Sed0004425 (gene) Chayote v1

Overview


Name	Sed0004425
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transducin/WD40 repeat-like superfamily protein
Location	LG06: 41800481 .. 41801922 (-)
RNA-Seq Expression	Sed0004425
Synteny	Sed0004425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCCTCTTTTTTTTGTTGTTACTCTGTTCTTCATTCTTCCCGCCGGCATGAAGTTCCGATCATGTCTACTCCCCTCCGCCGCCACCGCCGCCGATAAACCATATAATAAATCCCCTTCCTTCTTAATCTCCGACTCCAGCAACTTTTCCGACATGTCGGCCAACTCTTCCTCATCGACACCCAGTTCCGACACCAGCCATTCCAGTCTCCAATCCAATCTCTCCCTTCTATCCCTACCGTCCATTCCATCTCTCCAAAAACTCCCCACCGCCGCCGGCGACGATGTCCCAAACGTCGCCGTTTCCCAACTGCACGTCGCCGATTTCACCCTCCCGGTCTCCCATCTCGCCGTCCACGGCCCCCACCTCTTCATCGCCACCGCCCACAAAATCAACGTCTACGATCGCGCCACGCTCTCCCCCGCCGCCGCATTCACCGCTCCCGATTCCGGCTCCGTCAAGGGAATCGCCTTCCTCCACGGCCAAATCCTCACATCCCACCAAGACGGCAAAATCCGCATCTGGAATCTCAACTTCAAATTAGTCAACACTCTCCCTACAGTCAACGACCGCCTCCGCCGCCTCATCTTCCCCGGAAATTACGTCAGAATCCGTCGCCACAAGAAACTCCTCTGGATCCAACACGCCGACGCCGTGACCGGAATCGCCGTTCGCGGCGATTCCGTCTACTCCGTCTCTTGGGATCGGAGTTTGAAAATCTGGCGCGGCCCCGACCACCGCTGCGTGGAGTCGGTGAAGGCGGCGCACGACGACGCCGTCAACGCGGTGGCCGTCTCCGGCGATGGGACTGTGTACACCGGGTCGGCTGACCGGCGGATCCGGGTATGGGCGAAGCCGGCGGGGGAGAAGCGGCATGTTCTGGTGGCGAGTTTGGAGAAGCACAAATCGGCGGTGAATGCGTTGGCGTTGAACGGCGACGGGTCTCTGCTATTTTCCGGCGCCTGTGACCGGTCGGTGCTTGTTTGGGAAAGGGAGGACAGTGCTTGCCACGTGGCGGTGATCGGCGCGTTGAGGGGTCACGAAAATGCCATTCTGTGTTTGATGTACGTCGGGGATTTGTTGTTGAGTGGGTCCGCGGATCGGACGGTCAGGGTTTGGCGACGTGGCGGTGACGGTGGTTTTAACTGCTTGTCAGTACTGGCCGGTCATCGGAAACCGGTGAAATCGCTGGTGGTTGTTTCCGACGGGGACTCAAACGGCGTCGTTTCGGTGTGTAGTGGGAGTCTTGATGGGGAACTCAAAGCTTGGAAGCTCTCATTTTCAAATTGAAGTTTAATGGAATAATCATATCAAAAGAACAAATTTTGTACATTTTAATTTATTGTTTTAAAAAAATTTCAAGTCTGATTTTTTGCAGGTTTGAGAGTGGAATTGAATTTTTTTTTTTTTTTTGAAAAATGGAATTTGTGTTCAATAATC

mRNA sequence

TTTCTCCTCTTTTTTTTGTTGTTACTCTGTTCTTCATTCTTCCCGCCGGCATGAAGTTCCGATCATGTCTACTCCCCTCCGCCGCCACCGCCGCCGATAAACCATATAATAAATCCCCTTCCTTCTTAATCTCCGACTCCAGCAACTTTTCCGACATGTCGGCCAACTCTTCCTCATCGACACCCAGTTCCGACACCAGCCATTCCAGTCTCCAATCCAATCTCTCCCTTCTATCCCTACCGTCCATTCCATCTCTCCAAAAACTCCCCACCGCCGCCGGCGACGATGTCCCAAACGTCGCCGTTTCCCAACTGCACGTCGCCGATTTCACCCTCCCGGTCTCCCATCTCGCCGTCCACGGCCCCCACCTCTTCATCGCCACCGCCCACAAAATCAACGTCTACGATCGCGCCACGCTCTCCCCCGCCGCCGCATTCACCGCTCCCGATTCCGGCTCCGTCAAGGGAATCGCCTTCCTCCACGGCCAAATCCTCACATCCCACCAAGACGGCAAAATCCGCATCTGGAATCTCAACTTCAAATTAGTCAACACTCTCCCTACAGTCAACGACCGCCTCCGCCGCCTCATCTTCCCCGGAAATTACGTCAGAATCCGTCGCCACAAGAAACTCCTCTGGATCCAACACGCCGACGCCGTGACCGGAATCGCCGTTCGCGGCGATTCCGTCTACTCCGTCTCTTGGGATCGGAGTTTGAAAATCTGGCGCGGCCCCGACCACCGCTGCGTGGAGTCGGTGAAGGCGGCGCACGACGACGCCGTCAACGCGGTGGCCGTCTCCGGCGATGGGACTGTGTACACCGGGTCGGCTGACCGGCGGATCCGGGTATGGGCGAAGCCGGCGGGGGAGAAGCGGCATGTTCTGGTGGCGAGTTTGGAGAAGCACAAATCGGCGGTGAATGCGTTGGCGTTGAACGGCGACGGGTCTCTGCTATTTTCCGGCGCCTGTGACCGGTCGGTGCTTGTTTGGGAAAGGGAGGACAGTGCTTGCCACGTGGCGGTGATCGGCGCGTTGAGGGGTCACGAAAATGCCATTCTGTGTTTGATGTACGTCGGGGATTTGTTGTTGAGTGGGTCCGCGGATCGGACGGTCAGGGTTTGGCGACGTGGCGGTGACGGTGGTTTTAACTGCTTGTCAGTACTGGCCGGTCATCGGAAACCGGTGAAATCGCTGGTGGTTGTTTCCGACGGGGACTCAAACGGCGTCGTTTCGGTGTGTAGTGGGAGTCTTGATGGGGAACTCAAAGCTTGGAAGCTCTCATTTTCAAATTGAAGTTTAATGGAATAATCATATCAAAAGAACAAATTTTGTACATTTTAATTTATTGTTTTAAAAAAATTTCAAGTCTGATTTTTTGCAGGTTTGAGAGTGGAATTGAATTTTTTTTTTTTTTTTGAAAAATGGAATTTGTGTTCAATAATC

Coding sequence (CDS)

ATGAAGTTCCGATCATGTCTACTCCCCTCCGCCGCCACCGCCGCCGATAAACCATATAATAAATCCCCTTCCTTCTTAATCTCCGACTCCAGCAACTTTTCCGACATGTCGGCCAACTCTTCCTCATCGACACCCAGTTCCGACACCAGCCATTCCAGTCTCCAATCCAATCTCTCCCTTCTATCCCTACCGTCCATTCCATCTCTCCAAAAACTCCCCACCGCCGCCGGCGACGATGTCCCAAACGTCGCCGTTTCCCAACTGCACGTCGCCGATTTCACCCTCCCGGTCTCCCATCTCGCCGTCCACGGCCCCCACCTCTTCATCGCCACCGCCCACAAAATCAACGTCTACGATCGCGCCACGCTCTCCCCCGCCGCCGCATTCACCGCTCCCGATTCCGGCTCCGTCAAGGGAATCGCCTTCCTCCACGGCCAAATCCTCACATCCCACCAAGACGGCAAAATCCGCATCTGGAATCTCAACTTCAAATTAGTCAACACTCTCCCTACAGTCAACGACCGCCTCCGCCGCCTCATCTTCCCCGGAAATTACGTCAGAATCCGTCGCCACAAGAAACTCCTCTGGATCCAACACGCCGACGCCGTGACCGGAATCGCCGTTCGCGGCGATTCCGTCTACTCCGTCTCTTGGGATCGGAGTTTGAAAATCTGGCGCGGCCCCGACCACCGCTGCGTGGAGTCGGTGAAGGCGGCGCACGACGACGCCGTCAACGCGGTGGCCGTCTCCGGCGATGGGACTGTGTACACCGGGTCGGCTGACCGGCGGATCCGGGTATGGGCGAAGCCGGCGGGGGAGAAGCGGCATGTTCTGGTGGCGAGTTTGGAGAAGCACAAATCGGCGGTGAATGCGTTGGCGTTGAACGGCGACGGGTCTCTGCTATTTTCCGGCGCCTGTGACCGGTCGGTGCTTGTTTGGGAAAGGGAGGACAGTGCTTGCCACGTGGCGGTGATCGGCGCGTTGAGGGGTCACGAAAATGCCATTCTGTGTTTGATGTACGTCGGGGATTTGTTGTTGAGTGGGTCCGCGGATCGGACGGTCAGGGTTTGGCGACGTGGCGGTGACGGTGGTTTTAACTGCTTGTCAGTACTGGCCGGTCATCGGAAACCGGTGAAATCGCTGGTGGTTGTTTCCGACGGGGACTCAAACGGCGTCGTTTCGGTGTGTAGTGGGAGTCTTGATGGGGAACTCAAAGCTTGGAAGCTCTCATTTTCAAATTGA

Protein sequence

MKFRSCLLPSAATAADKPYNKSPSFLISDSSNFSDMSANSSSSTPSSDTSHSSLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIATAHKINVYDRATLSPAAAFTAPDSGSVKGIAFLHGQILTSHQDGKIRIWNLNFKLVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKIWRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEKHKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDLLLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGELKAWKLSFSN

Homology

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BLAST of Sed0004425 vs. NCBI nr
Match: XP_023525577.1 (protein JINGUBANG-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 617.5 bits (1591), Expect = 8.6e-173
Identity = 328/424 (77.36%), Postives = 361/424 (85.14%), Query Frame = 0


Query: 1   MKFRSCLLPSAATAADKPYNK--SPSFLISDSSNFSDMSANSSS---STPSSDTSHSSLQ 60
           MK RS LLP  +TAA    NK   PS+L SD S+ S+MSAN SS   STPSSDTS+SSLQ
Sbjct: 1   MKLRSWLLP-CSTAAKPSCNKPPEPSYLSSDGSSLSEMSANCSSSLTSTPSSDTSYSSLQ 60

Query: 61  SNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIATAHKI 120
           +NLSL SLPSIPSLQKLPT    D  NV+VSQ H+A F LP+SHLAVHG +L++ATAH+I
Sbjct: 61  TNLSLQSLPSIPSLQKLPTIT--DALNVSVSQHHLASFKLPISHLAVHGAYLYVATAHEI 120

Query: 121 NVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNLN-----FKLVNT 180
           NVYDR T S   AF A D  SGSVKGI+FL  +ILTSHQDGKIR+WNL+     FKLVNT
Sbjct: 121 NVYDRITFSHITAFNARDSSSGSVKGISFLRREILTSHQDGKIRVWNLSEKTKQFKLVNT 180

Query: 181 LPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKIWRGP 240
           LPTVNDRLRR I P NYV +RRHKK+LWIQHADAVTG+AV GDSVYSVSWDRSLKIW+G 
Sbjct: 181 LPTVNDRLRRFILPSNYVNVRRHKKVLWIQHADAVTGLAVNGDSVYSVSWDRSLKIWQGS 240

Query: 241 DHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEKHKSA 300
           +HRCVESVKAAH+DA+NAVAVS  GTVYTGSADR+IRVW KP  EKRHVLVA+LEKHKSA
Sbjct: 241 NHRCVESVKAAHEDAINAVAVSAGGTVYTGSADRKIRVWTKPETEKRHVLVATLEKHKSA 300

Query: 301 VNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDLLLSG 360
           VNALALN DGSLLFSGACDRSVLVWEREDSA H+AVIGALRGH NAILCLMYV DLLLSG
Sbjct: 301 VNALALNDDGSLLFSGACDRSVLVWEREDSANHMAVIGALRGHRNAILCLMYVSDLLLSG 360

Query: 361 SADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGELKAWK 413
           SADRTVRVW+RG DG FNCLSVL GH+KPVKSLVVVS+G+S+GVVSVCSGSLDGELK+WK
Sbjct: 361 SADRTVRVWQRGPDGSFNCLSVLEGHKKPVKSLVVVSEGESDGVVSVCSGSLDGELKSWK 420

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BLAST of Sed0004425 vs. NCBI nr
Match: KAA0034245.1 (F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa] >TYK15675.1 F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa])

HSP 1 Score: 613.6 bits (1581), Expect = 1.2e-171
Identity = 332/433 (76.67%), Postives = 366/433 (84.53%), Query Frame = 0


Query: 1   MKFRSCLLP---SAATAADKPYN----KSPSFLISDSSNFSDMSAN-SSSSTPSSDTSHS 60
           M+ RS LLP   +AAT+A +P N    +S SFLISD+S+FSD SAN SSSSTPSSDTS S
Sbjct: 1   MRVRSWLLPCSTAAATSAAEPNNIKSLQSSSFLISDASSFSDTSANSSSSSTPSSDTSCS 60

Query: 61  SLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIATA 120
           SLQSNLSL SLPSIPSLQKLP A+  D  +V +SQ  VA F LP+SHLAVHGP+L++ATA
Sbjct: 61  SLQSNLSLQSLPSIPSLQKLPIAS--DSFHVTLSQFPVASFKLPISHLAVHGPYLYVATA 120

Query: 121 HKINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNL------NFK 180
           H+INVYDR T S    F A D  SGSVKG AFL  +ILTSHQDGKIR+WNL       FK
Sbjct: 121 HEINVYDRLTFSHVTGFNARDSSSGSVKGFAFLRREILTSHQDGKIRVWNLLDKKNNQFK 180

Query: 181 LVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKI 240
           LVNTLPTVNDRLRR I P NYV +RRHKKLLWIQHADAVTG+AV  DS+YSVSWDRSLKI
Sbjct: 181 LVNTLPTVNDRLRRFILPKNYVNVRRHKKLLWIQHADAVTGLAVNNDSIYSVSWDRSLKI 240

Query: 241 WRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEK 300
           WRG DHRC+ESVKAAH+DA+NAVAVS  GTVYTGSADR+IRVWAKP  EKRHVLVA+LEK
Sbjct: 241 WRGSDHRCIESVKAAHEDAINAVAVSAGGTVYTGSADRKIRVWAKPEAEKRHVLVATLEK 300

Query: 301 HKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDL 360
           HKSAVNALALN DGSLLFSGACDRSVLVWEREDSA ++AVIGALRGH+NAILCL+YV DL
Sbjct: 301 HKSAVNALALNKDGSLLFSGACDRSVLVWEREDSANYMAVIGALRGHKNAILCLIYVSDL 360

Query: 361 LLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVV-SDGD---SNGVVSVCSGSL 414
           LLSGSADRTVRVWRRGGDG FNCL+VL GH+KPVKSLVVV S+G+   SNGVVSVCSGSL
Sbjct: 361 LLSGSADRTVRVWRRGGDGSFNCLTVLEGHKKPVKSLVVVSSEGEGMMSNGVVSVCSGSL 420

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BLAST of Sed0004425 vs. NCBI nr
Match: XP_022957580.1 (protein JINGUBANG-like [Cucurbita moschata])

HSP 1 Score: 610.1 bits (1572), Expect = 1.4e-170
Identity = 324/428 (75.70%), Postives = 358/428 (83.64%), Query Frame = 0


Query: 1   MKFRSCLLPSAATAADKPYNKSPS------FLISDSSNFSDMSANSSS---STPSSDTSH 60
           M  RS LLP  +TAA    NKSP       +L SD S+ S+MSAN SS   STPSSDTS+
Sbjct: 1   MSLRSWLLP-CSTAAKPSCNKSPEPSSSSFYLSSDGSSLSEMSANCSSSLTSTPSSDTSY 60

Query: 61  SSLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIAT 120
           SSLQ+NLSL SLPSIPSLQKLPT    D  NV+VSQ H+A F LP+SHLAVHG +L++AT
Sbjct: 61  SSLQTNLSLQSLPSIPSLQKLPTIT--DALNVSVSQHHLASFKLPISHLAVHGAYLYVAT 120

Query: 121 AHKINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNLN-----FK 180
           AH+INVYDR T S   AF A D  SGSVKGI+FL  +ILTSHQDGKIR+WNL+     FK
Sbjct: 121 AHEINVYDRITFSHVTAFNARDSSSGSVKGISFLRREILTSHQDGKIRVWNLSEKTKQFK 180

Query: 181 LVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKI 240
           LVNTLPTVNDRLRR I P NYV +RRHKK+LWIQHADAVTG+AV GDSVYSVSWDRSLK+
Sbjct: 181 LVNTLPTVNDRLRRFILPSNYVNVRRHKKVLWIQHADAVTGLAVNGDSVYSVSWDRSLKV 240

Query: 241 WRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEK 300
           W+G  HRCVESVKAAH+DA+N VAVS  GTVYTGSADR+IRVW KP  EKRHVLVA+LEK
Sbjct: 241 WQGSKHRCVESVKAAHEDAINTVAVSAGGTVYTGSADRKIRVWTKPETEKRHVLVATLEK 300

Query: 301 HKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDL 360
           HKSAVNALALN DGSLLFSGACDRSVLVWEREDSA H+AVIGALRGH NAILCL+YV DL
Sbjct: 301 HKSAVNALALNDDGSLLFSGACDRSVLVWEREDSANHMAVIGALRGHRNAILCLIYVWDL 360

Query: 361 LLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGEL 413
           LLSGSADRTVRVW+RG DG FNCLSVL GH+KPVKSLVVVS+G+S+GVVSVCSGSLDGEL
Sbjct: 361 LLSGSADRTVRVWQRGADGSFNCLSVLEGHKKPVKSLVVVSEGESDGVVSVCSGSLDGEL 420

[Close]

BLAST of Sed0004425 vs. NCBI nr
Match: KAG6601559.1 (Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 610.1 bits (1572), Expect = 1.4e-170
Identity = 324/428 (75.70%), Postives = 359/428 (83.88%), Query Frame = 0


Query: 1   MKFRSCLLPSAATAADKPYNKSP------SFLISDSSNFSDMSANSSS---STPSSDTSH 60
           M  RS LLP  +TAA    NK P      S+L SD S+ S+MSAN SS   STPSSDTS+
Sbjct: 1   MSLRSWLLP-CSTAAKPSCNKPPEPSSSSSYLSSDGSSLSEMSANCSSSLTSTPSSDTSY 60

Query: 61  SSLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIAT 120
           SSLQ+NLSL SLPSIPSLQKLPT    D  NV+VSQ H+A F LP+SHLAVHG +L++AT
Sbjct: 61  SSLQTNLSLQSLPSIPSLQKLPTIT--DALNVSVSQHHLASFKLPISHLAVHGAYLYVAT 120

Query: 121 AHKINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNLN-----FK 180
           AH+INVYDR T S   AF A D  SGSVKGI+FL  +ILTSHQDGKIR+WNL+     FK
Sbjct: 121 AHEINVYDRITFSHITAFNARDSSSGSVKGISFLRREILTSHQDGKIRVWNLSEKTKQFK 180

Query: 181 LVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKI 240
           LVNTLPTVNDRLRR I P NYV +RRHKK+LWIQHADAVTG+AV GDSVYSVSWDRSLK+
Sbjct: 181 LVNTLPTVNDRLRRFILPSNYVNVRRHKKVLWIQHADAVTGLAVNGDSVYSVSWDRSLKV 240

Query: 241 WRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEK 300
           W+G +HRCVESVKAAH+DA+NAVAVS  GTVYTGSADR+IRVW KP  EKRHVLVA+LEK
Sbjct: 241 WQGSNHRCVESVKAAHEDAINAVAVSAGGTVYTGSADRKIRVWTKPETEKRHVLVATLEK 300

Query: 301 HKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDL 360
           HKSAVNALALN DGSLLFSGACDRSVLVWEREDSA H+AVIGALRGH NAILCL+YV DL
Sbjct: 301 HKSAVNALALNDDGSLLFSGACDRSVLVWEREDSANHMAVIGALRGHRNAILCLIYVSDL 360

Query: 361 LLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGEL 413
           LLSGSADRTVRVW+RG DG FNCLSVL GH+KPVKSLVVVS+G+ +GVVSVCSGSLDGEL
Sbjct: 361 LLSGSADRTVRVWQRGADGSFNCLSVLEGHKKPVKSLVVVSEGELDGVVSVCSGSLDGEL 420

[Close]

BLAST of Sed0004425 vs. NCBI nr
Match: XP_038893246.1 (protein JINGUBANG-like [Benincasa hispida])

HSP 1 Score: 607.1 bits (1564), Expect = 1.2e-169
Identity = 327/430 (76.05%), Postives = 361/430 (83.95%), Query Frame = 0


Query: 1   MKFRSCLLP---SAATAADKPYNKSP---SFLISDSSNFSDMSAN-SSSSTPSSDTSHSS 60
           M+ RS LLP   +AA++A+   NK P   S+LISD+S+ SD SAN SSSSTPSSDTS SS
Sbjct: 1   MRVRSWLLPCSTAAASSAEPSNNKPPDSSSYLISDASSLSDTSANSSSSSTPSSDTSCSS 60

Query: 61  LQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIATAH 120
           LQSNLSL SLPSIPSLQKLPTA   D  NV +SQ  VA F LP+SHLAVHG +L++ATAH
Sbjct: 61  LQSNLSLQSLPSIPSLQKLPTAT--DSFNVTLSQFPVASFKLPISHLAVHGAYLYVATAH 120

Query: 121 KINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNL------NFKL 180
            INVYDR T S    F A D  SGSVKGIAFLH +ILTSHQDGKIR+WNL       FKL
Sbjct: 121 VINVYDRITFSHITTFNAQDSSSGSVKGIAFLHREILTSHQDGKIRVWNLPEKKNNQFKL 180

Query: 181 VNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKIW 240
           VNTLPTVNDRLRR I P NYV +RRHKK+LWIQHADAVTG+AV  DS+YSVSWDRSLKIW
Sbjct: 181 VNTLPTVNDRLRRFILPKNYVNVRRHKKVLWIQHADAVTGLAVNNDSIYSVSWDRSLKIW 240

Query: 241 RGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEKH 300
           RG +HRC+ESVKAAH+DAVNAVAVS  GTVYTGSADR+IRVW KP  EKRHVLVA+LEKH
Sbjct: 241 RGSNHRCIESVKAAHEDAVNAVAVSARGTVYTGSADRKIRVWEKPETEKRHVLVATLEKH 300

Query: 301 KSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDLL 360
           KSAVNALALN DGSLLFSGACDRSVLVWEREDSA ++AVIGALRGH+NAILCL+YV +LL
Sbjct: 301 KSAVNALALNDDGSLLFSGACDRSVLVWEREDSAKYMAVIGALRGHKNAILCLIYVSELL 360

Query: 361 LSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDS--NGVVSVCSGSLDGE 414
           LSGSADRTVRVWRRG DG +NCLSVL GH+KPVKSLVVVS+ +   NGVVSVCSGSLDGE
Sbjct: 361 LSGSADRTVRVWRRGADGSYNCLSVLEGHKKPVKSLVVVSEPEEMLNGVVSVCSGSLDGE 420

[Close]

BLAST of Sed0004425 vs. ExPASy Swiss-Prot
Match: O48716 (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.5e-58
Identity = 123/294 (41.84%), Postives = 182/294 (61.90%), Query Frame = 0


Query: 133 DSGSVKGIAFLHGQILTSHQDGKIRIWNLN------FKLVNTLPTVNDRLRRLIFPGNYV 192
           +SG VK I     +I T HQDGKIR+W ++       K   TLPT+ D  +  + P NYV
Sbjct: 133 NSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYV 192

Query: 193 RIRRHKKLLWIQHADAVTGIAVRGDS--VYSVSWDRSLKIWRGPDHRCVESVKAAHDDAV 252
            +++H+  LWI+HADAV+ +++  +   +YS SWDR++K+WR  D +C+ES+  AHDDAV
Sbjct: 193 EVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI-PAHDDAV 252

Query: 253 NAVAVSGDGTVYTGSADRRIRVWAKPAGEK--RHVLVASLEKHKSAVNALALNGDGSLLF 312
           N+V  + +  V++GSAD  ++ W +    K  +H L+ +L K +SAV ALA++ +G+ ++
Sbjct: 253 NSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVY 312

Query: 313 SGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDLLLSGSADRTVRVWRRGGD 372
            G+ D  V  WERE    +    G L+GH+ A+LCL   G L+ SGSAD+T+ VW+R G+
Sbjct: 313 FGSSDGLVNFWEREKQLNYG---GILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGN 372

Query: 373 GGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVS----VCSGSLDGELKAWKLSFS 413
               CLSVL GH  PVK L V +D +++        V SGSLD  +K W +S S
Sbjct: 373 -IHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVSES 421

[Close]

BLAST of Sed0004425 vs. ExPASy Swiss-Prot
Match: Q8YRI1 (Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr3466 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.5e-21
Identity = 81/288 (28.12%), Postives = 138/288 (47.92%), Query Frame = 0


Query: 145  GQILTSHQDGKI-RIWNLNF-KLVNTLPTVNDRLRRLIFPGNYVRIRR------------ 204
            G +L S  D +I R+W+++    + TL      +R L+F  N V +              
Sbjct: 1086 GAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDI 1145

Query: 205  -HKKLLWI--QHADAVTGIAVR--GDSVYSVSWDRSLKIWRGPDHRCVESVKAAHDDAVN 264
              KK L+    H + V  +A    G ++ S S D+++++W     +C+  +   H   VN
Sbjct: 1146 SSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCL-YILQGHTSWVN 1205

Query: 265  AVAVSGDG-TVYTGSADRRIRVWAKPAGEKRHVLVASLEKHKSAVNALALNGDGSLLFSG 324
            +V  + DG T+ +GS+D+ +R+W   + +     + + + H S VN++  N DGS+L SG
Sbjct: 1206 SVVFNPDGSTLASGSSDQTVRLWEINSSK----CLCTFQGHTSWVNSVVFNPDGSMLASG 1265

Query: 325  ACDRSVLVWEREDSACHVAVIGALRGHENAILCLMY--VGDLLLSGSADRTVRVWRRGGD 384
            + D++V +W+   S C    +   +GH N +  + +   G +L SGS D+TVR+W     
Sbjct: 1266 SSDKTVRLWDISSSKC----LHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSS 1325

Query: 385  GGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGELKAWKLS 411
                CL    GH   V S+    DG       + SGS D  ++ W +S
Sbjct: 1326 ---KCLHTFQGHTSWVSSVTFSPDG-----TMLASGSDDQTVRLWSIS 1356

[Close]

BLAST of Sed0004425 vs. ExPASy Swiss-Prot
Match: Q8YV57 (Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=all2124 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-21
Identity = 94/317 (29.65%), Postives = 154/317 (48.58%), Query Frame = 0


Query: 115  INVYDRATLSPAAAFTAPDSGSVKGIAFLH-GQIL-TSHQDGKIRIW-NLNFKLVNTLPT 174
            I ++ R  +SP     A +SG V  ++FLH G I+ T+  DG I++W + +  L+ TLP 
Sbjct: 1346 IRLWQRPLISPLEVL-AGNSG-VYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPG 1405

Query: 175  VNDRLRRLIF--PGNYV------------RIRRHKKL-LWIQHADAVTGI--AVRGDSVY 234
             N  +  + F   G+ +            R+R  K L   I H + V  +  +  G ++ 
Sbjct: 1406 -NKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLA 1465

Query: 235  SVSWDRSLKIWRGPDHRCVESVKAAHDDAVNAVAVSGDGTVY-TGSADRRIRVWAKPAGE 294
            S S D ++K+W   D +  +++K  H D V  V+ S DG +  + SAD+ IR+W   +G 
Sbjct: 1466 SASRDNTVKLWNVSDGKFKKTLK-GHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGN 1525

Query: 295  KRHVLVASLEKHKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHEN 354
                L+ SL  H   V ++  N DGS+L S + D++V +W   D      ++    GH N
Sbjct: 1526 ----LIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDG----HLLHTFSGHSN 1585

Query: 355  AILCLMYV--GDLLLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNG 409
             +    +   G  + S S D+TV++W+  G    + L+ L  H+  V S +   DG    
Sbjct: 1586 VVYSSSFSPDGRYIASASEDKTVKIWQIDG----HLLTTLPQHQAGVMSAIFSPDGK--- 1641

[Close]

BLAST of Sed0004425 vs. ExPASy Swiss-Prot
Match: Q9VZF4 (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster OX=7227 GN=ago PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.6e-20
Identity = 71/225 (31.56%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 190  RHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKIWRGPDHRCVESVKAAHDDAVNAVAV 249
            R  K+L       +T +   G+ + S S D +LK+W   + +C+ ++   H   V +  +
Sbjct: 985  RKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTL-VGHTGGVWSSQM 1044

Query: 250  SGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEKHKSAVNALALNGDGSLLFSGACDRS 309
            SG+  + +GS DR ++VW   +G      V +L+ H S V  + L+  GS + SG+ D +
Sbjct: 1045 SGN-IIISGSTDRTLKVWDMDSG----ACVHTLQGHTSTVRCMHLH--GSKVVSGSRDAT 1104

Query: 310  VLVWEREDSAC-HVAVIGALRGHENAILCLMYVGDLLLSGSADRTVRVWRRGGDGGFNCL 369
            + VW+ E  +C HV V     GH  A+ C+ Y G L++SG+ D  V++W         CL
Sbjct: 1105 LRVWDIEQGSCLHVLV-----GHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQ---ECL 1164

Query: 370  SVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGELKAWKLSFSN 414
              L GH   V SL    DG     + V SGSLD  ++ W +   N
Sbjct: 1165 HTLQGHTNRVYSLQF--DG-----LHVVSGSLDTSIRVWDVETGN 1186

[Close]

BLAST of Sed0004425 vs. ExPASy Swiss-Prot
Match: Q8YTC2 (Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr2800 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.3e-19
Identity = 62/201 (30.85%), Postives = 102/201 (50.75%), Query Frame = 0


Query: 210 GDSVYSVSWDRSLKIWRGPDHRCVESVKAAHDDAVNAVAVSGDG-TVYTGSADRRIRVWA 269
           G+++ S S D+++K+W   D  C++++   H D V  VA S DG T+ + +AD  I++W 
Sbjct: 738 GETLASASGDKTIKLWDIQDGTCLQTL-TGHTDWVRCVAFSPDGNTLASSAADHTIKLWD 797

Query: 270 KPAGEKRHVLVASLEKHKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGAL 329
              G+     + +L+ H   V ++A + DG  L SG+ DR++ +W      C    I   
Sbjct: 798 VSQGK----CLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYI--- 857

Query: 330 RGHENAILCLMYVGD--LLLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSD 389
            GH N++  + Y  D  +L+SGS DRT+++W         C+  L GH   V S+    D
Sbjct: 858 -GHTNSVYSIAYSPDSKILVSGSGDRTIKLW---DCQTHICIKTLHGHTNEVCSVAFSPD 917

Query: 390 GDSNGVVSVCSGSLDGELKAW 408
           G +   V     SLD  ++ W
Sbjct: 918 GQTLACV-----SLDQSVRLW 921

[Close]

BLAST of Sed0004425 vs. ExPASy TrEMBL
Match: A0A5A7SYG4 (F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001720 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 6.0e-172
Identity = 332/433 (76.67%), Postives = 366/433 (84.53%), Query Frame = 0


Query: 1   MKFRSCLLP---SAATAADKPYN----KSPSFLISDSSNFSDMSAN-SSSSTPSSDTSHS 60
           M+ RS LLP   +AAT+A +P N    +S SFLISD+S+FSD SAN SSSSTPSSDTS S
Sbjct: 1   MRVRSWLLPCSTAAATSAAEPNNIKSLQSSSFLISDASSFSDTSANSSSSSTPSSDTSCS 60

Query: 61  SLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIATA 120
           SLQSNLSL SLPSIPSLQKLP A+  D  +V +SQ  VA F LP+SHLAVHGP+L++ATA
Sbjct: 61  SLQSNLSLQSLPSIPSLQKLPIAS--DSFHVTLSQFPVASFKLPISHLAVHGPYLYVATA 120

Query: 121 HKINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNL------NFK 180
           H+INVYDR T S    F A D  SGSVKG AFL  +ILTSHQDGKIR+WNL       FK
Sbjct: 121 HEINVYDRLTFSHVTGFNARDSSSGSVKGFAFLRREILTSHQDGKIRVWNLLDKKNNQFK 180

Query: 181 LVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKI 240
           LVNTLPTVNDRLRR I P NYV +RRHKKLLWIQHADAVTG+AV  DS+YSVSWDRSLKI
Sbjct: 181 LVNTLPTVNDRLRRFILPKNYVNVRRHKKLLWIQHADAVTGLAVNNDSIYSVSWDRSLKI 240

Query: 241 WRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEK 300
           WRG DHRC+ESVKAAH+DA+NAVAVS  GTVYTGSADR+IRVWAKP  EKRHVLVA+LEK
Sbjct: 241 WRGSDHRCIESVKAAHEDAINAVAVSAGGTVYTGSADRKIRVWAKPEAEKRHVLVATLEK 300

Query: 301 HKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDL 360
           HKSAVNALALN DGSLLFSGACDRSVLVWEREDSA ++AVIGALRGH+NAILCL+YV DL
Sbjct: 301 HKSAVNALALNKDGSLLFSGACDRSVLVWEREDSANYMAVIGALRGHKNAILCLIYVSDL 360

Query: 361 LLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVV-SDGD---SNGVVSVCSGSL 414
           LLSGSADRTVRVWRRGGDG FNCL+VL GH+KPVKSLVVV S+G+   SNGVVSVCSGSL
Sbjct: 361 LLSGSADRTVRVWRRGGDGSFNCLTVLEGHKKPVKSLVVVSSEGEGMMSNGVVSVCSGSL 420

[Close]

BLAST of Sed0004425 vs. ExPASy TrEMBL
Match: A0A6J1H0Y6 (protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111458929 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 6.6e-171
Identity = 324/428 (75.70%), Postives = 358/428 (83.64%), Query Frame = 0


Query: 1   MKFRSCLLPSAATAADKPYNKSPS------FLISDSSNFSDMSANSSS---STPSSDTSH 60
           M  RS LLP  +TAA    NKSP       +L SD S+ S+MSAN SS   STPSSDTS+
Sbjct: 1   MSLRSWLLP-CSTAAKPSCNKSPEPSSSSFYLSSDGSSLSEMSANCSSSLTSTPSSDTSY 60

Query: 61  SSLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIAT 120
           SSLQ+NLSL SLPSIPSLQKLPT    D  NV+VSQ H+A F LP+SHLAVHG +L++AT
Sbjct: 61  SSLQTNLSLQSLPSIPSLQKLPTIT--DALNVSVSQHHLASFKLPISHLAVHGAYLYVAT 120

Query: 121 AHKINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNLN-----FK 180
           AH+INVYDR T S   AF A D  SGSVKGI+FL  +ILTSHQDGKIR+WNL+     FK
Sbjct: 121 AHEINVYDRITFSHVTAFNARDSSSGSVKGISFLRREILTSHQDGKIRVWNLSEKTKQFK 180

Query: 181 LVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKI 240
           LVNTLPTVNDRLRR I P NYV +RRHKK+LWIQHADAVTG+AV GDSVYSVSWDRSLK+
Sbjct: 181 LVNTLPTVNDRLRRFILPSNYVNVRRHKKVLWIQHADAVTGLAVNGDSVYSVSWDRSLKV 240

Query: 241 WRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEK 300
           W+G  HRCVESVKAAH+DA+N VAVS  GTVYTGSADR+IRVW KP  EKRHVLVA+LEK
Sbjct: 241 WQGSKHRCVESVKAAHEDAINTVAVSAGGTVYTGSADRKIRVWTKPETEKRHVLVATLEK 300

Query: 301 HKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDL 360
           HKSAVNALALN DGSLLFSGACDRSVLVWEREDSA H+AVIGALRGH NAILCL+YV DL
Sbjct: 301 HKSAVNALALNDDGSLLFSGACDRSVLVWEREDSANHMAVIGALRGHRNAILCLIYVWDL 360

Query: 361 LLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGEL 413
           LLSGSADRTVRVW+RG DG FNCLSVL GH+KPVKSLVVVS+G+S+GVVSVCSGSLDGEL
Sbjct: 361 LLSGSADRTVRVWQRGADGSFNCLSVLEGHKKPVKSLVVVSEGESDGVVSVCSGSLDGEL 420

[Close]

BLAST of Sed0004425 vs. ExPASy TrEMBL
Match: A0A0A0KVE4 (Transducin family protein OS=Cucumis sativus OX=3659 GN=Csa_5G593390 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.6e-169
Identity = 325/433 (75.06%), Postives = 363/433 (83.83%), Query Frame = 0


Query: 1   MKFRSCLLP---SAATAADKPYN----KSPSFLISDSSNFSDMSA-NSSSSTPSSDTSHS 60
           M+ RS L+P   +AAT+A +P +    +S SFL+SD+S+FSD SA +SSSSTPSSDTS S
Sbjct: 1   MRVRSWLIPCSRAAATSAAEPNHIKPPQSSSFLMSDASSFSDTSAHSSSSSTPSSDTSSS 60

Query: 61  SLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIATA 120
           SLQ+NLSL SLPSIPSLQKLP     D  +V +SQ  VA F LP+SHLAVHGP+L++ATA
Sbjct: 61  SLQTNLSLQSLPSIPSLQKLPIPT--DSFHVTLSQFPVASFKLPISHLAVHGPYLYVATA 120

Query: 121 HKINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNL------NFK 180
           H+INVYDR T S    F APD  SGSVKGIAFL  QILTSHQDGKIR+WNL       FK
Sbjct: 121 HEINVYDRLTFSHITGFNAPDSSSGSVKGIAFLPRQILTSHQDGKIRVWNLLHKKNNQFK 180

Query: 181 LVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKI 240
           LVNTLPTVNDRLRR I P NYV +RRHKKLLWIQHADAVTG+AV   S+YSVSWDRSLKI
Sbjct: 181 LVNTLPTVNDRLRRFILPKNYVNVRRHKKLLWIQHADAVTGLAVNNGSIYSVSWDRSLKI 240

Query: 241 WRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEK 300
           WRG DHRCVESVKAAH+DAVNAVAVS  GTVYTGSADR+IRVWAKP  EKRHVLVA+LEK
Sbjct: 241 WRGSDHRCVESVKAAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPEAEKRHVLVATLEK 300

Query: 301 HKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDL 360
           HKSAVNALALN DGSLLFSGACDRSVLVWEREDSA ++AVIGALRGH+NAILCL+YV DL
Sbjct: 301 HKSAVNALALNEDGSLLFSGACDRSVLVWEREDSANYMAVIGALRGHKNAILCLIYVSDL 360

Query: 361 LLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGD----SNGVVSVCSGSL 414
           LLSGSADRTVRVWRRGGDG F+CL+VL GH+KPVKSLV+VS+ +    + GVVSVCSGSL
Sbjct: 361 LLSGSADRTVRVWRRGGDGSFSCLTVLEGHKKPVKSLVIVSEAEGMMRNGGVVSVCSGSL 420

[Close]

BLAST of Sed0004425 vs. ExPASy TrEMBL
Match: A0A6J1KFF1 (protein JINGUBANG-like OS=Cucurbita maxima OX=3661 GN=LOC111492745 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 1.1e-168
Identity = 321/428 (75.00%), Postives = 358/428 (83.64%), Query Frame = 0


Query: 1   MKFRSCLLPSAATAADKPYNKSPS------FLISDSSNFSDMSANSSS---STPSSDTSH 60
           M+ RS LLP  +TAA    NK P       +L SD S+ S+MSAN SS   STPSSDTS+
Sbjct: 1   MRLRSWLLP-CSTAAKPSCNKPPEPSSSSFYLSSDGSSLSEMSANCSSSLTSTPSSDTSY 60

Query: 61  SSLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIAT 120
           SSLQ+NLSL SLPSIPSLQKLPT    D   V+VSQ H+A F LP+SHLAVHG +L++AT
Sbjct: 61  SSLQTNLSLQSLPSIPSLQKLPTIT--DALPVSVSQHHLASFKLPISHLAVHGAYLYVAT 120

Query: 121 AHKINVYDRATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNLN-----FK 180
           AH+INVYDR T S   AF   D  SGSVKGI+FL  +ILTSHQDGKIR+WNL+     FK
Sbjct: 121 AHEINVYDRITFSHLTAFNDRDSSSGSVKGISFLRREILTSHQDGKIRVWNLSENNKQFK 180

Query: 181 LVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKI 240
           LVNTLPTVNDRLRR I P NYV +RRHKK+LWIQHADAVTG+AV GDSVYSVSWDRSLK+
Sbjct: 181 LVNTLPTVNDRLRRFILPSNYVNVRRHKKVLWIQHADAVTGLAVNGDSVYSVSWDRSLKV 240

Query: 241 WRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEK 300
           W+G +HRCVESVKAAH+DA+NAVAVS  GTVYTGSADR+IRVWAKP  EKRHVLVA+LEK
Sbjct: 241 WQGSNHRCVESVKAAHEDAINAVAVSAGGTVYTGSADRKIRVWAKPETEKRHVLVATLEK 300

Query: 301 HKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDL 360
           HKSAVNALALN +GSLLFSGACDRSVLVWEREDSA H+AVIGALRGH NAILCL+YV DL
Sbjct: 301 HKSAVNALALNEEGSLLFSGACDRSVLVWEREDSANHMAVIGALRGHRNAILCLIYVSDL 360

Query: 361 LLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGEL 413
           LLSGSADRTVRVW+RG DG FNCLSVL GH+K VKSLVVVS+G+S+GVVSVCSGSLDGEL
Sbjct: 361 LLSGSADRTVRVWQRGADGSFNCLSVLEGHKKAVKSLVVVSEGESDGVVSVCSGSLDGEL 420

[Close]

BLAST of Sed0004425 vs. ExPASy TrEMBL
Match: A0A6J1G128 (protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111449705 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 6.9e-168
Identity = 316/418 (75.60%), Postives = 351/418 (83.97%), Query Frame = 0


Query: 1   MKFRSCLLPSAATAADKPYNKSPSFLISDSSNFSDMSANSSSSTPSSDTSHSSLQSNLSL 60
           M  RS LL  A  A      +S SF ISD+S    ++++SSSSTP+SDTS S+LQSNLSL
Sbjct: 1   MSVRSWLLSCATAADSNTPPQSSSFSISDTS----VNSSSSSSTPTSDTSCSTLQSNLSL 60

Query: 61  LSLPSIPSLQKLPTAAGDDVPNVAVSQLHVADFTLPVSHLAVHGPHLFIATAHKINVYDR 120
            S PSIPSLQ LPT   ++  NVAVSQLH+A F LP+SHLAVHGPHL++ATAH+INVYDR
Sbjct: 61  QSQPSIPSLQTLPTV--NNTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDR 120

Query: 121 ATLSPAAAFTAPD--SGSVKGIAFLHGQILTSHQDGKIRIWNL---NFKLVNTLPTVNDR 180
           +T S  A+  A D  SG+VKGIAFL+ QILTSHQDGKIR+WNL    FK VNTLPTVNDR
Sbjct: 121 STYSHVASINARDSSSGAVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDR 180

Query: 181 LRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVRGDSVYSVSWDRSLKIWRGPDHRCVES 240
           LRR I P NYV +RRHKK+LWIQHADAVTG+AV  +S YSVSWDRSLKIW+G DHRCVES
Sbjct: 181 LRRFILPKNYVNVRRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVES 240

Query: 241 VKAAHDDAVNAVAVSGDGTVYTGSADRRIRVWAKPAGEKRHVLVASLEKHKSAVNALALN 300
           VKAAH+DA+NAVAVS  G VYTGSADRRIRVW+KPA EKRH+L+ +LEKHKSAVNALALN
Sbjct: 241 VKAAHEDAINAVAVSAAGIVYTGSADRRIRVWSKPAAEKRHILITTLEKHKSAVNALALN 300

Query: 301 GDGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDLLLSGSADRTVR 360
            DGSLLFSGACDRSVLVWERED A H+AVIGALRGH+NAILCL+YV  LLLSGSADRTVR
Sbjct: 301 DDGSLLFSGACDRSVLVWEREDGANHMAVIGALRGHKNAILCLIYVSALLLSGSADRTVR 360

Query: 361 VWRRGGDGGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVSVCSGSLDGELKAWKLSFSN 414
           +WRR GDG FNCLSVL GHRKPVKSLVVVSDG  NGVVSVCSGSLDGELKAWKLSFSN
Sbjct: 361 IWRRVGDGSFNCLSVLEGHRKPVKSLVVVSDGLLNGVVSVCSGSLDGELKAWKLSFSN 412

[Close]

BLAST of Sed0004425 vs. TAIR 10
Match: AT1G24530.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 441.4 bits (1134), Expect = 7.8e-124
Identity = 235/396 (59.34%), Postives = 290/396 (73.23%), Query Frame = 0


Query: 21  KSPSFLISDSSNFSDMSANSSSSTPSSDTSHSSLQSNLSLLSLPSIPSLQKLPTAAGDDV 80
           KSP  L S        SA SSSS     T  SSL S+LSL +LPS+PSLQK+P+     V
Sbjct: 17  KSPKHLDSGE------SATSSSSLSDVTTGSSSLHSSLSLQTLPSVPSLQKIPSTT-VTV 76

Query: 81  PNVAVSQLHVADFTLPVSHLAVHGPHLFIATAHKINVYDRATLSPAAAFTAPD--SGSVK 140
            +   S   + + +LPV+ LAV+G +LF  + H++++YDR   +    F   D  SG+VK
Sbjct: 77  SHSVTSSFKLRERSLPVTCLAVNGGYLFAVSGHEVSIYDRDMCAHLDTFNGQDPFSGTVK 136

Query: 141 GIAFLHGQILTSHQDGKIRIWNL----NFKLVNTLPTVNDRLRRLIFPGNYVRIRRHKKL 200
            + F   +I T+HQDGKI +W L     +K + TLPT+NDRLRR   P NYV++RRHKK 
Sbjct: 137 SVGFSGEKIFTAHQDGKIGVWKLTAKSGYKQLTTLPTLNDRLRRFALPKNYVQVRRHKKR 196

Query: 201 LWIQHADAVTGIAVRGDSVYSVSWDRSLKIWRGPDHRCVESVKAAHDDAVNAVAVSGDGT 260
           LWI+HADAVT +AV    +YSVSWD++LKIWR  D RC ES+K AHDDAVNA+AVS +GT
Sbjct: 197 LWIEHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK-AHDDAVNAIAVSTNGT 256

Query: 261 VYTGSADRRIRVWAKPAGEKRHVLVASLEKHKSAVNALALNGDGSLLFSGACDRSVLVWE 320
           VYTGSADRRIRVWAKP GEKRH LVA+LEKHKSAVNALALN DGS+LFSG+CDRS+LVWE
Sbjct: 257 VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 316

Query: 321 REDSACHVAVIGALRGHENAILCLMYVGDLLLSGSADRTVRVWRRGGDGGFNCLSVLAGH 380
           RED++ ++AV GALRGH+ AIL L  V DLLLSGSADRTVR+WRRG D  ++CL VL+GH
Sbjct: 317 REDTSNYMAVRGALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGH 376

Query: 381 RKPVKSLVVVSDGDSNGVVSVCSGSLDGELKAWKLS 411
            KPVKSL  V + + + VVS+ SGSLDGE+K WK+S
Sbjct: 377 TKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVS 404

[Close]

BLAST of Sed0004425 vs. TAIR 10
Match: AT1G24130.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 312.0 bits (798), Expect = 7.2e-85
Identity = 190/410 (46.34%), Postives = 258/410 (62.93%), Query Frame = 0


Query: 32  NFSDMSANSSSSTPSSDTSHSSLQSNLSLLSLPSIPSLQKLPTAAGDDVPNVAVSQLHVA 91
           N +     + S+   S++S SS  S LS  SLP +PSL     ++  D   +A     + 
Sbjct: 13  NETRSECETKSTHHQSESSTSS--SLLSQPSLPLVPSLSFQHQSSSVDHHCLAT----LK 72

Query: 92  DFTLPVSHLAVHGPHLFIATAH-KINVYDR-ATLSPAAA------FTAPDSGSVKGIAFL 151
           D +  VS LAV    L+  +++ +I V+ R    SP  +        A  +G VK +  L
Sbjct: 73  DKSSYVSSLAVSDKLLYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVIL 132

Query: 152 HGQILTSHQDGKIRIWNL---------NFKLVNTLPTVNDRLRRLIFPGNYVRIRRHKKL 211
             +++++HQD KIR+W +          +K V TLPT+NDR + L    +YV +RRHKK 
Sbjct: 133 GDKLISAHQDHKIRVWKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSKSYVEVRRHKKC 192

Query: 212 LWIQHADAVTGIAVR--GDSVYSVSWDRSLKIWRGPDHRCVESVKAAHDDAVNAVAVSGD 271
            W+ H DAV+ +A+   G  +YS SWDRS KIWR  D +C++S++ AHDDA+NA+ VS D
Sbjct: 193 TWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKD 252

Query: 272 GTVYTGSADRRIRVWAKPAGEKRHVLVASLEKHKSAVNALALNGDGSLLFSGACDRSVLV 331
           G VYTGSAD++I+VW K   +K+H LVA+L KH SAVNALA++ DG +L+SGACDRS+LV
Sbjct: 253 GFVYTGSADKKIKVWNKK--DKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILV 312

Query: 332 WER----EDSACHVAVIGALRGHENAILCLMYVGDLLLSGSADRTVRVWRRG--GDGGFN 391
           WER    +D   H++V+GALRGH  AI+CL    DL+LSGSAD+++RVWRRG     G++
Sbjct: 313 WERLINGDDEELHMSVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVWRRGLMEKEGYS 372

Query: 392 CLSVLAGHRKPVKSLVV-VSDGDSNGVVS--VCSGSLDGELKAWKLSFSN 414
           CL+VL GH KPVKSL V VSD DSN   S  V SGSLD  LK W L  S+
Sbjct: 373 CLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNLRVSS 414

[Close]

BLAST of Sed0004425 vs. TAIR 10
Match: AT5G50120.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-71
Identity = 137/298 (45.97%), Postives = 191/298 (64.09%), Query Frame = 0


Query: 135 GSVKGIAFLHGQILTSHQDGKIRIWNLN-----------FKLVNTLPTVNDRLRRLIFPG 194
           G+VK +  L  ++ T+HQD KIR+W +N           +  + T+PT++DR  + + P 
Sbjct: 89  GAVKSLVILADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLMPK 148

Query: 195 NYVRIRRHKKLLWIQHADAVTGIAVRGDS--VYSVSWDRSLKIWRGPDHRCVESVKAAHD 254
           N V IRRHKK  W+ H DAV+G+A+  D   +YSVSWDR+LKIWR  D +C+ES   AHD
Sbjct: 149 NQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHD 208

Query: 255 DAVNAVAVSGDGTVYTGSADRRIRVWAKPAGE------KRHVLVASLEKHKSAVNALALN 314
           DA+NAVA+S +G +YTGS+D+RI+VW K   E      ++H LVA L +H S +NALAL+
Sbjct: 209 DAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALS 268

Query: 315 G-DGSLLFSGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDLLLSGSADRTV 374
           G +GSLL SG  D S+LVWER+D    + V+G LRGH  ++LCL  V D+L SGSAD+TV
Sbjct: 269 GTNGSLLHSGGSDGSILVWERDDGG-DIVVVGMLRGHTESVLCLAVVSDILCSGSADKTV 328

Query: 375 RVWRRGGDGGFNCLSVLAGHRKPVKSLVVV---SDGDSNGVVSVCSGSLDGELKAWKL 410
           R+W+      ++CL++L GH  PVK L      S         + SG LD ++K W++
Sbjct: 329 RLWKCSAK-DYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384

[Close]

BLAST of Sed0004425 vs. TAIR 10
Match: AT2G26490.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 6.8e-59
Identity = 123/294 (41.84%), Postives = 182/294 (61.90%), Query Frame = 0


Query: 133 DSGSVKGIAFLHGQILTSHQDGKIRIWNLN------FKLVNTLPTVNDRLRRLIFPGNYV 192
           +SG VK I     +I T HQDGKIR+W ++       K   TLPT+ D  +  + P NYV
Sbjct: 133 NSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYV 192

Query: 193 RIRRHKKLLWIQHADAVTGIAVRGDS--VYSVSWDRSLKIWRGPDHRCVESVKAAHDDAV 252
            +++H+  LWI+HADAV+ +++  +   +YS SWDR++K+WR  D +C+ES+  AHDDAV
Sbjct: 193 EVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI-PAHDDAV 252

Query: 253 NAVAVSGDGTVYTGSADRRIRVWAKPAGEK--RHVLVASLEKHKSAVNALALNGDGSLLF 312
           N+V  + +  V++GSAD  ++ W +    K  +H L+ +L K +SAV ALA++ +G+ ++
Sbjct: 253 NSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVY 312

Query: 313 SGACDRSVLVWEREDSACHVAVIGALRGHENAILCLMYVGDLLLSGSADRTVRVWRRGGD 372
            G+ D  V  WERE    +    G L+GH+ A+LCL   G L+ SGSAD+T+ VW+R G+
Sbjct: 313 FGSSDGLVNFWEREKQLNYG---GILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGN 372

Query: 373 GGFNCLSVLAGHRKPVKSLVVVSDGDSNGVVS----VCSGSLDGELKAWKLSFS 413
               CLSVL GH  PVK L V +D +++        V SGSLD  +K W +S S
Sbjct: 373 -IHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVSES 421

[Close]

BLAST of Sed0004425 vs. TAIR 10
Match: AT3G18950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 221.9 bits (564), Expect = 9.8e-58
Identity = 135/335 (40.30%), Postives = 191/335 (57.01%), Query Frame = 0


Query: 97  VSHLAVHGPHLFIATAHKINVYDRATLSPAAAFTAPDSGSVKGIAFL-HGQILTSHQDGK 156
           V  LA  G  LF  +  K N+     L     F +  SG VK I      +I T HQDGK
Sbjct: 141 VYSLAASGDLLFTGSDSK-NIRVWKDLKDHTGFKS-TSGLVKAIVITGDNRIFTGHQDGK 200

Query: 157 IRIWNLN------FKLVNTLPTVNDRLRRLIFPGNYVRIRRHKKLLWIQHADAVTGIAVR 216
           IR+W  +      +  + +LPT+ + L + + P NYV +RR K +L I+H DAV+ +++ 
Sbjct: 201 IRVWRGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRHYDAVSCLSLN 260

Query: 217 GD--SVYSVSWDRSLKIWRGPDHRCVESVKAAHDDAVNAVAVSGDGTVYTGSADRRIRVW 276
            +   +YS SWD++LK+WR  D +C+ES++ AHDDA+N VA   D  ++TGSAD  ++VW
Sbjct: 261 EELGLLYSGSWDKTLKVWRLSDSKCLESIQ-AHDDAINTVAAGFDDLLFTGSADGTLKVW 320

Query: 277 AKPAGEK--RHVLVASLEKHKSAVNALALNGDGSLLFSGACDRSVLVWEREDSACHVAVI 336
            +    K  +H LV  L K ++AV ALA+N   ++++ G+ D +V  WE +    H    
Sbjct: 321 KRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHG--- 380

Query: 337 GALRGHENAILCLMYVGDLLLSGSADRTVRVWRRGGDGGFNCLSVLAGHRKPVKSLVVVS 396
           G LRGH  A+LCL   G L+LSG AD+ + VWRR GDG  +CLSVL  H  PVK L  V 
Sbjct: 381 GTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAVE 440

Query: 397 D--------GDSNGVVSVCSGSLDGELKAWKLSFS 413
           D        GD   +  V SGSLD  +K W+++ S
Sbjct: 441 DDGEGHREKGDQKWI--VYSGSLDKSVKVWRVTES 467

The following BLAST results are available for this feature:

BLAST of Sed0004425 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525577.1	8.6e-173	77.36	protein JINGUBANG-like [Cucurbita pepo subsp. pepo]	[more]
KAA0034245.1	1.2e-171	76.67	F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa] >TYK15...	[more]
XP_022957580.1	1.4e-170	75.70	protein JINGUBANG-like [Cucurbita moschata]	[more]
KAG6601559.1	1.4e-170	75.70	Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038893246.1	1.2e-169	76.05	protein JINGUBANG-like [Benincasa hispida]	[more]

BLAST of Sed0004425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48716	9.5e-58	41.84	Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1	[more]
Q8YRI1	5.5e-21	28.13	Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7...	[more]
Q8YV57	9.3e-21	29.65	Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7...	[more]
Q9VZF4	4.6e-20	31.56	F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster OX=7227 GN=ago P...	[more]
Q8YTC2	2.3e-19	30.85	Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7...	[more]

BLAST of Sed0004425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYG4	6.0e-172	76.67	F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1H0Y6	6.6e-171	75.70	protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111458929 PE=4 SV=1	[more]
A0A0A0KVE4	3.6e-169	75.06	Transducin family protein OS=Cucumis sativus OX=3659 GN=Csa_5G593390 PE=4 SV=1	[more]
A0A6J1KFF1	1.1e-168	75.00	protein JINGUBANG-like OS=Cucurbita maxima OX=3661 GN=LOC111492745 PE=4 SV=1	[more]
A0A6J1G128	6.9e-168	75.60	protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111449705 PE=4 SV=1	[more]

BLAST of Sed0004425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24530.1	7.8e-124	59.34	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G24130.1	7.2e-85	46.34	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G50120.1	1.2e-71	45.97	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G26490.1	6.8e-59	41.84	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G18950.1	9.8e-58	40.30	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 395..409 score: 33.87 coord: 345..359 score: 40.44 coord: 147..161 score: 30.15
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 364..408 e-value: 0.37 score: 19.7 coord: 321..358 e-value: 3.1E-5 score: 33.4 coord: 122..160 e-value: 0.35 score: 19.9 coord: 229..268 e-value: 4.8E-6 score: 36.1 coord: 275..314 e-value: 1.2E-6 score: 38.0 coord: 190..226 e-value: 0.63 score: 18.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 279..313 e-value: 4.7E-4 score: 20.9 coord: 366..408 e-value: 0.047 score: 14.6 coord: 234..267 e-value: 0.0016 score: 19.2 coord: 326..357 e-value: 1.9E-4 score: 22.1 coord: 137..160 e-value: 0.23 score: 12.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 328..357 score: 12.17936
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 237..267 score: 10.241105
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 282..314 score: 12.914561
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 188..274 e-value: 9.2E-14 score: 52.8
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 82..187 e-value: 4.3E-7 score: 30.8
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 275..413 e-value: 1.9E-27 score: 98.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	PANTHER	PTHR22844:SF199	F21J9.19	coord: 20..412
None	No IPR available	PANTHER	PTHR22844	F-BOX AND WD40 DOMAIN PROTEIN	coord: 20..412
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 282..314 score: 10.732868
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 328..357 score: 10.15287
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 237..267 score: 8.623787
None	No IPR available	CDD	cd00200	WD40	coord: 96..408 e-value: 5.17212E-42 score: 147.867
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 93..409

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004425.1	Sed0004425.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding