Homology
BLAST of Sed0004444 vs. NCBI nr
Match:
XP_038877228.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa hispida])
HSP 1 Score: 873.6 bits (2256), Expect = 8.2e-250
Identity = 427/524 (81.49%), Postives = 469/524 (89.50%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFRPDSNPTS------PTKIIFPRSANSSNH----KFTANSIDPIVVW 60
M+S ++TAIP++ + NP S PTK+ FPRS NSS+ KF ANSIDPIV+W
Sbjct: 1 MSSSPSYTAIPSQLQQYPNPPSSIPLSNPTKLNFPRSPNSSHRNISSKFPANSIDPIVLW 60
Query: 61 TSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYA 120
TSS+AR+CRNGQL+EAA E TRMRLAGVEPNH+TFITL+SGC DFPS SL+FGSSLHGYA
Sbjct: 61 TSSLARYCRNGQLSEAATEFTRMRLAGVEPNHVTFITLLSGCTDFPSESLFFGSSLHGYA 120
Query: 121 RKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFA 180
RK GLDTGHVMVGTAL+ MY+K Q L RKVFDYLGMKNSVTWNTMLDGY RNGE+E A
Sbjct: 121 RKLGLDTGHVMVGTALVDMYAKCAQSRLARKVFDYLGMKNSVTWNTMLDGYTRNGEIELA 180
Query: 181 LNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADL 240
++LFDEMPTRDAISWTALINGLLKQG+SEQALECFH MQCSG+EPDYVS+IAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGFSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
Query: 241 GTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSII 300
G LTLGLWVNRFVMQQEFK NIR++NSL+DMYSRCGCI FARQVFEKMP RTLVSWNSII
Sbjct: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLVDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
Query: 301 VGFAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRI 360
VGFAVN +A+ESLEFFDAMQ EGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKR+H+I
Sbjct: 301 VGFAVNGFADESLEFFDAMQNEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRIHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMK 420
TPRIEHYGCIVDLYGRAGRLE+AL+VIE+MP+KPNEVVLGSLLAACRT+GDVSLAE+LMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTYGDVSLAEKLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
HL KLDP GDSNYVLLSNIYA+IG+WEGANKVRRTMKARGVQKKPG SSVEIDGKVHEFV
Sbjct: 421 HLSKLDPRGDSNYVLLSNIYAAIGRWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
Query: 481 SGDKYHDDADNIYSMLGLLFHELEICGYVPEKD------ESSKD 509
+GDKYH DADNIYSML LLFHEL+I GYVP+ + E SKD
Sbjct: 481 AGDKYHADADNIYSMLELLFHELKIYGYVPDTNIILNTKEFSKD 524
BLAST of Sed0004444 vs. NCBI nr
Match:
XP_022142716.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica charantia])
HSP 1 Score: 871.3 bits (2250), Expect = 4.1e-249
Identity = 428/524 (81.68%), Postives = 464/524 (88.55%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFRPDSNPT------SPTKIIFPRSANSSNH----KFTANSIDPIVVW 60
M+SI A+TA + + NP +P I FPRS NSSN K T NSIDPIV+W
Sbjct: 1 MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60
Query: 61 TSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYA 120
TSSIAR+CRNGQLAEAAAE T MRLAGVEPNH+T ITL+SGCADFPS SLYFGSSLHGYA
Sbjct: 61 TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120
Query: 121 RKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFA 180
RK GLDT HVMVGT+++ MY+K QLGL R+VFDYL MKNSV+WNTMLDGY RNGE+E A
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180
Query: 181 LNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADL 240
++LFDEMPTRDAISWTALINGLLKQGYSEQALECFH MQCSG++PDYVS+IAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240
Query: 241 GTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSII 300
GTLTLGLWVNRFVMQQEFK NIR++NSLIDMYSRCGCIGFARQVFE+M RTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300
Query: 301 VGFAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRI 360
VG+A N +A+ESLEFFDAMQ+EGFKPD VSYTGALTACSHAGLVNKGLELFDNMKR+HRI
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMK 420
PRIEHYGCIVDLYGRAGRLE+AL VIEKMP+KPNEVVLGSLLAACRTHGDVSLAERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
HL KLDPGGDSNYVLLSNIYA+IGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
Query: 481 SGDKYHDDADNIYSMLGLLFHELEICGYVPEKD------ESSKD 509
+GDKYH DAD+IYSML LL HEL+ICG VPE + ESSKD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524
BLAST of Sed0004444 vs. NCBI nr
Match:
XP_023521260.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 859.4 bits (2219), Expect = 1.6e-245
Identity = 415/515 (80.58%), Postives = 462/515 (89.71%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFR-PDSNPTSPTKIIFPRSANSSNHKFTANSIDPIVVWTSSIARHCR 60
M+S+ AHTA+P +F+ + ++P+ + FPR NSS N I PIV+WTSSIAR+CR
Sbjct: 1 MSSVPAHTAVPFQFQLQQYSNSNPSNLNFPRYPNSS------NPIKPIVLWTSSIARYCR 60
Query: 61 NGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARKFGLDTGH 120
N QL EAAAE TRMRLAGVEPNHITFITL+SGCADFPS SL+FG+SLHGY RK GLDTGH
Sbjct: 61 NDQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHGYVRKLGLDTGH 120
Query: 121 VMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLFDEMPT 180
VMVGTALI MY+K QLGL R VFDYL MKNSVTWNTMLDGYMRNGE+E A+ LFDEMPT
Sbjct: 121 VMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIELAIELFDEMPT 180
Query: 181 RDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADLGTLTLGLWV 240
RDAISWTALING LKQGYSEQALECFH MQCSG+EPDYVS+IAVLAACADLG L+ GLWV
Sbjct: 181 RDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACADLGALSFGLWV 240
Query: 241 NRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGFAVNSYA 300
NRF+MQQEFK NIR++NSLIDMYSRCGCI FARQVF+KMP RTLVSWNS+IVGFA+N +A
Sbjct: 241 NRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMPKRTLVSWNSMIVGFAINGFA 300
Query: 301 EESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITPRIEHYGC 360
+ESLEFFDAMQ+EGFK DGVSYTGALTACSHAGLVNKGLELFDNMKR+HRITPRIEHYGC
Sbjct: 301 DESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVHRITPRIEHYGC 360
Query: 361 IVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHLFKLDPGG 420
IVDLY RAGRL+EAL+VIE MP+KPNEVVLGSLLAACRTHGDVSLAERL+K+LF+LDPGG
Sbjct: 361 IVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERLIKYLFELDPGG 420
Query: 421 DSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGDKYHDDA 480
DS+YVLLSNIYA++G+WEGANKVRRTMKARGVQKKPGFSS+EIDGKVHEFV+GDKYH DA
Sbjct: 421 DSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHEFVAGDKYHADA 480
Query: 481 DNIYSMLGLLFHELEICGYVPEK------DESSKD 509
DNIYSML +LFHEL+ICGYVPE +ESSK+
Sbjct: 481 DNIYSMLEVLFHELKICGYVPETATLMNGNESSKE 509
BLAST of Sed0004444 vs. NCBI nr
Match:
KAG7012718.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 857.4 bits (2214), Expect = 6.1e-245
Identity = 414/515 (80.39%), Postives = 462/515 (89.71%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFR-PDSNPTSPTKIIFPRSANSSNHKFTANSIDPIVVWTSSIARHCR 60
M+S+ AHTAIP +F+ + ++P+ + FPR NSS N I PIV+WTSSIAR+CR
Sbjct: 1 MSSVPAHTAIPFQFQLQQYSNSNPSNLNFPRYPNSS------NPIKPIVLWTSSIARYCR 60
Query: 61 NGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARKFGLDTGH 120
N QLAEAAAE TRMRLAGVEPNHITFITL+SGCADFPS SL+FG+SLHGY RK GLDTGH
Sbjct: 61 NAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHGYVRKLGLDTGH 120
Query: 121 VMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLFDEMPT 180
VMVGTALI MY+K QLGL R VFDYL MKNSVTWNTMLDGYMRNGE+E A+ LFDEMPT
Sbjct: 121 VMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIELAIELFDEMPT 180
Query: 181 RDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADLGTLTLGLWV 240
RDAISWTALING LKQGYSEQAL+CFH MQCSG+EPDYVS+IAVLAACADLG L+ GLWV
Sbjct: 181 RDAISWTALINGFLKQGYSEQALDCFHEMQCSGIEPDYVSIIAVLAACADLGALSFGLWV 240
Query: 241 NRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGFAVNSYA 300
NRF+MQQEFK NIR++NSLIDMYSRCGCI F+RQVF+KMP RTLVSWNS+IVGFA+N +A
Sbjct: 241 NRFLMQQEFKDNIRISNSLIDMYSRCGCIEFSRQVFDKMPKRTLVSWNSMIVGFAINGFA 300
Query: 301 EESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITPRIEHYGC 360
+ESLEFFDAMQ+EGFK DGVSYTGALTACSHAGLVNKGLELFDNMKR+HRITPRIEHYGC
Sbjct: 301 DESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVHRITPRIEHYGC 360
Query: 361 IVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHLFKLDPGG 420
IVDLY RAGRL+EAL+VIE MP+KPNEVVLGSLLAACRTHGDVSLAERL+K+LF+LDPGG
Sbjct: 361 IVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERLIKYLFELDPGG 420
Query: 421 DSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGDKYHDDA 480
DS+YVLLSNIYA++G+WEGAN VRRTMKARGVQKKPGFSS+EIDGKVHEFV+GDKYH DA
Sbjct: 421 DSSYVLLSNIYAAVGRWEGANMVRRTMKARGVQKKPGFSSIEIDGKVHEFVAGDKYHADA 480
Query: 481 DNIYSMLGLLFHELEICGYVPEK------DESSKD 509
DNIYSML +LFHEL+ICGYVPE +ESSK+
Sbjct: 481 DNIYSMLEVLFHELKICGYVPETATFMNGNESSKE 509
BLAST of Sed0004444 vs. NCBI nr
Match:
XP_022945035.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita moschata])
HSP 1 Score: 855.5 bits (2209), Expect = 2.3e-244
Identity = 414/515 (80.39%), Postives = 460/515 (89.32%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFR-PDSNPTSPTKIIFPRSANSSNHKFTANSIDPIVVWTSSIARHCR 60
M+S+ AHTAIP +F+ + ++P+ + FPR NSS N I PIV+WTSSIAR+CR
Sbjct: 1 MSSVPAHTAIPFQFQLQQYSNSNPSNLNFPRYPNSS------NPIKPIVLWTSSIARYCR 60
Query: 61 NGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARKFGLDTGH 120
N QL EAAAE TRMRLAGVEPNHITFITL+SGCADFPS SL+FG+SLHGY RK GLDTGH
Sbjct: 61 NAQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHGYVRKLGLDTGH 120
Query: 121 VMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLFDEMPT 180
VMVGTALI MY+K QLGL R VFDYL MKNSVTWNTMLDGYMRNGE+E A+ LFDEMPT
Sbjct: 121 VMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIELAIELFDEMPT 180
Query: 181 RDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADLGTLTLGLWV 240
RDAISWTALING LKQGYSEQAL+CFH MQCSG+EPDYVS+IAVLAACADLG L+ GLWV
Sbjct: 181 RDAISWTALINGFLKQGYSEQALDCFHEMQCSGIEPDYVSIIAVLAACADLGALSFGLWV 240
Query: 241 NRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGFAVNSYA 300
NRF+MQQEFK NIR++NSLIDMYSRCGCI FARQVF+KMP RTLVSWNS+IVGFA N +A
Sbjct: 241 NRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMPKRTLVSWNSMIVGFATNGFA 300
Query: 301 EESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITPRIEHYGC 360
+ESLEFFDAMQ+EGFK DGVSYTGALTACSHAGLVNKGLELFDNMKR+HRITPRIEHYGC
Sbjct: 301 DESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVHRITPRIEHYGC 360
Query: 361 IVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHLFKLDPGG 420
IVDLY RAGRL+EAL+VIE MP+KPNEVVLGSLLAACRTHGDVSLAERL+K+LF+LDPGG
Sbjct: 361 IVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERLIKYLFELDPGG 420
Query: 421 DSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGDKYHDDA 480
DS+YVLLSNIYA++G+WEGAN VRRTMKARGVQKKPGFSS+EIDGKVHEFV+GDKYH DA
Sbjct: 421 DSSYVLLSNIYAAVGRWEGANMVRRTMKARGVQKKPGFSSIEIDGKVHEFVAGDKYHADA 480
Query: 481 DNIYSMLGLLFHELEICGYVPEK------DESSKD 509
DNIYSML +LFHEL+ICGYVPE +ESSK+
Sbjct: 481 DNIYSMLEVLFHELKICGYVPETATFMNGNESSKE 509
BLAST of Sed0004444 vs. ExPASy Swiss-Prot
Match:
Q9MA50 (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE247 PE=2 SV=1)
HSP 1 Score: 589.7 bits (1519), Expect = 3.1e-167
Identity = 288/482 (59.75%), Postives = 357/482 (74.07%), Query Frame = 0
Query: 21 TSPTKIIFPRSANSSNHKFTANSIDPIVVWTSSIARHCRNGQLAEAAAELTRMRLAGVEP 80
TSP I AN + ++ + V WTS I RNG+LAEAA E + M LAGVEP
Sbjct: 10 TSPALITHKNHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEP 69
Query: 81 NHITFITLISGCADFPSRSLYFGSSLHGYARKFGLDTGHVMVGTALIGMYSKFGQLGLGR 140
NHITFI L+SGC DF S S G LHGYA K GLD HVMVGTA+IGMYSK G+ R
Sbjct: 70 NHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKAR 129
Query: 141 KVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLFDEMPTRDAISWTALINGLLKQGYSEQ 200
VFDY+ KNSVTWNTM+DGYMR+G+V+ A +FD+MP RD ISWTA+ING +K+GY E+
Sbjct: 130 LVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEE 189
Query: 201 ALECFHLMQCSGVEPDYVSVIAVLAACADLGTLTLGLWVNRFVMQQEFKGNIRVNNSLID 260
AL F MQ SGV+PDYV++IA L AC +LG L+ GLWV+R+V+ Q+FK N+RV+NSLID
Sbjct: 190 ALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLID 249
Query: 261 MYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGFAVNSYAEESLEFFDAMQREGFKPDGVS 320
+Y RCGC+ FARQVF M RT+VSWNS+IVGFA N A ESL +F MQ +GFKPD V+
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 321 YTGALTACSHAGLVNKGLELFDNMKRMHRITPRIEHYGCIVDLYGRAGRLEEALSVIEKM 380
+TGALTACSH GLV +GL F MK +RI+PRIEHYGC+VDLY RAGRLE+AL +++ M
Sbjct: 310 FTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Query: 381 PLKPNEVVLGSLLAACRTHG-DVSLAERLMKHLFKLDPGGDSNYVLLSNIYASIGKWEGA 440
P+KPNEVV+GSLLAAC HG ++ LAERLMKHL L+ SNYV+LSN+YA+ GKWEGA
Sbjct: 370 PMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGA 429
Query: 441 NKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGDKYHDDADNIYSMLGLLFHELEICGYV 500
+K+RR MK G++K+PGFSS+EID +H F++GD H + I +L L+ +L + G V
Sbjct: 430 SKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489
Query: 501 PE 502
E
Sbjct: 490 VE 491
BLAST of Sed0004444 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 8.6e-101
Identity = 181/448 (40.40%), Postives = 276/448 (61.61%), Query Frame = 0
Query: 55 ARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARKFG 114
+ + R G EA M +GV P+ I+ ++ IS C+ R++ +G S HGY + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369
Query: 115 LDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLF 174
++ + ALI MY K + ++FD + K VTWN+++ GY+ NGEV+ A F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429
Query: 175 DEMPTRDAISWTALINGLLKQGYSEQALECFHLMQC-SGVEPDYVSVIAVLAACADLGTL 234
+ MP ++ +SW +I+GL++ E+A+E F MQ GV D V+++++ +AC LG L
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489
Query: 235 TLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGF 294
L W+ ++ + + ++R+ +L+DM+SRCG A +F + NR + +W + I
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549
Query: 295 AVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITPR 354
A+ AE ++E FD M +G KPDGV++ GALTACSH GLV +G E+F +M ++H ++P
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609
Query: 355 IEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHLF 414
HYGC+VDL GRAG LEEA+ +IE MP++PN+V+ SLLAACR G+V +A + +
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669
Query: 415 KLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGD 474
L P +YVLLSN+YAS G+W KVR +MK +G++K PG SS++I GK HEF SGD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729
Query: 475 KYHDDADNIYSMLGLLFHELEICGYVPE 502
+ H + NI +ML + G+VP+
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHVPD 754
BLAST of Sed0004444 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 354.4 bits (908), Expect = 2.2e-96
Identity = 171/471 (36.31%), Postives = 285/471 (60.51%), Query Frame = 0
Query: 33 NSSNHKFTANSIDPIVVWTSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGC 92
N + + F S +V W + I R+CR G + EA M+ + V P+ + ++S C
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 93 ADFPSRSLYFGSSLHGY--ARKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKN 152
+ ++ + +++ + +DT H++ TAL+ MY+ G + + R+ F + ++N
Sbjct: 223 G--RTGNMRYNRAIYEFLIENDVRMDT-HLL--TALVTMYAGAGCMDMAREFFRKMSVRN 282
Query: 153 SVTWNTMLDGYMRNGEVEFALNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQC 212
M+ GY + G ++ A +FD+ +D + WT +I+ ++ Y ++AL F M C
Sbjct: 283 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 342
Query: 213 SGVEPDYVSVIAVLAACADLGTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGF 272
SG++PD VS+ +V++ACA+LG L WV+ + + + +NN+LI+MY++CG +
Sbjct: 343 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 402
Query: 273 ARQVFEKMPNRTLVSWNSIIVGFAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSH 332
R VFEKMP R +VSW+S+I +++ A ++L F M++E +P+ V++ G L CSH
Sbjct: 403 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 462
Query: 333 AGLVNKGLELFDNMKRMHRITPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLG 392
+GLV +G ++F +M + ITP++EHYGC+VDL+GRA L EAL VIE MP+ N V+ G
Sbjct: 463 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 522
Query: 393 SLLAACRTHGDVSLAERLMKHLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARG 452
SL++ACR HG++ L + K + +L+P D VL+SNIYA +WE +RR M+ +
Sbjct: 523 SLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKN 582
Query: 453 VQKKPGFSSVEIDGKVHEFVSGDKYHDDADNIYSMLGLLFHELEICGYVPE 502
V K+ G S ++ +GK HEF+ GDK H ++ IY+ L + +L++ GYVP+
Sbjct: 583 VFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
BLAST of Sed0004444 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 349.7 bits (896), Expect = 5.4e-95
Identity = 176/469 (37.53%), Postives = 280/469 (59.70%), Query Frame = 0
Query: 43 SIDP-IVVWTSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLY 102
+IDP + ++T++I NG +A ++ + + PN TF +L+ C S
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC------STK 149
Query: 103 FGSSLHGYARKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGY 162
G +H + KFGL V T L+ +Y+K G + +KVFD + ++ V+ M+ Y
Sbjct: 150 SGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 209
Query: 163 MRNGEVEFALNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSG-VEPDYVSV 222
+ G VE A LFD M RD +SW +I+G + G+ AL F + G +PD ++V
Sbjct: 210 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 269
Query: 223 IAVLAACADLGTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPN 282
+A L+AC+ +G L G W++ FV + N++V LIDMYS+CG + A VF P
Sbjct: 270 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 329
Query: 283 RTLVSWNSIIVGFAVNSYAEESLEFFDAMQR-EGFKPDGVSYTGALTACSHAGLVNKGLE 342
+ +V+WN++I G+A++ Y++++L F+ MQ G +P +++ G L AC+HAGLVN+G+
Sbjct: 330 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 389
Query: 343 LFDNMKRMHRITPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTH 402
+F++M + + I P+IEHYGC+V L GRAG+L+ A I+ M + + V+ S+L +C+ H
Sbjct: 390 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 449
Query: 403 GDVSLAERLMKHLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSS 462
GD L + + ++L L+ YVLLSNIYAS+G +EG KVR MK +G+ K+PG S+
Sbjct: 450 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 509
Query: 463 VEIDGKVHEFVSGDKYHDDADNIYSMLGLLFHELEICGYVPEKDESSKD 509
+EI+ KVHEF +GD+ H + IY+ML + ++ GYVP + +D
Sbjct: 510 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQD 551
BLAST of Sed0004444 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 349.4 bits (895), Expect = 7.0e-95
Identity = 168/464 (36.21%), Postives = 279/464 (60.13%), Query Frame = 0
Query: 39 FTANSIDPIVVWTSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSR 98
FT +V W S I + G +A +M V+ +H+T + ++S CA R
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--R 248
Query: 99 SLYFGSSLHGYARKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTML 158
+L FG + Y + ++ ++ + A++ MY+K G + +++FD + K++VTW TML
Sbjct: 249 NLEFGRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308
Query: 159 DGYMRNGEVEFALNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQC-SGVEPDY 218
DGY + + E A + + MP +D ++W ALI+ + G +AL FH +Q ++ +
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 368
Query: 219 VSVIAVLAACADLGTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEK 278
+++++ L+ACA +G L LG W++ ++ + + N V ++LI MYS+CG + +R+VF
Sbjct: 369 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 428
Query: 279 MPNRTLVSWNSIIVGFAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKG 338
+ R + W+++I G A++ E+++ F MQ KP+GV++T ACSH GLV++
Sbjct: 429 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 488
Query: 339 LELFDNMKRMHRITPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACR 398
LF M+ + I P +HY CIVD+ GR+G LE+A+ IE MP+ P+ V G+LL AC+
Sbjct: 489 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 548
Query: 399 THGDVSLAERLMKHLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGF 458
H +++LAE L +L+P D +VLLSNIYA +GKWE +++R+ M+ G++K+PG
Sbjct: 549 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 608
Query: 459 SSVEIDGKVHEFVSGDKYHDDADNIYSMLGLLFHELEICGYVPE 502
SS+EIDG +HEF+SGD H ++ +Y L + +L+ GY PE
Sbjct: 609 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 649
BLAST of Sed0004444 vs. ExPASy TrEMBL
Match:
A0A6J1CN07 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012760 PE=4 SV=1)
HSP 1 Score: 871.3 bits (2250), Expect = 2.0e-249
Identity = 428/524 (81.68%), Postives = 464/524 (88.55%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFRPDSNPT------SPTKIIFPRSANSSNH----KFTANSIDPIVVW 60
M+SI A+TA + + NP +P I FPRS NSSN K T NSIDPIV+W
Sbjct: 1 MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60
Query: 61 TSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYA 120
TSSIAR+CRNGQLAEAAAE T MRLAGVEPNH+T ITL+SGCADFPS SLYFGSSLHGYA
Sbjct: 61 TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120
Query: 121 RKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFA 180
RK GLDT HVMVGT+++ MY+K QLGL R+VFDYL MKNSV+WNTMLDGY RNGE+E A
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180
Query: 181 LNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADL 240
++LFDEMPTRDAISWTALINGLLKQGYSEQALECFH MQCSG++PDYVS+IAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240
Query: 241 GTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSII 300
GTLTLGLWVNRFVMQQEFK NIR++NSLIDMYSRCGCIGFARQVFE+M RTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300
Query: 301 VGFAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRI 360
VG+A N +A+ESLEFFDAMQ+EGFKPD VSYTGALTACSHAGLVNKGLELFDNMKR+HRI
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMK 420
PRIEHYGCIVDLYGRAGRLE+AL VIEKMP+KPNEVVLGSLLAACRTHGDVSLAERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
HL KLDPGGDSNYVLLSNIYA+IGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
Query: 481 SGDKYHDDADNIYSMLGLLFHELEICGYVPEKD------ESSKD 509
+GDKYH DAD+IYSML LL HEL+ICG VPE + ESSKD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524
BLAST of Sed0004444 vs. ExPASy TrEMBL
Match:
A0A6J1FZR8 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449396 PE=4 SV=1)
HSP 1 Score: 855.5 bits (2209), Expect = 1.1e-244
Identity = 414/515 (80.39%), Postives = 460/515 (89.32%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFR-PDSNPTSPTKIIFPRSANSSNHKFTANSIDPIVVWTSSIARHCR 60
M+S+ AHTAIP +F+ + ++P+ + FPR NSS N I PIV+WTSSIAR+CR
Sbjct: 1 MSSVPAHTAIPFQFQLQQYSNSNPSNLNFPRYPNSS------NPIKPIVLWTSSIARYCR 60
Query: 61 NGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARKFGLDTGH 120
N QL EAAAE TRMRLAGVEPNHITFITL+SGCADFPS SL+FG+SLHGY RK GLDTGH
Sbjct: 61 NAQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHGYVRKLGLDTGH 120
Query: 121 VMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLFDEMPT 180
VMVGTALI MY+K QLGL R VFDYL MKNSVTWNTMLDGYMRNGE+E A+ LFDEMPT
Sbjct: 121 VMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIELAIELFDEMPT 180
Query: 181 RDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADLGTLTLGLWV 240
RDAISWTALING LKQGYSEQAL+CFH MQCSG+EPDYVS+IAVLAACADLG L+ GLWV
Sbjct: 181 RDAISWTALINGFLKQGYSEQALDCFHEMQCSGIEPDYVSIIAVLAACADLGALSFGLWV 240
Query: 241 NRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGFAVNSYA 300
NRF+MQQEFK NIR++NSLIDMYSRCGCI FARQVF+KMP RTLVSWNS+IVGFA N +A
Sbjct: 241 NRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMPKRTLVSWNSMIVGFATNGFA 300
Query: 301 EESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITPRIEHYGC 360
+ESLEFFDAMQ+EGFK DGVSYTGALTACSHAGLVNKGLELFDNMKR+HRITPRIEHYGC
Sbjct: 301 DESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVHRITPRIEHYGC 360
Query: 361 IVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHLFKLDPGG 420
IVDLY RAGRL+EAL+VIE MP+KPNEVVLGSLLAACRTHGDVSLAERL+K+LF+LDPGG
Sbjct: 361 IVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERLIKYLFELDPGG 420
Query: 421 DSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGDKYHDDA 480
DS+YVLLSNIYA++G+WEGAN VRRTMKARGVQKKPGFSS+EIDGKVHEFV+GDKYH DA
Sbjct: 421 DSSYVLLSNIYAAVGRWEGANMVRRTMKARGVQKKPGFSSIEIDGKVHEFVAGDKYHADA 480
Query: 481 DNIYSMLGLLFHELEICGYVPEK------DESSKD 509
DNIYSML +LFHEL+ICGYVPE +ESSK+
Sbjct: 481 DNIYSMLEVLFHELKICGYVPETATFMNGNESSKE 509
BLAST of Sed0004444 vs. ExPASy TrEMBL
Match:
A0A6J1HU31 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466586 PE=4 SV=1)
HSP 1 Score: 849.7 bits (2194), Expect = 6.1e-243
Identity = 415/522 (79.50%), Postives = 460/522 (88.12%), Query Frame = 0
Query: 1 MNSISAHTAIPTRFRPD--SNPTS------PTKIIFPRSANSSNHKFTANSIDPIVVWTS 60
M+S+ +HT IP +F+ SNP S P+ + FPR+ NSS N I PIV+WTS
Sbjct: 1 MSSVPSHTGIPFQFQLQQYSNPPSPIPHSNPSNLSFPRTPNSS------NPIKPIVLWTS 60
Query: 61 SIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARK 120
SIAR+CRN QLAEAAAE TRMRLAGVEPNHITFITL+SGCADFPS SL+FG+SLHGY RK
Sbjct: 61 SIARYCRNAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHGYVRK 120
Query: 121 FGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALN 180
GLDTGHVMVGTALI MY+K QLGL R VFDYL MKNSVTWNTMLDGYMRNGE+E A+
Sbjct: 121 LGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLAMKNSVTWNTMLDGYMRNGEIELAIE 180
Query: 181 LFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADLGT 240
LFDEMPTRDAISWTALING LKQGYSEQALECFH MQCSG+EPDYVS+IAVLAACADLG
Sbjct: 181 LFDEMPTRDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACADLGA 240
Query: 241 LTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVG 300
L+ GLWVNRF+MQQEFK NIR++NSLIDMYSRCGCI FARQVF+KM TLVSWNS+IVG
Sbjct: 241 LSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMSKHTLVSWNSMIVG 300
Query: 301 FAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITP 360
FA+N +A+ESLEFFDAMQ+EGF DGVSYTGALTACSHAGLVNKGLELFDNMKR+HRITP
Sbjct: 301 FAINGFADESLEFFDAMQKEGFMADGVSYTGALTACSHAGLVNKGLELFDNMKRVHRITP 360
Query: 361 RIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHL 420
RIEHYGCIVDLY RAGRL+EAL+VIE MP+KPNEVVLGSLLAACRTHGDVSLAERL+K+L
Sbjct: 361 RIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERLIKYL 420
Query: 421 FKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSG 480
F+LDPGGDS+YVLLSNIYA++G+WEGANKVRRTMKARGVQKKPGFSS+EIDGKVHEFV+G
Sbjct: 421 FELDPGGDSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHEFVAG 480
Query: 481 DKYHDDADNIYSMLGLLFHELEICGYVPEK------DESSKD 509
DKYH DADNIYSML +LFHEL+I GYVPE +ESSK+
Sbjct: 481 DKYHVDADNIYSMLEVLFHELKIYGYVPETATFMNGNESSKE 516
BLAST of Sed0004444 vs. ExPASy TrEMBL
Match:
A0A0A0LYD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1)
HSP 1 Score: 835.9 bits (2158), Expect = 9.2e-239
Identity = 413/524 (78.82%), Postives = 457/524 (87.21%), Query Frame = 0
Query: 1 MNSISAHTAIPTR-----FRPDSNPTS-PTKIIFPRSANSSNH----KFTANSIDPIVVW 60
M+SI +HTA P++ F P S P S PTK+ FPRS NS + KF NS+DPIV+W
Sbjct: 1 MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
Query: 61 TSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYA 120
TSS+AR+CRNGQL+EAAAE TRMRLAGVEPNHITFITL+S CADFPS S +F SSLHGYA
Sbjct: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
Query: 121 RKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFA 180
K+GLDTGHVMVGTALI MYSK QLG RKVF LG+KNSV+WNTML+G+MRNGE+E A
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 181 LNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADL 240
+ LFDEMPTRDAISWTALINGLLK GYSEQALECFH MQ SGV DYVS+IAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 241 GTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSII 300
G LTLGLWV+RFVM QEFK NI+++NSLIDMYSRCGCI FARQVF KM RTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 301 VGFAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRI 360
VGFAVN +A+ESLEFF AMQ+EGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK +H+I
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMK 420
TPRIEHYGCIVDLYGRAGRLE+AL++IE+MP+KPNEVVLGSLLAACRTHGDV+LAERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
HLFKLDP GD+ YVLLSNIYA+IGKW+GAN VRRTMKARGVQKKPG+SSVEIDGKVHEFV
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
Query: 481 SGDKYHDDADNIYSMLGLLFHELEICGYVPEKD------ESSKD 509
+GD YH DADNIYSML LL HEL++CGYVP D ES+KD
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
BLAST of Sed0004444 vs. ExPASy TrEMBL
Match:
A0A5A7UJB6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G002000 PE=4 SV=1)
HSP 1 Score: 835.1 bits (2156), Expect = 1.6e-238
Identity = 415/522 (79.50%), Postives = 458/522 (87.74%), Query Frame = 0
Query: 1 MNSISAHTAIPTRF-RPDSNP---TSPTKIIFPRSANSSN----HKFTANSIDPIVVWTS 60
M+SI +H A P++ +P S+ ++PTK+ FPRS S + KFTANS+ PIV WTS
Sbjct: 1 MSSIPSHIASPSQLQQPPSSSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQWTS 60
Query: 61 SIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARK 120
SIAR+C NGQL EAAAE TRMRLAGVEPNHITFITL+SGCADFPS S +F SSLHGYA K
Sbjct: 61 SIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSES-FFASSLHGYACK 120
Query: 121 FGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALN 180
FGLDTGHVMVGTALI MYSK QLGL +KVFDYLG+KNSV+WNTML+G+MRNGE+E A+
Sbjct: 121 FGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELAIQ 180
Query: 181 LFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSGVEPDYVSVIAVLAACADLGT 240
LFDEMPTRDAISWTALINGLLK GYSEQALECFH MQ SGV DYVS+IAVLAACADLG
Sbjct: 181 LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADLGA 240
Query: 241 LTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVG 300
LT GLWVNRFVMQQEFK N+R++NSLIDMYSRCGCI FARQVF KM RTLVSWNSIIVG
Sbjct: 241 LTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVG 300
Query: 301 FAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITP 360
FA N +A+ESLEFF AMQ+EGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKR+H+ITP
Sbjct: 301 FAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKITP 360
Query: 361 RIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHL 420
IEHYGCIVDLYGRAGRLE+A +VIE+MP+KPNEVVLGSLLAACRTHGDV LAERLMKH+
Sbjct: 361 GIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMKHI 420
Query: 421 FKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSG 480
FKLD GDSNYVLLSNIYA+IGKWEGANKVRRTMKARGVQKK G+SSVEIDGKVHEFV+G
Sbjct: 421 FKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFVAG 480
Query: 481 DKYHDDADNIYSMLGLLFHELEICGYVPEKD------ESSKD 509
DKYH DADNIYSML LLFHEL++CGYVP+ D +S+KD
Sbjct: 481 DKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521
BLAST of Sed0004444 vs. TAIR 10
Match:
AT1G05750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 589.7 bits (1519), Expect = 2.2e-168
Identity = 288/482 (59.75%), Postives = 357/482 (74.07%), Query Frame = 0
Query: 21 TSPTKIIFPRSANSSNHKFTANSIDPIVVWTSSIARHCRNGQLAEAAAELTRMRLAGVEP 80
TSP I AN + ++ + V WTS I RNG+LAEAA E + M LAGVEP
Sbjct: 10 TSPALITHKNHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEP 69
Query: 81 NHITFITLISGCADFPSRSLYFGSSLHGYARKFGLDTGHVMVGTALIGMYSKFGQLGLGR 140
NHITFI L+SGC DF S S G LHGYA K GLD HVMVGTA+IGMYSK G+ R
Sbjct: 70 NHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKAR 129
Query: 141 KVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLFDEMPTRDAISWTALINGLLKQGYSEQ 200
VFDY+ KNSVTWNTM+DGYMR+G+V+ A +FD+MP RD ISWTA+ING +K+GY E+
Sbjct: 130 LVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEE 189
Query: 201 ALECFHLMQCSGVEPDYVSVIAVLAACADLGTLTLGLWVNRFVMQQEFKGNIRVNNSLID 260
AL F MQ SGV+PDYV++IA L AC +LG L+ GLWV+R+V+ Q+FK N+RV+NSLID
Sbjct: 190 ALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLID 249
Query: 261 MYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGFAVNSYAEESLEFFDAMQREGFKPDGVS 320
+Y RCGC+ FARQVF M RT+VSWNS+IVGFA N A ESL +F MQ +GFKPD V+
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 321 YTGALTACSHAGLVNKGLELFDNMKRMHRITPRIEHYGCIVDLYGRAGRLEEALSVIEKM 380
+TGALTACSH GLV +GL F MK +RI+PRIEHYGC+VDLY RAGRLE+AL +++ M
Sbjct: 310 FTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Query: 381 PLKPNEVVLGSLLAACRTHG-DVSLAERLMKHLFKLDPGGDSNYVLLSNIYASIGKWEGA 440
P+KPNEVV+GSLLAAC HG ++ LAERLMKHL L+ SNYV+LSN+YA+ GKWEGA
Sbjct: 370 PMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGA 429
Query: 441 NKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGDKYHDDADNIYSMLGLLFHELEICGYV 500
+K+RR MK G++K+PGFSS+EID +H F++GD H + I +L L+ +L + G V
Sbjct: 430 SKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489
Query: 501 PE 502
E
Sbjct: 490 VE 491
BLAST of Sed0004444 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 369.0 bits (946), Expect = 6.1e-102
Identity = 181/448 (40.40%), Postives = 276/448 (61.61%), Query Frame = 0
Query: 55 ARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARKFG 114
+ + R G EA M +GV P+ I+ ++ IS C+ R++ +G S HGY + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369
Query: 115 LDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLF 174
++ + ALI MY K + ++FD + K VTWN+++ GY+ NGEV+ A F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429
Query: 175 DEMPTRDAISWTALINGLLKQGYSEQALECFHLMQC-SGVEPDYVSVIAVLAACADLGTL 234
+ MP ++ +SW +I+GL++ E+A+E F MQ GV D V+++++ +AC LG L
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489
Query: 235 TLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGF 294
L W+ ++ + + ++R+ +L+DM+SRCG A +F + NR + +W + I
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549
Query: 295 AVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITPR 354
A+ AE ++E FD M +G KPDGV++ GALTACSH GLV +G E+F +M ++H ++P
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609
Query: 355 IEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHLF 414
HYGC+VDL GRAG LEEA+ +IE MP++PN+V+ SLLAACR G+V +A + +
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669
Query: 415 KLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGD 474
L P +YVLLSN+YAS G+W KVR +MK +G++K PG SS++I GK HEF SGD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729
Query: 475 KYHDDADNIYSMLGLLFHELEICGYVPE 502
+ H + NI +ML + G+VP+
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHVPD 754
BLAST of Sed0004444 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 369.0 bits (946), Expect = 6.1e-102
Identity = 181/448 (40.40%), Postives = 276/448 (61.61%), Query Frame = 0
Query: 55 ARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLYFGSSLHGYARKFG 114
+ + R G EA M +GV P+ I+ ++ IS C+ R++ +G S HGY + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369
Query: 115 LDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGYMRNGEVEFALNLF 174
++ + ALI MY K + ++FD + K VTWN+++ GY+ NGEV+ A F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429
Query: 175 DEMPTRDAISWTALINGLLKQGYSEQALECFHLMQC-SGVEPDYVSVIAVLAACADLGTL 234
+ MP ++ +SW +I+GL++ E+A+E F MQ GV D V+++++ +AC LG L
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489
Query: 235 TLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPNRTLVSWNSIIVGF 294
L W+ ++ + + ++R+ +L+DM+SRCG A +F + NR + +W + I
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549
Query: 295 AVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRMHRITPR 354
A+ AE ++E FD M +G KPDGV++ GALTACSH GLV +G E+F +M ++H ++P
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609
Query: 355 IEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTHGDVSLAERLMKHLF 414
HYGC+VDL GRAG LEEA+ +IE MP++PN+V+ SLLAACR G+V +A + +
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669
Query: 415 KLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFVSGD 474
L P +YVLLSN+YAS G+W KVR +MK +G++K PG SS++I GK HEF SGD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729
Query: 475 KYHDDADNIYSMLGLLFHELEICGYVPE 502
+ H + NI +ML + G+VP+
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHVPD 754
BLAST of Sed0004444 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 354.4 bits (908), Expect = 1.6e-97
Identity = 171/471 (36.31%), Postives = 285/471 (60.51%), Query Frame = 0
Query: 33 NSSNHKFTANSIDPIVVWTSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGC 92
N + + F S +V W + I R+CR G + EA M+ + V P+ + ++S C
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 93 ADFPSRSLYFGSSLHGY--ARKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKN 152
+ ++ + +++ + +DT H++ TAL+ MY+ G + + R+ F + ++N
Sbjct: 223 G--RTGNMRYNRAIYEFLIENDVRMDT-HLL--TALVTMYAGAGCMDMAREFFRKMSVRN 282
Query: 153 SVTWNTMLDGYMRNGEVEFALNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQC 212
M+ GY + G ++ A +FD+ +D + WT +I+ ++ Y ++AL F M C
Sbjct: 283 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 342
Query: 213 SGVEPDYVSVIAVLAACADLGTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGF 272
SG++PD VS+ +V++ACA+LG L WV+ + + + +NN+LI+MY++CG +
Sbjct: 343 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 402
Query: 273 ARQVFEKMPNRTLVSWNSIIVGFAVNSYAEESLEFFDAMQREGFKPDGVSYTGALTACSH 332
R VFEKMP R +VSW+S+I +++ A ++L F M++E +P+ V++ G L CSH
Sbjct: 403 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 462
Query: 333 AGLVNKGLELFDNMKRMHRITPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLG 392
+GLV +G ++F +M + ITP++EHYGC+VDL+GRA L EAL VIE MP+ N V+ G
Sbjct: 463 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 522
Query: 393 SLLAACRTHGDVSLAERLMKHLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARG 452
SL++ACR HG++ L + K + +L+P D VL+SNIYA +WE +RR M+ +
Sbjct: 523 SLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKN 582
Query: 453 VQKKPGFSSVEIDGKVHEFVSGDKYHDDADNIYSMLGLLFHELEICGYVPE 502
V K+ G S ++ +GK HEF+ GDK H ++ IY+ L + +L++ GYVP+
Sbjct: 583 VFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
BLAST of Sed0004444 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 349.7 bits (896), Expect = 3.8e-96
Identity = 176/469 (37.53%), Postives = 280/469 (59.70%), Query Frame = 0
Query: 43 SIDP-IVVWTSSIARHCRNGQLAEAAAELTRMRLAGVEPNHITFITLISGCADFPSRSLY 102
+IDP + ++T++I NG +A ++ + + PN TF +L+ C S
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC------STK 149
Query: 103 FGSSLHGYARKFGLDTGHVMVGTALIGMYSKFGQLGLGRKVFDYLGMKNSVTWNTMLDGY 162
G +H + KFGL V T L+ +Y+K G + +KVFD + ++ V+ M+ Y
Sbjct: 150 SGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 209
Query: 163 MRNGEVEFALNLFDEMPTRDAISWTALINGLLKQGYSEQALECFHLMQCSG-VEPDYVSV 222
+ G VE A LFD M RD +SW +I+G + G+ AL F + G +PD ++V
Sbjct: 210 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 269
Query: 223 IAVLAACADLGTLTLGLWVNRFVMQQEFKGNIRVNNSLIDMYSRCGCIGFARQVFEKMPN 282
+A L+AC+ +G L G W++ FV + N++V LIDMYS+CG + A VF P
Sbjct: 270 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 329
Query: 283 RTLVSWNSIIVGFAVNSYAEESLEFFDAMQR-EGFKPDGVSYTGALTACSHAGLVNKGLE 342
+ +V+WN++I G+A++ Y++++L F+ MQ G +P +++ G L AC+HAGLVN+G+
Sbjct: 330 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 389
Query: 343 LFDNMKRMHRITPRIEHYGCIVDLYGRAGRLEEALSVIEKMPLKPNEVVLGSLLAACRTH 402
+F++M + + I P+IEHYGC+V L GRAG+L+ A I+ M + + V+ S+L +C+ H
Sbjct: 390 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 449
Query: 403 GDVSLAERLMKHLFKLDPGGDSNYVLLSNIYASIGKWEGANKVRRTMKARGVQKKPGFSS 462
GD L + + ++L L+ YVLLSNIYAS+G +EG KVR MK +G+ K+PG S+
Sbjct: 450 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 509
Query: 463 VEIDGKVHEFVSGDKYHDDADNIYSMLGLLFHELEICGYVPEKDESSKD 509
+EI+ KVHEF +GD+ H + IY+ML + ++ GYVP + +D
Sbjct: 510 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQD 551
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038877228.1 | 8.2e-250 | 81.49 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa ... | [more] |
XP_022142716.1 | 4.1e-249 | 81.68 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica ... | [more] |
XP_023521260.1 | 1.6e-245 | 80.58 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita ... | [more] |
KAG7012718.1 | 6.1e-245 | 80.39 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022945035.1 | 2.3e-244 | 80.39 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9MA50 | 3.1e-167 | 59.75 | Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 8.6e-101 | 40.40 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
O23337 | 2.2e-96 | 36.31 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Q9SZT8 | 5.4e-95 | 37.53 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
O82380 | 7.0e-95 | 36.21 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CN07 | 2.0e-249 | 81.68 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordic... | [more] |
A0A6J1FZR8 | 1.1e-244 | 80.39 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbit... | [more] |
A0A6J1HU31 | 6.1e-243 | 79.50 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbit... | [more] |
A0A0A0LYD6 | 9.2e-239 | 78.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1 | [more] |
A0A5A7UJB6 | 1.6e-238 | 79.50 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G05750.1 | 2.2e-168 | 59.75 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 6.1e-102 | 40.40 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT3G22690.2 | 6.1e-102 | 40.40 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT4G14820.1 | 1.6e-97 | 36.31 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G37380.1 | 3.8e-96 | 37.53 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |