Sed0004426 (gene) Chayote v1

Overview


Name	Sed0004426
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MFP1 attachment factor 1-like
Location	LG01: 21598292 .. 21599726 (-)
RNA-Seq Expression	Sed0004426
Synteny	Sed0004426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGAATCTGATATCGCCGCCGCGCCGTCCGCCATACCGGCACCGGACTCTCAAGGAGATCAGCTCCAGGATTCAACCCAATCATCGAAATCGTTCAACGCCTCGTTCAGTATCTGGCCGCCGTCGCAACGCACTCGCGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTACGGCACTGTTCCTCACGAGGAGGCCGCCGATGCAGCTCGGCTTATCGAGGAGGAAGCTTATTCCATCGCCGGAGCTAAAGCCAGCGCCGACGACGACGGGATCGAGATCCTTCAGCTGTACTCTAAGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCGGCGTCGGCTGATTCTACAGCCGAAAACGGTTCGTCTCCTCCTGTTGAATCGACTATCCCTGTCGAGGAAACCCCATCTGCTGTTGAAAACTGAGTCTAGGGTTTTTTCCTCTTAGATTGTGAATTAGGTTTTCTGGATGGTTAATGAGGGTTTCTTCTACCGAGATCTGTTTGTATGGCTTGTGATTTTCCGATGCTTACATGAGAATCATTTGTCTTAGGTGCCCCTCCCCCATATTTTGGACTCGTTTTGTTCTCTTCTATCTATTTTATGTTATTTACTATCTATAATCGTGGTTTCCTGACACAAGATTATGCAAAGATTCTTGTTTCAGGCATGTCTTGGACCTGAATGTGGCTATCTCTTTATCCTTGTCTACTGTGATCTCTAATTTTCTCTAATATGATGTTTGTTTGTTTATCCAGCTTTAATTGTATTGTAGGCAACTAGGGATGGGTATTTAATTAGTACATTGGTATAACTGTGAGACTGTAAAAAAATTGAGAGATCGAAGTGGCTTATAGCTTAGGTGGTGTTGGATAATACAGATGCATGCAATCAAGAGTTCCATTTGTGTTATATTTAAAATGTGTACATTGATGTGTGAACCTTGTAGTTGATTGCAGGAGAATGCTAGTTCCCTGGTCTTTGAGCGTTATGGGTTTTGAGTATTGAAGCACCTTCTAACTCTACCTCAAACCCTGGTTGAAAAATACATCTCTGTGAAGGCACGCTTTGAATTTTATGCTTCACAATCCGAGATGGTGGGCTTTGTCGTGTTGGTAATCTTTATATCCAGTGTTTTAAATGGCGCGTCTAAGCGCTCTTGGGCTCAAATCCCACCTTTTGCGCCTTGCATGTCCCAGGCGAGGCACGTGTAATAAGGCGCGAGCCTTATGACACCTTACATGAAGCCCCGGGCGCCTAAAGGTGCGTGCCTCATGGGCTTTTTAATTTTCCTTTGTGTTTTTTGTATTTTAGATCCCCATACTAGATTATTTGAAGTGCGTGTAGGTTGATAGTTGAATATTATGCATGATTTATATATTATTCTTGGTTAAAA

mRNA sequence

ATGTCCGAATCTGATATCGCCGCCGCGCCGTCCGCCATACCGGCACCGGACTCTCAAGGAGATCAGCTCCAGGATTCAACCCAATCATCGAAATCGTTCAACGCCTCGTTCAGTATCTGGCCGCCGTCGCAACGCACTCGCGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTACGGCACTGTTCCTCACGAGGAGGCCGCCGATGCAGCTCGGCTTATCGAGGAGGAAGCTTATTCCATCGCCGGAGCTAAAGCCAGCGCCGACGACGACGGGATCGAGATCCTTCAGCTGTACTCTAAGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCGGCGTCGGCTGATTCTACAGCCGAAAACGGAGAATGCTAGTTCCCTGGTCTTTGAGCGTTATGGGTTTTGAGTATTGAAGCACCTTCTAACTCTACCTCAAACCCTGGTTGAAAAATACATCTCTGTGAAGGCACGCTTTGAATTTTATGCTTCACAATCCGAGATGGTGGGCTTTGTCGTGTTGGTAATCTTTATATCCAGTGTTTTAAATGGCGCGTCTAAGCGCTCTTGGGCTCAAATCCCACCTTTTGCGCCTTGCATGTCCCAGGCGAGGCACGTGTAATAAGGCGCGAGCCTTATGACACCTTACATGAAGCCCCGGGCGCCTAAAGGTGCGTGCCTCATGGGCTTTTTAATTTTCCTTTGTGTTTTTTGTATTTTAGATCCCCATACTAGATTATTTGAAGTGCGTGTAGGTTGATAGTTGAATATTATGCATGATTTATATATTATTCTTGGTTAAAA

Coding sequence (CDS)

ATGTCCGAATCTGATATCGCCGCCGCGCCGTCCGCCATACCGGCACCGGACTCTCAAGGAGATCAGCTCCAGGATTCAACCCAATCATCGAAATCGTTCAACGCCTCGTTCAGTATCTGGCCGCCGTCGCAACGCACTCGCGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTACGGCACTGTTCCTCACGAGGAGGCCGCCGATGCAGCTCGGCTTATCGAGGAGGAAGCTTATTCCATCGCCGGAGCTAAAGCCAGCGCCGACGACGACGGGATCGAGATCCTTCAGCTGTACTCTAAGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCGGCGTCGGCTGATTCTACAGCCGAAAACGGAGAATGCTAG

Protein sequence

MSESDIAAAPSAIPAPDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETVKARAASADSTAENGEC

Homology

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BLAST of Sed0004426 vs. NCBI nr
Match: XP_022937347.1 (MFP1 attachment factor 1-like [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46
Identity = 110/134 (82.09%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAPDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSN 60
           MSE++IA  P+     DS GDQ ++S +SSKSF+ SFSIWPPSQRTRDAVIKRLIETLSN
Sbjct: 1   MSETEIATVPTT--EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 60

Query: 61  PSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETV 120
           PSVLSKRYGTVPHEEA DAARLIEEEAYS A AKASADDDGIEILQLYS+EISKRTL+TV
Sbjct: 61  PSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 120

Query: 121 KARAASADSTAENG 135
           KARAAS DSTAENG
Sbjct: 121 KARAAS-DSTAENG 131

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BLAST of Sed0004426 vs. NCBI nr
Match: XP_023535662.1 (MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 2.0e-46
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAPDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSN 60
           MSE +IA  P+     DS GDQ ++S +SSKSF+ SFSIWPPSQRTRDAVIKRLIETLSN
Sbjct: 1   MSEPEIATVPTT--EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 60

Query: 61  PSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETV 120
           PSVLSKRYGTVPHEEA DAARLIEEEAYS A AKASADDDGIEILQLYS+EISKRTL+TV
Sbjct: 61  PSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 120

Query: 121 KARAASADSTAENG 135
           KARAAS DSTAENG
Sbjct: 121 KARAAS-DSTAENG 131

[Close]

BLAST of Sed0004426 vs. NCBI nr
Match: KAG6591406.1 (MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 2.0e-46
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAPDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSN 60
           MSE +IA  P+     DS GDQ ++S +SSKSF+ SFSIWPPSQRTRDAVIKRLIETLSN
Sbjct: 1   MSEPEIATVPTT--EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 60

Query: 61  PSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETV 120
           PSVLSKRYGTVPHEEA DAARLIEEEAYS A AKASADDDGIEILQLYS+EISKRTL+TV
Sbjct: 61  PSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 120

Query: 121 KARAASADSTAENG 135
           KARAAS DSTAENG
Sbjct: 121 KARAAS-DSTAENG 131

[Close]

BLAST of Sed0004426 vs. NCBI nr
Match: XP_022977133.1 (MFP1 attachment factor 1-like [Cucurbita maxima])

HSP 1 Score: 194.9 bits (494), Expect = 4.5e-46
Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAPDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSN 60
           MSE +IA  P+     DS GDQ ++S +SSKSF+ SFSIWPPSQRTRDAVIKRLIETLSN
Sbjct: 1   MSEPEIATVPTT--EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 60

Query: 61  PSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETV 120
           PSVLSKRYGTVPH+EA DAARLIEEEAYS A AKASADDDGIEILQLYS+EISKRTL+TV
Sbjct: 61  PSVLSKRYGTVPHDEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 120

Query: 121 KARAASADSTAENG 135
           KARAAS DSTAENG
Sbjct: 121 KARAAS-DSTAENG 131

[Close]

BLAST of Sed0004426 vs. NCBI nr
Match: XP_022143006.1 (MFP1 attachment factor 1-like [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 3.8e-45
Identity = 107/137 (78.10%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MSESDIAAAPSAIP---APDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIET 60
           MSE +IAA P++ P   A DS GDQ ++ T+S KSF+ASFSIWPPSQRTRDAV+KRLIET
Sbjct: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60

Query: 61  LSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTL 120
           LSNPSVLSKRYGTVP +EAA+AARLIEEEAYS A +KA+ADDDGIEILQLYS+EISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKARAASADSTAENG 135
           ETVKA+AA  DSTAENG
Sbjct: 121 ETVKAKAA-PDSTAENG 136

[Close]

BLAST of Sed0004426 vs. ExPASy Swiss-Prot
Match: Q9M7N6 (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30
Identity = 72/118 (61.02%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 18  SQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEAA 77
           +Q  +       +K    SFSIWPP+QRTRDAVI RLIE+LS PS+LSKRYGT+P +EA+
Sbjct: 7   AQSQETVTQETQNKPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEAS 66

Query: 78  DAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETVKARAASADSTAENGE 136
           + ARLIEEEA++ AG+ AS  DDGIEILQ+YSKEISKR ++TVK+R  SA + A  GE
Sbjct: 67  ETARLIEEEAFAAAGSTASDADDGIEILQVYSKEISKRMIDTVKSR--SAPAAASEGE 122

[Close]

BLAST of Sed0004426 vs. ExPASy Swiss-Prot
Match: Q9C500 (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.2e-26
Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 3   ESDIAAAPSAIPAPDSQ------GDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIE 62
           ES+ +   SA+  P SQ       D  +++    K    S  IWPP+Q+TRDAV+ RLIE
Sbjct: 18  ESESSTTISAMTDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIE 77

Query: 63  TLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRT 122
           TLS  S+LSKRYGT+  ++A   A+LIEEEAY +A    S+DDDGI+IL+LYSKEISKR 
Sbjct: 78  TLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRM 137

Query: 123 LETVKARA 125
           LE+VKAR+
Sbjct: 138 LESVKARS 145

[Close]

BLAST of Sed0004426 vs. ExPASy Swiss-Prot
Match: Q9FMH6 (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.6e-25
Identity = 67/140 (47.86%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAP--DSQGDQLQDSTQSSKSFN---ASFSIWPPSQRTRDAVIKRLI 60
           M+E++  +  ++ P P  +++      +T++ K+ N    S  IWPP+Q+TRDAVI RLI
Sbjct: 1   MAETETESITTSSPPPISETENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLI 60

Query: 61  ETLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKR 120
           ETLS  S+LSKR+G++  EEA+  A+ IE+EAY+IA A    DDDGIEIL+ YSKEISKR
Sbjct: 61  ETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKR 120

Query: 121 TLETVKARAASADSTAENGE 136
            LE+VKA++  A    ++G+
Sbjct: 121 MLESVKAKSNVASPPPKDGD 140

[Close]

BLAST of Sed0004426 vs. ExPASy Swiss-Prot
Match: Q0WQ91 (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 19  QGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEAAD 78
           + D   + T+  KS    FS+WPP Q++RD V+  +I+TLS  S+LS +YGT+  EEA+ 
Sbjct: 33  RSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASA 92

Query: 79  AARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETVKAR 124
            A+ IEE+AY IA    S+  DGI+ L++Y  E S+R +E+ + R
Sbjct: 93  VAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIESAEVR 135

[Close]

BLAST of Sed0004426 vs. ExPASy Swiss-Prot
Match: Q9M651 (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 7.8e-09
Identity = 36/104 (34.62%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 36  SFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGA-- 95
           S  +WPPS  TR A+I+R+    S+ ++ +++YG++  ++A + A+ IE+ A+S A    
Sbjct: 13  SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQF 72

Query: 96  KASADDDGIEILQLYSKEISKRTLETVK----ARAASADSTAEN 134
           +   D DG   +QLY+KE SK  LE +K    A+ A+ +  +E+
Sbjct: 73  EREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISED 116

[Close]

BLAST of Sed0004426 vs. ExPASy TrEMBL
Match: A0A6J1FAY3 (MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.8e-47
Identity = 110/134 (82.09%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAPDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSN 60
           MSE++IA  P+     DS GDQ ++S +SSKSF+ SFSIWPPSQRTRDAVIKRLIETLSN
Sbjct: 1   MSETEIATVPTT--EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 60

Query: 61  PSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETV 120
           PSVLSKRYGTVPHEEA DAARLIEEEAYS A AKASADDDGIEILQLYS+EISKRTL+TV
Sbjct: 61  PSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 120

Query: 121 KARAASADSTAENG 135
           KARAAS DSTAENG
Sbjct: 121 KARAAS-DSTAENG 131

[Close]

BLAST of Sed0004426 vs. ExPASy TrEMBL
Match: A0A6J1IP46 (MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.2e-46
Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAPDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSN 60
           MSE +IA  P+     DS GDQ ++S +SSKSF+ SFSIWPPSQRTRDAVIKRLIETLSN
Sbjct: 1   MSEPEIATVPTT--EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 60

Query: 61  PSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETV 120
           PSVLSKRYGTVPH+EA DAARLIEEEAYS A AKASADDDGIEILQLYS+EISKRTL+TV
Sbjct: 61  PSVLSKRYGTVPHDEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 120

Query: 121 KARAASADSTAENG 135
           KARAAS DSTAENG
Sbjct: 121 KARAAS-DSTAENG 131

[Close]

BLAST of Sed0004426 vs. ExPASy TrEMBL
Match: A0A6J1CNW8 (MFP1 attachment factor 1-like OS=Momordica charantia OX=3673 GN=LOC111012991 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.9e-45
Identity = 107/137 (78.10%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MSESDIAAAPSAIP---APDSQGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIET 60
           MSE +IAA P++ P   A DS GDQ ++ T+S KSF+ASFSIWPPSQRTRDAV+KRLIET
Sbjct: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60

Query: 61  LSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTL 120
           LSNPSVLSKRYGTVP +EAA+AARLIEEEAYS A +KA+ADDDGIEILQLYS+EISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKARAASADSTAENG 135
           ETVKA+AA  DSTAENG
Sbjct: 121 ETVKAKAA-PDSTAENG 136

[Close]

BLAST of Sed0004426 vs. ExPASy TrEMBL
Match: A0A0A0L505 (MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.2e-45
Identity = 112/140 (80.00%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MSESDIAAA-----PSAIPAPDSQ-GDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRL 60
           MS+  IAA       S  P  DSQ GDQ ++ST+S KSFN SFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISK 120
           IETLSNPSVLSKRYGTVP EEAA+AARLIEEEAYS A  KASADDDGIEILQLYS+EISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASADSTAENG 135
           RTLETVKARAAS DSTAENG
Sbjct: 121 RTLETVKARAAS-DSTAENG 139

[Close]

BLAST of Sed0004426 vs. ExPASy TrEMBL
Match: A0A5A7V8G3 (MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002960 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.1e-45
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MSESDIAAA-----PSAIPAPDSQ-GDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRL 60
           MS+  IAA       S  P  DSQ GDQ ++ST+S KSFN SFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISK 120
           IETLSNPSVLSKRYGTVP EEAA+AARLIEEEAYS A  KASADDDGIEILQLYS+EISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASADSTAENG 135
           RTLETVKARAAS DSTAENG
Sbjct: 121 RTLETVKARAAS-DSTAENG 139

[Close]

BLAST of Sed0004426 vs. TAIR 10
Match: AT1G47200.1 (WPP domain protein 2 )

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-27
Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 3   ESDIAAAPSAIPAPDSQ------GDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIE 62
           ES+ +   SA+  P SQ       D  +++    K    S  IWPP+Q+TRDAV+ RLIE
Sbjct: 18  ESESSTTISAMTDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIE 77

Query: 63  TLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRT 122
           TLS  S+LSKRYGT+  ++A   A+LIEEEAY +A    S+DDDGI+IL+LYSKEISKR 
Sbjct: 78  TLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRM 137

Query: 123 LETVKARA 125
           LE+VKAR+
Sbjct: 138 LESVKARS 145

[Close]

BLAST of Sed0004426 vs. TAIR 10
Match: AT5G43070.1 (WPP domain protein 1 )

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 67/140 (47.86%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 1   MSESDIAAAPSAIPAP--DSQGDQLQDSTQSSKSFN---ASFSIWPPSQRTRDAVIKRLI 60
           M+E++  +  ++ P P  +++      +T++ K+ N    S  IWPP+Q+TRDAVI RLI
Sbjct: 1   MAETETESITTSSPPPISETENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLI 60

Query: 61  ETLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKR 120
           ETLS  S+LSKR+G++  EEA+  A+ IE+EAY+IA A    DDDGIEIL+ YSKEISKR
Sbjct: 61  ETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKR 120

Query: 121 TLETVKARAASADSTAENGE 136
            LE+VKA++  A    ++G+
Sbjct: 121 MLESVKAKSNVASPPPKDGD 140

[Close]

BLAST of Sed0004426 vs. TAIR 10
Match: AT5G27940.1 (WPP domain protein 3 )

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16
Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 19  QGDQLQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEAAD 78
           + D   + T+  KS    FS+WPP Q++RD V+  +I+TLS  S+LS +YGT+  EEA+ 
Sbjct: 33  RSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASA 92

Query: 79  AARLIEEEAYSIAGAKASADDDGIEILQLYSKEISKRTLETVKAR 124
            A+ IEE+AY IA    S+  DGI+ L++Y  E S+R +E+ + R
Sbjct: 93  VAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIESAEVR 135

[Close]

BLAST of Sed0004426 vs. TAIR 10
Match: AT5G19320.1 (RAN GTPase activating protein 2 )

HSP 1 Score: 61.6 bits (148), Expect = 5.6e-10
Identity = 36/104 (34.62%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 36  SFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEAADAARLIEEEAYSIAGA-- 95
           S  +WPPS  TR A+I+R+    S+ ++ +++YG++  ++A + A+ IE+ A+S A    
Sbjct: 13  SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQF 72

Query: 96  KASADDDGIEILQLYSKEISKRTLETVK----ARAASADSTAEN 134
           +   D DG   +QLY+KE SK  LE +K    A+ A+ +  +E+
Sbjct: 73  EREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISED 116

[Close]

BLAST of Sed0004426 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09
Identity = 35/112 (31.25%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 23  LQDSTQSSKSFNASFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEAADAARL 82
           +  S +++++   S  +WPPS+ TR  +++R+ + ++ PS+ S++YG +  EEA   A+ 
Sbjct: 1   MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60

Query: 83  IEEEAYSIAGA--KASADDDGIEILQLYSKEISKRTLETVKARAASADSTAE 133
           IE+ A++ A    +   D DG   + +Y+KE SK  L+ +K R    +S  E
Sbjct: 61  IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIK-RGPQEESEVE 111

The following BLAST results are available for this feature:

BLAST of Sed0004426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937347.1	1.2e-46	82.09	MFP1 attachment factor 1-like [Cucurbita moschata]	[more]
XP_023535662.1	2.0e-46	82.09	MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6591406.1	2.0e-46	82.09	MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022977133.1	4.5e-46	81.34	MFP1 attachment factor 1-like [Cucurbita maxima]	[more]
XP_022143006.1	3.8e-45	78.10	MFP1 attachment factor 1-like [Momordica charantia]	[more]

BLAST of Sed0004426 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N6	1.2e-30	61.02	MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1	[more]
Q9C500	3.2e-26	53.13	WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=...	[more]
Q9FMH6	4.6e-25	47.86	WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=...	[more]
Q0WQ91	1.9e-15	42.86	WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=...	[more]
Q9M651	7.8e-09	34.62	RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 ...	[more]

BLAST of Sed0004426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAY3	5.8e-47	82.09	MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4...	[more]
A0A6J1IP46	2.2e-46	81.34	MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 S...	[more]
A0A6J1CNW8	1.9e-45	78.10	MFP1 attachment factor 1-like OS=Momordica charantia OX=3673 GN=LOC111012991 PE=...	[more]
A0A0A0L505	3.2e-45	80.00	MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1	[more]
A0A5A7V8G3	4.1e-45	79.29	MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Sed0004426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47200.1	2.2e-27	53.13	WPP domain protein 2	[more]
AT5G43070.1	3.2e-26	47.86	WPP domain protein 1	[more]
AT5G27940.1	1.4e-16	42.86	WPP domain protein 3	[more]
AT5G19320.1	5.6e-10	34.62	RAN GTPase activating protein 2	[more]
AT3G63130.1	2.1e-09	31.25	RAN GTPase activating protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038214	WPP domain superfamily	GENE3D	1.10.246.200	WPP domain	coord: 36..131 e-value: 2.2E-40 score: 139.0
IPR025265	WPP domain	PFAM	PF13943	WPP	coord: 36..128 e-value: 4.0E-39 score: 133.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..40
None	No IPR available	PANTHER	PTHR34362:SF1	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 10..133
IPR044692	WPP domain-containing protein 1/2/3	PANTHER	PTHR34362	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 10..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004426.1	Sed0004426.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048527	lateral root development
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005634	nucleus