Sed0004279 (gene) Chayote v1

Overview


Name	Sed0004279
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Upstream activation factor subunit spp27
Location	LG04: 45834062 .. 45838471 (-)
RNA-Seq Expression	Sed0004279
Synteny	Sed0004279

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAATTTCACACACAGAGAAAGCTGAGAGAGAAAGAAAGAGAGTTTGGTTCTTGACAGAGATAGAAACAAATTGAATCCCAGCGACCGTTAATTTCCGTTAATTATATGAACCAATTCTGAGCTGAAGCCACCATGGTTTCAGACCAAGACCTTTCTCAAGCTCTACAATGTCTCTTACGCGATTCTGCTTCAAACCCTAATTCCCCATTTTCTTCCCTTAACGCCGTCGTTTTGGAGTTGCAGGCCAAGCTCGGCCTTGACTTGTCTCATAAGCTCGATTTCATCCATGCCCAGATCCAATTCTTCCTTCGTTCTCATCCTCAACAACCCGTTCTTCTTCATCAGCCTCCCTCTTTGCAGAAAGACCTCTTTGCCCTCCATCAAACCCCTAATTTCCCAACTGCCCCTACTTTCGCCGCTCCGCCGGAAACAACCCCCGTCGCTCCTCCGACTGCTGTTGGCTCTGACCCGCCGAAGGACAGGTGGGGTTCTTTTGTTTTTGTTTCTAATTTTTGGGTTTTTGATTTGCTTGTTGTTCGTTTTTTGTGTGTATGTTCGTGTGAATCTCTTTCAATTTTGAAGTGGTGTTGATTTTGCGGTGTAATCGGAAAAGGGTCGGAGTTATTTGTGCACTCTGTTCTGTTTTTGGGAAATTCCACTCGAATTTTGTTGTTTTTCTTTTTACAATTGCTACTTCGACTGTAATTAGGGCTAGAAGGTAGTGAAATTGTTTGTTTACTTGTTGTTCGTTTTTGGTGTGCATGTTTGTGTGAATCTCTTTTAATTTTGTAGTAGCGTTGATTTTGTGGTGTAATTGGAAAAGGGTCGGAGTTATTTGTGAAATCTGTTTCGTTTTGGGCAATTCTACTCGATTTTTTTTTTACAATTGCTACTTCAGCTGTAATTAGGGCTAGAAGGCTGTGAAGATGTTTGTTTACTTGTTGTGAACTTTGTCGAGAGGGTTTTGTGAAGTGTGTTTAGTTCACTAATTAGTGGCTGTTGGCTTGGTCTTGTTTTACTCTCTAGGTTTCAATACTTCAAAGTTTCCATTCAATGTTGAATGTTGTTTAGCCCCTGCTTAGATTTCCACTAGGTTCAGAGGATTTCCACTAGCTGTTGAAAAAGTAAATTTCCTGTTATGATACCTTGTCAAATTTGTTTACATAGATATCTCATACGAGCATGTTGAGTTTTCATTTGTTTTTTGTTTGTTTCCTTTAAATCGTATTATTTATTTAAACTTGTTGCTAGTCTGGAATAGCTAGTTGCTAGTCTGGTCAGCACAGCCATTGAAATATGTGGACAAAATATTCATGGCAATTTGTAAGTTTGGACTTTTGCATCAGCACGGAAGTTTGAGAGGTAGGAAGTTAATCAGATGAGTTATGGAATCTACCCCAGTTTAATGGAAATAGATATTGATATATGGCATTTACTTGTGAGGAATCTTTGTCGTGTATATACACTTTTGTATGAATATCACTTTAACTTTGACCTTTCAGCATATCTCTGAAAATGATTTACGAGCCTTGGCTATCTCCTTTCCAGTCCGAGATTATATTAAGATTAAAGTAAAATTATTAAGCCCCCACACACACATACATATATCACAAACTCTAATTTTCAGTACAACTCTCGTCATACCTGGACCCCAAACACTGACTCCAGTATACCCTCATTTATACCTGCACTTCAAACACTAACTTTACGTATACCCATAGGTCATACTTGCACCTCAAACACCAATTTCATATACTTTATACCATTTTGCAAAAAATTTACCAAGCCATACCACCCTACAAAATCTTTATCCGGCAGCCAAACGCCCCCGAAGGGTCATATATATTTACTGATCTATATATGTTTCTCTTGTTTTTGAGAACTTGAAGATATATATTCTGGTCGTTTAAATTCATCTTTATCACTCTGAACGCAGCACCCAAACCAAAACTAAAAGAAGAGGAGGCCCAGGAGGTCTAAACAAGCTTTGTGGTGTTTCTCCCGAACTTCAGGTTATTGTCGGCCAACCAGAAATGCCAAGAACCGAGGTTGTTACCTCTTTCTTATTTCGTAGTTTTATATTCTCGTTTTATCGCGTATGTGGTTCATATGATGCTTGTGTGTTTGGTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACTTACAGGATCCGAGCAACAAAAGGAAAATAATATGCAATGATGAGTTGCGGGTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATTATTTCTCTTGAACCCACAAGTAAGTATCCGGTTTGATGATCAGGTCCCTCTTAGATCTGGACGAAATCAATCATTTATTTTATATAATCCTGTCAGAACCATCACATTCTAAGAAGGCACGAGTGGAGAATGAACCTGCGATCGGCGTAAAAGTTGCTGAAACTAGTATTTGTCCCTCTGTGATTATCTCTGAAGCCCTTGCAAATTTTTTTGGTGTTGATGGAAGGGAGATGCTCCAAGCAGAGGTTCTGAAACGCATATGGGAGTACATAAGAGTCAATCATCTTGAGGTTGGCTTTGGATGTTGTTCTCATAACAGCCATTTTTTCCCATTATCATTCACTTAAACTTAATGGCCTTGTATCTACTCTAAAACAGGACCCTCTAAACCCGATGGCGGTGTTGTGCGATGCAAAACTCCAAGAACTGTTTGGTTGTGAAAGCATTTCAGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGGTCGTGATAACTAATCTTCTAGGATGGTTAGTGCATTCTTTCTATCTTATATGTTGAAACAGATATTTGAGTTGAAATCGTATTTTGGAGTAATTTTTTTTTGAAACAAAGGTAACCACGCCCGTCCCTAGGCTAGACACCGTATTCTGGAGTAATTTTATGTATCTCTATTGTTGCAAGTTAACTTCCTTGTTGGCTTCATCACCATTCACATTTTTCAAAAGCATATTATTTCATCAATTGAAAACTCTGTTTGTGTTGGAGGCTGCTGAATGATTAACCTGTTATTAATTGTTCTAGTCGAAATTTTATGCTGCAGGACAACTGTAAGAAAGTTATTGTAAATTTTTAGGATGAAATGTATGAGAGTTTTGGGGGGTTTTCGGGTTCGTTCGAATCTTCAATATATCCTCTTCTTCTGTTTGCTAGGACAGATGGCAGAATAAAACAACCTAGGTTAACCTAGTGGTCAAAGAGGATTTTGAGGATCTAAGAAGTTCTGGATTCAATCCATGGTGACAATCTACCTAGAAATTAATTTTCCACAGATTATCTATCTCATGAAAATTGTTAAGATCCGGCTCGTATACTCAGGATAAAAAAGGTGGCAGGAAAAAGAAAATGGAAGAAAAAACTGTAGAAATGATTATAGCACCATAAGAAGTTCACTTAGGACTCTAAACTTGAAAGACAGGCCCTGACAGGACAACTATCTACTAGAAACTGACTAGTCTGACCTACAGTGTCACCTGGAATGGATAAAAACACATGTAATTCACCAAAGATACTAAACTAGGACTTGGAAACTCTATTAGAAATGGAAAATCAAGTTAAACGAGATTTATAAAAATACAACAGAACAAATCTAAAACTATAGAAATATAATGAAATGCAGTAATAATTACTGCTACTCCTGAATGTATTTCTGTAAAAAGTTATCCTTTTGAGTTCATTAGATCTCTTATTTTGATTATCTAGAAATGAAGAAAGAAAAATGATTTTGAGCTTTGATTTGTCCACTCTTATCTTTCCTACCTTTTAGTTATTTGAATTTCAATAGACTGGTGTTTTCCTTTTTTCCTTTTCAAATAAAGAACTGAAGGATGAGCTTCTTTCTGACTGCTTTTTCCAGCTCTGCCAGCTGTGTTTTCATACTTTACTTTTCCTTTAGTTGAAGAATTTGTTTCTTCTTCTTTTTCTTTTTCAAAAAGCACCAAACTAATGAATGCTGATCCCTTGATTGCAGTTGAAGATCGATGGTGTTAGCGACGTATATCGGGGGAGTGTTTGGAAAAGTCGATAAGGTTTTTTTTCTTCCTTTTTCTTACAAAAAAATGTTGTATTTAGTGATGATAGTGCTTTAGTTTTGGATCTTATGTTAAGGGTGGTAAGTAAGGTGTGAACTTGGGAGAATGTAATGTAAGATGGGCTTATGGCAGAGTTTATTTTGCAATTGCCTGCCAAGTCCTTGGTTTCCATTTGTATGACTTGGTGTTTAGGTTAGAATGACCCTGGGAGCTTCTAACATCCATACATTGCTTATGATGTGTAAAATTATGCTATCTACTTCACTAGTTTGTCAAATATATGTTTTTCATGTAGTAAAGCTTTAACATTTACTTTGC

mRNA sequence

TTCAATTTCACACACAGAGAAAGCTGAGAGAGAAAGAAAGAGAGTTTGGTTCTTGACAGAGATAGAAACAAATTGAATCCCAGCGACCGTTAATTTCCGTTAATTATATGAACCAATTCTGAGCTGAAGCCACCATGGTTTCAGACCAAGACCTTTCTCAAGCTCTACAATGTCTCTTACGCGATTCTGCTTCAAACCCTAATTCCCCATTTTCTTCCCTTAACGCCGTCGTTTTGGAGTTGCAGGCCAAGCTCGGCCTTGACTTGTCTCATAAGCTCGATTTCATCCATGCCCAGATCCAATTCTTCCTTCGTTCTCATCCTCAACAACCCGTTCTTCTTCATCAGCCTCCCTCTTTGCAGAAAGACCTCTTTGCCCTCCATCAAACCCCTAATTTCCCAACTGCCCCTACTTTCGCCGCTCCGCCGGAAACAACCCCCGTCGCTCCTCCGACTGCTGTTGGCTCTGACCCGCCGAAGGACAGCACCCAAACCAAAACTAAAAGAAGAGGAGGCCCAGGAGGTCTAAACAAGCTTTGTGGTGTTTCTCCCGAACTTCAGGTTATTGTCGGCCAACCAGAAATGCCAAGAACCGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACTTACAGGATCCGAGCAACAAAAGGAAAATAATATGCAATGATGAGTTGCGGGTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATTATTTCTCTTGAACCCACAAAACCATCACATTCTAAGAAGGCACGAGTGGAGAATGAACCTGCGATCGGCGTAAAAGTTGCTGAAACTAGTATTTGTCCCTCTGTGATTATCTCTGAAGCCCTTGCAAATTTTTTTGGTGTTGATGGAAGGGAGATGCTCCAAGCAGAGGTTCTGAAACGCATATGGGAGTACATAAGAGTCAATCATCTTGAGGACCCTCTAAACCCGATGGCGGTGTTGTGCGATGCAAAACTCCAAGAACTGTTTGGTTGTGAAAGCATTTCAGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGGTCGTGATAACTAATCTTCTAGGATGTTGAAGATCGATGGTGTTAGCGACGTATATCGGGGGAGTGTTTGGAAAAGTCGATAAGGTTTTTTTTCTTCCTTTTTCTTACAAAAAAATGTTGTATTTAGTGATGATAGTGCTTTAGTTTTGGATCTTATGTTAAGGGTGGTAAGTAAGGTGTGAACTTGGGAGAATGTAATGTAAGATGGGCTTATGGCAGAGTTTATTTTGCAATTGCCTGCCAAGTCCTTGGTTTCCATTTGTATGACTTGGTGTTTAGGTTAGAATGACCCTGGGAGCTTCTAACATCCATACATTGCTTATGATGTGTAAAATTATGCTATCTACTTCACTAGTTTGTCAAATATATGTTTTTCATGTAGTAAAGCTTTAACATTTACTTTGC

Coding sequence (CDS)

ATGGTTTCAGACCAAGACCTTTCTCAAGCTCTACAATGTCTCTTACGCGATTCTGCTTCAAACCCTAATTCCCCATTTTCTTCCCTTAACGCCGTCGTTTTGGAGTTGCAGGCCAAGCTCGGCCTTGACTTGTCTCATAAGCTCGATTTCATCCATGCCCAGATCCAATTCTTCCTTCGTTCTCATCCTCAACAACCCGTTCTTCTTCATCAGCCTCCCTCTTTGCAGAAAGACCTCTTTGCCCTCCATCAAACCCCTAATTTCCCAACTGCCCCTACTTTCGCCGCTCCGCCGGAAACAACCCCCGTCGCTCCTCCGACTGCTGTTGGCTCTGACCCGCCGAAGGACAGCACCCAAACCAAAACTAAAAGAAGAGGAGGCCCAGGAGGTCTAAACAAGCTTTGTGGTGTTTCTCCCGAACTTCAGGTTATTGTCGGCCAACCAGAAATGCCAAGAACCGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACTTACAGGATCCGAGCAACAAAAGGAAAATAATATGCAATGATGAGTTGCGGGTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATTATTTCTCTTGAACCCACAAAACCATCACATTCTAAGAAGGCACGAGTGGAGAATGAACCTGCGATCGGCGTAAAAGTTGCTGAAACTAGTATTTGTCCCTCTGTGATTATCTCTGAAGCCCTTGCAAATTTTTTTGGTGTTGATGGAAGGGAGATGCTCCAAGCAGAGGTTCTGAAACGCATATGGGAGTACATAAGAGTCAATCATCTTGAGGACCCTCTAAACCCGATGGCGGTGTTGTGCGATGCAAAACTCCAAGAACTGTTTGGTTGTGAAAGCATTTCAGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGGTCGTGA

Protein sequence

MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQPPSLQKDLFALHQTPNFPTAPTFAAPPETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of Sed0004279 vs. NCBI nr
Match: KAG6607774.1 (hypothetical protein SDJN03_01116, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 530.8 bits (1366), Expect = 8.1e-147
Identity = 280/340 (82.35%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPN-PFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLI 60

Query: 61  LRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFPTAP--------TFAAPP--- 120
           LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP+AP        TF A P   
Sbjct: 61  LRSHPQQP-QIHQNHHHQQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTFTAQPPPA 120

Query: 121 -ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVK 180
              T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVK
Sbjct: 121 KPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVK 180

Query: 181 QLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSK 240
           QLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SK
Sbjct: 181 QLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSK 240

Query: 241 KARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED 300
           KARVENEPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Sbjct: 241 KARVENEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLED 300

Query: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0004279 vs. NCBI nr
Match: XP_022981538.1 (uncharacterized protein LOC111480626 [Cucurbita maxima])

HSP 1 Score: 530.0 bits (1364), Expect = 1.4e-146
Identity = 280/340 (82.35%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MVS+Q+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  
Sbjct: 1   MVSEQELSEALQCLLRDSASPSNPN-PFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLI 60

Query: 61  LRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFPTAP--------TFAAPP--- 120
           LRSHPQQP  +HQ         PPS QKDL   HQ+PNFP+AP        TF A P   
Sbjct: 61  LRSHPQQP-QIHQNHHNQQQQPPPSSQKDLLPPHQSPNFPSAPSPTSSAFHTFTAQPPPA 120

Query: 121 -ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVK 180
              T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVK
Sbjct: 121 KPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVK 180

Query: 181 QLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSK 240
           QLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SK
Sbjct: 181 QLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSK 240

Query: 241 KARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED 300
           KARVENEPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Sbjct: 241 KARVENEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLED 300

Query: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0004279 vs. NCBI nr
Match: XP_022941247.1 (uncharacterized protein LOC111446611 [Cucurbita moschata] >KAG7037351.1 spp27 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.9 bits (1361), Expect = 3.1e-146
Identity = 279/340 (82.06%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPN-PFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLI 60

Query: 61  LRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFPTAP--------TFAAPP--- 120
           LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP+AP        TF A P   
Sbjct: 61  LRSHPQQP-QIHQNHHHQQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTFTAQPPPA 120

Query: 121 -ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVK 180
              T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVK
Sbjct: 121 KPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVK 180

Query: 181 QLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSK 240
           QLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SK
Sbjct: 181 QLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSK 240

Query: 241 KARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED 300
           KARVE+EPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Sbjct: 241 KARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLED 300

Query: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0004279 vs. NCBI nr
Match: XP_023525496.1 (uncharacterized protein LOC111789084 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.5 bits (1360), Expect = 4.0e-146
Identity = 278/340 (81.76%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPN-PFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLI 60

Query: 61  LRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFPTAP--------TFAAPP--- 120
           LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP+AP        TF A P   
Sbjct: 61  LRSHPQQP-QIHQNHHHQQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTFTAQPPPA 120

Query: 121 -ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVK 180
              T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVK
Sbjct: 121 KPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVK 180

Query: 181 QLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSK 240
           QLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SK
Sbjct: 181 QLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSK 240

Query: 241 KARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED 300
           KARVE+EPAI VK AE S+CPSV+ISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Sbjct: 241 KARVESEPAIAVKAAEPSVCPSVVISEALASFFGVDGREMLQSEVLRRIWEYIRANHLED 300

Query: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0004279 vs. NCBI nr
Match: XP_004150254.1 (angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015454 [Cucumis sativus])

HSP 1 Score: 521.2 bits (1341), Expect = 6.4e-144
Identity = 278/343 (81.05%), Postives = 292/343 (85.13%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF 
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPN-PFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFI 60

Query: 61  LRSHPQQP-------------VLLHQPPSLQKDLFALHQTPNFPTAP--------TFAA- 120
           LRSHPQQP                 Q PS QKDLFALHQ+PNF +AP        TF+A 
Sbjct: 61  LRSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120

Query: 121 PPETTP--VAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTE 180
           PP   P  V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTE
Sbjct: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 HSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNH 300
            SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

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BLAST of Sed0004279 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.4e-13
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 121 KTKRRGGPGG--LNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKII 180
           K KR   P    LNK   +SP+L   +G  ++ R + VK+LW YI+ ++LQDP++KR I+
Sbjct: 105 KRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTIL 164

Query: 181 CNDELRVVFETDCTDMFKMNKLL 202
           C+D+L+ VFE D   MF MNK L
Sbjct: 165 CDDKLKSVFEVDTLHMFTMNKYL 187

[Close]

BLAST of Sed0004279 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-12
Identity = 36/95 (37.89%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 137 VSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFK 196
           +S  LQ  +G  E+PRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF 
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 185

Query: 197 MNKLLAKHIIS-------LEPTKPSHSKKARVENE 225
           MNKLL KH+ +        E  K +  K+ ++ENE
Sbjct: 186 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLENE 219

[Close]

BLAST of Sed0004279 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.1e-12
Identity = 34/78 (43.59%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 137 VSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFK 196
           +S  L  ++G+ E+ RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L ++     T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFE 185

Query: 197 MNKLLAKHIISLEPTKPS 215
           M+K+LA H+   EP K S
Sbjct: 186 MHKILASHM--TEPKKIS 200

[Close]

BLAST of Sed0004279 vs. ExPASy TrEMBL
Match: A0A6J1J2D3 (uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.7e-147
Identity = 280/340 (82.35%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MVS+Q+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  
Sbjct: 1   MVSEQELSEALQCLLRDSASPSNPN-PFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLI 60

Query: 61  LRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFPTAP--------TFAAPP--- 120
           LRSHPQQP  +HQ         PPS QKDL   HQ+PNFP+AP        TF A P   
Sbjct: 61  LRSHPQQP-QIHQNHHNQQQQPPPSSQKDLLPPHQSPNFPSAPSPTSSAFHTFTAQPPPA 120

Query: 121 -ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVK 180
              T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVK
Sbjct: 121 KPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVK 180

Query: 181 QLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSK 240
           QLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SK
Sbjct: 181 QLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSK 240

Query: 241 KARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED 300
           KARVENEPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Sbjct: 241 KARVENEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLED 300

Query: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0004279 vs. ExPASy TrEMBL
Match: A0A6J1FLX5 (uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC111446611 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.5e-146
Identity = 279/340 (82.06%), Postives = 295/340 (86.76%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPN-PFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLI 60

Query: 61  LRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFPTAP--------TFAAPP--- 120
           LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP+AP        TF A P   
Sbjct: 61  LRSHPQQP-QIHQNHHHQQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTFTAQPPPA 120

Query: 121 -ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVK 180
              T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVK
Sbjct: 121 KPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVK 180

Query: 181 QLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSK 240
           QLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SK
Sbjct: 181 QLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSK 240

Query: 241 KARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED 300
           KARVE+EPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Sbjct: 241 KARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLED 300

Query: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0004279 vs. ExPASy TrEMBL
Match: A0A0A0LEG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.1e-144
Identity = 278/343 (81.05%), Postives = 292/343 (85.13%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF 
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPN-PFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFI 60

Query: 61  LRSHPQQP-------------VLLHQPPSLQKDLFALHQTPNFPTAP--------TFAA- 120
           LRSHPQQP                 Q PS QKDLFALHQ+PNF +AP        TF+A 
Sbjct: 61  LRSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120

Query: 121 PPETTP--VAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTE 180
           PP   P  V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTE
Sbjct: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 HSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNH 300
            SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Sed0004279 vs. ExPASy TrEMBL
Match: A0A1S3BI07 (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.1e-144
Identity = 277/344 (80.52%), Postives = 290/344 (84.30%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF 
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPN-PFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFI 60

Query: 61  LRSHPQQP--------------VLLHQPPSLQKDLFALHQTPNFPTAP--------TFAA 120
           LRSHPQQP                  Q PS QKDLFALHQ+PNF +AP        TF A
Sbjct: 61  LRSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTA 120

Query: 121 PPETT---PVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRT 180
            P T     V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRT
Sbjct: 121 QPPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRT 180

Query: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKP 240
           EIVKQLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKP
Sbjct: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKP 240

Query: 241 SHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVN 300
           S SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VN
Sbjct: 241 SSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVN 300

Query: 301 HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           HLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 HLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Sed0004279 vs. ExPASy TrEMBL
Match: A0A5D3C9T5 (Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002610 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.1e-144
Identity = 277/344 (80.52%), Postives = 290/344 (84.30%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFF 60
           MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF 
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPN-PFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFI 60

Query: 61  LRSHPQQP--------------VLLHQPPSLQKDLFALHQTPNFPTAP--------TFAA 120
           LRSHPQQP                  Q PS QKDLFALHQ+PNF +AP        TF A
Sbjct: 61  LRSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTA 120

Query: 121 PPETT---PVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRT 180
            P T     V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRT
Sbjct: 121 QPPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRT 180

Query: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKP 240
           EIVKQLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKP
Sbjct: 181 EIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKP 240

Query: 241 SHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVN 300
           S SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VN
Sbjct: 241 SSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVN 300

Query: 301 HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 318
           HLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 HLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Sed0004279 vs. TAIR 10
Match: AT4G22360.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 292.7 bits (748), Expect = 3.5e-79
Identity = 175/389 (44.99%), Postives = 230/389 (59.13%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLR 60
           MVSDQDL++ ++ LLR   S+P+S  +SL+++V +L+AKLGLDL+ K  FI  QI   LR
Sbjct: 1   MVSDQDLAKGVETLLRQ--SDPSS-LTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILLR 60

Query: 61  -----------------SHPQQPVLLHQP---------PSLQKDLFALHQTPNFPTAPTF 120
                            SHP  P   HQ          P + K  F L     F  +   
Sbjct: 61  AHQNPSASVASASSVQQSHPPPPPSSHQQQNLHSGVNVPPMAKGHFTLSHPSQFSVSSQS 120

Query: 121 AAPPETTPVAPP-------------------------------------------TAVGS 180
              P    + PP                                           +   +
Sbjct: 121 QQYPSHFALQPPYHSYDLNFRQPYPVYMPPQQHQHQQQSPRQQQSSVMLSHGGNASLSVN 180

Query: 181 DPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDP 240
             PK+S    TKR+GGPGGLNK+C VSPEL+V+VG+P +PRTEIV+QLWAYIRKNNLQDP
Sbjct: 181 QAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQDP 240

Query: 241 SNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPS-HSKKAR--VENEPAIG 300
           SNKRKIIC+D LRVVFETDCTDMFKMNKLLAKHI+ L+P+K S  +KKA+  VE +    
Sbjct: 241 SNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETKTETT 300

Query: 301 VKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDA 318
             ++ T+I  +V +SE L  FFG    EM   E+++R+WEYI++N+LEDP+NPMA+ CD 
Sbjct: 301 EPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAIQCDE 360

[Close]

BLAST of Sed0004279 vs. TAIR 10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.3e-38
Identity = 84/205 (40.98%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 121 KTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICN 180
           K KR+GG GG  K+C +SPELQ   G  E+ RTE+VK LW YI++NNLQDP++KR IIC+
Sbjct: 255 KPKRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICD 314

Query: 181 DELRVVFETDCTDMFKMNKLLAKHIISLE-------PTKPSHSKKARVEN-----EPAIG 240
           +  R +F  +  +MF+MNK L KHI  LE        +K   + K ++E+     EP   
Sbjct: 315 ESFRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGDSEEPNEK 374

Query: 241 VKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDA 300
            K  +  +   + +S+AL  F G     + +A+V+KR+WEYI  N L+DP +   V+CD 
Sbjct: 375 DKKQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDE 434

Query: 301 KLQELFGCESISALGIPEVLGRHHI 314
           KL+ELF  +S     + ++L  H I
Sbjct: 435 KLKELFEVDSFEDTSVSKLLTNHFI 458

[Close]

BLAST of Sed0004279 vs. TAIR 10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.4e-34
Identity = 100/358 (27.93%), Postives = 167/358 (46.65%), Query Frame = 0


Query: 1   MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLR 60
           MVSD DL   L+ +LR S     +P S    V  +L+   G++L+ K  F+  QI  FL 
Sbjct: 1   MVSDSDLVTQLREILRSSDLETTTPAS----VRRQLEVYFGVELTDKKAFVREQIDAFLE 60

Query: 61  SHPQQPVLLHQPPSLQKDLFALHQTPNFPTAPTFAAPPETTPVAPPTAVGSDPPKDSTQT 120
           S      LL   P  +++     Q                         GS+   D T+ 
Sbjct: 61  S----DALLESKPEQEEEDCNGDQNDE---------------------EGSENDDDKTEL 120

Query: 121 KTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICN 180
             K +   GG NK+C +SP+L+  +G  ++ RTE+VK++WAYIR+++LQDP+N+R I+C+
Sbjct: 121 PVKAKKRGGGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNILCD 180

Query: 181 DELRVVFETDCTDMFKMNKLLAKHI-----------------------------ISLEPT 240
           + L  +F     +MF+MNK LAKHI                             + +E  
Sbjct: 181 ESLHSLFRVKTINMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSGERDEKDVKIEEA 240

Query: 241 KPSHSKKARVENEPAIGVKVAE------------------TSICPSVIISEALANFFGVD 300
             ++ +++R E + ++  +  +                  T +C    +S  L  F G  
Sbjct: 241 LENNEEESREEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCS---LSPELQAFTGTP 300

Query: 301 GREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRH 312
             ++ + EV+K +W+YI+ N+L+DP +   ++CD  L+ LF  ESI+   + + L +H
Sbjct: 301 --QLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQMNKQLAKH 324

[Close]

BLAST of Sed0004279 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-14
Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 115 KDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNK 174
           + S  T T +R  P G+ K   VSPE+Q IV  PE+ RT+ +K++WAYI++++LQDP NK
Sbjct: 50  ESSEPTATNKR-VPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNK 109

Query: 175 RKIICNDELRVVFE-TDCTDMFKMNKLLAKHII 207
           R+I+C+++L+ +FE  D     ++ KL+  H +
Sbjct: 110 REILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141

[Close]

BLAST of Sed0004279 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 5.1e-14
Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 0


Query: 81  ALHQTPNFPTAPTFAAPPETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPE 140
           +L  +PN PT            V    A  SDP   +T TKT+    P G+ K   VS  
Sbjct: 29  SLRLSPNHPTNLRM-----VRAVTSAAAASSDP---TTTTKTRE---PRGIMKPRPVSQA 88

Query: 141 LQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFE-TDCTDMFKMNK 200
           +Q +VG PE+PRT+ +K++WAYI++++LQDP NKR I+C+++L+ +FE  +     ++ K
Sbjct: 89  MQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAK 144

Query: 201 LLAKHII 207
           L+  H +
Sbjct: 149 LIGPHFL 144

The following BLAST results are available for this feature:

BLAST of Sed0004279 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607774.1	8.1e-147	82.35	hypothetical protein SDJN03_01116, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022981538.1	1.4e-146	82.35	uncharacterized protein LOC111480626 [Cucurbita maxima]	[more]
XP_022941247.1	3.1e-146	82.06	uncharacterized protein LOC111446611 [Cucurbita moschata] >KAG7037351.1 spp27 [C...	[more]
XP_023525496.1	4.0e-146	81.76	uncharacterized protein LOC111789084 [Cucurbita pepo subsp. pepo]	[more]
XP_004150254.1	6.4e-144	81.05	angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015...	[more]

BLAST of Sed0004279 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74503	9.4e-13	45.78	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q05024	1.2e-12	37.89	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q08747	6.1e-12	43.59	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Sed0004279 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2D3	6.7e-147	82.35	uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626...	[more]
A0A6J1FLX5	1.5e-146	82.06	uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC1114466...	[more]
A0A0A0LEG4	3.1e-144	81.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
A0A1S3BI07	4.1e-144	80.52	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C9T5	4.1e-144	80.52	Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Sed0004279 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22360.1	3.5e-79	44.99	SWIB complex BAF60b domain-containing protein	[more]
AT3G19080.1	2.3e-38	40.98	SWIB complex BAF60b domain-containing protein	[more]
AT1G49520.1	3.4e-34	27.93	SWIB complex BAF60b domain-containing protein	[more]
AT2G14880.1	3.0e-14	41.94	SWIB/MDM2 domain superfamily protein	[more]
AT4G34290.1	5.1e-14	37.01	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 131..210 e-value: 2.2E-44 score: 163.4 coord: 236..317 e-value: 4.6E-9 score: 46.1
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 126..216 e-value: 1.7E-29 score: 103.5 coord: 232..316 e-value: 6.6E-20 score: 72.8
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 128..215
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 236..312
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 135..205 e-value: 2.6E-27 score: 94.5 coord: 241..311 e-value: 1.5E-18 score: 66.4
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 235..314 score: 18.992826
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 130..207 score: 21.750864
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 2..58 e-value: 1.4E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..109
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 1..76
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 113..313
None	No IPR available	PANTHER	PTHR13844:SF62	SUBFAMILY NOT NAMED	coord: 113..313 coord: 1..76
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 135..205 e-value: 5.79988E-39 score: 130.356
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 240..311 e-value: 5.98862E-20 score: 80.2801

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004279.1	Sed0004279.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus