGCCTGAGAGTGAGGACGACGAAGACAAAAAATAAGTTTTATTTACCAAAACCAATTTGTTAAATGCAATATGGTTGCCAATTTATTTTACTATGATTCTTGTGTTTGTAAATTATAAGTTTCGAAATTGCTTACAATTTTACTTGAATTTGTTTTCTTTTCAATAAAATGTAAAATTTAAATCAATCTATTTATTTAAATTTCTATTGGTTATCAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCGATCAGTGGCGCCGCCGGTAGCCGGTGGTGATCTTGCGGCATGGCTGAGAACAGAGACATTACTCAAAGAAACCCTAAACTTGCGAGGTCGTTAAGAGGAAGTGTCCAGAAATCAGGGGAGAATAAAGATGAGAAAGCAGCTAACGTTGTCACTGTTCCGTTACCGGAAGTCGTTGCTCTGCCGCCGTTGGCGGTTGAGGAAAAGCGCTGTGGGAAGTTTTCGCATCCGGTTATCCGGTGGTCGTTATATGCTTTAGGAGGATACCTTATCGTAAGGTGGGCTTGGAATAAATGGAAGCCTGAGAGTGAGGACGACGAAGACAAAAAATAAGTTTTATTTACCAAAACCAATTTGTTAAATGCAATATGGTTGCCAATTTATTTTACTATGATTCTTGTGTTTGTAAATTATAAGTTTCGAAATTGCTTACAATTTTACTTGAATTTGTTTTCTTTTCAATAAAATGTAAAATTTAAATCAATCTATTTATTTAAATTTCTATTGGTTATCAAA ATGGCTGAGAACAGAGACATTACTCAAAGAAACCCTAAACTTGCGAGGTCGTTAAGAGGAAGTGTCCAGAAATCAGGGGAGAATAAAGATGAGAAAGCAGCTAACGTTGTCACTGTTCCGTTACCGGAAGTCGTTGCTCTGCCGCCGTTGGCGGTTGAGGAAAAGCGCTGTGGGAAGTTTTCGCATCCGGTTATCCGGTGGTCGTTATATGCTTTAGGAGGATACCTTATCGTAAGGTGGGCTTGGAATAAATGGAAGCCTGAGAGTGAGGACGACGAAGACAAAAAATAA MAENRDITQRNPKLARSLRGSVQKSGENKDEKAANVVTVPLPEVVALPPLAVEEKRCGKFSHPVIRWSLYALGGYLIVRWAWNKWKPESEDDEDKK Homology
BLAST of Sed0004459 vs. NCBI nr
Match: XP_022985696.1 (uncharacterized protein LOC111483672 [Cucurbita maxima]) HSP 1 Score: 97.1 bits (240), Expect = 9.1e-17 Identity = 54/101 (53.47%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Sed0004459 vs. NCBI nr
Match: XP_011655848.1 (uncharacterized protein LOC101213355 [Cucumis sativus] >KGN52215.1 hypothetical protein Csa_008804 [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16 Identity = 52/104 (50.00%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Sed0004459 vs. NCBI nr
Match: XP_022957161.1 (uncharacterized protein LOC111458630 [Cucurbita moschata]) HSP 1 Score: 90.9 bits (224), Expect = 6.5e-15 Identity = 52/103 (50.49%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of Sed0004459 vs. NCBI nr
Match: XP_023553666.1 (uncharacterized protein LOC111811149 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 90.9 bits (224), Expect = 6.5e-15 Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of Sed0004459 vs. NCBI nr
Match: KAG6601203.1 (hypothetical protein SDJN03_06436, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14 Identity = 52/103 (50.49%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of Sed0004459 vs. ExPASy TrEMBL
Match: A0A6J1J8Z1 (uncharacterized protein LOC111483672 OS=Cucurbita maxima OX=3661 GN=LOC111483672 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.4e-17 Identity = 54/101 (53.47%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Sed0004459 vs. ExPASy TrEMBL
Match: A0A0A0KRF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G616350 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.5e-17 Identity = 52/104 (50.00%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Sed0004459 vs. ExPASy TrEMBL
Match: A0A6J1GYG5 (uncharacterized protein LOC111458630 OS=Cucurbita moschata OX=3662 GN=LOC111458630 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.1e-15 Identity = 52/103 (50.49%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of Sed0004459 vs. ExPASy TrEMBL
Match: A0A6J1CDG9 (uncharacterized protein LOC111010218 OS=Momordica charantia OX=3673 GN=LOC111010218 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13 Identity = 43/90 (47.78%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of Sed0004459 vs. ExPASy TrEMBL
Match: A0A1S3BGK5 (uncharacterized protein LOC103489415 OS=Cucumis melo OX=3656 GN=LOC103489415 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.7e-13 Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of Sed0004459 vs. TAIR 10
Match: AT3G52230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07 Identity = 29/90 (32.22%), Postives = 47/90 (52.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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