Sed0004299 (gene) Chayote v1

Overview


Name	Sed0004299
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentose-5-phosphate 3-epimerase
Location	LG08: 34998118 .. 35002137 (+)
RNA-Seq Expression	Sed0004299
Synteny	Sed0004299

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAGAAATAAGTCAAAATCTGAATTCTACTGTCAAAGAAAGAAATTTGAATCTCTGTCTCTCATGTGAGCAAGAAAGAAGGCCAAGCATTGCCGATAAGCCATCCCTGAATTCTTGTGGTACAGCACATTTCATTTACCCATTTTTTCGTATTCATTTCTCTTTCAATTCTCTTGTCAAGATCTGCAAATCTTGCTCTTCCATGACCCAAAAAGTGAAGAACAAATCATAAATTCTTGCATCGTTACCCTAACATTTCAAACCCACAAAAGGGGTTTTTCAGTCTTACTCGAAAATGGCCGTTGCTTCATCATGCCAATCCCAGATAAGTGGGTTCATCGGAGGTCTCAGTTTTCACAAACCAGCGCTCTCTCAACCCAGCTCTCTTGCATTTTCAAGGTAATTTGATTATTGGGTTGCCCTTTTTTTCTTCTTTTGATTGGTTTAACCACCCCACTGAGAGGAATTTGAGATCAGTTTCTGAATCTTTGACTGCGAATGAACTAGAAGTTGTGTTTTGAATTTGCCCTGTAATTGGGGTTCCCAGTTTAATTTTGTTTGTGTTTTTTGATTCATGGCATGAGGTGATGATTCGATTCCTTCTCGTTGAAATTCTTGGATTGAACTAACGATCTTTGGGGATTCATTGTTATGAATAAACTGAATAACAATCAAGAATGAAAGAAAACGTGAGACACAATGATTTACTTAGTTCATCAATGTTGTGTTATCTACGTCCACACATTTTAATGAGAGTTAAGGAAATAAGAATACAAATGTTTGGTCAGACGAGGTTAGGGTTTTAAAAGAATTTGTATACTGCATTCTCTTACAATACTAATACAAGATTTGGTTCAAAATAAGTCCAATGTGAAAATATAAACTAGTTACATATTTTGACTAGGTTTTGAGGGGTTGCCCTCGAGCCCCCGACTAATGGACTAAGTAATCGTAGTCCAACATAGTTAAGGCATTTCAACATTTATGTGTATTTCTTTTCAATTGTAGAGCTGATTTTCTGGCAACTATTCTTATTTATTTGATTTTTTGTGATACCCATTGTGGTTTTTTGGTTTCACTTCCAACTCTGCTAGATAAAGCATTGCTTGCTGATTGTCTTCTACTTTGTAGTTGTGCTAGTATTTTCTTCTGTTCTTTCTGTGAGGATGGAGAATGTTTATGACGAAAGATTTGGTATCCAATGTGCTCCTCTTTACTTTCTGTTGTTAATTTTCTAGGAGGAGGTACAGAAATGTGGTGAAAGCTTCAGCTCGGGTTGATAGATTCTCAAAATCTGATATCATTGTCTCTCCCTCAATCCTCTCTGCCAACTTTGCAAAATTGGGAGAACAGGTTCTGCTCTGTGCTTTGATCTTTCTATCTTTTTTGTTTGTTGTTCTGTGCACCGCCAAGTAATTTATCGAATTGATTTGGAGATTTATGCATAAAGTTTTGTGGATTGACATTCTCTTCTCCTGTAGGTTAAAGCAGTGGAACTGGCAGGTTGTGATTGGATCCATGTAGATGTAATGGATGGTCGTTTTGTTCCAAATATCACAATTGGACCTCTTGTTGTTGATGCGCTACGCCCTGTGACCGATCTTCCTTTAGATGTTCATTTGGTATACTTCTTTCTCATTTTATTGTCTTTGATGTTAGCACTGATTCTTAATTACTTCTATTAACATAAACTTGTTGCATTGTAGATGATTGTGGAGCCAGACCAGCGTGTGCCAGACTTTATAAAGGCTGGTGCTGATATCGTTAGTGTTCATTGTGAGCAATCTTCCACAATCCATCTCCACCGTACTGTTAATCAAGTAAGGTTTCCTCCTCTTTGATCTAGATGGAATTAGGTGCATTTTCGCAACCCTAATAAGATATAGATCCAAATGAAGAAAAAACCTCAAATCCCAATACATTCTTTAGAAAACAACGTAAGTGTATGCTCCTACTGTGCTCGAGTAAGATTTTCTCTTTTATGCATTCTATGATGCACTGCAAGATGTAATTAGGTTCATGTTTCTGTTATTTTTTAAATCCCAAAAAATAGAGATCTAAACGAAGAGAAAACTAAAAAATCCTACAACTTTTTCATTATAAATTAAACGTGTATATGTTCTGTCTCTTCTTATTGCTCTGAAACTTTTTGGATTGAAAAATATAATCATATTGTTGGAAACTGCTTTTACATGGGTTGGGTTTACGGCTGTTTTCTTGGTTTCATTTTAATTCATGCTTTTAAGTAATGATCATATATCTTTATTCATGATGGCCATTCCTTTGAATATGATTCAGATAAAAAGTCTTGGAGCTAAAGCTGGAGTGGTCTTAAATCCTGCTACTTCACTCAGCACAATAGAATATGTTCTTGATGGTGACTCCCTCTCTCTTTCCATATAATTGCTGGGATGTTCTATTGTGAGGATTATTAAAAAGAGTTAGAATCTTTGGGAATGATATTATCTGTCAAGGGTTTTGAGGCTGTGGTATTATTTACTAGATTTTTTACATGAATTCAGGGTAGAAAATGACCATGAAAAGTGATGGGTTGATTGGGTTAGAGAATAAACCTCTGATATTTTTTAAGCCATTTGGAGATTAACAGTGGATATATCTACGATATGATGCTGCTTTTTAAAGTAACGGACATGATCCTTAGTTTTTTTTTTTATATCCGTGACTGTCTGGGCCAGCTTATGCGCACCTCGATTATTGTCACGGGGCATATTGCCTGACCCTACAATTTTTGAATACCAAGGAACCCGTAGGAAATTAATTCCTAGGTAGGTAGCCACCATGGAGATTGAACCCATCACCTTATGCACCCCAAGGCCCTCTTTAACCAATTGAGTCATCCCATGATTGTTATGATCCTTAGTTATATTAGGAGCAGAGAGTAGATGATAGGAAAATGTGGATTGGTATTTTATCTGAACAAAATGAGATGAATTTACAATGTCCTTTGCCTGTTTACAGTGGTTGATTTGGTTTTAATCATGTCTGTAAATCCTGGGTTTGGTGGGCAAAGCTTTATTGAGAGCCAAGTAAAGAAAATCTCAGAATTGAGAAGATTGTGTGCTGAAAAGGTACAGTTCCCTTTTGGTAGTTTTTTCCGTCACTTTTTCCTGATGAACTTCTCTTTCTCAGCATTACAAAGATTAAAAGCCATTGGCATTCATTTGCTTTGTTGCAGGGAGTGAACCCATGGATTGAAGTCGATGGTGGAGTCGGTCCAGCCAACGCATATAAGGTGCATTACAATTACACTCCCACCAAAACAAAAACTTTTTATTACATAAGTTTCTGAAGCATGTTTTCGATTGCCTTCGCGATTGCAGGTCATCGAGGCTGGAGCTAATGCTTTAGTTGCAGGTTCTGCTGTTTTTGGAGCTAAAGATTATACAGAAGGTATTATCCATTGAGTTTCCTCCATTCCCTCTTCTTACAAATCTTTAGAATATTTCATTACTTAATCATGCACTTCTTGAACAGCCATAAAAGGAATCAAAACGAGCAAAAGGCCCGAGGCAGTTGCAGTGTGAAAGCGACAAGATCTGAGTTGTTTCAGTTGATTGTACTGATATGTAGTTCATTACCATGTATGTTGTCCCTCTCACGCGTCCTCATTGTTTCGATCGATAGAAAATGACTATGAATATGTATGATCCTCGACATCACCTGCTGTGGCGTACCTGTTCTTACCACTTGTTTCTTCTTCTAAATGCAGAGATAATCTCCAACTGCATAGGTAGCAGAACATTGAATTCTTCAAGCCCTTGTTTCAGCCATGGTTGCCACCTTCACAGTTTTAATTCTTTGTGAAAAGAAGCCTGTTCATTGCCACTTGAAGATTTATATGTACCACAACATCTGAGTACAAATTCAATACTAGAAACTTGGGAGCAATAATATTCTACTTTTCATATTGATTGTCCAATAATCTCTTATGATATTATATTTTAAGAATATAGAAAACAAAAATATATCTATATTTATTAACTGTAATGTTATTAAG

mRNA sequence

GTTGAAGAAATAAGTCAAAATCTGAATTCTACTGTCAAAGAAAGAAATTTGAATCTCTGTCTCTCATGTGAGCAAGAAAGAAGGCCAAGCATTGCCGATAAGCCATCCCTGAATTCTTGTGGTACAGCACATTTCATTTACCCATTTTTTCGTATTCATTTCTCTTTCAATTCTCTTGTCAAGATCTGCAAATCTTGCTCTTCCATGACCCAAAAAGTGAAGAACAAATCATAAATTCTTGCATCGTTACCCTAACATTTCAAACCCACAAAAGGGGTTTTTCAGTCTTACTCGAAAATGGCCGTTGCTTCATCATGCCAATCCCAGATAAGTGGGTTCATCGGAGGTCTCAGTTTTCACAAACCAGCGCTCTCTCAACCCAGCTCTCTTGCATTTTCAAGGAGGAGGTACAGAAATGTGGTGAAAGCTTCAGCTCGGGTTGATAGATTCTCAAAATCTGATATCATTGTCTCTCCCTCAATCCTCTCTGCCAACTTTGCAAAATTGGGAGAACAGGTTAAAGCAGTGGAACTGGCAGGTTGTGATTGGATCCATGTAGATGTAATGGATGGTCGTTTTGTTCCAAATATCACAATTGGACCTCTTGTTGTTGATGCGCTACGCCCTGTGACCGATCTTCCTTTAGATGTTCATTTGATGATTGTGGAGCCAGACCAGCGTGTGCCAGACTTTATAAAGGCTGGTGCTGATATCGTTAGTGTTCATTGTGAGCAATCTTCCACAATCCATCTCCACCGTACTGTTAATCAAATAAAAAGTCTTGGAGCTAAAGCTGGAGTGGTCTTAAATCCTGCTACTTCACTCAGCACAATAGAATATGTTCTTGATGTGGTTGATTTGGTTTTAATCATGTCTGTAAATCCTGGGTTTGGTGGGCAAAGCTTTATTGAGAGCCAAGTAAAGAAAATCTCAGAATTGAGAAGATTGTGTGCTGAAAAGGGAGTGAACCCATGGATTGAAGTCGATGGTGGAGTCGGTCCAGCCAACGCATATAAGGTCATCGAGGCTGGAGCTAATGCTTTAGTTGCAGGTTCTGCTGTTTTTGGAGCTAAAGATTATACAGAAGCCATAAAAGGAATCAAAACGAGCAAAAGGCCCGAGGCAGTTGCAGTGTGAAAGCGACAAGATCTGAGTTGTTTCAGTTGATTGTACTGATATGTAGTTCATTACCATAGATAATCTCCAACTGCATAGGTAGCAGAACATTGAATTCTTCAAGCCCTTGTTTCAGCCATGGTTGCCACCTTCACAGTTTTAATTCTTTGTGAAAAGAAGCCTGTTCATTGCCACTTGAAGATTTATATGTACCACAACATCTGAGTACAAATTCAATACTAGAAACTTGGGAGCAATAATATTCTACTTTTCATATTGATTGTCCAATAATCTCTTATGATATTATATTTTAAGAATATAGAAAACAAAAATATATCTATATTTATTAACTGTAATGTTATTAAG

Coding sequence (CDS)

ATGGCCGTTGCTTCATCATGCCAATCCCAGATAAGTGGGTTCATCGGAGGTCTCAGTTTTCACAAACCAGCGCTCTCTCAACCCAGCTCTCTTGCATTTTCAAGGAGGAGGTACAGAAATGTGGTGAAAGCTTCAGCTCGGGTTGATAGATTCTCAAAATCTGATATCATTGTCTCTCCCTCAATCCTCTCTGCCAACTTTGCAAAATTGGGAGAACAGGTTAAAGCAGTGGAACTGGCAGGTTGTGATTGGATCCATGTAGATGTAATGGATGGTCGTTTTGTTCCAAATATCACAATTGGACCTCTTGTTGTTGATGCGCTACGCCCTGTGACCGATCTTCCTTTAGATGTTCATTTGATGATTGTGGAGCCAGACCAGCGTGTGCCAGACTTTATAAAGGCTGGTGCTGATATCGTTAGTGTTCATTGTGAGCAATCTTCCACAATCCATCTCCACCGTACTGTTAATCAAATAAAAAGTCTTGGAGCTAAAGCTGGAGTGGTCTTAAATCCTGCTACTTCACTCAGCACAATAGAATATGTTCTTGATGTGGTTGATTTGGTTTTAATCATGTCTGTAAATCCTGGGTTTGGTGGGCAAAGCTTTATTGAGAGCCAAGTAAAGAAAATCTCAGAATTGAGAAGATTGTGTGCTGAAAAGGGAGTGAACCCATGGATTGAAGTCGATGGTGGAGTCGGTCCAGCCAACGCATATAAGGTCATCGAGGCTGGAGCTAATGCTTTAGTTGCAGGTTCTGCTGTTTTTGGAGCTAAAGATTATACAGAAGCCATAAAAGGAATCAAAACGAGCAAAAGGCCCGAGGCAGTTGCAGTGTGA

Protein sequence

MAVASSCQSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV

Homology

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BLAST of Sed0004299 vs. NCBI nr
Match: XP_038895735.1 (ribulose-phosphate 3-epimerase, chloroplastic [Benincasa hispida])

HSP 1 Score: 509.2 bits (1310), Expect = 2.2e-140
Identity = 264/283 (93.29%), Postives = 272/283 (96.11%), Query Frame = 0


Query: 1   MAVASSC----QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS C    QS++SGFIGGL+F KP LSQP SL FSRRR+RNVVKASARVD++SKSDI
Sbjct: 1   MAVASLCQSTMQSKVSGFIGGLTFQKPPLSQPPSLTFSRRRFRNVVKASARVDKYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LRRLCAEKGVNPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAV V
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPV 283

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BLAST of Sed0004299 vs. NCBI nr
Match: XP_023001118.1 (ribulose-phosphate 3-epimerase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 507.7 bits (1306), Expect = 6.5e-140
Identity = 262/283 (92.58%), Postives = 272/283 (96.11%), Query Frame = 0


Query: 1   MAVASSCQS----QISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS CQS    Q+SGFIGGL+F KPALSQP+SL FSRRR+RNV KASARVD++SKSDI
Sbjct: 1   MAVASLCQSTMQPQVSGFIGGLTFQKPALSQPTSLPFSRRRFRNVAKASARVDKYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           +TIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGP 
Sbjct: 181 TTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPG 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRP+AV V
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPQAVPV 283

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BLAST of Sed0004299 vs. NCBI nr
Match: TYJ98906.1 (ribulose-phosphate 3-epimerase [Cucumis melo var. makuwa])

HSP 1 Score: 507.7 bits (1306), Expect = 6.5e-140
Identity = 263/281 (93.59%), Postives = 270/281 (96.09%), Query Frame = 0


Query: 1   MAVASSC----QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS C    QSQ+SGF+GG +F KP  SQPSSL FSRRR+RNVVKASARVDR+SKSDI
Sbjct: 1   MAVASLCQSTMQSQVSGFVGGRTFQKPPNSQPSSLTFSRRRFRNVVKASARVDRYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LRRLCAEKGVNPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAV 278
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAV
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAV 281

[Close]

BLAST of Sed0004299 vs. NCBI nr
Match: XP_004137418.1 (ribulose-phosphate 3-epimerase, chloroplastic [Cucumis sativus] >KGN64018.1 hypothetical protein Csa_013085 [Cucumis sativus])

HSP 1 Score: 507.3 bits (1305), Expect = 8.4e-140
Identity = 264/283 (93.29%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MAVASSCQ----SQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS CQ    SQ+SGFIGGL+F KP  SQPSSL  SRRR+RNVVKASARVD+FSKSDI
Sbjct: 1   MAVASLCQSTMKSQVSGFIGGLTFQKPPNSQPSSLTVSRRRFRNVVKASARVDKFSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANF+KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LRRLCAEKGVNPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAV V
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPV 283

[Close]

BLAST of Sed0004299 vs. NCBI nr
Match: KAG6607461.1 (Ribulose-phosphate 3-epimerase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 507.3 bits (1305), Expect = 8.4e-140
Identity = 264/283 (93.29%), Postives = 272/283 (96.11%), Query Frame = 0


Query: 1   MAVASSCQ----SQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS CQ    SQ+SG IGGL+F K ALSQP+SL FSRR Y+NVVKASARVD++SKSDI
Sbjct: 1   MAVASLCQSTMNSQVSGLIGGLTFQKLALSQPTSLTFSRRSYKNVVKASARVDKYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAVAV
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVAV 283

[Close]

BLAST of Sed0004299 vs. ExPASy Swiss-Prot
Match: Q43157 (Ribulose-phosphate 3-epimerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPE PE=1 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 2.0e-131
Identity = 244/285 (85.61%), Postives = 261/285 (91.58%), Query Frame = 0


Query: 1   MAVASSC----QSQISGFIGGLSFHK--PALSQPSSLAFSRRRYRNVVKASARVDRFSKS 60
           M+ AS C    QSQI+GF GGL+  K  P+ S P+SL F+RR+ + +VKA++RVD+FSKS
Sbjct: 1   MSAASLCQSTLQSQINGFCGGLNIRKLQPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKS 60

Query: 61  DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL 120
           DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL
Sbjct: 61  DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL 120

Query: 121 PLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPAT 180
           PLDVHLMIVEP+QRVPDFIKAGADIVSVHCE +STIHLHRTVNQIKSLGAKAGVVLNP T
Sbjct: 121 PLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGT 180

Query: 181 SLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVG 240
            LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LR++C EKGVNPWIEVDGGV 
Sbjct: 181 PLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVT 240

Query: 241 PANAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           PANAYKVIEAGANALVAGSAVFGAKDY EAIKGIK SKRPE VAV
Sbjct: 241 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPEPVAV 285

[Close]

BLAST of Sed0004299 vs. ExPASy Swiss-Prot
Match: Q43843 (Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 2.4e-129
Identity = 234/272 (86.03%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 8   QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDIIVSPSILSANF 67
           QSQISGF G     K + S P+SL F+RRR + VV AS+RVD+FSKSDIIVSPSILSANF
Sbjct: 9   QSQISGFGGSQKLQKISFSNPNSLTFTRRRIQTVVNASSRVDKFSKSDIIVSPSILSANF 68

Query: 68  AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQ 127
           +KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPLVVD+LRP+TDLPLDVHLMIVEPDQ
Sbjct: 69  SKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQ 128

Query: 128 RVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTIEYVLDVVD 187
           RVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIKSLGAKAGVVLNP T L+ IEYVLD VD
Sbjct: 129 RVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVD 188

Query: 188 LVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPANAYKVIEAGAN 247
           LVLIMSVNPGFGGQSFIESQVKKIS+LR++CAE+G+NPWIEVDGGVGP NAYKVIEAGAN
Sbjct: 189 LVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGAN 248

Query: 248 ALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           ALVAGSAVFGA DY EAIKGIKTSKRPEAVAV
Sbjct: 249 ALVAGSAVFGAPDYAEAIKGIKTSKRPEAVAV 280

[Close]

BLAST of Sed0004299 vs. ExPASy Swiss-Prot
Match: Q9SAU2 (Ribulose-5-phosphate-3-epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPE PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 7.0e-129
Identity = 241/280 (86.07%), Postives = 255/280 (91.07%), Query Frame = 0


Query: 2   AVASSC--QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDIIVS 61
           + AS C   +Q++GF  GL   +  L QP+S +FSRRR   +VKAS+RVDRFSKSDIIVS
Sbjct: 4   SAASLCCSSTQVNGF--GLRPERSLLYQPTSFSFSRRRTHGIVKASSRVDRFSKSDIIVS 63

Query: 62  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 121
           PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH
Sbjct: 64  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 123

Query: 122 LMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTI 181
           LMIVEP+QRVPDFIKAGADIVSVHCEQ STIHLHRTVNQIKSLGAKAGVVLNP T LS I
Sbjct: 124 LMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLSAI 183

Query: 182 EYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPANAY 241
           EYVLD+VDLVLIMSVNPGFGGQSFIESQVKKIS+LR++CAEKGVNPWIEVDGGV PANAY
Sbjct: 184 EYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPANAY 243

Query: 242 KVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           KVIEAGANALVAGSAVFGAKDY EAIKGIK SKRP AVAV
Sbjct: 244 KVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAVAV 281

[Close]

BLAST of Sed0004299 vs. ExPASy Swiss-Prot
Match: Q9ZTP5 (Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPE PE=1 SV=2)

HSP 1 Score: 434.9 bits (1117), Expect = 7.0e-121
Identity = 231/277 (83.39%), Postives = 244/277 (88.09%), Query Frame = 0


Query: 1   MAVASSCQSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDIIVSP 60
           MA  SS  S  S F         A S    LAFS  R    V+AS+RVD+FSK+DIIVSP
Sbjct: 1   MASPSSSSSLCSTFAS-----PRAASLGRRLAFSSPRKAFRVRASSRVDKFSKNDIIVSP 60

Query: 61  SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHL 120
           SILSANF+KLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHL
Sbjct: 61  SILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHL 120

Query: 121 MIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTIE 180
           MIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPAT L+ I+
Sbjct: 121 MIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATPLTAID 180

Query: 181 YVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPANAYK 240
           YVLDVVDLVLIMSVNPGFGGQSFIESQVKKI+ELRRLCAEKGVNPWIEVDGGVGP NAYK
Sbjct: 181 YVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRLCAEKGVNPWIEVDGGVGPKNAYK 240

Query: 241 VIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAV 278
           VIEAGANA+VAGSAVFGA DY EAIKGIKTS++P AV
Sbjct: 241 VIEAGANAIVAGSAVFGAPDYAEAIKGIKTSQKPVAV 272

[Close]

BLAST of Sed0004299 vs. ExPASy Swiss-Prot
Match: P74061 (Ribulose-phosphate 3-epimerase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rpe PE=1 SV=3)

HSP 1 Score: 309.3 bits (791), Expect = 4.4e-83
Identity = 149/221 (67.42%), Postives = 186/221 (84.16%), Query Frame = 0


Query: 55  DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL 114
           +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPL+VDA+RP+T  
Sbjct: 4   NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 63

Query: 115 PLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPAT 174
            LDVHLMIVEP++ V DF KAGADI+SVH E +++ HLHRT+ QI+ LG KAG VLNP+T
Sbjct: 64  TLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPST 123

Query: 175 SLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVG 234
            L  +EYVL V DL+LIMSVNPGFGGQSFI   + KI  LR++C E+G++PWIEVDGG+ 
Sbjct: 124 PLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLK 183

Query: 235 PANAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPE 276
           P N ++V+EAGANA+VAGSAVF A +Y EAI G++ SKRPE
Sbjct: 184 PNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNSKRPE 224

[Close]

BLAST of Sed0004299 vs. ExPASy TrEMBL
Match: A0A6J1KPK9 (Pentose-5-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111495357 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.1e-140
Identity = 262/283 (92.58%), Postives = 272/283 (96.11%), Query Frame = 0


Query: 1   MAVASSCQS----QISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS CQS    Q+SGFIGGL+F KPALSQP+SL FSRRR+RNV KASARVD++SKSDI
Sbjct: 1   MAVASLCQSTMQPQVSGFIGGLTFQKPALSQPTSLPFSRRRFRNVAKASARVDKYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           +TIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGP 
Sbjct: 181 TTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPG 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRP+AV V
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPQAVPV 283

[Close]

BLAST of Sed0004299 vs. ExPASy TrEMBL
Match: A0A5D3BIJ2 (Pentose-5-phosphate 3-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001030 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.1e-140
Identity = 263/281 (93.59%), Postives = 270/281 (96.09%), Query Frame = 0


Query: 1   MAVASSC----QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS C    QSQ+SGF+GG +F KP  SQPSSL FSRRR+RNVVKASARVDR+SKSDI
Sbjct: 1   MAVASLCQSTMQSQVSGFVGGRTFQKPPNSQPSSLTFSRRRFRNVVKASARVDRYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LRRLCAEKGVNPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAV 278
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAV
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAV 281

[Close]

BLAST of Sed0004299 vs. ExPASy TrEMBL
Match: A0A0A0LQJ1 (Pentose-5-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_1G038360 PE=3 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.1e-140
Identity = 264/283 (93.29%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MAVASSCQ----SQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS CQ    SQ+SGFIGGL+F KP  SQPSSL  SRRR+RNVVKASARVD+FSKSDI
Sbjct: 1   MAVASLCQSTMKSQVSGFIGGLTFQKPPNSQPSSLTVSRRRFRNVVKASARVDKFSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANF+KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LRRLCAEKGVNPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAV V
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPV 283

[Close]

BLAST of Sed0004299 vs. ExPASy TrEMBL
Match: A0A1S3BAG4 (Pentose-5-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103487698 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 5.3e-140
Identity = 263/283 (92.93%), Postives = 270/283 (95.41%), Query Frame = 0


Query: 1   MAVASSC----QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS C    QSQ+SGF+GG +F KP  SQPSSL FSRRR+RNVVKASARVDR+SKSDI
Sbjct: 1   MAVASLCQSTMQSQVSGFVGGRTFQKPPNSQPSSLTFSRRRFRNVVKASARVDRYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LRRLCAEKG NPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGANPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAV V
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPV 283

[Close]

BLAST of Sed0004299 vs. ExPASy TrEMBL
Match: A0A6J1KAF8 (Pentose-5-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111493142 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.6e-139
Identity = 263/283 (92.93%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MAVASSCQ----SQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDI 60
           MAVAS CQ    SQ+SG IGGL+F K ALSQP+SL FSRR Y+NVVKASARVD++SKSDI
Sbjct: 1   MAVASLCQSTMNSQVSGLIGGLTFQKLALSQPTSLTFSRRSYKNVVKASARVDKYSKSDI 60

Query: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120
           IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL
Sbjct: 61  IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPL 120

Query: 121 DVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSL 180
           DVHLMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIKSLGAKAGVVLNPATSL
Sbjct: 121 DVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKSLGAKAGVVLNPATSL 180

Query: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240
           STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA
Sbjct: 181 STIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPA 240

Query: 241 NAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           NAYKVIEAGANALVAGSAVFGAKDY EAIKGIKTSKRPEAV V
Sbjct: 241 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPV 283

[Close]

BLAST of Sed0004299 vs. TAIR 10
Match: AT5G61410.1 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 461.5 bits (1186), Expect = 5.0e-130
Identity = 241/280 (86.07%), Postives = 255/280 (91.07%), Query Frame = 0


Query: 2   AVASSC--QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDIIVS 61
           + AS C   +Q++GF  GL   +  L QP+S +FSRRR   +VKAS+RVDRFSKSDIIVS
Sbjct: 4   SAASLCCSSTQVNGF--GLRPERSLLYQPTSFSFSRRRTHGIVKASSRVDRFSKSDIIVS 63

Query: 62  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 121
           PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH
Sbjct: 64  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 123

Query: 122 LMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTI 181
           LMIVEP+QRVPDFIKAGADIVSVHCEQ STIHLHRTVNQIKSLGAKAGVVLNP T LS I
Sbjct: 124 LMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLSAI 183

Query: 182 EYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPANAY 241
           EYVLD+VDLVLIMSVNPGFGGQSFIESQVKKIS+LR++CAEKGVNPWIEVDGGV PANAY
Sbjct: 184 EYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPANAY 243

Query: 242 KVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           KVIEAGANALVAGSAVFGAKDY EAIKGIK SKRP AVAV
Sbjct: 244 KVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAVAV 281

[Close]

BLAST of Sed0004299 vs. TAIR 10
Match: AT5G61410.2 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 461.5 bits (1186), Expect = 5.0e-130
Identity = 241/280 (86.07%), Postives = 255/280 (91.07%), Query Frame = 0


Query: 2   AVASSC--QSQISGFIGGLSFHKPALSQPSSLAFSRRRYRNVVKASARVDRFSKSDIIVS 61
           + AS C   +Q++GF  GL   +  L QP+S +FSRRR   +VKAS+RVDRFSKSDIIVS
Sbjct: 4   SAASLCCSSTQVNGF--GLRPERSLLYQPTSFSFSRRRTHGIVKASSRVDRFSKSDIIVS 63

Query: 62  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 121
           PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH
Sbjct: 64  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 123

Query: 122 LMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTI 181
           LMIVEP+QRVPDFIKAGADIVSVHCEQ STIHLHRTVNQIKSLGAKAGVVLNP T LS I
Sbjct: 124 LMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLSAI 183

Query: 182 EYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPANAY 241
           EYVLD+VDLVLIMSVNPGFGGQSFIESQVKKIS+LR++CAEKGVNPWIEVDGGV PANAY
Sbjct: 184 EYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPANAY 243

Query: 242 KVIEAGANALVAGSAVFGAKDYTEAIKGIKTSKRPEAVAV 280
           KVIEAGANALVAGSAVFGAKDY EAIKGIK SKRP AVAV
Sbjct: 244 KVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAVAV 281

[Close]

BLAST of Sed0004299 vs. TAIR 10
Match: AT3G01850.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37
Identity = 86/217 (39.63%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 58  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 117
           ++PS+LS++FA L  +   +   G +W+H+D+MDG FVPN+TIG  V+++LR  T+  LD
Sbjct: 6   IAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLD 65

Query: 118 VHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLS 177
            HLM+  P   V    KAGA   + H E +   +  + V +IKS G + GV L P T + 
Sbjct: 66  CHLMVTNPMDYVAQMAKAGASGFTFHVEVAQD-NWQQLVEKIKSTGMRPGVALKPGTPVE 125

Query: 178 TIEYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVG 237
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR    +K     I+VDGG+G
Sbjct: 126 QVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALR----QKYPTLDIQVDGGLG 185

Query: 238 PANAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTS 272
           P+       AGAN +VAGS+VFGA +  + I  ++TS
Sbjct: 186 PSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTS 217

[Close]

BLAST of Sed0004299 vs. TAIR 10
Match: AT3G01850.2 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37
Identity = 86/217 (39.63%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 58  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 117
           ++PS+LS++FA L  +   +   G +W+H+D+MDG FVPN+TIG  V+++LR  T+  LD
Sbjct: 6   IAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYLD 65

Query: 118 VHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLS 177
            HLM+  P   V    KAGA   + H E +   +  + V +IKS G + GV L P T + 
Sbjct: 66  CHLMVTNPMDYVAQMAKAGASGFTFHVEVAQD-NWQQLVEKIKSTGMRPGVALKPGTPVE 125

Query: 178 TIEYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVG 237
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR    +K     I+VDGG+G
Sbjct: 126 QVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALR----QKYPTLDIQVDGGLG 185

Query: 238 PANAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTS 272
           P+       AGAN +VAGS+VFGA +  + I  ++TS
Sbjct: 186 PSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTS 217

[Close]

BLAST of Sed0004299 vs. TAIR 10
Match: AT1G63290.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-36
Identity = 86/217 (39.63%), Postives = 128/217 (58.99%), Query Frame = 0


Query: 58  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 117
           ++PS+LS++FA L  + K +   G +W+H+D+MDG FV N+TIG  V+++LR  T+  LD
Sbjct: 8   IAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNAYLD 67

Query: 118 VHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLS 177
            HLM+  P   V    KAGA   + H E +   +    V +IK+ G + GV L P T + 
Sbjct: 68  CHLMVTNPMDYVDQMAKAGASGFTFHVEVAQE-NWQELVKKIKAAGMRPGVALKPGTPVE 127

Query: 178 TIEYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVG 237
            +  +++    V++VL+M+V PGFGGQ F+ S + K+  LR     K     IEVDGG+G
Sbjct: 128 QVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMMDKVRALR----NKYPTLDIEVDGGLG 187

Query: 238 PANAYKVIEAGANALVAGSAVFGAKDYTEAIKGIKTS 272
           P+       AGAN +VAGS+VFGA    + I  ++ S
Sbjct: 188 PSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRAS 219

The following BLAST results are available for this feature:

BLAST of Sed0004299 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895735.1	2.2e-140	93.29	ribulose-phosphate 3-epimerase, chloroplastic [Benincasa hispida]	[more]
XP_023001118.1	6.5e-140	92.58	ribulose-phosphate 3-epimerase, chloroplastic-like [Cucurbita maxima]	[more]
TYJ98906.1	6.5e-140	93.59	ribulose-phosphate 3-epimerase [Cucumis melo var. makuwa]	[more]
XP_004137418.1	8.4e-140	93.29	ribulose-phosphate 3-epimerase, chloroplastic [Cucumis sativus] >KGN64018.1 hypo...	[more]
KAG6607461.1	8.4e-140	93.29	Ribulose-phosphate 3-epimerase, chloroplastic, partial [Cucurbita argyrosperma s...	[more]

BLAST of Sed0004299 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43157	2.0e-131	85.61	Ribulose-phosphate 3-epimerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=RP...	[more]
Q43843	2.4e-129	86.03	Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) OS=Solanum tuberosum OX...	[more]
Q9SAU2	7.0e-129	86.07	Ribulose-5-phosphate-3-epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZTP5	7.0e-121	83.39	Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX...	[more]
P74061	4.4e-83	67.42	Ribulose-phosphate 3-epimerase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) O...	[more]

BLAST of Sed0004299 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPK9	3.1e-140	92.58	Pentose-5-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111495357 PE=3...	[more]
A0A5D3BIJ2	3.1e-140	93.59	Pentose-5-phosphate 3-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0LQJ1	4.1e-140	93.29	Pentose-5-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_1G038360 PE=3 ...	[more]
A0A1S3BAG4	5.3e-140	92.93	Pentose-5-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103487698 PE=3 SV=...	[more]
A0A6J1KAF8	1.6e-139	92.93	Pentose-5-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111493142 PE=3...	[more]

BLAST of Sed0004299 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61410.1	5.0e-130	86.07	D-ribulose-5-phosphate-3-epimerase	[more]
AT5G61410.2	5.0e-130	86.07	D-ribulose-5-phosphate-3-epimerase	[more]
AT3G01850.1	2.2e-37	39.63	Aldolase-type TIM barrel family protein	[more]
AT3G01850.2	2.2e-37	39.63	Aldolase-type TIM barrel family protein	[more]
AT1G63290.1	3.2e-36	39.63	Aldolase-type TIM barrel family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026019	Ribulose-phosphate 3-epimerase	TIGRFAM	TIGR01163	TIGR01163	coord: 58..269 e-value: 2.7E-89 score: 296.0
IPR026019	Ribulose-phosphate 3-epimerase	HAMAP	MF_02227	RPE	coord: 55..271 score: 58.666489
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 46..275 e-value: 3.0E-97 score: 326.0
IPR000056	Ribulose-phosphate 3-epimerase-like	PFAM	PF00834	Ribul_P_3_epim	coord: 58..256 e-value: 7.1E-88 score: 293.2
IPR000056	Ribulose-phosphate 3-epimerase-like	PANTHER	PTHR11749	RIBULOSE-5-PHOSPHATE-3-EPIMERASE	coord: 15..269
IPR000056	Ribulose-phosphate 3-epimerase-like	PROSITE	PS01085	RIBUL_P_3_EPIMER_1	coord: 85..99
IPR000056	Ribulose-phosphate 3-epimerase-like	PROSITE	PS01086	RIBUL_P_3_EPIMER_2	coord: 189..211
IPR000056	Ribulose-phosphate 3-epimerase-like	CDD	cd00429	RPE	coord: 57..269 e-value: 1.55947E-128 score: 361.797
None	No IPR available	PIRSR	PIRSR001461-1	PIRSR001461-1	coord: 57..273 e-value: 1.5E-85 score: 283.6
None	No IPR available	PIRSR	PIRSR001461-2	PIRSR001461-2	coord: 57..273 e-value: 4.3E-86 score: 285.3
None	No IPR available	PIRSR	PIRSR001461-3	PIRSR001461-3	coord: 57..273 e-value: 1.5E-85 score: 283.6
None	No IPR available	PANTHER	PTHR11749:SF13	SUBFAMILY NOT NAMED	coord: 15..269
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 51..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004299.1	Sed0004299.1	mRNA
Sed0004299.2	Sed0004299.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0019323	pentose catabolic process
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
cellular_component	GO:0005829	cytosol
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004750	ribulose-phosphate 3-epimerase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives