Sed0004265 (gene) Chayote v1

Overview


Name	Sed0004265
Type	gene
Organism	Sechium edule (Chayote v1)
Description	hydroxyproline-rich glycoprotein family protein
Location	LG04: 44739632 .. 44740419 (+)
RNA-Seq Expression	Sed0004265
Synteny	Sed0004265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCAAGATCATCAAAGCACGCCGGCCAAATGGAAAACCCTCCGCCGCATATCACCGTCGAGGACGCCGCCGGCGAAAATCCATCCACCGAATATCCCATCCATCCGCCGCACACCACCGTCGAGACCGCCATCGGCGAAACTCCAACCCCCAAACCCCCACCCCCTCCACCGGAGAACACCATGGAGAGCAGCGCCGGCGAAGATCCAACTCCGAAACCCCCAAGCCCTCCTCCGGAAAACACCGCGGAAAGCGACGCCGGCGACAACCCAACCCTGAAACCTGGGCCGCGACGACGGACCAAGCGGCCGTACCCGTGGTCCAGAAAACGAGGAGCCAGAATCCAGAGCCTAACCCACCTCCAATCGAACCACTTCGACGTCATAACCGGCGACGTGAAATGCACCAAATGCGACCAAGAGTACAAACTCGGGCTCGATCTGGCCACCAAATTCGACAGGATTTCAACCTTCATAGCACAGAACAAGCCCGATTGGCGAAACAGAGCTCCAAGTTCATGGGCGTTCCCTGTTTTGCTCCATTGCAATTTCTGCAAGCAACGAAACTGCGTCAAGCCGGTGATCCACTGGAAGGATCACAAGAACATCAATTGGCTGTTCTTGTTTTTGGGGCAATTGCTTGGACGGTTGACTCTTGGACAGATCAAATATTTCTGTGTTCATAACAAGATTTCTCTAACTAGCCGCCCCAAGAATTGCCTTCTTTATCACACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAATCCACTCTTTGATCCTTGA

mRNA sequence

TTCCAAGATCATCAAAGCACGCCGGCCAAATGGAAAACCCTCCGCCGCATATCACCGTCGAGGACGCCGCCGGCGAAAATCCATCCACCGAATATCCCATCCATCCGCCGCACACCACCGTCGAGACCGCCATCGGCGAAACTCCAACCCCCAAACCCCCACCCCCTCCACCGGAGAACACCATGGAGAGCAGCGCCGGCGAAGATCCAACTCCGAAACCCCCAAGCCCTCCTCCGGAAAACACCGCGGAAAGCGACGCCGGCGACAACCCAACCCTGAAACCTGGGCCGCGACGACGGACCAAGCGGCCGTACCCGTGGTCCAGAAAACGAGGAGCCAGAATCCAGAGCCTAACCCACCTCCAATCGAACCACTTCGACGTCATAACCGGCGACGTGAAATGCACCAAATGCGACCAAGAGTACAAACTCGGGCTCGATCTGGCCACCAAATTCGACAGGATTTCAACCTTCATAGCACAGAACAAGCCCGATTGGCGAAACAGAGCTCCAAGTTCATGGGCGTTCCCTGTTTTGCTCCATTGCAATTTCTGCAAGCAACGAAACTGCGTCAAGCCGGTGATCCACTGGAAGGATCACAAGAACATCAATTGGCTGTTCTTGTTTTTGGGGCAATTGCTTGGACGGTTGACTCTTGGACAGATCAAATATTTCTGTGTTCATAACAAGATTTCTCTAACTAGCCGCCCCAAGAATTGCCTTCTTTATCACACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAATCCACTCTTTGATCCTTGA

Coding sequence (CDS)

ATGGAAAACCCTCCGCCGCATATCACCGTCGAGGACGCCGCCGGCGAAAATCCATCCACCGAATATCCCATCCATCCGCCGCACACCACCGTCGAGACCGCCATCGGCGAAACTCCAACCCCCAAACCCCCACCCCCTCCACCGGAGAACACCATGGAGAGCAGCGCCGGCGAAGATCCAACTCCGAAACCCCCAAGCCCTCCTCCGGAAAACACCGCGGAAAGCGACGCCGGCGACAACCCAACCCTGAAACCTGGGCCGCGACGACGGACCAAGCGGCCGTACCCGTGGTCCAGAAAACGAGGAGCCAGAATCCAGAGCCTAACCCACCTCCAATCGAACCACTTCGACGTCATAACCGGCGACGTGAAATGCACCAAATGCGACCAAGAGTACAAACTCGGGCTCGATCTGGCCACCAAATTCGACAGGATTTCAACCTTCATAGCACAGAACAAGCCCGATTGGCGAAACAGAGCTCCAAGTTCATGGGCGTTCCCTGTTTTGCTCCATTGCAATTTCTGCAAGCAACGAAACTGCGTCAAGCCGGTGATCCACTGGAAGGATCACAAGAACATCAATTGGCTGTTCTTGTTTTTGGGGCAATTGCTTGGACGGTTGACTCTTGGACAGATCAAATATTTCTGTGTTCATAACAAGATTTCTCTAACTAGCCGCCCCAAGAATTGCCTTCTTTATCACACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAATCCACTCTTTGATCCTTGA

Protein sequence

MENPPPHITVEDAAGENPSTEYPIHPPHTTVETAIGETPTPKPPPPPPENTMESSAGEDPTPKPPSPPPENTAESDAGDNPTLKPGPRRRTKRPYPWSRKRGARIQSLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLALCKQLQPSNPLFDP

Homology

[Close]

BLAST of Sed0004265 vs. NCBI nr
Match: XP_022135937.1 (uncharacterized protein LOC111007768 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 3.4e-39
Identity = 80/159 (50.31%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 92  KRPYPWSRKRGARIQSLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQ 151
           K PYPWS +  A +  L +L+ N    ITGDV+C +C+++Y +  DL TKF+ I++FI +
Sbjct: 123 KPPYPWSTEHQAVVHDLNYLRENQILTITGDVRCDRCEKQYTIEYDLMTKFEEIASFIEK 182

Query: 152 NKPDWRNRAPSSWAFPVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQ 211
           NK    +RAP SW  P  L C  C + NCV+P I   D+KNINWLFL LGQ++GRL L  
Sbjct: 183 NKATLHDRAPESWTNPNFLDCKLCGEENCVRPTIPEGDNKNINWLFLLLGQMIGRLKLEH 242

Query: 212 IKYFCVHNKISLTSRPKNCLLYHTYLALCKQLQPSNPLF 251
           +KYFC +     T   KN L+Y TYL LCKQLQPS  LF
Sbjct: 243 LKYFCAYTNNHRTG-AKNRLVYLTYLTLCKQLQPSMELF 280

[Close]

BLAST of Sed0004265 vs. NCBI nr
Match: XP_015084832.1 (uncharacterized protein LOC107028319 [Solanum pennellii])

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-37
Identity = 92/227 (40.53%), Postives = 129/227 (56.83%), Query Frame = 0


Query: 28  HTTVETAIGETPTPKPPPPPPENTMESSAGEDPTPKPPSPPPENTAESDAGDNPTLKPGP 87
           H+ +  ++  +P+P   PPPP               PP PPP           P+ +P  
Sbjct: 10  HSLLTLSLSFSPSPVVAPPPP---------------PPPPPP-----------PSRRPRK 69

Query: 88  RRRTKR------PYPWSRKRGARIQSLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATK 147
           R+RT +      PYPW+    A+I SL  L+ N    ITG+V+C +C+++Y++G DL  K
Sbjct: 70  RKRTLKSETIPAPYPWATNHRAKIHSLNVLRLNQISTITGEVQCRRCERKYEIGFDLCDK 129

Query: 148 FDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLG 207
           F ++ +FI+ NK     RAP  W  P+ L+CNFC+Q N VKP+I  K  K+INW FL LG
Sbjct: 130 FAQVGSFISANKESMHQRAPDIWMSPIYLNCNFCEQENSVKPIISSK-KKSINWAFLLLG 189

Query: 208 QLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLALCKQLQPSNP 249
           Q +G  TL Q+KYFC HN+I  T   K+ +LY TYL LC+QL  + P
Sbjct: 190 QFIGFCTLDQLKYFCKHNEIHRTG-AKDRVLYQTYLCLCRQLDNTGP 208

[Close]

BLAST of Sed0004265 vs. NCBI nr
Match: XP_004246107.1 (uncharacterized protein LOC101258478 [Solanum lycopersicum])

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-37
Identity = 92/227 (40.53%), Postives = 130/227 (57.27%), Query Frame = 0


Query: 28  HTTVETAIGETPTPKPPPPPPENTMESSAGEDPTPKPPSPPPENTAESDAGDNPTLKPGP 87
           H+ +  ++  +P+P   PPPP               PP PPP           P+ +P  
Sbjct: 10  HSLLTLSLSFSPSPVVAPPPP---------------PPPPPP-----------PSRRPRK 69

Query: 88  RRRTKR------PYPWSRKRGARIQSLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATK 147
           R+RT +      PYPW+    A+I SL  L+ N    ITG+V+C +C+++Y++G DL  K
Sbjct: 70  RKRTLKSETIPAPYPWATNHRAKIHSLNVLRLNQISTITGEVQCRRCERKYEIGFDLCDK 129

Query: 148 FDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLG 207
           F ++ +FI+ NK     RAP  W  P+ L+CNFC+Q N VKP+I  K  K+INW+FL LG
Sbjct: 130 FAQVGSFISANKESMHQRAPDIWMSPMYLNCNFCEQENSVKPIISSK-KKSINWVFLLLG 189

Query: 208 QLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLALCKQLQPSNP 249
           Q +G  TL Q+KYFC HN+I  T   K+ +LY TYL LC+QL  + P
Sbjct: 190 QFIGFCTLDQLKYFCKHNEIHRTG-AKDRVLYQTYLCLCRQLDNTGP 208

[Close]

BLAST of Sed0004265 vs. NCBI nr
Match: PPD69681.1 (hypothetical protein GOBAR_DD33434 [Gossypium barbadense])

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-37
Identity = 95/202 (47.03%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 49  ENTMESSAGEDPTPKPPSPPPENTAESDAGDNPT--LKPGPRRRTKRPYPWSRKRGARIQ 108
           E T  ++ G+D T   PSP P  +       N T  L+ G       PYPW+    A + 
Sbjct: 16  EFTGFNNGGDDVTVPVPSPGPGPSRPIRVRRNSTKALREGQSETVPPPYPWATSHRATVH 75

Query: 109 SLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAF 168
           +L +L S     ITGDV+C +C+++Y++G DL TKF  I+T+IAQNK    +RAPS W  
Sbjct: 76  TLNYLLSIPIPTITGDVQCKRCERQYEMGYDLKTKFTEIATYIAQNKESMHDRAPSVWRN 135

Query: 169 PVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKISLTSR 228
           PVL  C FC Q N  KPVI  K  K+INWLFL LGQ+LG  TL Q+KYFC H K   T  
Sbjct: 136 PVLPKCKFCDQENSAKPVISDK-KKSINWLFLLLGQVLGCCTLEQLKYFCKHTKNHRTG- 195

Query: 229 PKNCLLYHTYLALCKQLQPSNP 249
            K+ +LY TYL LCKQL P+ P
Sbjct: 196 AKDRVLYLTYLGLCKQLDPNGP 215

[Close]

BLAST of Sed0004265 vs. NCBI nr
Match: KAB2087956.1 (hypothetical protein ES319_A04G141000v1 [Gossypium barbadense])

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-37
Identity = 91/190 (47.89%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 60  PTPKP-PSPPPENTAESDAGDNPTLKPGPRRRTKRPYPWSRKRGARIQSLTHLQSNHFDV 119
           P P P P P P             L+ G       PYPW+    A + +L +L S     
Sbjct: 82  PVPVPSPGPGPSRPIRVRRNTTKALREGQSETVPPPYPWATSHRATVHTLNYLLSIPIPT 141

Query: 120 ITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQR 179
           ITGDV+C +C+++Y++G DL TKF  I+T+IAQNK    +RAPS W  PVL  C FC Q 
Sbjct: 142 ITGDVQCKRCERQYEMGYDLKTKFTEIATYIAQNKESMHDRAPSVWRNPVLPKCKFCDQE 201

Query: 180 NCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLA 239
           N  KPVI  K  K+INWLFL LGQLLG  TL Q+KYFC H K   T   K+ +LY TYL 
Sbjct: 202 NSAKPVISDK-KKSINWLFLLLGQLLGCCTLEQLKYFCKHTKNHRTG-AKDRVLYLTYLG 261

Query: 240 LCKQLQPSNP 249
           LCKQL P+ P
Sbjct: 262 LCKQLDPNGP 269

[Close]

BLAST of Sed0004265 vs. ExPASy TrEMBL
Match: A0A6J1C462 (uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007768 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39
Identity = 80/159 (50.31%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 92  KRPYPWSRKRGARIQSLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQ 151
           K PYPWS +  A +  L +L+ N    ITGDV+C +C+++Y +  DL TKF+ I++FI +
Sbjct: 123 KPPYPWSTEHQAVVHDLNYLRENQILTITGDVRCDRCEKQYTIEYDLMTKFEEIASFIEK 182

Query: 152 NKPDWRNRAPSSWAFPVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQ 211
           NK    +RAP SW  P  L C  C + NCV+P I   D+KNINWLFL LGQ++GRL L  
Sbjct: 183 NKATLHDRAPESWTNPNFLDCKLCGEENCVRPTIPEGDNKNINWLFLLLGQMIGRLKLEH 242

Query: 212 IKYFCVHNKISLTSRPKNCLLYHTYLALCKQLQPSNPLF 251
           +KYFC +     T   KN L+Y TYL LCKQLQPS  LF
Sbjct: 243 LKYFCAYTNNHRTG-AKNRLVYLTYLTLCKQLQPSMELF 280

[Close]

BLAST of Sed0004265 vs. ExPASy TrEMBL
Match: A0A3Q7HWE7 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101258478 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-38
Identity = 92/227 (40.53%), Postives = 130/227 (57.27%), Query Frame = 0


Query: 28  HTTVETAIGETPTPKPPPPPPENTMESSAGEDPTPKPPSPPPENTAESDAGDNPTLKPGP 87
           H+ +  ++  +P+P   PPPP               PP PPP           P+ +P  
Sbjct: 10  HSLLTLSLSFSPSPVVAPPPP---------------PPPPPP-----------PSRRPRK 69

Query: 88  RRRTKR------PYPWSRKRGARIQSLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATK 147
           R+RT +      PYPW+    A+I SL  L+ N    ITG+V+C +C+++Y++G DL  K
Sbjct: 70  RKRTLKSETIPAPYPWATNHRAKIHSLNVLRLNQISTITGEVQCRRCERKYEIGFDLCDK 129

Query: 148 FDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLG 207
           F ++ +FI+ NK     RAP  W  P+ L+CNFC+Q N VKP+I  K  K+INW+FL LG
Sbjct: 130 FAQVGSFISANKESMHQRAPDIWMSPMYLNCNFCEQENSVKPIISSK-KKSINWVFLLLG 189

Query: 208 QLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLALCKQLQPSNP 249
           Q +G  TL Q+KYFC HN+I  T   K+ +LY TYL LC+QL  + P
Sbjct: 190 QFIGFCTLDQLKYFCKHNEIHRTG-AKDRVLYQTYLCLCRQLDNTGP 208

[Close]

BLAST of Sed0004265 vs. ExPASy TrEMBL
Match: A0A5J5W9K1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A04G141000v1 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.9e-38
Identity = 91/190 (47.89%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 60  PTPKP-PSPPPENTAESDAGDNPTLKPGPRRRTKRPYPWSRKRGARIQSLTHLQSNHFDV 119
           P P P P P P             L+ G       PYPW+    A + +L +L S     
Sbjct: 82  PVPVPSPGPGPSRPIRVRRNTTKALREGQSETVPPPYPWATSHRATVHTLNYLLSIPIPT 141

Query: 120 ITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQR 179
           ITGDV+C +C+++Y++G DL TKF  I+T+IAQNK    +RAPS W  PVL  C FC Q 
Sbjct: 142 ITGDVQCKRCERQYEMGYDLKTKFTEIATYIAQNKESMHDRAPSVWRNPVLPKCKFCDQE 201

Query: 180 NCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLA 239
           N  KPVI  K  K+INWLFL LGQLLG  TL Q+KYFC H K   T   K+ +LY TYL 
Sbjct: 202 NSAKPVISDK-KKSINWLFLLLGQLLGCCTLEQLKYFCKHTKNHRTG-AKDRVLYLTYLG 261

Query: 240 LCKQLQPSNP 249
           LCKQL P+ P
Sbjct: 262 LCKQLDPNGP 269

[Close]

BLAST of Sed0004265 vs. ExPASy TrEMBL
Match: A0A6P4M137 (uncharacterized protein LOC108458545 OS=Gossypium arboreum OX=29729 GN=LOC108458545 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 9.1e-38
Identity = 91/190 (47.89%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 60  PTPKP-PSPPPENTAESDAGDNPTLKPGPRRRTKRPYPWSRKRGARIQSLTHLQSNHFDV 119
           P P P P P P             L+ G       PYPW+    A + +L +L S     
Sbjct: 131 PVPVPSPGPGPSRPIRVRRNTTNALREGQSETVPPPYPWATSHRATVHTLNYLLSIPIPT 190

Query: 120 ITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQR 179
           ITGDV+C +C+++Y++G DL TKF  I+T+IAQNK    +RAPS W  PVL  C FC Q 
Sbjct: 191 ITGDVQCKRCERQYEMGYDLKTKFTEIATYIAQNKESMHDRAPSVWRNPVLPKCKFCDQE 250

Query: 180 NCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLA 239
           N  KPVI  K  K+INWLFL LGQLLG  TL Q+KYFC H K   T   K+ +LY TYL 
Sbjct: 251 NSAKPVISDK-KKSINWLFLLLGQLLGCCTLEQLKYFCKHTKNHRTG-AKDRVLYLTYLG 310

Query: 240 LCKQLQPSNP 249
           LCKQL P+ P
Sbjct: 311 LCKQLDPNGP 318

[Close]

BLAST of Sed0004265 vs. ExPASy TrEMBL
Match: A0A1U8NI96 (uncharacterized protein LOC107947419 OS=Gossypium hirsutum OX=3635 GN=LOC107947419 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 9.1e-38
Identity = 91/190 (47.89%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 60  PTPKP-PSPPPENTAESDAGDNPTLKPGPRRRTKRPYPWSRKRGARIQSLTHLQSNHFDV 119
           P P P P P P             L+ G       PYPW+    A + +L +L S     
Sbjct: 133 PVPVPCPGPGPSRPIRVRRNTTNALREGQSETVPPPYPWATSHRATVHTLNYLLSIPIPT 192

Query: 120 ITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAFPVLLHCNFCKQR 179
           ITGDV+C +C+++Y++G DL TKF  I+T+IAQNK    +RAPS W  PVL  C FC Q 
Sbjct: 193 ITGDVQCKRCERQYEMGYDLKTKFTEIATYIAQNKESMHDRAPSVWRNPVLPKCKFCDQE 252

Query: 180 NCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKISLTSRPKNCLLYHTYLA 239
           N  KPVI  K  K+INWLFL LGQLLG  TL Q+KYFC H K   T   K+ +LY TYL 
Sbjct: 253 NSAKPVISDK-KKSINWLFLLLGQLLGCCTLEQLKYFCKHTKNHRTG-AKDRVLYLTYLG 312

Query: 240 LCKQLQPSNP 249
           LCKQL P+ P
Sbjct: 313 LCKQLDPNGP 320

[Close]

BLAST of Sed0004265 vs. TAIR 10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 8.1e-31
Identity = 94/259 (36.29%), Postives = 132/259 (50.97%), Query Frame = 0


Query: 4   PPPHITVEDAAGEN------PSTEYPIHPPHTTVETAIGETPTPKPPPPPPENTMESSAG 63
           P P+     A G N       + E  + PP+ +V T +   P+ +  PPP  N + + A 
Sbjct: 55  PQPNDMTSFANGTNHVIVPTQALEQAVPPPNVSVRTPLPYQPSEEVLPPPQLNQVATVAL 114

Query: 64  EDP-TPKPP-------SPPPENTAESDAGDNPTLKPGPRRRTKRPYPWSRKRGARIQSLT 123
             P   +PP       S  P    E + GD         R    PYPW+ K+  +IQS  
Sbjct: 115 ATPRRGRPPGGQARRNSKRPVAGVERNVGD---------REIVPPYPWATKKPGKIQSFR 174

Query: 124 HLQSNHFDVITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAFPVL 183
            L SN+ +VI+G V C  CD+   +  +L  KF  +  +I  NK + R+RAP SW+ P L
Sbjct: 175 DLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKL 234

Query: 184 LHCNFCKQRNCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKISLTSRPKN 243
           + C  CK    +KPV+  +  + INWLFL LGQ+LG  TL Q++YFC  N    T   K+
Sbjct: 235 IPCRTCKSE--MKPVMS-ERKEEINWLFLLLGQMLGCCTLDQLRYFCQLNSKHRTG-SKD 294

Query: 244 CLLYHTYLALCKQLQPSNP 249
            ++Y TYL+LCKQL P  P
Sbjct: 295 RVVYITYLSLCKQLDPEGP 300

[Close]

BLAST of Sed0004265 vs. TAIR 10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-28
Identity = 91/269 (33.83%), Postives = 121/269 (44.98%), Query Frame = 0


Query: 4   PPPHITVEDAAGENPSTEYPIHPPHTTVETAIGETPTPKPPPPPPENTMESSAGEDPTPK 63
           PPP           P T +P     T  +     +  P PPPP  +  +  S     TP 
Sbjct: 70  PPPEF-------PGPVTTWP-----TPADFLATRSMVPDPPPPSHQIPLWMSNYFQQTPN 129

Query: 64  PPSP-----PPENTAESDAGDNPTLKPGPRRRTKR-----------------PYPWSRKR 123
           PP       PP   A   +   P     P   + R                 P+PW+  R
Sbjct: 130 PPQLVTHFFPPSGLAPPSSNLTPPPVKRPVTGSVRIYRSRSTVSKKSDTISPPFPWATNR 189

Query: 124 GARIQSLTHLQSNHFDVITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAP 183
              IQSL +L+SN    ITG+V+C  C++ Y++  +L  +F  +  F    K   R+RA 
Sbjct: 190 RGEIQSLEYLESNQITTITGEVQCRHCEKVYQVSYNLRERFAEVVKFYLTEKRKMRDRAH 249

Query: 184 SSWAFPVLLHCNFCKQRNCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQIKYFCVHNKI 243
             WA+P    C  C +   VKPVI  +    INWLFL LGQ LG  TL Q+K FC H+K 
Sbjct: 250 KDWAYPEQRRCELCGREKAVKPVIA-ERKSQINWLFLLLGQTLGFCTLEQLKNFCKHSKN 309

Query: 244 SLTSRPKNCLLYHTYLALCKQLQPSNPLF 251
             T   K+ +LY TY+ LCK LQP + LF
Sbjct: 310 HRTG-AKDRVLYLTYMGLCKMLQPKSDLF 324

[Close]

BLAST of Sed0004265 vs. TAIR 10
Match: AT2G16190.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-21
Identity = 77/223 (34.53%), Postives = 110/223 (49.33%), Query Frame = 0


Query: 4   PPPHITVEDAAGEN------PSTEYPIHPPHTTVETAIGETPTPKPPPPPPENTMESSAG 63
           P P+     A G N       + E  + PP+ +V T +   P+ +  PPP  N + + A 
Sbjct: 55  PQPNDMTSFANGTNHVIVPTQALEQAVPPPNVSVRTPLPYQPSEEVLPPPQLNQVATVAL 114

Query: 64  EDP-TPKPP-------SPPPENTAESDAGDNPTLKPGPRRRTKRPYPWSRKRGARIQSLT 123
             P   +PP       S  P    E + GD         R    PYPW+ K+  +IQS  
Sbjct: 115 ATPRRGRPPGGQARRNSKRPVAGVERNVGD---------REIVPPYPWATKKPGKIQSFR 174

Query: 124 HLQSNHFDVITGDVKCTKCDQEYKLGLDLATKFDRISTFIAQNKPDWRNRAPSSWAFPVL 183
            L SN+ +VI+G V C  CD+   +  +L  KF  +  +I  NK + R+RAP SW+ P L
Sbjct: 175 DLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKL 234

Query: 184 LHCNFCKQRNCVKPVIHWKDHKNINWLFLFLGQLLGRLTLGQI 213
           + C  CK    +KPV+  +  + INWLFL LGQ+LG  TL Q+
Sbjct: 235 IPCRTCKSE--MKPVMS-ERKEEINWLFLLLGQMLGCCTLDQL 265

The following BLAST results are available for this feature:

BLAST of Sed0004265 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135937.1	3.4e-39	50.31	uncharacterized protein LOC111007768 [Momordica charantia]	[more]
XP_015084832.1	1.1e-37	40.53	uncharacterized protein LOC107028319 [Solanum pennellii]	[more]
XP_004246107.1	1.1e-37	40.53	uncharacterized protein LOC101258478 [Solanum lycopersicum]	[more]
PPD69681.1	1.4e-37	47.03	hypothetical protein GOBAR_DD33434 [Gossypium barbadense]	[more]
KAB2087956.1	1.4e-37	47.89	hypothetical protein ES319_A04G141000v1 [Gossypium barbadense]	[more]

BLAST of Sed0004265 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0004265 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C462	1.7e-39	50.31	uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A3Q7HWE7	5.3e-38	40.53	Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101258478 PE=4 SV=1	[more]
A0A5J5W9K1	6.9e-38	47.89	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A04G141000v1 PE...	[more]
A0A6P4M137	9.1e-38	47.89	uncharacterized protein LOC108458545 OS=Gossypium arboreum OX=29729 GN=LOC108458...	[more]
A0A1U8NI96	9.1e-38	47.89	uncharacterized protein LOC107947419 OS=Gossypium hirsutum OX=3635 GN=LOC1079474...	[more]

BLAST of Sed0004265 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16190.1	8.1e-31	36.29	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein fam...	[more]
AT1G49330.1	2.2e-28	33.83	hydroxyproline-rich glycoprotein family protein	[more]
AT2G16190.2	1.2e-21	34.53	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..106
None	No IPR available	PANTHER	PTHR34272	EXPRESSED PROTEIN	coord: 27..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004265.1	Sed0004265.1	mRNA