Sed0004274 (gene) Chayote v1

Overview


Name	Sed0004274
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	LG10: 2869041 .. 2873001 (+)
RNA-Seq Expression	Sed0004274
Synteny	Sed0004274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTCCCCTCCGCCAATATGTACTAAAAAATAACCCATATAATAGTATAGACTATTTGCTCTATCCATGGTTGGGCAGCAATGGGTTTTACTTCAACATCAGCTTTCTCAGTCTGCTCTCAAATTGAAATTCCAGTACCCAAATTCTCAACCTACAATGTCAGATCATCGATTAACGATCAATTTACCATTCTTATGAAGAATCATAACCCATTGCGCAAAATCTCAATCCATTCAGCCGCAAAGAAACTCCATTCTCCCACTCACAATCCCCCCTCATCAAACCTCTCCGAATCCAAAACACCCCAGAGAAAATTTTCCAAATATTTTGTCGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATTCAAGACATGCCATTGCTTTGCCTGCTCAAACAAGCACCAAAACCCCAACAATGGGTGAAAAAAATCATGGGTTAGAAGATGATAGCGAAGAGGCGATGAGAGAGAGGATCTTGGAGCATGAACCAAGGGAAATTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCTGTTAGGTATGTTTTGAGGCTGATTGATCTTGAGCCGGACGAGGTTGAATGGAGCCTTTTGTTGGCTCTTTGTTATGAGACAATGGGGCAACTGGACTTGGCTAAAGGGTTGTTCATGGAGATTTTGGAGAAGAAACCTCTTTTTATTAGAGCTCTGCATGTATGATTTTTGCTTGACTGTGTGGTAGGAAAGTAGATTTCTGTTTTTTGTAGATTAGTGATTTTTGTTTTTATGTCATTTGGTGTGAGTTTTAAGCTTGAAATTTGTGGGTACCTGCTTTAACTAAGATGTTATCACTTATCAGTATGTAGAAACAATGTGTCCCCATGGGACAACCTAGTGTGGGTAAAGACTCGAGGGCTCCAAAGTATGCTCTTTAGAAGGTTTTAGGTTTGAAACCCATGAGTGAACTTAATTATAAATTCTTTGGTCGTCTCTTGAGTCCAGCCTTGGAATGGACGTGAGTGTCTCGGGTGTGTAGTGGGGCAAACCTCCAATTCTCGGTTATAAAAAAAAGTTGAACTTGACTGAGGGTGGTTACTAATGAGATGAATTCTTATTACTGAAAGTAATATTGAAGTTTTTTAGCAACAAATGCTAGAATTTGACTTCAATGAAAACAGTTTATATGGTCCTCGTGTCCCCAAGGGGTGACGCAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCCAAGGTCTCATGTTTGAGACTCACCTGTGACACTATTCCTTCGATGTCTCCAGGGCCTGACCTTGGGACGGGCGTGGTTACCTTGTTTAAAAAAAAAGTTAATATGGTCATGGTCTTTTACTTATATAGTTTTATTCAACTTAATCTACATCACGCTCACTAAATTTGCTGGATATGTTGTTGTTGTGAAGACCAATTTATATTATTCAATCCCATATATTACATTCAGACATGTTTTGGTATAAGATTTTTTATCCCTCATGGGAAGTTATTAATTGTTGTTGGTACGTCATAAAAACGTTAATATCATGATCTTGTCCGTGAGAATGGTACATACCTAGCTTTGTGGCTGCAAATTGTTATAGCTTTTCACAATTTTCGTCAAGTAAGTTATGTCAATGCAGATTTGAATTCCTTGGATTTGAACTGTCTTCAGGGTCTGTCATTAGTGATGCATAAGAATGACGAAGGTCGATTGGCCTTTGAGATACTCAATAAGGCTCTAGATATTGCTCGTGATGAGAAAAAAGTTATTGAGGAGAGGAGCATCAGAATACTAATTGCTCAAGTGCATGTTGTGAAGGTCATTTGCTACTTATGTTTATATGTTTGAACCATTAACTTCTGGTAACTTATCGTCTAACTGGCTGTTGTATATATGGATTTGAATTACTCCAAAAAGTTGTTAAAAACTGAGATTATGAAGAGTGGATTTTTTTTATTGACAAGCACTAGATAAAATATGTCATTATGTTTCATGAGTAAAGCTTAGGAAGGAGAATGAAAAGTAGTTAGGGGGAATAAAAAGTAGTTATAAGGAAGTGAATAGTGATTACGAGGAGAATAAAAAGTGGTTATGGAGAGTTGAATAGTGATTATGAGGGAATAAGAGGTGGTTATGGAAAGATGAATAGTGATTATGGTAAAATGAATGTTAATTGTGAAGAGAATGATTATCGGTGGCCTAAACATGAGTAAGGAGAATTATTCTCCATCTCCCCGATTTTTTTTCCTTTGCCTCAAACACCCCCTAAAATTTTGCGGGGCAACACAGATTGCTTGGTGTTGTGGGTAGAGTGAAATCACATAACTTTTATGGAAATGTGTAGATGGCAATGGTAATTTGGATATGGATTGTTTATTTTGGGTCTCTAAGTATTGGAGAATGTCTAATCTGCTTCTCTTGATTCTCTAGATTCTTGTCCAACAAAGTAGTTATGTATTTCAGGGAGAACTGGAGGAGGGCTTGAAGAAGTTTCAAGATCTCGTTGACGAGAACCCACGGGATTTTCGACCTTATCTTACCCAGGTTCTGACAAATTTTGCAGACTAACCACTCTCTGCATGTTTAATGCCCCAGCTTACTAGGGTACTTGTTTTGTACATAAATAGGGAGGATACTCTTTTTTTACTTTGTCAAGAACTAGCAAGTATTTTGAGACTATTGACATTCATTTTAACCAATAGAAGGATCTGCACCAAAGATATGGTTGTTTGTACTTGCCACATTGATTTTGTATGTTGTATGTTTAAGTTAACAATATAATACAACAAACTGAGAATTGATTAGTGAGAACAGTTAGGGGTAAGAAAAGAGTAGATATTTGAAGAGTTTCCAACCGGTTATTTAAGCTTTAGCCAAGAATTGCAGATTAAGAAGAAAAAAAAAAATAATCACTGGCTTATTGATGAAGATAATTGTATTTGAAAAGGGTACTTGAATGTTGAACTAGGAAGACATGATAGGGGGGAAGGGAAGAAATACTGAAATTAAGGATATAGATCTAACTCTATGCAATTCTTGCAGTTTTTTTTTTAATTTTTAATTCAACGAAATCGAACTCATAAGCGGTTAGTTATGAAGTCATACATCAAGTCAACTCATTGGACATTCTTGCAGGGAATTATATACAGTCTAATGGACAAGAAAAGGGAAGCTGCAGAGCAGTTTGAGATGTATCGAGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACATCATATGGTCAGCTACAACTGCCTCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCACACAAGAAGTGAAGCCAATAACAAAAGGGCCATCCGGCAATTTTGAGAGTATTTTGAATGTGATCATACCAACACCAATGCACCCGATCGACCGATTCTATTAGATCTCTACAGTTAAGTGCAGACGCTTCGACAGTATTTATGGTATACCACTTTTAAACTTGTTTGGGAGTTCATTGATAGTGAAATCACTCTGTAATGGCAAAATACATACTAAAGATAGAGAATTGACAAAAAAAGACAGTGGAGCTATCGCTTTGAATCTAGTTTCTTCATTCGAAATGTAGTTCAGTAACATCAGAGAGGAAGCAGGCTTGAAATGGTAATGATTTTGAGCTATTGATGACTGTGAACAAAGAAGATAAGAGTTCAATGGGTGTTTGGTTGCTTCAACAAAGTTGCTTATTTTGAATTTTATGCAACTCAGCAATATCAGAGTAAACAGACCTGATTTTGTTCTTTACTCTCTTCTGTTCTTTTCCTGTAAGTTATGAATATTTGAGTCTGGAATTTTCATATTAAGTTGATGGGCTGACACCAGCTTTCTTGGAAAAGAGATGTCTATTGTTTTTTAGTTAAAGAACAATTGGGTGGAACACTTACGACGGTTGAGC

mRNA sequence

TTTGTCCCCTCCGCCAATATGTACTAAAAAATAACCCATATAATAGTATAGACTATTTGCTCTATCCATGGTTGGGCAGCAATGGGTTTTACTTCAACATCAGCTTTCTCAGTCTGCTCTCAAATTGAAATTCCAGTACCCAAATTCTCAACCTACAATGTCAGATCATCGATTAACGATCAATTTACCATTCTTATGAAGAATCATAACCCATTGCGCAAAATCTCAATCCATTCAGCCGCAAAGAAACTCCATTCTCCCACTCACAATCCCCCCTCATCAAACCTCTCCGAATCCAAAACACCCCAGAGAAAATTTTCCAAATATTTTGTCGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATTCAAGACATGCCATTGCTTTGCCTGCTCAAACAAGCACCAAAACCCCAACAATGGGTGAAAAAAATCATGGGTTAGAAGATGATAGCGAAGAGGCGATGAGAGAGAGGATCTTGGAGCATGAACCAAGGGAAATTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCTGTTAGGTATGTTTTGAGGCTGATTGATCTTGAGCCGGACGAGGTTGAATGGAGCCTTTTGTTGGCTCTTTGTTATGAGACAATGGGGCAACTGGACTTGGCTAAAGGGTTGTTCATGGAGATTTTGGAGAAGAAACCTCTTTTTATTAGAGCTCTGCATGGTCTGTCATTAGTGATGCATAAGAATGACGAAGGTCGATTGGCCTTTGAGATACTCAATAAGGCTCTAGATATTGCTCGTGATGAGAAAAAAGTTATTGAGGAGAGGAGCATCAGAATACTAATTGCTCAAGTGCATGTTGTGAAGGGAGAACTGGAGGAGGGCTTGAAGAAGTTTCAAGATCTCGTTGACGAGAACCCACGGGATTTTCGACCTTATCTTACCCAGGGAATTATATACAGTCTAATGGACAAGAAAAGGGAAGCTGCAGAGCAGTTTGAGATGTATCGAGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACATCATATGGTCAGCTACAACTGCCTCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCACACAAGAAGTGAAGCCAATAACAAAAGGGCCATCCGGCAATTTTGAGAGTATTTTGAATGTGATCATACCAACACCAATGCACCCGATCGACCGATTCTATTAGATCTCTACAGTTAAGTGCAGACGCTTCGACAGTATTTATGGTATACCACTTTTAAACTTGTTTGGGAGTTCATTGATAGTGAAATCACTCTGTAATGGCAAAATACATACTAAAGATAGAGAATTGACAAAAAAAGACAGTGGAGCTATCGCTTTGAATCTAGTTTCTTCATTCGAAATGTAGTTCAGTAACATCAGAGAGGAAGCAGGCTTGAAATGGTAATGATTTTGAGCTATTGATGACTGTGAACAAAGAAGATAAGAGTTCAATGGGTGTTTGGTTGCTTCAACAAAGTTGCTTATTTTGAATTTTATGCAACTCAGCAATATCAGAGTAAACAGACCTGATTTTGTTCTTTACTCTCTTCTGTTCTTTTCCTGTAAGTTATGAATATTTGAGTCTGGAATTTTCATATTAAGTTGATGGGCTGACACCAGCTTTCTTGGAAAAGAGATGTCTATTGTTTTTTAGTTAAAGAACAATTGGGTGGAACACTTACGACGGTTGAGC

Coding sequence (CDS)

ATGGGTTTTACTTCAACATCAGCTTTCTCAGTCTGCTCTCAAATTGAAATTCCAGTACCCAAATTCTCAACCTACAATGTCAGATCATCGATTAACGATCAATTTACCATTCTTATGAAGAATCATAACCCATTGCGCAAAATCTCAATCCATTCAGCCGCAAAGAAACTCCATTCTCCCACTCACAATCCCCCCTCATCAAACCTCTCCGAATCCAAAACACCCCAGAGAAAATTTTCCAAATATTTTGTCGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATTCAAGACATGCCATTGCTTTGCCTGCTCAAACAAGCACCAAAACCCCAACAATGGGTGAAAAAAATCATGGGTTAGAAGATGATAGCGAAGAGGCGATGAGAGAGAGGATCTTGGAGCATGAACCAAGGGAAATTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCTGTTAGGTATGTTTTGAGGCTGATTGATCTTGAGCCGGACGAGGTTGAATGGAGCCTTTTGTTGGCTCTTTGTTATGAGACAATGGGGCAACTGGACTTGGCTAAAGGGTTGTTCATGGAGATTTTGGAGAAGAAACCTCTTTTTATTAGAGCTCTGCATGGTCTGTCATTAGTGATGCATAAGAATGACGAAGGTCGATTGGCCTTTGAGATACTCAATAAGGCTCTAGATATTGCTCGTGATGAGAAAAAAGTTATTGAGGAGAGGAGCATCAGAATACTAATTGCTCAAGTGCATGTTGTGAAGGGAGAACTGGAGGAGGGCTTGAAGAAGTTTCAAGATCTCGTTGACGAGAACCCACGGGATTTTCGACCTTATCTTACCCAGGGAATTATATACAGTCTAATGGACAAGAAAAGGGAAGCTGCAGAGCAGTTTGAGATGTATCGAGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACATCATATGGTCAGCTACAACTGCCTCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCACACAAGAAGTGA

Protein sequence

MGFTSTSAFSVCSQIEIPVPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHSPTHNPPSSNLSESKTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTSTKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFEILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSHKK

Homology

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BLAST of Sed0004274 vs. NCBI nr
Match: XP_038880966.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 522.3 bits (1344), Expect = 3.2e-144
Identity = 275/362 (75.97%), Postives = 305/362 (84.25%), Query Frame = 0


Query: 1   MGFTSTSAFSVCSQIE-IPVPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHS 60
           MG TSTSAFSV SQIE +  PKFS+YNVR+  N +F+IL KNH P  +   +SAAK  HS
Sbjct: 1   MGSTSTSAFSVSSQIELLHGPKFSSYNVRALPNCRFSILQKNHKPTSQSLFYSAAKNFHS 60

Query: 61  PTHNPPSSNLSE-----SKTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTS 120
           P HNPP SNLSE     S + Q K  K++VE+FVGFLVGSFIFMGCFN R+A ALP QTS
Sbjct: 61  PIHNPPFSNLSESDIRRSTSTQIKIHKHYVERFVGFLVGSFIFMGCFNVRYARALPTQTS 120

Query: 121 TKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLI 180
           +K PTM EK+  LE+DSEE MRERILEH+P  IDTLKAVLYGKMRSGKTEEA++YV RLI
Sbjct: 121 SKNPTMAEKSQALEEDSEEEMRERILEHDPSNIDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLA 240
           DLEPDEVEW LLLAL YET GQLD AK LFMEILEKKPL +RALHGL+LVMHKN+EG   
Sbjct: 181 DLEPDEVEWRLLLALYYETFGQLDTAKTLFMEILEKKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLT 300
           FE+LNKAL IARDEKK+ E+RSI ILIAQ+HVVKGELEEGLKKFQDLVDENPRDFRPYL 
Sbjct: 241 FEMLNKALAIARDEKKLTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300

Query: 301 QGIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSH 357
           QGIIYSL+DKK+EAAEQFE YRALVPDEFPQREFIDD++ +A TASREQFQKEFDAEF H
Sbjct: 301 QGIIYSLLDKKKEAAEQFEAYRALVPDEFPQREFIDDVVLAAMTASREQFQKEFDAEFMH 360

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BLAST of Sed0004274 vs. NCBI nr
Match: XP_022132537.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 512.3 bits (1318), Expect = 3.3e-141
Identity = 270/361 (74.79%), Postives = 302/361 (83.66%), Query Frame = 0


Query: 1   MGFTSTSAFSVCSQIEIPVPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHSP 60
           MG TSTSAF VCSQI +P PK S+YNVR S N +F  L KN+N        + AK  H P
Sbjct: 1   MGSTSTSAFLVCSQIILPGPKVSSYNVRKSPNSRFIGLRKNYN--------AVAKFFHFP 60

Query: 61  THNPPSSNLSESKT-----PQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTST 120
           T NPP S LSES +      QR  SKYF+EKFV  L+GSFIFMGCFN R+A+ALPAQ S+
Sbjct: 61  TLNPPVSKLSESDSCRSSPSQRNLSKYFLEKFVALLIGSFIFMGCFNVRYAMALPAQRSS 120

Query: 121 KTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLID 180
           K+PT+ EK   L +DSEE MRERILEHEPR IDTLKAVLYGKMRSGKT+EA++YV RLID
Sbjct: 121 KSPTLDEKTDTLSEDSEEEMRERILEHEPRNIDTLKAVLYGKMRSGKTKEAIKYVQRLID 180

Query: 181 LEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAF 240
           LEP+EVEW LL+ALCYETMGQLD AK LFMEILEKKPL +RALHGL+LVMHKN EG+  F
Sbjct: 181 LEPEEVEWRLLMALCYETMGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNKEGQSVF 240

Query: 241 EILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQ 300
           ++LNKALDIARDEKKV E+RSI ILIAQ+HVVKGELEEGLKKFQDLVDENPRDFRPYL Q
Sbjct: 241 DMLNKALDIARDEKKVTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQ 300

Query: 301 GIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSHK 357
           GIIYSL+DKKREAAEQFEMYRA+VPDEFPQ+EFIDDI+ SATTASREQF+KEF AEFS+K
Sbjct: 301 GIIYSLLDKKREAAEQFEMYRAVVPDEFPQKEFIDDIVLSATTASREQFEKEFAAEFSYK 353

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BLAST of Sed0004274 vs. NCBI nr
Match: KAG6595098.1 (protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 498.0 bits (1281), Expect = 6.5e-137
Identity = 262/357 (73.39%), Postives = 297/357 (83.19%), Query Frame = 0


Query: 5   STSAFSVCSQIEIPVPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHSPTHNP 64
           STSAFSV S+IE+PVPKFS YNVR S   +FT+  KN+NP  K  IHS +K  +S  H+ 
Sbjct: 3   STSAFSVFSKIELPVPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIHDA 62

Query: 65  PSSNLSES-----KTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTSTKTPT 124
           P SNLSES        QR  S YFVEK VGFLV  FIFMGCFN RH +ALPAQTS K+PT
Sbjct: 63  PFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKSPT 122

Query: 125 MGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPD 184
           M       ++DSEE MRERILEH+ R IDTLKAVLYGKM SGKTEEA++YVLRLIDLEPD
Sbjct: 123 M-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPD 182

Query: 185 EVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFEILN 244
           EVEW LLLALCYE MG+L++AKGLF+EILEK PL +RALHGL+LVMHKN+EG+  FE+LN
Sbjct: 183 EVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLN 242

Query: 245 KALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIY 304
           KALDIARD KKV E+RSI ILIAQ+HVVKGELEEGLKKFQ+LV+ENPRDFRPYL QGIIY
Sbjct: 243 KALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIY 302

Query: 305 SLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSHKK 357
           SL+D+K EAAEQFE YRALVPDEFPQREF+DD++ SATTA+REQFQKEFDAEFS+KK
Sbjct: 303 SLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

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BLAST of Sed0004274 vs. NCBI nr
Match: XP_022963051.1 (protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 497.3 bits (1279), Expect = 1.1e-136
Identity = 261/357 (73.11%), Postives = 296/357 (82.91%), Query Frame = 0


Query: 5   STSAFSVCSQIEIPVPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHSPTHNP 64
           S SAFSVCS+IE+P PKFS YNVR S   +FT+  KN+NP  K  IHS +K  +S  H+ 
Sbjct: 3   SISAFSVCSKIELPGPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIHDA 62

Query: 65  PSSNLSES-----KTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTSTKTPT 124
           P SNLSES        QR  S YFVEK VGFLV  FIFMGCFN RH +ALPAQTS K+PT
Sbjct: 63  PFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKSPT 122

Query: 125 MGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPD 184
           M       ++DSEE MRERILEH+ R IDTLKAVLYGKM SGKTEEA++YVLRLIDLEPD
Sbjct: 123 M-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPD 182

Query: 185 EVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFEILN 244
           EVEW LLLALCYE MG+L++AKGLF+EILEK PL +RALHGL+LVMHKN+EG+  FE+LN
Sbjct: 183 EVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLN 242

Query: 245 KALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIY 304
           KALDIARD KKV E+RSI ILIAQ+HVVKGELEEGLKKFQ+LV+ENPRDFRPYL QGIIY
Sbjct: 243 KALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIY 302

Query: 305 SLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSHKK 357
           SL+D+K EAAEQFE YRALVPDEFPQREF+DD++ SATTA+REQFQKEFDAEFS+KK
Sbjct: 303 SLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

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BLAST of Sed0004274 vs. NCBI nr
Match: XP_008440127.1 (PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis melo] >TYK12974.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 492.7 bits (1267), Expect = 2.7e-135
Identity = 267/362 (73.76%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MGFTSTSAFSVCSQIEIP-VPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHS 60
           M  TSTSAFSV SQIE+P  PKFS+YNVR+  N +F+IL KN+  L   S+  + K  HS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYK-LSSQSLFYSPKIFHS 60

Query: 61  PTHNPPSSNLSE-----SKTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTS 120
           P HN   SNLSE     S +PQ K SKY VEKFVGFLVGSFIFMGCFN R+A ALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 TKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLI 180
           +K PT+ EK    E DSEE M ERILEH+P  +DTLKAVLYGKMRSGKTEEA++YV RLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLA 240
           DLEPDEVEW LLLALCYET+G+L  AK LFMEIL++KPL +RALHGL+LVMHKN+EG   
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLT 300
           FE+LNKALDIARDEKK+ E RSI ILIAQ+HVVKGELEEGLKKFQ+LV+ENPRDFRP+L 
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSH 357
           QGIIYSL+DKK+EAAEQFE+Y+ALVPDEFPQREFIDDI+ SATTASREQFQKEFDAEF++
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

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BLAST of Sed0004274 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.8e-36
Identity = 93/252 (36.90%), Postives = 148/252 (58.73%), Query Frame = 0


Query: 83  FVEKFVGF-----LVGSFIFM-GCFNSRHAIALPAQTSTKTPTMGEKNHGLEDDSEEAMR 142
           F EKF  F     L+G+ + M G F++     LP +  +   T+ EK +  E+  EE + 
Sbjct: 51  FPEKFKSFAKSAILIGAAVSMTGKFST-----LPVKAESPVTTI-EKTY--EEVKEEKLS 110

Query: 143 E-----RILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPDEVEWSLLLALCY 202
           E      +L+  P  ++TL+++L  K+  G+ EEA++ + RL+  +P+E EW  L+A   
Sbjct: 111 EITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLL 170

Query: 203 ETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFEILNKALDIARDEKKV 262
             MG+ + A+ +F EIL++ PL   AL   +L+M ++ EG    + L  AL +A  E  V
Sbjct: 171 GEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLV 230

Query: 263 IEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIYSLMDKKREAAEQ 322
            E R +R++IAQ+H ++  ++E LK ++ L  E+P+DFRPY  +G+IYSL+DK  EA EQ
Sbjct: 231 KEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQ 290

Query: 323 FEMYRALVPDEF 324
           F  YR L P +F
Sbjct: 291 FAKYRELSPKKF 294

[Close]

BLAST of Sed0004274 vs. ExPASy TrEMBL
Match: A0A6J1BU39 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005371 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.6e-141
Identity = 270/361 (74.79%), Postives = 302/361 (83.66%), Query Frame = 0


Query: 1   MGFTSTSAFSVCSQIEIPVPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHSP 60
           MG TSTSAF VCSQI +P PK S+YNVR S N +F  L KN+N        + AK  H P
Sbjct: 1   MGSTSTSAFLVCSQIILPGPKVSSYNVRKSPNSRFIGLRKNYN--------AVAKFFHFP 60

Query: 61  THNPPSSNLSESKT-----PQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTST 120
           T NPP S LSES +      QR  SKYF+EKFV  L+GSFIFMGCFN R+A+ALPAQ S+
Sbjct: 61  TLNPPVSKLSESDSCRSSPSQRNLSKYFLEKFVALLIGSFIFMGCFNVRYAMALPAQRSS 120

Query: 121 KTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLID 180
           K+PT+ EK   L +DSEE MRERILEHEPR IDTLKAVLYGKMRSGKT+EA++YV RLID
Sbjct: 121 KSPTLDEKTDTLSEDSEEEMRERILEHEPRNIDTLKAVLYGKMRSGKTKEAIKYVQRLID 180

Query: 181 LEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAF 240
           LEP+EVEW LL+ALCYETMGQLD AK LFMEILEKKPL +RALHGL+LVMHKN EG+  F
Sbjct: 181 LEPEEVEWRLLMALCYETMGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNKEGQSVF 240

Query: 241 EILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQ 300
           ++LNKALDIARDEKKV E+RSI ILIAQ+HVVKGELEEGLKKFQDLVDENPRDFRPYL Q
Sbjct: 241 DMLNKALDIARDEKKVTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQ 300

Query: 301 GIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSHK 357
           GIIYSL+DKKREAAEQFEMYRA+VPDEFPQ+EFIDDI+ SATTASREQF+KEF AEFS+K
Sbjct: 301 GIIYSLLDKKREAAEQFEMYRAVVPDEFPQKEFIDDIVLSATTASREQFEKEFAAEFSYK 353

[Close]

BLAST of Sed0004274 vs. ExPASy TrEMBL
Match: A0A6J1HF02 (protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463369 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 5.4e-137
Identity = 261/357 (73.11%), Postives = 296/357 (82.91%), Query Frame = 0


Query: 5   STSAFSVCSQIEIPVPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHSPTHNP 64
           S SAFSVCS+IE+P PKFS YNVR S   +FT+  KN+NP  K  IHS +K  +S  H+ 
Sbjct: 3   SISAFSVCSKIELPGPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIHDA 62

Query: 65  PSSNLSES-----KTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTSTKTPT 124
           P SNLSES        QR  S YFVEK VGFLV  FIFMGCFN RH +ALPAQTS K+PT
Sbjct: 63  PFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKSPT 122

Query: 125 MGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPD 184
           M       ++DSEE MRERILEH+ R IDTLKAVLYGKM SGKTEEA++YVLRLIDLEPD
Sbjct: 123 M-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEPD 182

Query: 185 EVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFEILN 244
           EVEW LLLALCYE MG+L++AKGLF+EILEK PL +RALHGL+LVMHKN+EG+  FE+LN
Sbjct: 183 EVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEMLN 242

Query: 245 KALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIY 304
           KALDIARD KKV E+RSI ILIAQ+HVVKGELEEGLKKFQ+LV+ENPRDFRPYL QGIIY
Sbjct: 243 KALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGIIY 302

Query: 305 SLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSHKK 357
           SL+D+K EAAEQFE YRALVPDEFPQREF+DD++ SATTA+REQFQKEFDAEFS+KK
Sbjct: 303 SLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

[Close]

BLAST of Sed0004274 vs. ExPASy TrEMBL
Match: A0A5D3CPL4 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005710 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.3e-135
Identity = 267/362 (73.76%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MGFTSTSAFSVCSQIEIP-VPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHS 60
           M  TSTSAFSV SQIE+P  PKFS+YNVR+  N +F+IL KN+  L   S+  + K  HS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYK-LSSQSLFYSPKIFHS 60

Query: 61  PTHNPPSSNLSE-----SKTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTS 120
           P HN   SNLSE     S +PQ K SKY VEKFVGFLVGSFIFMGCFN R+A ALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 TKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLI 180
           +K PT+ EK    E DSEE M ERILEH+P  +DTLKAVLYGKMRSGKTEEA++YV RLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLA 240
           DLEPDEVEW LLLALCYET+G+L  AK LFMEIL++KPL +RALHGL+LVMHKN+EG   
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLT 300
           FE+LNKALDIARDEKK+ E RSI ILIAQ+HVVKGELEEGLKKFQ+LV+ENPRDFRP+L 
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSH 357
           QGIIYSL+DKK+EAAEQFE+Y+ALVPDEFPQREFIDDI+ SATTASREQFQKEFDAEF++
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

[Close]

BLAST of Sed0004274 vs. ExPASy TrEMBL
Match: A0A0A0KHZ0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.3e-135
Identity = 261/362 (72.10%), Postives = 296/362 (81.77%), Query Frame = 0


Query: 1   MGFTSTSAFSVCSQIEIP-VPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHS 60
           MG TS S FSV SQIE+P  PKFS+YNVR+    Q+ IL KN+    +    S AK  HS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PTHNPPSSNLSES-----KTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTS 120
           P HN P SNLSES      +PQ K SKYF+EKFVGFLVGSFIFMGCFN R+  ALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 TKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLI 180
            K P + EK    E+DSEE M ERILEH+P  +DTLKAVLYGKMRSGKTE AV+YV RLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLA 240
           DLEPDEVEW +LLALCYE +G+L  AK LFMEIL++KPL +RALHGL+LVMHKN+EG   
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLT 300
           FE+LNKALDIARDEKK+ E RSI ILIAQ+HVVKGELEEGLKKFQ+LV+ENPRDFRP+L 
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSH 357
           QGIIYSL+DKK+EAAEQFE Y+ALVPDEFPQREFIDD++ SATTASREQFQKEFDAEF++
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

[Close]

BLAST of Sed0004274 vs. ExPASy TrEMBL
Match: A0A1S3B0E6 (LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484686 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.3e-135
Identity = 267/362 (73.76%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MGFTSTSAFSVCSQIEIP-VPKFSTYNVRSSINDQFTILMKNHNPLRKISIHSAAKKLHS 60
           M  TSTSAFSV SQIE+P  PKFS+YNVR+  N +F+IL KN+  L   S+  + K  HS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYK-LSSQSLFYSPKIFHS 60

Query: 61  PTHNPPSSNLSE-----SKTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALPAQTS 120
           P HN   SNLSE     S +PQ K SKY VEKFVGFLVGSFIFMGCFN R+A ALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 TKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLI 180
           +K PT+ EK    E DSEE M ERILEH+P  +DTLKAVLYGKMRSGKTEEA++YV RLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLA 240
           DLEPDEVEW LLLALCYET+G+L  AK LFMEIL++KPL +RALHGL+LVMHKN+EG   
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLT 300
           FE+LNKALDIARDEKK+ E RSI ILIAQ+HVVKGELEEGLKKFQ+LV+ENPRDFRP+L 
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDAEFSH 357
           QGIIYSL+DKK+EAAEQFE+Y+ALVPDEFPQREFIDDI+ SATTASREQFQKEFDAEF++
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

[Close]

BLAST of Sed0004274 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 277.3 bits (708), Expect = 1.7e-74
Identity = 148/303 (48.84%), Postives = 208/303 (68.65%), Query Frame = 0


Query: 54  AKKLHSPTHNPPSSNLSESKT---PQRKFSKYFVEKFVGFLVGSFIFMGCFNSRHAIALP 113
           A +L  P +  P   L  S T     + F +    K    LVGSF+F+G  +S+ A+ALP
Sbjct: 47  APRLAQPDNFAPPLPLIRSSTSLLSSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALP 106

Query: 114 AQTSTKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYV 173
             T      +           +E M E++LE+EP  ++ +KAV+Y KMR GK E+AV+YV
Sbjct: 107 TATVVSQAEL----------EDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYV 166

Query: 174 LRLIDLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDE 233
            +L+ LEP EVEW LL ALCYETMG+L  AK L+ +IL+++PL IRALHGL++VMHK  +
Sbjct: 167 EKLMKLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD 226

Query: 234 GRLAFEILNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFR 293
             + F++L +A+++AR   +V EER+I++LI Q+H+V+G+ EEGLK FQ +V++NPRDFR
Sbjct: 227 TSV-FDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFR 286

Query: 294 PYLTQGIIYSLMDKKREAAEQFEMYRALVPDEFPQREFIDDIIWSATTASREQFQKEFDA 353
           PYL QGI+YSLMDKK EAA+QFE+Y +LVP EFPQ+ F+DD+  +A   SRE+ Q  F A
Sbjct: 287 PYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFLDDVALAAQAKSRERLQNTFKA 338

[Close]

BLAST of Sed0004274 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 4.3e-38
Identity = 111/304 (36.51%), Postives = 169/304 (55.59%), Query Frame = 0


Query: 57  LHSPTHNPPSSNLSESKTPQRKFSKY--FVEKFVGFLVGSFIFMGCFNSRH-AIALPAQT 116
           L S +    SS    S TP  K + +  F    +     + + +   + +  AIA P   
Sbjct: 41  LKSASIKASSSKFQNSITPLPKSTPFRLFKSTCITLTTAAALLLANLHLKSPAIAAPI-- 100

Query: 117 STKTPTMGEKNHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRL 176
               P++  K +   ++ E A+ E ++ H P ++D L++++  K++S K  EAV  + RL
Sbjct: 101 -APPPSVESKENVTLEEEERALDEHLITH-PSDVDALRSLMEVKIKSRKLTEAVEVIDRL 160

Query: 177 IDLEPDEVEWSLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRL 236
           I LEP+E EW +L A  +   G LDLAK  F EIL K PL + A HG  L+M  +D G  
Sbjct: 161 IKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHG--LLMAYSDAGLD 220

Query: 237 AFEI---LNKALDIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFR 296
             E+   + +A+   + E    + R  ++L+AQ+ V++G+  E LK +Q+LV E PRDFR
Sbjct: 221 LKEVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFR 280

Query: 297 PYLTQGIIYSLMDKKREAAEQFEMYRALVPDEFPQRE-FIDDIIWSATTASREQFQKEFD 354
           PYL QGIIY+L+ KK +A EQF+ +R LVP   P RE F+D++I  AT    E+ Q+E  
Sbjct: 281 PYLCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMI--ATKLFSEKAQREMA 336

[Close]

BLAST of Sed0004274 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 2.2e-37
Identity = 98/282 (34.75%), Postives = 156/282 (55.32%), Query Frame = 0


Query: 66  SSNLSESKTPQRKFSKYFVEKFVGFLVGSFIFMGCFNSR--HAIALPAQTSTKTPTMGEK 125
           S   S SK+   K S       V F   + +F+     +   AIA P   +    ++ + 
Sbjct: 48  SIKASSSKSQDSKLS-ILKSTCVSFTAAAALFLVNLQLKPSPAIAAPVAATPLMESLKQS 107

Query: 126 NHGLEDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPDEVEW 185
           N  +  + EE   E  L   P +++ L++++  +++S K  EA+  + RLI+LEP+E EW
Sbjct: 108 NGNVSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEW 167

Query: 186 SLLLALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFE-ILNKAL 245
            +L A  +   G L+ AK  F EIL K PL + A HGL +    + +   A E  + +A+
Sbjct: 168 PMLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAM 227

Query: 246 DIARDEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIYSLM 305
              + EK   + R  ++L+AQ+ V++G+  E LK +++LV E PRDFRPYL QGIIY+++
Sbjct: 228 VRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVL 287

Query: 306 DKKREAAEQFEMYRALVPDEFPQRE-FIDDIIWSATTASREQ 344
            K+ EA +QFE +R LVP   P RE F+D+++ S   A + Q
Sbjct: 288 KKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQ 328

[Close]

BLAST of Sed0004274 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 4.8e-37
Identity = 93/252 (36.90%), Postives = 148/252 (58.73%), Query Frame = 0


Query: 83  FVEKFVGF-----LVGSFIFM-GCFNSRHAIALPAQTSTKTPTMGEKNHGLEDDSEEAMR 142
           F EKF  F     L+G+ + M G F++     LP +  +   T+ EK +  E+  EE + 
Sbjct: 51  FPEKFKSFAKSAILIGAAVSMTGKFST-----LPVKAESPVTTI-EKTY--EEVKEEKLS 110

Query: 143 E-----RILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPDEVEWSLLLALCY 202
           E      +L+  P  ++TL+++L  K+  G+ EEA++ + RL+  +P+E EW  L+A   
Sbjct: 111 EITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLL 170

Query: 203 ETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFEILNKALDIARDEKKV 262
             MG+ + A+ +F EIL++ PL   AL   +L+M ++ EG    + L  AL +A  E  V
Sbjct: 171 GEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLV 230

Query: 263 IEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIYSLMDKKREAAEQ 322
            E R +R++IAQ+H ++  ++E LK ++ L  E+P+DFRPY  +G+IYSL+DK  EA EQ
Sbjct: 231 KEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQ 290

Query: 323 FEMYRALVPDEF 324
           F  YR L P +F
Sbjct: 291 FAKYRELSPKKF 294

[Close]

BLAST of Sed0004274 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-32
Identity = 74/204 (36.27%), Postives = 123/204 (60.29%), Query Frame = 0


Query: 128 EDDSEEAMRERILEHEPREIDTLKAVLYGKMRSGKTEEAVRYVLRLIDLEPDEVEWSLLL 187
           +++ EEA  E+ L   P +++ L++++  K ++   + A+  + RLI+++P+E EW +L 
Sbjct: 110 KEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILK 169

Query: 188 ALCYETMGQLDLAKGLFMEILEKKPLFIRALHGLSLVMHKNDEGRLAFEI-LNKALDIAR 247
           A      G  D A   F E+L K P  + A HGL +   +++      E  +N+A++  +
Sbjct: 170 AQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIESRINEAIEKCK 229

Query: 248 DEKKVIEERSIRILIAQVHVVKGELEEGLKKFQDLVDENPRDFRPYLTQGIIYSLMDKKR 307
            E K  + R   +LIAQ+ V+KG   E L+ +Q+LV + P+DFRPYL QG+IY+LM KK 
Sbjct: 230 KENKK-DFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKD 289

Query: 308 EAAEQFEMYRALVPDEFPQREFID 331
           EA +QF  +R LVP+  P +E++D
Sbjct: 290 EAEKQFAEFRRLVPENHPYKEYLD 312

The following BLAST results are available for this feature:

BLAST of Sed0004274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880966.1	3.2e-144	75.97	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
XP_022132537.1	3.3e-141	74.79	protein SLOW GREEN 1, chloroplastic [Momordica charantia]	[more]
KAG6595098.1	6.5e-137	73.39	protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022963051.1	1.1e-136	73.11	protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_008440127.1	2.7e-135	73.76	PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis mel...	[more]

BLAST of Sed0004274 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	6.8e-36	36.90	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]

BLAST of Sed0004274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BU39	1.6e-141	74.79	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110053...	[more]
A0A6J1HF02	5.4e-137	73.11	protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3CPL4	1.3e-135	73.76	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255...	[more]
A0A0A0KHZ0	1.3e-135	72.10	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 ...	[more]
A0A1S3B0E6	1.3e-135	73.76	LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656...	[more]

BLAST of Sed0004274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39470.1	1.7e-74	48.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	4.3e-38	36.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G37400.1	2.2e-37	34.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G18420.1	4.8e-37	36.90	Protein prenylyltransferase superfamily protein	[more]
AT5G02590.1	3.6e-32	36.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 235..255
None	No IPR available	PFAM	PF14559	TPR_19	coord: 159..213 e-value: 1.3E-5 score: 25.6
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..348
None	No IPR available	PANTHER	PTHR26312:SF137	OS05G0182100 PROTEIN	coord: 1..348
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 128..255 e-value: 6.9E-15 score: 57.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 256..330 e-value: 1.9E-5 score: 26.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 155..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004274.1	Sed0004274.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding