Sed0004440 (gene) Chayote v1

Overview


Name	Sed0004440
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ULP_PROTEASE domain-containing protein
Location	LG10: 34177153 .. 34177994 (-)
RNA-Seq Expression	Sed0004440
Synteny	Sed0004440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAGACGTCTCCATGCTAAAATAGCTAACACCACTTTCGCGAGAGTATATAATTTTTTCGACGCTGGATCCATCTCTATTTTTAGTGACTATGAGTCACGAGCAAAGATGCTGGCTACAAGACTTAAACAATTGGACTCTACTCAAGTTTTAATATTTCCGTACAATTCTGGGTACGTCTTATATGAATTCTTTATATGTCTCATTACATAACATAACTTGCATGTAATATTTCAATCTTGTATTAGGAATCATTGGACTTTAATACTTATTAACAATTCAAGTGGCACTGTATTTTGGATGGATCCACTGAAAAATCGACTTGACCAAGATATCATTAGCGTGATTGGAATGTACGTTAACTTTTTTATATTCTTAATATTATCATGAATAAGTTTATGTTTATTAATCTAGTATCATTTCTAAAATTGTAGATCGTTCAAGCAATTAAAAAAGAAGAAGCCTGTTTGGAAACCTATCAAGGTAACTTATTCAATAAGTATGTGTCATCAGCTATGAAATATTTTTACTATCTTATCAATGTTTTATGATGTTTTTTTTAAATTAGTGTCCAAAACAACCTGGGGTAGTGGAATGCGGCTACTACATCATGATGTACATGCGAGAGATTGTGTGCCAAAACACGAACTCAATAATTGATGTAGTAAGTATATATAAGTAGAGTTAGATATTAATTTAATAGTAATATACTAATATTTATATTTTCTTATCTTATTTTCAGATGAATAATGCACCATCTAGCTACACACAAGATGACATTGATAAAGTACGAACTGAATGGGCAGAGTTCGTGTTTACCTACCTACACATCGCGTAG

mRNA sequence

ATGTTAAAGACATCGTTCAAGCAATTAAAAAAGAAGAAGCCTGTTTGGAAACCTATCAAGTGTCCAAAACAACCTGGGGTAGTGGAATGCGGCTACTACATCATGATGTACATGCGAGAGATTGTGTGCCAAAACACGAACTCAATAATTGATGTAATGAATAATGCACCATCTAGCTACACACAAGATGACATTGATAAAGTACGAACTGAATGGGCAGAGTTCGTGTTTACCTACCTACACATCGCGTAG

Coding sequence (CDS)

ATGTTAAAGACATCGTTCAAGCAATTAAAAAAGAAGAAGCCTGTTTGGAAACCTATCAAGTGTCCAAAACAACCTGGGGTAGTGGAATGCGGCTACTACATCATGATGTACATGCGAGAGATTGTGTGCCAAAACACGAACTCAATAATTGATGTAATGAATAATGCACCATCTAGCTACACACAAGATGACATTGATAAAGTACGAACTGAATGGGCAGAGTTCGTGTTTACCTACCTACACATCGCGTAG

Protein sequence

MLKTSFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSYTQDDIDKVRTEWAEFVFTYLHIA

Homology

[Close]

BLAST of Sed0004440 vs. NCBI nr
Match: TYK04924.1 (hypothetical protein E5676_scaffold143G001330 [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 5   SFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSYTQDD 64
           SF  + KKKP W+ +KCPKQ GVVECGYY+M +MR+I+   + SII +M ++P +YTQDD
Sbjct: 222 SFNIMNKKKPNWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAYTQDD 281

Query: 65  IDKVRTEWAEFVFTYLHIA 84
           ID +R+EWAEFV  ++H A
Sbjct: 282 IDCIRSEWAEFVGKHVHCA 300

[Close]

BLAST of Sed0004440 vs. NCBI nr
Match: TYK18000.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19
Identity = 44/83 (53.01%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MLKTSFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSY 60
           +++ SF  + KKKP W+ +KCPKQ GVVECGYY+M +MR+I+   + SII +M ++P +Y
Sbjct: 401 VVERSFNIMNKKKPAWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAY 460

Query: 61  TQDDIDKVRTEWAEFVFTYLHIA 84
           TQD+ID +R+EWAEFV  ++H A
Sbjct: 461 TQDEIDCIRSEWAEFVGKHVHCA 483

[Close]

BLAST of Sed0004440 vs. NCBI nr
Match: KAA0051686.1 (transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19
Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1    MLKTSFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSY 60
            +++ SF  + KKKPVW+ +KCPKQ GVV CGYY+M +MR+I+   + SII +M ++P  Y
Sbjct: 998  VVERSFNIMNKKKPVWRVVKCPKQSGVVACGYYVMRFMRDIIMSTSTSIIQIMKDSPRVY 1057

Query: 61   TQDDIDKVRTEWAEFVFTYLHIA 84
            TQDDID +R+EWAEFV  ++H A
Sbjct: 1058 TQDDIDCIRSEWAEFVGKHVHCA 1080

[Close]

BLAST of Sed0004440 vs. NCBI nr
Match: KAA0067083.1 (uncharacterized protein E6C27_scaffold38G001360 [Cucumis melo var. makuwa] >TYK26318.1 uncharacterized protein E5676_scaffold14G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 3.8e-19
Identity = 45/83 (54.22%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MLKTSFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSY 60
           +++ SF  +KKKKP W+ +KCPKQ G VECGYY+M +MR+I+   + SIID+M ++P +Y
Sbjct: 441 VVERSFNIMKKKKPNWRIVKCPKQSGKVECGYYVMRFMRDIILSMSTSIIDIMKDSPRTY 500

Query: 61  TQDDIDKVRTEWAEFVFTYLHIA 84
           TQDDID +R+EWAEFV  +++ A
Sbjct: 501 TQDDIDCIRSEWAEFVGKHVYCA 523

[Close]

BLAST of Sed0004440 vs. NCBI nr
Match: KAA0042507.1 (uncharacterized protein E6C27_scaffold5359G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 104.4 bits (259), Expect = 4.9e-19
Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 9  LKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSYTQDDIDKV 68
          + KKKP W+ +KCPKQ GVVECGYY+M +MR+I+   + SII +M ++P +YTQDDID +
Sbjct: 1  MNKKKPAWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAYTQDDIDCI 60

Query: 69 RTEWAEFVFTYLHIA 84
          R+EWAEFV  ++H A
Sbjct: 61 RSEWAEFVGKHVHCA 75

[Close]

BLAST of Sed0004440 vs. ExPASy TrEMBL
Match: A0A5D3C0Y2 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001330 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.2e-20
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 5   SFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSYTQDD 64
           SF  + KKKP W+ +KCPKQ GVVECGYY+M +MR+I+   + SII +M ++P +YTQDD
Sbjct: 222 SFNIMNKKKPNWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAYTQDD 281

Query: 65  IDKVRTEWAEFVFTYLHIA 84
           ID +R+EWAEFV  ++H A
Sbjct: 282 IDCIRSEWAEFVGKHVHCA 300

[Close]

BLAST of Sed0004440 vs. ExPASy TrEMBL
Match: A0A5D3D2T0 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003090 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.2e-20
Identity = 44/83 (53.01%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MLKTSFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSY 60
           +++ SF  + KKKP W+ +KCPKQ GVVECGYY+M +MR+I+   + SII +M ++P +Y
Sbjct: 401 VVERSFNIMNKKKPAWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAY 460

Query: 61  TQDDIDKVRTEWAEFVFTYLHIA 84
           TQD+ID +R+EWAEFV  ++H A
Sbjct: 461 TQDEIDCIRSEWAEFVGKHVHCA 483

[Close]

BLAST of Sed0004440 vs. ExPASy TrEMBL
Match: A0A5A7UBV8 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00650 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19
Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1    MLKTSFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSY 60
            +++ SF  + KKKPVW+ +KCPKQ GVV CGYY+M +MR+I+   + SII +M ++P  Y
Sbjct: 998  VVERSFNIMNKKKPVWRVVKCPKQSGVVACGYYVMRFMRDIIMSTSTSIIQIMKDSPRVY 1057

Query: 61   TQDDIDKVRTEWAEFVFTYLHIA 84
            TQDDID +R+EWAEFV  ++H A
Sbjct: 1058 TQDDIDCIRSEWAEFVGKHVHCA 1080

[Close]

BLAST of Sed0004440 vs. ExPASy TrEMBL
Match: A0A5D3DS26 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00990 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 45/83 (54.22%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MLKTSFKQLKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSY 60
           +++ SF  +KKKKP W+ +KCPKQ G VECGYY+M +MR+I+   + SIID+M ++P +Y
Sbjct: 441 VVERSFNIMKKKKPNWRIVKCPKQSGKVECGYYVMRFMRDIILSMSTSIIDIMKDSPRTY 500

Query: 61  TQDDIDKVRTEWAEFVFTYLHIA 84
           TQDDID +R+EWAEFV  +++ A
Sbjct: 501 TQDDIDCIRSEWAEFVGKHVYCA 523

[Close]

BLAST of Sed0004440 vs. ExPASy TrEMBL
Match: A0A5A7TLC3 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold5359G00010 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-19
Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 9  LKKKKPVWKPIKCPKQPGVVECGYYIMMYMREIVCQNTNSIIDVMNNAPSSYTQDDIDKV 68
          + KKKP W+ +KCPKQ GVVECGYY+M +MR+I+   + SII +M ++P +YTQDDID +
Sbjct: 1  MNKKKPAWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAYTQDDIDCI 60

Query: 69 RTEWAEFVFTYLHIA 84
          R+EWAEFV  ++H A
Sbjct: 61 RSEWAEFVGKHVHCA 75

The following BLAST results are available for this feature:

BLAST of Sed0004440 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04924.1	1.7e-19	56.96	hypothetical protein E5676_scaffold143G001330 [Cucumis melo var. makuwa]	[more]
TYK18000.1	1.7e-19	53.01	transposase [Cucumis melo var. makuwa]	[more]
KAA0051686.1	2.2e-19	54.22	transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]	[more]
KAA0067083.1	3.8e-19	54.22	uncharacterized protein E6C27_scaffold38G001360 [Cucumis melo var. makuwa] >TYK2...	[more]
KAA0042507.1	4.9e-19	57.33	uncharacterized protein E6C27_scaffold5359G00010 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0004440 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0004440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0Y2	8.2e-20	56.96	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3D2T0	8.2e-20	53.01	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003090 P...	[more]
A0A5A7UBV8	1.1e-19	54.22	Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuw...	[more]
A0A5D3DS26	1.8e-19	54.22	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TLC3	2.4e-19	57.33	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Sed0004440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 1..74 e-value: 6.0E-6 score: 26.2
None	No IPR available	GENE3D	3.40.395.10	Adenoviral Proteinase; Chain A	coord: 1..78 e-value: 5.2E-8 score: 34.5
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 7..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004440.1	Sed0004440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity