Sed0004269 (gene) Chayote v1

Overview


Name	Sed0004269
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transcription factor, putative
Location	LG13: 22619005 .. 22619649 (-)
RNA-Seq Expression	Sed0004269
Synteny	Sed0004269

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGATCATCATCTTAAATCTGATGATCAGATGGAGATTATCATGATGATGCAACAAGAATTCTACAGCTCTTACAACGATCTGTCGCGTCCGTTCTTCATGAACAACCCGCCGATGGAAGAACCCTCCGCGTTGGCGCAAACACCTTCATTCCCCTCCGCTTCTTCACGGTGGCGAAACCCGATGCTTTCGGAGGCGCAGAAGCAGCGATCGGTGGCGGCGATGAGGGAGATGATATTCCGAATGGCAGCGATGCAGCCAATTCACATAGACCCGGAATCGGTTAAGCCGCCAAAGAGAAGAAACGTGAAGATTTCGACCGACCCGCAGAGCGTAGCTGCTCGACATAGGAGGGAAAGAATAAGCGAGAGGATTAGGATACTTCAAAGACTGGTTCCTGGAGGTACCAAAATGGACACGGCTTCGATGCTGGACGAGGCCATACACTACGTAAAGTTCTTGAAGACACAAGTGCAGTCGCTCCAACGAGCTGCGGCGAACAGGCCAAACGGTACCCGCGGTGGCGGCAGCAGCAGCAGCGTAGGGTTTCCTTTGGAAATGTCAAGTGGAAGCTGCTATGTTCCCATGGCCAAACCTTCCCCAATGGCTCACAATGTTGAGCAATTTGGAGATGGTTAA

mRNA sequence

ATGGAAAATGATCATCATCTTAAATCTGATGATCAGATGGAGATTATCATGATGATGCAACAAGAATTCTACAGCTCTTACAACGATCTGTCGCGTCCGTTCTTCATGAACAACCCGCCGATGGAAGAACCCTCCGCGTTGGCGCAAACACCTTCATTCCCCTCCGCTTCTTCACGGTGGCGAAACCCGATGCTTTCGGAGGCGCAGAAGCAGCGATCGGTGGCGGCGATGAGGGAGATGATATTCCGAATGGCAGCGATGCAGCCAATTCACATAGACCCGGAATCGGTTAAGCCGCCAAAGAGAAGAAACGTGAAGATTTCGACCGACCCGCAGAGCGTAGCTGCTCGACATAGGAGGGAAAGAATAAGCGAGAGGATTAGGATACTTCAAAGACTGGTTCCTGGAGGTACCAAAATGGACACGGCTTCGATGCTGGACGAGGCCATACACTACGTAAAGTTCTTGAAGACACAAGTGCAGTCGCTCCAACGAGCTGCGGCGAACAGGCCAAACGGTACCCGCGGTGGCGGCAGCAGCAGCAGCGTAGGGTTTCCTTTGGAAATGTCAAGTGGAAGCTGCTATGTTCCCATGGCCAAACCTTCCCCAATGGCTCACAATGTTGAGCAATTTGGAGATGGTTAA

Coding sequence (CDS)

ATGGAAAATGATCATCATCTTAAATCTGATGATCAGATGGAGATTATCATGATGATGCAACAAGAATTCTACAGCTCTTACAACGATCTGTCGCGTCCGTTCTTCATGAACAACCCGCCGATGGAAGAACCCTCCGCGTTGGCGCAAACACCTTCATTCCCCTCCGCTTCTTCACGGTGGCGAAACCCGATGCTTTCGGAGGCGCAGAAGCAGCGATCGGTGGCGGCGATGAGGGAGATGATATTCCGAATGGCAGCGATGCAGCCAATTCACATAGACCCGGAATCGGTTAAGCCGCCAAAGAGAAGAAACGTGAAGATTTCGACCGACCCGCAGAGCGTAGCTGCTCGACATAGGAGGGAAAGAATAAGCGAGAGGATTAGGATACTTCAAAGACTGGTTCCTGGAGGTACCAAAATGGACACGGCTTCGATGCTGGACGAGGCCATACACTACGTAAAGTTCTTGAAGACACAAGTGCAGTCGCTCCAACGAGCTGCGGCGAACAGGCCAAACGGTACCCGCGGTGGCGGCAGCAGCAGCAGCGTAGGGTTTCCTTTGGAAATGTCAAGTGGAAGCTGCTATGTTCCCATGGCCAAACCTTCCCCAATGGCTCACAATGTTGAGCAATTTGGAGATGGTTAA

Protein sequence

MENDHHLKSDDQMEIIMMMQQEFYSSYNDLSRPFFMNNPPMEEPSALAQTPSFPSASSRWRNPMLSEAQKQRSVAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHNVEQFGDG

Homology

[Close]

BLAST of Sed0004269 vs. NCBI nr
Match: XP_023536625.1 (transcription factor HEC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 6.2e-66
Identity = 161/242 (66.53%), Postives = 176/242 (72.73%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSYN-----------------------DLSR 60
           MEND  LKS+DQMEI+MMMQQ     EFY+  +                       + S 
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSS 60

Query: 61  PFFMNNPPMEEPSALAQTPSFPSASSRWRNP-MLSEAQKQRSVAAMREMIFRMAAMQPIH 120
           P F NN P   P    QT  FP+ SSRWRN    ++ QKQRSVAAMREMIFR+A MQPI 
Sbjct: 61  PPFTNNLPYNLP----QTVPFPT-SSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQ 120

Query: 121 IDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180
           IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH
Sbjct: 121 IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180

Query: 181 YVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHNVEQF 214
           YVKFLKTQVQSL+RAA NRP       ++S VGFPLEMSSGS YVPMAKPS M HN+EQ+
Sbjct: 181 YVKFLKTQVQSLERAATNRPLPDAAAAAASGVGFPLEMSSGS-YVPMAKPSQMTHNLEQY 235

[Close]

BLAST of Sed0004269 vs. NCBI nr
Match: XP_022975973.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 1.5e-64
Identity = 161/242 (66.53%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSYN-----------------------DLSR 60
           MEND  LKS+DQMEI+MMMQQ     EFY+  +                       + S 
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSS 60

Query: 61  PFFMNNPPMEEPSALAQTPSFPSASSRWRNP-MLSEAQKQRSVAAMREMIFRMAAMQPIH 120
           P F NN P   P    QT  FP+ SSRWRN    ++ QKQRSVAAMREMIFR+A MQPI 
Sbjct: 61  PPFTNNLPYNLP----QTVPFPT-SSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQ 120

Query: 121 IDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180
           IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH
Sbjct: 121 IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180

Query: 181 YVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHNVEQF 214
           YVKFLKTQVQSL+RAA NRP        +S VGFPLEMSSGS YVPMAKPS M HN+EQ+
Sbjct: 181 YVKFLKTQVQSLERAATNRPL-PDAAAPASGVGFPLEMSSGS-YVPMAKPSQMTHNLEQY 234

[Close]

BLAST of Sed0004269 vs. NCBI nr
Match: KAG7025068.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.5 bits (654), Expect = 2.0e-64
Identity = 160/243 (65.84%), Postives = 176/243 (72.43%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSYN-----------------------DLSR 60
           MEND  LKS+DQMEI+MMMQQ     EFY+  +                       + S 
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSS 60

Query: 61  PFFMNNPPMEEPSALAQTPSFPSASSRWRNP-MLSEAQKQRSVAAMREMIFRMAAMQPIH 120
           P F NN P   P    QT  FP+ SSRWRN    ++ QKQRSVAAMREMIFR+A MQPI 
Sbjct: 61  PPFTNNLPYNLP----QTVPFPT-SSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQ 120

Query: 121 IDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180
           IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH
Sbjct: 121 IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180

Query: 181 YVKFLKTQVQSLQRAAANRP-NGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHNVEQ 214
           YVKFLKTQVQSL+RAA NRP        ++S VGFPLEMSSGS YVPMAKPS + HN+EQ
Sbjct: 181 YVKFLKTQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGS-YVPMAKPSQITHNLEQ 236

[Close]

BLAST of Sed0004269 vs. NCBI nr
Match: XP_022936595.1 (transcription factor HEC2-like [Cucurbita moschata])

HSP 1 Score: 255.4 bits (651), Expect = 4.4e-64
Identity = 160/246 (65.04%), Postives = 175/246 (71.14%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSYN-----------------------DLSR 60
           MEND  LKS+DQMEI+MMMQQ     EFY+  +                       + S 
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSS 60

Query: 61  PFFMNNPPMEEPSALAQTPSFPSASSRWRNP-MLSEAQKQRSVAAMREMIFRMAAMQPIH 120
           P F NN P   P    QT  FP+ SSRWRN    ++ QKQRSVAAMREMIFR+A MQPI 
Sbjct: 61  PPFTNNLPYNLP----QTVPFPT-SSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQ 120

Query: 121 IDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180
           IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH
Sbjct: 121 IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180

Query: 181 YVKFLKTQVQSLQRAAANRP----NGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHN 214
           YVKFLKTQVQSL+RAA NRP           ++  VGFPLEMSSGS YVPMAKPS M HN
Sbjct: 181 YVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGS-YVPMAKPSQMTHN 239

[Close]

BLAST of Sed0004269 vs. NCBI nr
Match: KAG6591384.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247.7 bits (631), Expect = 9.3e-62
Identity = 152/232 (65.52%), Postives = 167/232 (71.98%), Query Frame = 0


Query: 13  MEIIMMMQQ-----EFYSSYN-----------------------DLSRPFFMNNPPMEEP 72
           MEI+MMMQQ     EFY+  +                       + S P F NN P   P
Sbjct: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60

Query: 73  SALAQTPSFPSASSRWRNP-MLSEAQKQRSVAAMREMIFRMAAMQPIHIDPESVKPPKRR 132
               QT  FP+ SSRWRN    ++ QKQRSVAAMREMIFR+A MQPI IDPE+VKPPKRR
Sbjct: 61  ----QTVPFPT-SSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRR 120

Query: 133 NVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 192
           NVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL
Sbjct: 121 NVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 180

Query: 193 QRAAANR--PNGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHNVEQFGD 214
           +RAA NR  P+      ++S VGFPLEMSSGS YVPMAKPS M HN+EQ+GD
Sbjct: 181 ERAATNRPLPDAAAAAAAASGVGFPLEMSSGS-YVPMAKPSQMTHNLEQYGD 226

[Close]

BLAST of Sed0004269 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-40
Identity = 101/188 (53.72%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 23  FYSSYNDLSRPFFMNNPPMEEPSALAQTPSFPSASSRWRNPM------------------ 82
           F+S  ++ + PF  N+   +   ++   P F   S    NP                   
Sbjct: 26  FFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLTNPSSISPNTAYSSVFLDKRNN 85

Query: 83  LSEAQKQRSVAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERIS 142
            +      ++AAMREMIFR+A MQPIHIDPE+VKPPKRRNV+IS DPQSVAARHRRERIS
Sbjct: 86  SNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERIS 145

Query: 143 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVG 193
           ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSL+  A     G  GGG     G
Sbjct: 146 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAVVTGGGGGGGGRVLIGG 205

[Close]

BLAST of Sed0004269 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.9e-40
Identity = 100/172 (58.14%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 31  SRPFFMNNPPMEEPSALAQTPSFPSASSRWRNPMLSEAQKQR-------SVAAMREMIFR 90
           + PFF N      P         P  + R+     S   ++R       ++AAMREMIFR
Sbjct: 42  THPFFFNPTHSHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSDNANMAAMREMIFR 101

Query: 91  MAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 150
           +A MQPIHIDPESVKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 102 IAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 161

Query: 151 SMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCY 196
           SMLDEAIHYVKFLK QVQSL+  A        GGG ++  G  L  + G  Y
Sbjct: 162 SMLDEAIHYVKFLKKQVQSLEEHAV-----VNGGGMTAVAGGALAGTVGGGY 208

[Close]

BLAST of Sed0004269 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-31
Identity = 86/169 (50.89%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 3   NDHHLKSDDQMEIIMMMQQEFYSSYNDLSRPFFMNNPPMEEPSALAQTPSFPSASSRWRN 62
           +DHH + ++    + M Q      +N  S   F   PP+   S+L  T    +  S  + 
Sbjct: 30  DDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHF---PPLS--SSLTTT----TLLSGDQE 89

Query: 63  PMLSEAQKQRSVAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRER 122
               E +    + AM+EM++++AAMQ + IDP +VK PKRRNV+IS DPQSVAARHRRER
Sbjct: 90  DDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRER 149

Query: 123 ISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRP 172
           ISERIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P
Sbjct: 150 ISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189

[Close]

BLAST of Sed0004269 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29
Identity = 72/134 (53.73%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 73  SVAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 132
           ++A M+EMI+R AA +P++   E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 133 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSG 192
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++L+     + + T    SS+   FPL   S 
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRP-KLDQTNLSFSSAPTSFPLFHPS- 360

Query: 193 SCYVPMAKPSPMAH 207
             ++P+  P+ + H
Sbjct: 361 --FLPLQNPNQIHH 370

[Close]

BLAST of Sed0004269 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 69/126 (54.76%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 76  AMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVP 135
           AM+EM + +A MQP+ IDP +V  P RRNV+IS DPQ+V AR RRERISE+IRIL+R+VP
Sbjct: 87  AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146

Query: 136 GGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCY 195
           GG KMDTASMLDEAI Y KFLK QV+ LQ                S +G P+   S  CY
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ--------------PHSQIGAPMANPSYLCY 198

Query: 196 VPMAKP 202
              ++P
Sbjct: 207 YHNSQP 198

[Close]

BLAST of Sed0004269 vs. ExPASy TrEMBL
Match: A0A6J1IKS0 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 7.4e-65
Identity = 161/242 (66.53%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSYN-----------------------DLSR 60
           MEND  LKS+DQMEI+MMMQQ     EFY+  +                       + S 
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSS 60

Query: 61  PFFMNNPPMEEPSALAQTPSFPSASSRWRNP-MLSEAQKQRSVAAMREMIFRMAAMQPIH 120
           P F NN P   P    QT  FP+ SSRWRN    ++ QKQRSVAAMREMIFR+A MQPI 
Sbjct: 61  PPFTNNLPYNLP----QTVPFPT-SSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQ 120

Query: 121 IDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180
           IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH
Sbjct: 121 IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180

Query: 181 YVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHNVEQF 214
           YVKFLKTQVQSL+RAA NRP        +S VGFPLEMSSGS YVPMAKPS M HN+EQ+
Sbjct: 181 YVKFLKTQVQSLERAATNRPL-PDAAAPASGVGFPLEMSSGS-YVPMAKPSQMTHNLEQY 234

[Close]

BLAST of Sed0004269 vs. ExPASy TrEMBL
Match: A0A6J1FE54 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.1e-64
Identity = 160/246 (65.04%), Postives = 175/246 (71.14%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSYN-----------------------DLSR 60
           MEND  LKS+DQMEI+MMMQQ     EFY+  +                       + S 
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSS 60

Query: 61  PFFMNNPPMEEPSALAQTPSFPSASSRWRNP-MLSEAQKQRSVAAMREMIFRMAAMQPIH 120
           P F NN P   P    QT  FP+ SSRWRN    ++ QKQRSVAAMREMIFR+A MQPI 
Sbjct: 61  PPFTNNLPYNLP----QTVPFPT-SSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQ 120

Query: 121 IDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180
           IDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH
Sbjct: 121 IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 180

Query: 181 YVKFLKTQVQSLQRAAANRP----NGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSPMAHN 214
           YVKFLKTQVQSL+RAA NRP           ++  VGFPLEMSSGS YVPMAKPS M HN
Sbjct: 181 YVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGS-YVPMAKPSQMTHN 239

[Close]

BLAST of Sed0004269 vs. ExPASy TrEMBL
Match: A0A1S3BU58 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.3e-58
Identity = 151/238 (63.45%), Postives = 164/238 (68.91%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSY--------------------NDLSRPFF 60
           MEND  LKS+DQMEI+MMMQQ     EFY+ +                    +  S P F
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDNPHCHLDSSSSPPLF 60

Query: 61  M------NNPPMEEPSALAQTPSFPSAS-SRWRNPMLSEA---QKQRSVAAMREMIFRMA 120
           +      NNPP   P     T  FP  S SRWRN    E    QKQRSVAAMREMIFR+A
Sbjct: 61  INNNNSNNNPPYNFPQ--QSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFRIA 120

Query: 121 AMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM 180
            MQPIHIDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM
Sbjct: 121 VMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM 180

Query: 181 LDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCYVPMAKPSP 204
           LDEAIHYVKFLKTQVQSL+RAA +  N    GG + SVGFPLEMSSGS Y+P  +  P
Sbjct: 181 LDEAIHYVKFLKTQVQSLERAAVSTGNRPITGGGAPSVGFPLEMSSGS-YIPNHQSQP 234

[Close]

BLAST of Sed0004269 vs. ExPASy TrEMBL
Match: A0A0A0L0B3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.5e-57
Identity = 152/237 (64.14%), Postives = 166/237 (70.04%), Query Frame = 0


Query: 1   MENDHHLKSDDQMEIIMMMQQ-----EFYSSY--------------------NDLSRPFF 60
           MEND  LKS+DQMEI+MMMQQ     EFY+ +                    +  S P F
Sbjct: 1   MEND-DLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHCHLDSSSSPPLF 60

Query: 61  M--------NNPPMEEPSALAQTPSFP-SASSRWRNPMLSEA---QKQRSVAAMREMIFR 120
           +        NNPP   P     T  FP ++SSRWRN    E    QKQRSVAAMREMIFR
Sbjct: 61  INNNSNNNSNNPPYNFPQ--QSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFR 120

Query: 121 MAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180
           +A MQPIHIDPE+VKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 121 IAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180

Query: 181 SMLDEAIHYVKFLKTQVQSLQRA---AANRPNGTRGGGSSSSVGFPLEMSSGSCYVP 198
           SMLDEAIHYVKFLKTQVQSL+RA   A NRP    G G+ SSVGFPLEMS+GS Y+P
Sbjct: 181 SMLDEAIHYVKFLKTQVQSLERAAVSAGNRP--ITGVGAPSSVGFPLEMSTGS-YIP 231

[Close]

BLAST of Sed0004269 vs. ExPASy TrEMBL
Match: A0A1R3I8N8 (BHLH domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14015 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.1e-55
Identity = 139/258 (53.88%), Postives = 167/258 (64.73%), Query Frame = 0


Query: 9   SDDQMEIIMMMQQ----EFYSSYNDL--------------------SRPFFMNNP----- 68
           ++DQME++MMMQ     EF+ +YND+                    + P F+  P     
Sbjct: 10  TEDQMEMMMMMQMDKLPEFFGAYNDVVELPPAEAELSPGASNNNTSAMPHFVETPPFINH 69

Query: 69  ----------PMEEPSALAQTP-----SFPSASSRWR---------NPMLSEAQKQRSVA 128
                     P++EP   A        S P  S+RWR         N   + +QK+ S+A
Sbjct: 70  LPTISFNGSTPVQEPGGAAAAVAAGFLSSPGGSARWRGGAGELSGANAFSTPSQKKNSMA 129

Query: 129 AMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVP 188
           AMREMIFR+AAMQPIHIDPES+KPPKRRNVKIS DPQSVAARHRRERISERIRILQRLVP
Sbjct: 130 AMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVP 189

Query: 189 GGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCY 214
           GGTKMDTASMLDEAIHYVKFLKTQVQSL+RAAANRP       +++ +GFP+ MS+GS +
Sbjct: 190 GGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP-------TTTGLGFPVAMSNGSTF 249

[Close]

BLAST of Sed0004269 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 167.9 bits (424), Expect = 8.7e-42
Identity = 101/188 (53.72%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 23  FYSSYNDLSRPFFMNNPPMEEPSALAQTPSFPSASSRWRNPM------------------ 82
           F+S  ++ + PF  N+   +   ++   P F   S    NP                   
Sbjct: 26  FFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLTNPSSISPNTAYSSVFLDKRNN 85

Query: 83  LSEAQKQRSVAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERIS 142
            +      ++AAMREMIFR+A MQPIHIDPE+VKPPKRRNV+IS DPQSVAARHRRERIS
Sbjct: 86  SNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERIS 145

Query: 143 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVG 193
           ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSL+  A     G  GGG     G
Sbjct: 146 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAVVTGGGGGGGGRVLIGG 205

[Close]

BLAST of Sed0004269 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 5.6e-41
Identity = 100/172 (58.14%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 31  SRPFFMNNPPMEEPSALAQTPSFPSASSRWRNPMLSEAQKQR-------SVAAMREMIFR 90
           + PFF N      P         P  + R+     S   ++R       ++AAMREMIFR
Sbjct: 42  THPFFFNPTHSHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSDNANMAAMREMIFR 101

Query: 91  MAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 150
           +A MQPIHIDPESVKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 102 IAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 161

Query: 151 SMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCY 196
           SMLDEAIHYVKFLK QVQSL+  A        GGG ++  G  L  + G  Y
Sbjct: 162 SMLDEAIHYVKFLKKQVQSLEEHAV-----VNGGGMTAVAGGALAGTVGGGY 208

[Close]

BLAST of Sed0004269 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-32
Identity = 86/169 (50.89%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 3   NDHHLKSDDQMEIIMMMQQEFYSSYNDLSRPFFMNNPPMEEPSALAQTPSFPSASSRWRN 62
           +DHH + ++    + M Q      +N  S   F   PP+   S+L  T    +  S  + 
Sbjct: 30  DDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHF---PPLS--SSLTTT----TLLSGDQE 89

Query: 63  PMLSEAQKQRSVAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRER 122
               E +    + AM+EM++++AAMQ + IDP +VK PKRRNV+IS DPQSVAARHRRER
Sbjct: 90  DDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRER 149

Query: 123 ISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRP 172
           ISERIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P
Sbjct: 150 ISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189

[Close]

BLAST of Sed0004269 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-30
Identity = 72/134 (53.73%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 73  SVAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 132
           ++A M+EMI+R AA +P++   E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 133 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSG 192
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++L+     + + T    SS+   FPL   S 
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRP-KLDQTNLSFSSAPTSFPLFHPS- 360

Query: 193 SCYVPMAKPSPMAH 207
             ++P+  P+ + H
Sbjct: 361 --FLPLQNPNQIHH 370

[Close]

BLAST of Sed0004269 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 69/126 (54.76%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 76  AMREMIFRMAAMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVP 135
           AM+EM + +A MQP+ IDP +V  P RRNV+IS DPQ+V AR RRERISE+IRIL+R+VP
Sbjct: 87  AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146

Query: 136 GGTKMDTASMLDEAIHYVKFLKTQVQSLQRAAANRPNGTRGGGSSSSVGFPLEMSSGSCY 195
           GG KMDTASMLDEAI Y KFLK QV+ LQ                S +G P+   S  CY
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ--------------PHSQIGAPMANPSYLCY 198

Query: 196 VPMAKP 202
              ++P
Sbjct: 207 YHNSQP 198

The following BLAST results are available for this feature:

BLAST of Sed0004269 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536625.1	6.2e-66	66.53	transcription factor HEC2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975973.1	1.5e-64	66.53	transcription factor HEC2-like [Cucurbita maxima]	[more]
KAG7025068.1	2.0e-64	65.84	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936595.1	4.4e-64	65.04	transcription factor HEC2-like [Cucurbita moschata]	[more]
KAG6591384.1	9.3e-62	65.52	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0004269 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA7	1.2e-40	53.72	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	7.9e-40	58.14	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	6.7e-31	50.89	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q8S3D2	4.8e-29	53.73	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
O81313	2.0e-27	54.76	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]

BLAST of Sed0004269 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKS0	7.4e-65	66.53	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 ...	[more]
A0A6J1FE54	2.1e-64	65.04	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=...	[more]
A0A1S3BU58	1.3e-58	63.45	transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1	[more]
A0A0A0L0B3	2.5e-57	64.14	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 S...	[more]
A0A1R3I8N8	1.1e-55	53.88	BHLH domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_1401...	[more]

BLAST of Sed0004269 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67060.1	8.7e-42	53.72	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	5.6e-41	58.14	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	4.8e-32	50.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	3.4e-30	53.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	1.4e-28	54.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 113..162 e-value: 1.4E-13 score: 61.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 117..156 e-value: 1.3E-6 score: 28.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 107..156 score: 15.217952
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 110..173 e-value: 2.0E-12 score: 49.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 112..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..119
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 37..200
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 37..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004269.1	Sed0004269.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity