Sed0004453 (gene) Chayote v1

Overview


Name	Sed0004453
Type	gene
Organism	Sechium edule (Chayote v1)
Description	U4/U6 small nuclear ribonucleoprotein Prp31 homolog
Location	LG04: 4915660 .. 4919573 (-)
RNA-Seq Expression	Sed0004453
Synteny	Sed0004453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGTTATCTCGGCTGTCGATCGGCGAAGAGCGGTGACGGCAAGTTCCGATCAATTGTTCTCTCTTCCTCTGTTTCTTCGGCGGTTTTCTTCATCTTCTCAGTGTGAAATTTCATCTGCTGTGCGTCAATTCCCTTCTCGTAACATTTGAAGAACGTACCTTGATTCGAGGTTAGGGTTTTCCTTTTGTGTTACAGTTTCTGATTGCGGTTATATCTCTATATATATATATATATCTATGTGTGTGTATTTAAGTTTATATATGTTTCACTAACTCTAAAAATTGGATTCTTGATTTTCAGCGGCTTTTCCAATTGGGGCTGAATTGTGTTCTACCGGAAGCGCTTTGTAATCTTCTAATATGGTCAGTGCCTTTTTATTTTTCTTTTATCTTCTGCTTGCAATCATGGAATGTTTAGGGTTTCGGCACTTCCTTTTGTATGCTGGATTAGATTAGTTGCTACTTTTTGCATTTAACTGCAATCGAGTTATGATTGTGGTATTCAGTAATGTGCTATTTAAATTTGTAGCTTAGTTCTTTATCAGCTGCTGATTCTGTGTTGGTATTTATGTTCTTTCTTGAACTGGGAAGTTGCTCAAAGCATATCTGTAGTGCTCTCTACATGGACCCTGAATTCAAGTTTTGTTTTTTCTTTCAATTTTTCTGTATTTGATTATAATTTATGGTTGGTGAAAGGGGACTTAATTGGTTTCTTTCTTGCCTGGAATTCCTTGGACCAACGAACAAGTTGGGATGGATTACTTTCGTTTAATCTTTTATTGTTATCTTATTAGTAAGCTTTTCAATTTTGATATGATGCTTATTTCAATTGTATTTGGAGTTCGTCTTGAAAAACGTGAATTATCTTGTTTTGTAGGCTACTTTGGCCGATTCTTTTCTAGCCGATCTTGATGAACTCTCTGATGAAGACAAATTTCTGGTGAGTGATGCTTTTCCCTTCCGTACGTGAAAGTTAAGTCATTATCATGTTAGCAGTTGCACAAATCAATCTACCTTCTATTTTGAGGTAATAGTTATTGGATGTTTGCAGGAAGAAGAAGATGTTGATGGTGAAAATATGGAAGAGGATATTGATGGGGACCTTGCGGACCTAGAAAGCCTTAATTATGATGATCTGGATAGTGTTTCAAAATTGCAGAAAACACAGAGATACAATGATATAATGCAGGTTGGTCACATGAAAATTTCCCTTTGACGTTTGCATATCCTTGGGCTTTAATGGAAAGGGTTTGGGCGAGAGCCAATAATAAATTAGTATTTTGTCTTTCTATTATGAAGTTTTCATGCATTTTCTATTAACTATGATATTATTGAAACCAAAACTTCTCTCCTTGAAATGTTAAATAGTTTTATTGTTCTGACTGTTTGTTTATAATTTTAATGAGATTTGTTGGCATATGATTTACAGAAAGTGGAAGATGCATTGGAGAAGGATTCTAGTTTCTCAAATCAAGGATTAGTATTGGAAGATGATCCTGAGTACCAATTGATTGTGGAGTGTAATGCTTTGTCTGTGGATATTGAAAACGAAATTATTATTATTCACAACTTTATACGTGATAAATATCGATTGAAGTTTCCAGAGCTTGAATCACTTGTGCACCACCCAATCGATTATGCTCGTGTTGTTAAGAAGATTGGGAATGAAATAGATTTGACTCTTGTAGATTTAGAAGGGCTTCTACCCTCTGCTGTCATTATGGTTGTCTCAGTTACCGCATCTACCACAAGTGGAAAGCCACTTCCAGAGGAAATCCTTCAGAAAACCATTGATGCGTGTGATCGGGCTCTTGCTTTAGATTCAGCTAAAAAAATGGTCCTTAATTTTGTTGAAAGCAGAATGGGATATATTGCACCAAATCTTTCTGCCATAGTTGGAAGTGCAGTTGCAGCAAAACTAATGGGAACTGCTGGCGGGCTTGGTGCTTTAGCTAAGATGCCTGCTTGCAATGTTCAACTTCTTGGTGCAAAGAAAAAAAACCTTGCTGGGTTTTCCACTGCAACTTCACAATTTCGGGTAGGTTATATTGAGCAAACAGAGATATTCCAATCAACACCTCCTCCTTTGAAGATGCGAGCTTGTCGACTGGTAGCTGCAAAATCAACACTTGCCTCACGAGTTGACTCCACCAGAGGGGATCCTACCGGAAAGACTGGACGAGTCTTCAAAGATGAGATCCTTAAAAAAATTGAGAAGTGGCAGGAACCTCCACCAGCAAAACAACCAAAACCTCTACCGGTCCCTGATTCTGAACCCAAAAAGAAGAGAGGTGGCCGTCGACTAAGGAAAATGAAGGAAAGGTACTGATATTTTTTCCATCTATCTAGCAATTTAGGCTTTACTCTTTTCTACTTTTTGGAGGCTTTACTTTGTTTCAATTTTCGGTTGTGCATGGATTGATATGACTTTCCTTGTCAGATATGCAACAACAGAGATGAGGAAACTAGCAAACAGGATGCAGTTTGGGATTCCTGAAGAAAGTTCTTTAGGTAAAGCTTTCCTTAATTTTTTTTAATAATCCAGATTATCATCAGTATGAGATGAAATGATATGCTGTTCAGTAATCTTGATCGCCATGTTGTGTATGAACCCAAAAAATTGTCATAATTGCAAGTAATTCTACCAGTCCATAACAATGCCTGTGTTTCACTCTCTTTCAGGAATATTGCATGTCAGATGTATTTTCATCTGCATATAGAAATTTATTCTGGATGGAATAAGTAGTTGTTTGAAGCATTTTGCAATAATATTCTAAATAAAGGTTTAACTCTTTTCATCATTTCATACTACAACAGGAGATGGATTAGGGGAAGGGTACGGAATGCTTGGTCAAGCTGGGAGTGGCAAGCTGCGTGTGTCAGCTGTTCAGAGCAAGCTTGGTGCGAAAGTCGTTAAGAAGTAAGTTAAGTCATTCATTGAGCTGATCTTAATAACACCACCCCCCTCAAAAATAGAAAATACAAAATAATAGTAGCTGTAGAGGAGAAACAGTAGTTGCTTGCAGCCTTTTCATTCATGTATGAAAAAATAGGAGAGTTCTATCGAAATTAGTTACATTAAACTTGCCAAAGTGTAAGTAAAGTACTTGCAGCAGTCCCGAAGGGGGGCACAAGTTGTTAAAGACTTGGGAGCTTTCAAGGTGTGCTTCCCTCAAAGTCTCAAATTTGAAACTCACATGTGATATTAATTTGTAGATGTCTCTCGTGTCTCCATTTCTTCAATGTCTAGGGATAGGTGTGGCTACCCCAGGTATAGTGGAGGAAAACTCCGATTTCTTTGTTTAAAAAAATTATAATAAAGTACTTGCAGCAAGCCATCAGCCCGTTTATCGATCTGTTTTGATTGACCTATTTTCTTAAATTACTTTTAGATTCAAGGAAAAACGATATGGAAGCAGTGGTGCTACATCTGGGCTGACGTCGAGTTTAGCATTTACACCTGTACAGGTCCGTATTTCTCGCCTTCCTCGCCATTTCCTCCTACGTTATTCCATGTTCGCCTTCAAAACAGTTGTTTTTTCCTTGCAGGGTATTGAGCTGTCGAATCCTCAAGCTCATTTGAACCAGCTAGGAGGTGGAACTCAAAGCACCTACTTTTCTGAAACAGGAACATTTTCAAAGATCAGAAAAAACTAAAGTCATTAGAAAATCAAGCATCATCCTGTTTCATGGTCGTGCTATGTAAGCTTATTATATAGATATGCCTTATGATGACGCTTTGTAATTCAGTACTAAGAGAGAGCCACATACAATTTTTTGTTTTCAAAACTATAACCCGAAGGTTATTCTTTGTGCCTTGTTTTGATTATTATTTCATATTTGTGGGGATTTAATTAACAGCTTAAAAGTGTTACTTGAAATGATAGTAGCCCAACGTACACTTTTATCTGGT

mRNA sequence

CTCGGTTATCTCGGCTGTCGATCGGCGAAGAGCGGTGACGGCAAGTTCCGATCAATTGTTCTCTCTTCCTCTGTTTCTTCGGCGGTTTTCTTCATCTTCTCAGTGTGAAATTTCATCTGCTGTGCGTCAATTCCCTTCTCGTAACATTTGAAGAACGTACCTTGATTCGAGCGGCTTTTCCAATTGGGGCTGAATTGTGTTCTACCGGAAGCGCTTTGTAATCTTCTAATATGGCTACTTTGGCCGATTCTTTTCTAGCCGATCTTGATGAACTCTCTGATGAAGACAAATTTCTGGAAGAAGAAGATGTTGATGGTGAAAATATGGAAGAGGATATTGATGGGGACCTTGCGGACCTAGAAAGCCTTAATTATGATGATCTGGATAGTGTTTCAAAATTGCAGAAAACACAGAGATACAATGATATAATGCAGAAAGTGGAAGATGCATTGGAGAAGGATTCTAGTTTCTCAAATCAAGGATTAGTATTGGAAGATGATCCTGAGTACCAATTGATTGTGGAGTGTAATGCTTTGTCTGTGGATATTGAAAACGAAATTATTATTATTCACAACTTTATACGTGATAAATATCGATTGAAGTTTCCAGAGCTTGAATCACTTGTGCACCACCCAATCGATTATGCTCGTGTTGTTAAGAAGATTGGGAATGAAATAGATTTGACTCTTGTAGATTTAGAAGGGCTTCTACCCTCTGCTGTCATTATGGTTGTCTCAGTTACCGCATCTACCACAAGTGGAAAGCCACTTCCAGAGGAAATCCTTCAGAAAACCATTGATGCGTGTGATCGGGCTCTTGCTTTAGATTCAGCTAAAAAAATGGTCCTTAATTTTGTTGAAAGCAGAATGGGATATATTGCACCAAATCTTTCTGCCATAGTTGGAAGTGCAGTTGCAGCAAAACTAATGGGAACTGCTGGCGGGCTTGGTGCTTTAGCTAAGATGCCTGCTTGCAATGTTCAACTTCTTGGTGCAAAGAAAAAAAACCTTGCTGGGTTTTCCACTGCAACTTCACAATTTCGGGTAGGTTATATTGAGCAAACAGAGATATTCCAATCAACACCTCCTCCTTTGAAGATGCGAGCTTGTCGACTGGTAGCTGCAAAATCAACACTTGCCTCACGAGTTGACTCCACCAGAGGGGATCCTACCGGAAAGACTGGACGAGTCTTCAAAGATGAGATCCTTAAAAAAATTGAGAAGTGGCAGGAACCTCCACCAGCAAAACAACCAAAACCTCTACCGGTCCCTGATTCTGAACCCAAAAAGAAGAGAGGTGGCCGTCGACTAAGGAAAATGAAGGAAAGATATGCAACAACAGAGATGAGGAAACTAGCAAACAGGATGCAGTTTGGGATTCCTGAAGAAAGTTCTTTAGGAGATGGATTAGGGGAAGGGTACGGAATGCTTGGTCAAGCTGGGAGTGGCAAGCTGCGTGTGTCAGCTGTTCAGAGCAAGCTTGGTGCGAAAGTCGTTAAGAAATTCAAGGAAAAACGATATGGAAGCAGTGGTGCTACATCTGGGCTGACGTCGAGTTTAGCATTTACACCTGTACAGGGTATTGAGCTGTCGAATCCTCAAGCTCATTTGAACCAGCTAGGAGGTGGAACTCAAAGCACCTACTTTTCTGAAACAGGAACATTTTCAAAGATCAGAAAAAACTAAAGTCATTAGAAAATCAAGCATCATCCTGTTTCATGGTCGTGCTATGTAAGCTTATTATATAGATATGCCTTATGATGACGCTTTGTAATTCAGTACTAAGAGAGAGCCACATACAATTTTTTGTTTTCAAAACTATAACCCGAAGGTTATTCTTTGTGCCTTGTTTTGATTATTATTTCATATTTGTGGGGATTTAATTAACAGCTTAAAAGTGTTACTTGAAATGATAGTAGCCCAACGTACACTTTTATCTGGT

Coding sequence (CDS)

ATGGCTACTTTGGCCGATTCTTTTCTAGCCGATCTTGATGAACTCTCTGATGAAGACAAATTTCTGGAAGAAGAAGATGTTGATGGTGAAAATATGGAAGAGGATATTGATGGGGACCTTGCGGACCTAGAAAGCCTTAATTATGATGATCTGGATAGTGTTTCAAAATTGCAGAAAACACAGAGATACAATGATATAATGCAGAAAGTGGAAGATGCATTGGAGAAGGATTCTAGTTTCTCAAATCAAGGATTAGTATTGGAAGATGATCCTGAGTACCAATTGATTGTGGAGTGTAATGCTTTGTCTGTGGATATTGAAAACGAAATTATTATTATTCACAACTTTATACGTGATAAATATCGATTGAAGTTTCCAGAGCTTGAATCACTTGTGCACCACCCAATCGATTATGCTCGTGTTGTTAAGAAGATTGGGAATGAAATAGATTTGACTCTTGTAGATTTAGAAGGGCTTCTACCCTCTGCTGTCATTATGGTTGTCTCAGTTACCGCATCTACCACAAGTGGAAAGCCACTTCCAGAGGAAATCCTTCAGAAAACCATTGATGCGTGTGATCGGGCTCTTGCTTTAGATTCAGCTAAAAAAATGGTCCTTAATTTTGTTGAAAGCAGAATGGGATATATTGCACCAAATCTTTCTGCCATAGTTGGAAGTGCAGTTGCAGCAAAACTAATGGGAACTGCTGGCGGGCTTGGTGCTTTAGCTAAGATGCCTGCTTGCAATGTTCAACTTCTTGGTGCAAAGAAAAAAAACCTTGCTGGGTTTTCCACTGCAACTTCACAATTTCGGGTAGGTTATATTGAGCAAACAGAGATATTCCAATCAACACCTCCTCCTTTGAAGATGCGAGCTTGTCGACTGGTAGCTGCAAAATCAACACTTGCCTCACGAGTTGACTCCACCAGAGGGGATCCTACCGGAAAGACTGGACGAGTCTTCAAAGATGAGATCCTTAAAAAAATTGAGAAGTGGCAGGAACCTCCACCAGCAAAACAACCAAAACCTCTACCGGTCCCTGATTCTGAACCCAAAAAGAAGAGAGGTGGCCGTCGACTAAGGAAAATGAAGGAAAGATATGCAACAACAGAGATGAGGAAACTAGCAAACAGGATGCAGTTTGGGATTCCTGAAGAAAGTTCTTTAGGAGATGGATTAGGGGAAGGGTACGGAATGCTTGGTCAAGCTGGGAGTGGCAAGCTGCGTGTGTCAGCTGTTCAGAGCAAGCTTGGTGCGAAAGTCGTTAAGAAATTCAAGGAAAAACGATATGGAAGCAGTGGTGCTACATCTGGGCTGACGTCGAGTTTAGCATTTACACCTGTACAGGGTATTGAGCTGTCGAATCCTCAAGCTCATTTGAACCAGCTAGGAGGTGGAACTCAAAGCACCTACTTTTCTGAAACAGGAACATTTTCAAAGATCAGAAAAAACTAA

Protein sequence

MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLGALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKSTLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSKIRKN

Homology

[Close]

BLAST of Sed0004453 vs. NCBI nr
Match: XP_022945419.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog [Cucurbita moschata] >XP_022945420.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog [Cucurbita moschata] >KAG6573747.1 U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 885.2 bits (2286), Expect = 2.6e-253
Identity = 467/484 (96.49%), Postives = 478/484 (98.76%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F +EEDVD ENMEEDIDGDLADLESLNYDDLD+VSKLQK+
Sbjct: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIMQKVEDAL+KDS+ SNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           +LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLV+AKS
Sbjct: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVSAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. NCBI nr
Match: XP_022151138.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 883.6 bits (2282), Expect = 7.5e-253
Identity = 467/484 (96.49%), Postives = 475/484 (98.14%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED FL+EEDVD ENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDVDAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVE AL+KDS+ SNQGLVLEDDPEYQLIVECN+LSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEGALQKDSNISNQGLVLEDDPEYQLIVECNSLSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRALALDSAKK VLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKKVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRL+AAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. NCBI nr
Match: XP_022956658.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita moschata] >XP_023004221.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita maxima] >XP_023526610.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita pepo subsp. pepo] >KAG6601489.1 U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 882.5 bits (2279), Expect = 1.7e-252
Identity = 467/484 (96.49%), Postives = 473/484 (97.73%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED FL+EED D ENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DALE DS+ SNQG VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRL+AAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. NCBI nr
Match: KAG7032269.1 (U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 880.6 bits (2274), Expect = 6.4e-252
Identity = 466/483 (96.48%), Postives = 472/483 (97.72%), Query Frame = 0


Query: 2   ATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKTQ 61
           ATLADSFLADLDELSDED FL+EED D ENMEEDIDGDLADLESLNYDDLDSVSKLQKTQ
Sbjct: 64  ATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQ 123

Query: 62  RYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY 121
           RYNDIMQKV DALE DS+ SNQG VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY
Sbjct: 124 RYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY 183

Query: 122 RLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP 181
           RLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP
Sbjct: 184 RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP 243

Query: 182 EEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLGA 241
           EEILQKTIDACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL A
Sbjct: 244 EEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLVA 303

Query: 242 LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKST 301
           LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRL+AAKST
Sbjct: 304 LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKST 363

Query: 302 LASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR 361
           LA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
Sbjct: 364 LAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR 423

Query: 362 KMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAKV 421
           KMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AKV
Sbjct: 424 KMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKV 483

Query: 422 VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSKI 481
           VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSKI
Sbjct: 484 VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSKI 543

Query: 482 RKN 485
           RKN
Sbjct: 544 RKN 546

[Close]

BLAST of Sed0004453 vs. NCBI nr
Match: XP_022966885.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog [Cucurbita maxima])

HSP 1 Score: 875.2 bits (2260), Expect = 2.7e-250
Identity = 462/484 (95.45%), Postives = 475/484 (98.14%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F +EEDVD ENMEEDIDGDLADLESLNYDDLD+VSKLQK+
Sbjct: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIMQKVEDAL+KDS+ SNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           +LAKMPACNVQLLGAKKKNLAGFSTATSQFR+GYIEQTEIFQSTPP LKMRACRLV+AKS
Sbjct: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAH+NQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. ExPASy Swiss-Prot
Match: Q8RXN6 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Arabidopsis thaliana OX=3702 GN=PRP31 PE=1 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 8.5e-199
Identity = 374/485 (77.11%), Postives = 419/485 (86.39%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATL DSFLADLDELSD +  L+E D D    EED+D D+ADLE+LNYDDLD+VSKLQK+
Sbjct: 1   MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY DIM KVE+AL KDS  + +G VLEDDPEY+LIV+CN LSVDIENEI+I+HNFI+DK
Sbjct: 61  QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           Y+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL  LLPSA+IMVVSVTA TT G  L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PE++LQK ++ACDRAL LDSA+K VL FVES+MG IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           ALAKMPACNVQ+LG K+KNLAGFS+ATSQ RVGY+EQTEI+QSTPP L+ RA RLVAAKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVD+TRGDP G +G+ F++EI KKIEKWQEPPPA+QPKPLPVPDSEPKK+RGGRRL
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKL--G 420
           RKMKERY  T+MRKLANRM FG PEESSLGDGLGEGYGMLGQAGS +LRVS+V SKL   
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420

Query: 421 AKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTF 480
           AKV KK KE++Y     TSGLTSSLAFTPVQGIEL NPQ  L  LG GTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 480

Query: 481 SKIRK 484
           SK++K
Sbjct: 481 SKLKK 484

[Close]

BLAST of Sed0004453 vs. ExPASy Swiss-Prot
Match: Q8CCF0 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 PE=1 SV=3)

HSP 1 Score: 381.3 bits (978), Expect = 1.6e-104
Identity = 233/496 (46.98%), Postives = 326/496 (65.73%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDK----FLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQ 62
           +LAD  LADL+E ++E++      EEE+   E+++E+   DL+       D + S++KL 
Sbjct: 2   SLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSG------DSVKSIAKLW 61

Query: 63  KTQRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIR 122
            ++ + +IM K+E+ + K ++ S     +E  PEY++IV+ N L+V+IENE+ IIH FIR
Sbjct: 62  DSKMFAEIMMKIEEYISKQANVSEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIR 121

Query: 123 DKYRLKFPELESLVHHPIDYARVVKKIGNEID--LTLVDLEGLLPSAVIMVVSVTASTTS 182
           DKY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT 
Sbjct: 122 DKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQ 181

Query: 183 GKPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTA 242
           G+ L +E L++  +ACD AL L+++K  +  +VESRM +IAPNLS I+G++ AAK+MG A
Sbjct: 182 GQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVA 241

Query: 243 GGLGALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLV 302
           GGL  L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RLV
Sbjct: 242 GGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLV 301

Query: 303 AAKSTLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRG 362
           AAK TLA+RVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRG
Sbjct: 302 AAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRG 361

Query: 363 GRRLRKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSK 422
           GRR RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R + V   
Sbjct: 362 GRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEA 421

Query: 423 LGAKVVKKFK---EKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGGG 482
             A++ K  +   +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++   
Sbjct: 422 TKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEA 481

[Close]

BLAST of Sed0004453 vs. ExPASy Swiss-Prot
Match: Q8WWY3 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens OX=9606 GN=PRPF31 PE=1 SV=2)

HSP 1 Score: 380.6 bits (976), Expect = 2.7e-104
Identity = 233/496 (46.98%), Postives = 325/496 (65.52%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDK----FLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQ 62
           +LAD  LADL+E ++E++      EEE+   E+++E+   DL+       D + +++KL 
Sbjct: 2   SLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSG------DSVKTIAKLW 61

Query: 63  KTQRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIR 122
            ++ + +IM K+E+ + K +  S     +E  PEY++IV+ N L+V+IENE+ IIH FIR
Sbjct: 62  DSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIR 121

Query: 123 DKYRLKFPELESLVHHPIDYARVVKKIGNEID--LTLVDLEGLLPSAVIMVVSVTASTTS 182
           DKY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT 
Sbjct: 122 DKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQ 181

Query: 183 GKPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTA 242
           G+ L EE L++  +ACD AL L+++K  +  +VESRM +IAPNLS I+G++ AAK+MG A
Sbjct: 182 GQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVA 241

Query: 243 GGLGALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLV 302
           GGL  L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RLV
Sbjct: 242 GGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLV 301

Query: 303 AAKSTLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRG 362
           AAK TLA+RVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRG
Sbjct: 302 AAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRG 361

Query: 363 GRRLRKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSK 422
           GRR RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R + V   
Sbjct: 362 GRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEA 421

Query: 423 LGAKVVKKFK---EKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGGG 482
             A++ K  +   +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++   
Sbjct: 422 TKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEA 481

[Close]

BLAST of Sed0004453 vs. ExPASy Swiss-Prot
Match: Q5U5C5 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis OX=8355 GN=prpf31 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.7e-104
Identity = 234/494 (47.37%), Postives = 325/494 (65.79%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDKFLEEEDVDGENME--EDIDGDLADLESLNYDDLDSVSKLQKT 62
           +LAD  LADL+E ++E+   EE  +D +++E  E++D ++     LN + + S++KL  +
Sbjct: 2   SLADELLADLEEAAEEE---EENLIDEDDLETIEEVDEEMQ--VDLNAESVKSIAKLSDS 61

Query: 63  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 122
           + +++I+ K+E  ++K    S     +E  PEY++IV+ N L+V+IENE+ IIH FIRDK
Sbjct: 62  KLFSEILLKIEGYIQKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDK 121

Query: 123 YRLKFPELESLVHHPIDYARVVKKIGNEID--LTLVDLEGLLPSAVIMVVSVTASTTSGK 182
           Y  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G+
Sbjct: 122 YSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQ 181

Query: 183 PLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGG 242
            L +E L++  +ACD AL L+ +K  +  +VESRM +IAPNLS IVG++ AAK+MG AGG
Sbjct: 182 QLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGG 241

Query: 243 LGALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAA 302
           L  L+KMPACNV LLGA++K L GFS+ +     GYI  +EI QS P  L  +A RLV+A
Sbjct: 242 LTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIVQSLPSDLHRKAARLVSA 301

Query: 303 KSTLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR 362
           K TLASRVDS   +P GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGGR
Sbjct: 302 KCTLASRVDSFHENPEGKIGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGR 361

Query: 363 RLRKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLG 422
           R RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R + V     
Sbjct: 362 RYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATK 421

Query: 423 AKVVKKFK---EKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQ 482
           A++ K  +   +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    Q
Sbjct: 422 ARISKTLQRTLQKQSVVYGGKSTVRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQ 481

[Close]

BLAST of Sed0004453 vs. ExPASy Swiss-Prot
Match: Q6NVP6 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis OX=8364 GN=prpf31 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.9e-102
Identity = 229/495 (46.26%), Postives = 325/495 (65.66%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDK--FLEEEDVDG-ENMEEDIDGDLADLESLNYDDLDSVSKLQK 62
           +LAD  LADL+E ++E++   ++E+D++  E ++E++  D      LN + + S++KL  
Sbjct: 2   SLADELLADLEEAAEEEEENLIDEDDLETIEEVQEEMQVD------LNAESVKSIAKLSD 61

Query: 63  TQRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 122
           ++ +++I+ K++  ++K    S     +E  PEY++IV+ N L+V+IENE+ IIH FIRD
Sbjct: 62  SKLFSEILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRD 121

Query: 123 KYRLKFPELESLVHHPIDYARVVKKIGNEID--LTLVDLEGLLPSAVIMVVSVTASTTSG 182
           KY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G
Sbjct: 122 KYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQG 181

Query: 183 KPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAG 242
           + L +E L++  +ACD AL L+ +K  +  +VESRM +IAPNLS IVG++ AAK+MG AG
Sbjct: 182 QQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAG 241

Query: 243 GLGALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVA 302
           GL  L+KMPACNV LLGA++K L+GFS+ +     GYI  ++I QS PP L  +A RLV+
Sbjct: 242 GLTNLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVS 301

Query: 303 AKSTLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGG 362
           AK TLA+RVDS      GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGG
Sbjct: 302 AKCTLAARVDSFHESSEGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGG 361

Query: 363 RRLRKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKL 422
           RR RKMKER   TE+RK ANRM F   EE +  + LG   G LG++GSG++R + V    
Sbjct: 362 RRYRKMKERLGLTEIRKQANRMSFAEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEAT 421

Query: 423 GAKVVKKFK---EKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGGGT 482
            A++ K  +   +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    
Sbjct: 422 KARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEAN 481

[Close]

BLAST of Sed0004453 vs. ExPASy TrEMBL
Match: A0A6J1G0W2 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449657 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.3e-253
Identity = 467/484 (96.49%), Postives = 478/484 (98.76%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F +EEDVD ENMEEDIDGDLADLESLNYDDLD+VSKLQK+
Sbjct: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIMQKVEDAL+KDS+ SNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           +LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLV+AKS
Sbjct: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVSAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. ExPASy TrEMBL
Match: A0A6J1DBC9 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019139 PE=3 SV=1)

HSP 1 Score: 883.6 bits (2282), Expect = 3.6e-253
Identity = 467/484 (96.49%), Postives = 475/484 (98.14%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED FL+EEDVD ENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDVDAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVE AL+KDS+ SNQGLVLEDDPEYQLIVECN+LSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEGALQKDSNISNQGLVLEDDPEYQLIVECNSLSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRALALDSAKK VLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKKVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRL+AAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. ExPASy TrEMBL
Match: A0A6J1KRI6 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497587 PE=3 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 8.1e-253
Identity = 467/484 (96.49%), Postives = 473/484 (97.73%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED FL+EED D ENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DALE DS+ SNQG VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRL+AAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. ExPASy TrEMBL
Match: A0A6J1GXP7 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458320 PE=3 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 8.1e-253
Identity = 467/484 (96.49%), Postives = 473/484 (97.73%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED FL+EED D ENMEEDIDGDLADLESLNYDDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DALE DS+ SNQG VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRAL LDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRL+AAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. ExPASy TrEMBL
Match: A0A6J1HSU1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466452 PE=3 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 1.3e-250
Identity = 462/484 (95.45%), Postives = 475/484 (98.14%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F +EEDVD ENMEEDIDGDLADLESLNYDDLD+VSKLQK+
Sbjct: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIMQKVEDAL+KDS+ SNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           +LAKMPACNVQLLGAKKKNLAGFSTATSQFR+GYIEQTEIFQSTPP LKMRACRLV+AKS
Sbjct: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKLGAK 420
           RKMKERYATTEMRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKL AK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAH+NQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Sed0004453 vs. TAIR 10
Match: AT1G60170.1 (pre-mRNA processing ribonucleoprotein binding region-containing protein )

HSP 1 Score: 694.5 bits (1791), Expect = 6.0e-200
Identity = 374/485 (77.11%), Postives = 419/485 (86.39%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFLEEEDVDGENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60
           MATL DSFLADLDELSD +  L+E D D    EED+D D+ADLE+LNYDDLD+VSKLQK+
Sbjct: 1   MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY DIM KVE+AL KDS  + +G VLEDDPEY+LIV+CN LSVDIENEI+I+HNFI+DK
Sbjct: 61  QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           Y+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL  LLPSA+IMVVSVTA TT G  L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG 240
           PE++LQK ++ACDRAL LDSA+K VL FVES+MG IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKS 300
           ALAKMPACNVQ+LG K+KNLAGFS+ATSQ RVGY+EQTEI+QSTPP L+ RA RLVAAKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300

Query: 301 TLASRVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLA+RVD+TRGDP G +G+ F++EI KKIEKWQEPPPA+QPKPLPVPDSEPKK+RGGRRL
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAVQSKL--G 420
           RKMKERY  T+MRKLANRM FG PEESSLGDGLGEGYGMLGQAGS +LRVS+V SKL   
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420

Query: 421 AKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTF 480
           AKV KK KE++Y     TSGLTSSLAFTPVQGIEL NPQ  L  LG GTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 480

Query: 481 SKIRK 484
           SK++K
Sbjct: 481 SKLKK 484

[Close]

BLAST of Sed0004453 vs. TAIR 10
Match: AT1G70400.1 (CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 479 Blast hits to 479 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 138; Plants - 124; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). )

HSP 1 Score: 211.1 bits (536), Expect = 2.0e-54
Identity = 117/172 (68.02%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 39  DLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVE 98
           D+ +L +L YDDLDSVSKLQK++RY DIMQ+VE+ALE        G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNE+DL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLNFVE 211
           LLPSA+IMV+ VTA TT G  LPE++L KTIDACDRAL LDSA+K VL FV+
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARKKVLEFVD 162

[Close]

BLAST of Sed0004453 vs. TAIR 10
Match: AT1G70400.2 (CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 203.8 bits (517), Expect = 3.2e-52
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 39  DLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVE 98
           D+ +L +L YDDLDSVSKLQK++RY DIMQ+VE+ALE        G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNE+DL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKK 204
           LLPSA+IMV+ VTA TT G  LPE++L KTIDACDRAL LDSA+K
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARK 155

[Close]

BLAST of Sed0004453 vs. TAIR 10
Match: AT1G70400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 484 Blast hits to 484 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 134; Plants - 124; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). )

HSP 1 Score: 203.8 bits (517), Expect = 3.2e-52
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 39  DLADLESLNYDDLDSVSKLQKTQRYNDIMQKVEDALEKDSSFSNQGLVLEDDPEYQLIVE 98
           D+ +L +L YDDLDSVSKLQK++RY DIMQ+VE+ALE        G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNE+DL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKK 204
           LLPSA+IMV+ VTA TT G  LPE++L KTIDACDRAL LDSA+K
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARK 155

[Close]

BLAST of Sed0004453 vs. TAIR 10
Match: AT3G05060.1 (NOP56-like pre RNA processing ribonucleoprotein )

HSP 1 Score: 100.5 bits (249), Expect = 3.8e-21
Identity = 71/239 (29.71%), Postives = 116/239 (48.54%), Query Frame = 0


Query: 79  SFSNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDY 138
           S +   L    D    +I++   L  D++ E+      +R+ Y   FPEL  ++   I Y
Sbjct: 144 SLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILY 203

Query: 139 ARVVKKIGNEIDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALAL 198
           A+ VK +GN ++   +D   +L   +   +   A  + G  + +  L    + CD+ L+L
Sbjct: 204 AKSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELCDQVLSL 263

Query: 199 DSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLGALAKMPACNVQLLGAKKK 258
              +  + ++++SRM  IAPNL+A+VG  V A+L+   G L  L+K P   VQ+LGA+K 
Sbjct: 264 SEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKA 323

Query: 259 NLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVAAKSTLASRVDSTRGDPTGKT 318
                 T  +  + G I    +     P  K +  R +AAK+ LA RVD+  GD    T
Sbjct: 324 LFRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDAL-GDSQDNT 381

The following BLAST results are available for this feature:

BLAST of Sed0004453 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945419.1	2.6e-253	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog [Cucurbita moschata] >XP_022...	[more]
XP_022151138.1	7.5e-253	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Momordica charan...	[more]
XP_022956658.1	1.7e-252	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita moscha...	[more]
KAG7032269.1	6.4e-252	96.48	U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita arg...	[more]
XP_022966885.1	2.7e-250	95.45	U4/U6 small nuclear ribonucleoprotein Prp31 homolog [Cucurbita maxima]	[more]

BLAST of Sed0004453 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXN6	8.5e-199	77.11	U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Arabidopsis thaliana OX=3...	[more]
Q8CCF0	1.6e-104	46.98	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 P...	[more]
Q8WWY3	2.7e-104	46.98	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens OX=9606 GN=PRPF31 PE...	[more]
Q5U5C5	2.7e-104	47.37	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis OX=8355 GN=prpf31 ...	[more]
Q6NVP6	1.9e-102	46.26	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis OX=8364 GN=prp...	[more]

BLAST of Sed0004453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0W2	1.3e-253	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Cucurbita moschata OX=366...	[more]
A0A6J1DBC9	3.6e-253	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Momordica char...	[more]
A0A6J1KRI6	8.1e-253	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1GXP7	8.1e-253	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1HSU1	1.3e-250	95.45	U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Sed0004453 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60170.1	6.0e-200	77.11	pre-mRNA processing ribonucleoprotein binding region-containing protein	[more]
AT1G70400.1	2.0e-54	68.02	CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thalian...	[more]
AT1G70400.2	3.2e-52	68.48	CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thalian...	[more]
AT1G70400.3	3.2e-52	68.48	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G05060.1	3.8e-21	29.71	NOP56-like pre RNA processing ribonucleoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	GENE3D	1.10.287.4070		coord: 79..216 e-value: 1.6E-56 score: 192.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..373
IPR012976	NOSIC	SMART	SM00931	NOSIC_2	coord: 95..147 e-value: 6.4E-23 score: 92.1
IPR002687	Nop domain	PFAM	PF01798	Nop	coord: 103..331 e-value: 3.3E-72 score: 242.6
IPR002687	Nop domain	PROSITE	PS51358	NOP	coord: 216..334 score: 36.887115
IPR019175	Prp31 C-terminal	PFAM	PF09785	Prp31_C	coord: 339..424 e-value: 5.4E-31 score: 108.1
IPR042239	Nop, C-terminal domain	GENE3D	1.10.246.90	Nop domain	coord: 217..342 e-value: 3.5E-40 score: 138.6
IPR027105	U4/U6 small nuclear ribonucleoprotein Prp31	PANTHER	PTHR13904	PRE-MRNA SPLICING FACTOR PRP31	coord: 1..424
IPR036070	Nop domain superfamily	SUPERFAMILY	89124	Nop domain	coord: 88..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004453.1	Sed0004453.1	mRNA
Sed0004453.2	Sed0004453.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000244	spliceosomal tri-snRNP complex assembly
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005687	U4 snRNP
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0003723	RNA binding