Sed0004245 (gene) Chayote v1

Overview


Name	Sed0004245
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	LG11: 35633401 .. 35639805 (+)
RNA-Seq Expression	Sed0004245
Synteny	Sed0004245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAATTCCACTCCCCAATTCTCTAATCCGTTCTTAATCTCATTGTCTTCCCCCACTTCCGAGAATAGTAATTTCCGAATTCTTTTATAAATCGGTAATTTTTTTTTTCTTCAGTAATTGGGAAGGTTGGTGGGTTCTCAGTAATTTCTTCAAAGAGGTTCGTTTTGCAGAGATTAGCCATGAATTCTGGAGATCCATCAATGGCGTTACTGGCTGCAAGTGCTGGAGATACTGTGAAATTATTTGATGTCTCTGTTCATTCCAACGATCTGGGCGATCCGTGCACTTTGAGCTACACTCCTTCGCCGGGTTTTCAAGTCAATTCAGTGAAGTGGAATCATACAAGTGAGTTGTTTACATTCTTTTTCTCCCCTTTCAATTACCCTTTATTGGGTTTTTGTTTTAGATTTTTTTTTATAGGTGGGGTTGGTTTATTTTGCTACATTTCTTCTATTCTCAGCATTTTTTTTGGGTAATGCATTTGTGTTTTTGTAGAAATGGAAGTTTGTTTTGGTATGAGTTTAAATTTTGCTATCATATTTTGGATTTTTCTGCTATTTACTGGTTGGTAAGTTTGATATTTTAGTACTCCGATGCTGGTTCTGTTTTCTGTTGATTTAATCGGGATTTTATTTTTGCAGATTTGGTTGTGGCTAGTGCCGGAGATGATAAGAAGATCTCCTTGTGGCGTAAGAATGGTCAGAGCATGGGCACCATTCCAATTGCTGGTAGTGATAGTGGAGATAACATAGAGGTCAGTTGGTTGTTTAATGCAGTGGTAGCATCTTTGTTATTTCGTTTTTTTGGATACTAGGATTTAGAAGAACTGAAGGGAGTGTTTTCTTTTAAACCCTTAGTGTTTAGACCAGCACGCGCACCTTGATTATTCACAGGGGATAACCCGCACGACCCAACAACATTTGGGTTAAATAAACCCATAAGAAATTAATTTTTAGGTAGATGGTCATCATGGATCAAACCTGGTTCCTTAAGGCCCTCTGGACCATTAGTCCAACGAATGATGGTTAGCTCAAGGGAATGTTGGGATGTGTTTTGAATTTTCATAATGGTCGAGTAATTTGTTTCTGAACATAACATCCGTTAATGCTGTAGTTTATTTTAGTTCTGAATGATGTATGTCAAGTGATGATTCATTGTTTAGTTTATTTATGGCTAAATGTTTATACAGGAATCCATATATTCTATAAGTTTCAGCAACAAGGTATCGAGGTATATGTGTACTGGAGGGAGTGGCCATGTTGTAAGAATATGGGACTTGCAGAGAAAACGGTGTATAAAATGGCTGAGAGGACATAGCAACACTATAACTGGAGCTATGTACAATTGCAAAGATGAGCACCTTGCTTCAATCAGTCTTAGTGGTGATCTTTTACTTCACAATCTTGCATCTGGTGCAAGGACTGCCGAACTTAAAGACCCCAATGAACAGGTTGTCAAAGTATATTGCATCTTAGTTCACTTTTGAGGTTTGAAACAGATGATCTGATTTTCAATTAAATGTCCTTTCTGATGGCTGTTAAGACCAGGTATTGAGGGTGCTCGACTATTCTCGTATGAGCAGACACCTTTTGGCAACTGCAGGTGATGATGGAACTGTACATCTATGGGATACCACTGGCCGCAATCCTAAGGTTGAGCTGACTATCTTGTTGTAGAAATACATGGCTTATAACTTATCCTTAAAGTATAAAGGATTGCTACGGGTGGATATTTTTTGTGGCCTTTATAATACTCGCATCTTTCATGTTTTAAGACATTTGAATGCCTTTGTTTCCACTGTAAGTCACTAATAATGATGAATATATTCCATTTGTTATGGATTTCTTTCTAGTGGTTCTTTAGAAATCGACCTGATTAATTCTTGGATGGATGAGGGGACGAAAATAAAATTTCCATTGTTATTTTTTTTCTTTGTTTGGGGCGTGGATAGAATATTTGTCATTTAAAGTACCAGATTTTAGAAATCTTCCATTCAGCACTTGAAAGTATGAATAACCTTTCAAAACTTTTATTAGCATTTGGTACTATATAGAATGTATGTATTATTTTATAATGTTTCAACCATTATTCTTGTCATTAATTAAATTTGGCCTGCCTTGTTATATTTCATTATTTTCTGGTGTTGACATGTTATGTAATGACTCTATATTTCATTCTGTTTTTAGGATTTATGTTTCACAATAATGGAGTTGCATACTTTTGTTTTGTAGATTTCTTGGCAGAAACAACATTCTGCACCAACTGCTGGCATTGGCTTCTCACCATCTAATGACAAGGTCTTATTCTTATTCCTGATTGATCAGTAGGAAAAACAATAGAGTGGGAGGTTTCTCAGTACGAGTAAAATCATTCAAATTATCCGTTCCTCATTACAGACTCTTGCTAGTGTTGGGCTGGACAAGAAGTTGTACACTTTCGACTCAGGATCAAGGAGACCATCTTCTTTCATTTCTTATGAGGCACCCTTCTCAACAATGGCTTTCAGAGATGATGGTTTGATACTTGCTGCTGGAACAAGCAATGGACGTGTGGTTTTCTATGATGTTCGTGGGAAGCCTGAGCCTTACATTGTTCTTCGTGCTTTTAGTAATTCAGAGGTATTCCCCCTGTGTTTTGTAGAATCCTTGTCTGCTCCCTAAGTTGGTACACTTTGCTGGATTTTTCTTCTCCATTATGTTGTATAAGTATTGCTTGCTGTAGGCTCATGAATCATAAGTTTTGTTCATAATTTCATTTTTTCCATCTTCAGTTTTTGTTTTGTTTTTTGTTTTGTTATTTATTTATTTGTGCAATACATATGGTATTAAGAGAAATTGGAAGCAGCCTTTAAAACAGTTTTTGTTGGTTCATGTGCTAATGAATATAAAACCCACTCCAGCCCATTATTACTTTTTTTCGTTTTCAGTATTGATTGACTGCTAGATTTACTAACTATTTGCAGTACACACTTCAGGCAGTTACAAGTTTATCATGGCAAAGGTTAAAACCTGTCATTGTAAATGAAGGGAATTGCCCTGCTGAGGTGGCTCTTTTGGGAGGTGCCGTTGAAGATTCAATTCTCATGCCTGACCCACTTCCATCTGTAACTACATCCACCGTTGCGCTGTCTACAACAGTATCCAGTTCTCGGAATCCTGGCCGTTCAGGTCCAACTTTTGAAGCTTCACTGACAGAAACTTCCAGCACAATCTCAACTGCAGAGGAAACACCATATCGTAGCCATTTGCGGCCTGGGGGAAGCTTAGCAAGATTACATGCTCCTCGCTCCAGTTACAACTTTAAGGATGATATGGAGGTTTTTTCTCCTCTTGTGGATGTTCAGCCAATTACACCTTCTCTAGATAAGTTGTGGGATGACCACAATGGTCAGAAGAAGGACCATCCATTTGACAAGAAACCTCTATCTTCGCTGTTTTCTTCATCAGGCAGGAGGTTCTCTTCTATTGAGGATGGGGCAAGTGATCATCCAATATTTAATTGGAAACCTTCATCTTCCAAACAGGTATAACTAATCTTTTCCCTGCCAGTTTTTTCTAATATTTGCTAAATGAAAGGTCTTTCTGTGCAAGATGCACTGACACTTTGCCATAATAAATGCTCATTGTACTTGGTTTATTTTTAGTATTCTAGATCACCTTTCTGCAATCTCTATTGCCTTATAGTCCAGAAATATGAAGCTAGATAAATTTGTACTGAGTGAGTATGACAACTCTTGAGTTGTTATGCCCCATTTAGTATGCATTTACTTTTCACATTTGAGGTTATGATTTTCAGGCTCTTTTTATTAAACCAATGAAATCTGGCGAGTGTTTCTGTTAGAACTCCAAAGACTTCTAATGTTCTTGAAAGGGGTAATGTAGGTATTTTGGGTTGGGGCAATTGAGTAATGTGTTGGGAATGGCCCTCGGAGAATTGGGGAATAATAGAGGGGTATATGGGCAAATAGTTGGGGAGTTAGTTAGAGACTTATAATTATAAATAGAGAGCTTATGTAAGGGGAAAGACATGCATATTTTGAATGATTCCACTGTGGGCTACAAGAGATGATTCTCTAGAGAGAAAGGGAGGTTTCAAGTCCTATTCAAATGTGAGTTATCTTGTAGTTGTTTCTTTTATTTCGTAATACAACTCGGATCCTATCATAATGTCCTTGTGAGGTATTTTTTTTTCTTCGCTTTTTTGTGGAACAAGGTCCTTGTGGGTATAAATAGTGAAAGGAGAGTTATGGGAAGGGGTATGTGGGATTTGTCTAAGGTTGAGGAACCTTGAGGGAGTGGAGTGGTCATTGGTACTCTCAACCGCACCGGGTTTGTTCTTTTGGTTATCATTCTATTTCCTTATTATTACCTTGTAGTTCTTTTCATTGTTCATCTTAATGTATGCTCACTGTATTGTACAACTATTGCGATTATAGTGTAATGTCATTATTCAAAAATTTGTGTGCTTGGGATCTTTCTATTTGTTAAAGTTTGGTAAGGTATTAAGGTACCTAACAGTTTGCTGTGGGAGTCAATGCACAGTATGAGAAATGGTGATTTTAGTCACTAATACTTGATTTTTTGGCAGGATGATTCTCGATCTTCCTCTGGACAATTGGGTTCTACTCCTGCTCCAACCTTAAATTCTAAGAACGAAGACTCAGCTATTACTCCTCCTGAAGCTTGGGGTGGTGAGAAATTATCTGATAAATTTGCCCAACTGAGGCAGCCAGTGACTTTACCATCACGTTTTTCGATGTTGGCTTCAAGTTCGAGTAGTCAAACATCAAGCTCAATGATTTCTGGATTACAAGATCCGTCCTCATCAGTTAGCCAAAGCAGCATCACTTCCTTGACAAATTTGAATTTCAGCTATCCAAATTTGCGCACAAAAGATATAATAACCTCACAGGAGGTTTCATTGTCAATCCCTGAACACTTTTCTACTACTGCTGCATCTTTGTCCCTTGGTCCCAGAGGAACCATTGGACTGAGCAACCAAGATTCACCTAGGATTTCAACTATGACCCTTCCTCGTCGATTTTCTACATACGCGGAGAGGTTAAGCACCACTTCATCTTTCAGTGATGGTCTTCCAGTTAGCTCACCAAAAACAAAGAAAATGGGTTCTGAGACCAGGGAAGAGGTTTTGAATAGCCTGTCAAAGTTTGATGCATTATCTGTTAACGAATCAGGGATTCTTCCTGCAATGAACGTATGAATCCTCTTCCTAATTAAATATTTTTGCATGTTTTGCGTTACTCGGACTTTTAATTCTAGGCACTTCTGATTTTCTTGGGTAAATTAACAAAGAATTTAGTCTTTATGATTGGAGAAAGTTGAAATTTAGTTCCTGTGGTTTGGAGAAAGTTAGAATTTAGTCCCCATAATTTTAAAATTAGAATTCAGTCTCTATGGTTTAATAAAACCTAAGAAATAGTCCATGTCATTCGTAATCACATGCGGTTTTTTTGTCCAATCAGTTATTTAACTCACATTGTCATTATCGACATATGAATAGCTAACTTTCACATATTTAATTTGTCAATGATTACAAGCAAAAATGGCCATTTCTTTAAGTTTTATCAAACCATAGGAACTAACTCTAGTATTTAAAACCATAGAGACTAAACTCTAACTTTCTCCAAGCTATGAAGATTAAATTTTAGCTTTTAAAACTATATGGACTAAATTCTAATTTTCTTTTAACTTCTTAGTATACGTTTTAGTACTTTCTAATTATGATCATTTTATGGGGGTTACTTGCATGTATTTTTGTCACTTGTTTGTTGAAATGGAAAATGCTGGTCTCTGATCTCACTATCTGTGGCAGGGAGGATCCTTGCAACCACAAAAGGCATTGCAGACGGATGCCCAACAAGGAAATTCGTTTACGCTTCAGCTGTTTCAACGCACGTTGGAAGAAACGCTAGACTCCTTCCAGAGATCGATACACGACGACATGAGGAACCTTCATTTAGAGATTCTGAGACAGTTTCACATGCAGGAGGTACATGAGATTTCAGTTCATATACCACCAAACTAAAATGGGGTTTTTGTCATTTAGTCTTCATTTGCTCTGGTTTCATCTCATTTATATATCTCAAAACCTTTGCACAGATGGAAATGTCAAGTGTGATGAGCTCCATTTTGGAAAATCAAGCTGAGCTGATAAAAGAGGTCAAGTCTCTAAGGAAAGAAAACCAGCAGCTTCGGGATTTGCTTGGATCTTAGCCTATATCAAACACTGATTGGTTTTCGTTTCTTTTTTTGAACGTGTATATAAACATGATTTTCAGCTCATCAAAGGAATATTGTTGTATTTCTTGGCCTACATAATCACTGATTGTATTCATTTAACTGAGATAGTAGATGCATTTCTGTGAGTTTTTATTTATGGTGCAG

mRNA sequence

GTGAAATTCCACTCCCCAATTCTCTAATCCGTTCTTAATCTCATTGTCTTCCCCCACTTCCGAGAATAGTAATTTCCGAATTCTTTTATAAATCGGTAATTTTTTTTTTCTTCAGTAATTGGGAAGGTTGGTGGGTTCTCAGTAATTTCTTCAAAGAGGTTCGTTTTGCAGAGATTAGCCATGAATTCTGGAGATCCATCAATGGCGTTACTGGCTGCAAGTGCTGGAGATACTGTGAAATTATTTGATGTCTCTGTTCATTCCAACGATCTGGGCGATCCGTGCACTTTGAGCTACACTCCTTCGCCGGGTTTTCAAGTCAATTCAGTGAAGTGGAATCATACAAATTTGGTTGTGGCTAGTGCCGGAGATGATAAGAAGATCTCCTTGTGGCGTAAGAATGGTCAGAGCATGGGCACCATTCCAATTGCTGGTAGTGATAGTGGAGATAACATAGAGGAATCCATATATTCTATAAGTTTCAGCAACAAGGTATCGAGGTATATGTGTACTGGAGGGAGTGGCCATGTTGTAAGAATATGGGACTTGCAGAGAAAACGGTGTATAAAATGGCTGAGAGGACATAGCAACACTATAACTGGAGCTATGTACAATTGCAAAGATGAGCACCTTGCTTCAATCAGTCTTAGTGGTGATCTTTTACTTCACAATCTTGCATCTGGTGCAAGGACTGCCGAACTTAAAGACCCCAATGAACAGGTATTGAGGGTGCTCGACTATTCTCGTATGAGCAGACACCTTTTGGCAACTGCAGGTGATGATGGAACTGTACATCTATGGGATACCACTGGCCGCAATCCTAAGATTTCTTGGCAGAAACAACATTCTGCACCAACTGCTGGCATTGGCTTCTCACCATCTAATGACAAGACTCTTGCTAGTGTTGGGCTGGACAAGAAGTTGTACACTTTCGACTCAGGATCAAGGAGACCATCTTCTTTCATTTCTTATGAGGCACCCTTCTCAACAATGGCTTTCAGAGATGATGGTTTGATACTTGCTGCTGGAACAAGCAATGGACGTGTGGTTTTCTATGATGTTCGTGGGAAGCCTGAGCCTTACATTGTTCTTCGTGCTTTTAGTAATTCAGAGGCAGTTACAAGTTTATCATGGCAAAGGTTAAAACCTGTCATTGTAAATGAAGGGAATTGCCCTGCTGAGGTGGCTCTTTTGGGAGGTGCCGTTGAAGATTCAATTCTCATGCCTGACCCACTTCCATCTGTAACTACATCCACCGTTGCGCTGTCTACAACAGTATCCAGTTCTCGGAATCCTGGCCGTTCAGGTCCAACTTTTGAAGCTTCACTGACAGAAACTTCCAGCACAATCTCAACTGCAGAGGAAACACCATATCGTAGCCATTTGCGGCCTGGGGGAAGCTTAGCAAGATTACATGCTCCTCGCTCCAGTTACAACTTTAAGGATGATATGGAGGTTTTTTCTCCTCTTGTGGATGTTCAGCCAATTACACCTTCTCTAGATAAGTTGTGGGATGACCACAATGGTCAGAAGAAGGACCATCCATTTGACAAGAAACCTCTATCTTCGCTGTTTTCTTCATCAGGCAGGAGGTTCTCTTCTATTGAGGATGGGGCAAGTGATCATCCAATATTTAATTGGAAACCTTCATCTTCCAAACAGGATGATTCTCGATCTTCCTCTGGACAATTGGGTTCTACTCCTGCTCCAACCTTAAATTCTAAGAACGAAGACTCAGCTATTACTCCTCCTGAAGCTTGGGGTGGTGAGAAATTATCTGATAAATTTGCCCAACTGAGGCAGCCAGTGACTTTACCATCACGTTTTTCGATGTTGGCTTCAAGTTCGAGTAGTCAAACATCAAGCTCAATGATTTCTGGATTACAAGATCCGTCCTCATCAGTTAGCCAAAGCAGCATCACTTCCTTGACAAATTTGAATTTCAGCTATCCAAATTTGCGCACAAAAGATATAATAACCTCACAGGAGGTTTCATTGTCAATCCCTGAACACTTTTCTACTACTGCTGCATCTTTGTCCCTTGGTCCCAGAGGAACCATTGGACTGAGCAACCAAGATTCACCTAGGATTTCAACTATGACCCTTCCTCGTCGATTTTCTACATACGCGGAGAGGTTAAGCACCACTTCATCTTTCAGTGATGGTCTTCCAGTTAGCTCACCAAAAACAAAGAAAATGGGTTCTGAGACCAGGGAAGAGGTTTTGAATAGCCTGTCAAAGTTTGATGCATTATCTGTTAACGAATCAGGGATTCTTCCTGCAATGAACGGAGGATCCTTGCAACCACAAAAGGCATTGCAGACGGATGCCCAACAAGGAAATTCGTTTACGCTTCAGCTGTTTCAACGCACGTTGGAAGAAACGCTAGACTCCTTCCAGAGATCGATACACGACGACATGAGGAACCTTCATTTAGAGATTCTGAGACAGTTTCACATGCAGGAGATGGAAATGTCAAGTGTGATGAGCTCCATTTTGGAAAATCAAGCTGAGCTGATAAAAGAGGTCAAGTCTCTAAGGAAAGAAAACCAGCAGCTTCGGGATTTGCTTGGATCTTAGCCTATATCAAACACTGATTGGTTTTCGTTTCTTTTTTTGAACGTGTATATAAACATGATTTTCAGCTCATCAAAGGAATATTGTTGTATTTCTTGGCCTACATAATCACTGATTGTATTCATTTAACTGAGATAGTAGATGCATTTCTGTGAGTTTTTATTTATGGTGCAG

Coding sequence (CDS)

ATGAATTCTGGAGATCCATCAATGGCGTTACTGGCTGCAAGTGCTGGAGATACTGTGAAATTATTTGATGTCTCTGTTCATTCCAACGATCTGGGCGATCCGTGCACTTTGAGCTACACTCCTTCGCCGGGTTTTCAAGTCAATTCAGTGAAGTGGAATCATACAAATTTGGTTGTGGCTAGTGCCGGAGATGATAAGAAGATCTCCTTGTGGCGTAAGAATGGTCAGAGCATGGGCACCATTCCAATTGCTGGTAGTGATAGTGGAGATAACATAGAGGAATCCATATATTCTATAAGTTTCAGCAACAAGGTATCGAGGTATATGTGTACTGGAGGGAGTGGCCATGTTGTAAGAATATGGGACTTGCAGAGAAAACGGTGTATAAAATGGCTGAGAGGACATAGCAACACTATAACTGGAGCTATGTACAATTGCAAAGATGAGCACCTTGCTTCAATCAGTCTTAGTGGTGATCTTTTACTTCACAATCTTGCATCTGGTGCAAGGACTGCCGAACTTAAAGACCCCAATGAACAGGTATTGAGGGTGCTCGACTATTCTCGTATGAGCAGACACCTTTTGGCAACTGCAGGTGATGATGGAACTGTACATCTATGGGATACCACTGGCCGCAATCCTAAGATTTCTTGGCAGAAACAACATTCTGCACCAACTGCTGGCATTGGCTTCTCACCATCTAATGACAAGACTCTTGCTAGTGTTGGGCTGGACAAGAAGTTGTACACTTTCGACTCAGGATCAAGGAGACCATCTTCTTTCATTTCTTATGAGGCACCCTTCTCAACAATGGCTTTCAGAGATGATGGTTTGATACTTGCTGCTGGAACAAGCAATGGACGTGTGGTTTTCTATGATGTTCGTGGGAAGCCTGAGCCTTACATTGTTCTTCGTGCTTTTAGTAATTCAGAGGCAGTTACAAGTTTATCATGGCAAAGGTTAAAACCTGTCATTGTAAATGAAGGGAATTGCCCTGCTGAGGTGGCTCTTTTGGGAGGTGCCGTTGAAGATTCAATTCTCATGCCTGACCCACTTCCATCTGTAACTACATCCACCGTTGCGCTGTCTACAACAGTATCCAGTTCTCGGAATCCTGGCCGTTCAGGTCCAACTTTTGAAGCTTCACTGACAGAAACTTCCAGCACAATCTCAACTGCAGAGGAAACACCATATCGTAGCCATTTGCGGCCTGGGGGAAGCTTAGCAAGATTACATGCTCCTCGCTCCAGTTACAACTTTAAGGATGATATGGAGGTTTTTTCTCCTCTTGTGGATGTTCAGCCAATTACACCTTCTCTAGATAAGTTGTGGGATGACCACAATGGTCAGAAGAAGGACCATCCATTTGACAAGAAACCTCTATCTTCGCTGTTTTCTTCATCAGGCAGGAGGTTCTCTTCTATTGAGGATGGGGCAAGTGATCATCCAATATTTAATTGGAAACCTTCATCTTCCAAACAGGATGATTCTCGATCTTCCTCTGGACAATTGGGTTCTACTCCTGCTCCAACCTTAAATTCTAAGAACGAAGACTCAGCTATTACTCCTCCTGAAGCTTGGGGTGGTGAGAAATTATCTGATAAATTTGCCCAACTGAGGCAGCCAGTGACTTTACCATCACGTTTTTCGATGTTGGCTTCAAGTTCGAGTAGTCAAACATCAAGCTCAATGATTTCTGGATTACAAGATCCGTCCTCATCAGTTAGCCAAAGCAGCATCACTTCCTTGACAAATTTGAATTTCAGCTATCCAAATTTGCGCACAAAAGATATAATAACCTCACAGGAGGTTTCATTGTCAATCCCTGAACACTTTTCTACTACTGCTGCATCTTTGTCCCTTGGTCCCAGAGGAACCATTGGACTGAGCAACCAAGATTCACCTAGGATTTCAACTATGACCCTTCCTCGTCGATTTTCTACATACGCGGAGAGGTTAAGCACCACTTCATCTTTCAGTGATGGTCTTCCAGTTAGCTCACCAAAAACAAAGAAAATGGGTTCTGAGACCAGGGAAGAGGTTTTGAATAGCCTGTCAAAGTTTGATGCATTATCTGTTAACGAATCAGGGATTCTTCCTGCAATGAACGGAGGATCCTTGCAACCACAAAAGGCATTGCAGACGGATGCCCAACAAGGAAATTCGTTTACGCTTCAGCTGTTTCAACGCACGTTGGAAGAAACGCTAGACTCCTTCCAGAGATCGATACACGACGACATGAGGAACCTTCATTTAGAGATTCTGAGACAGTTTCACATGCAGGAGATGGAAATGTCAAGTGTGATGAGCTCCATTTTGGAAAATCAAGCTGAGCTGATAAAAGAGGTCAAGTCTCTAAGGAAAGAAAACCAGCAGCTTCGGGATTTGCTTGGATCTTAG

Protein sequence

MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVASAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRIWDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQVLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLASVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEPYIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTVALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNFKDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGASDHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLRQPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFSDGLPVSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQQGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAELIKEVKSLRKENQQLRDLLGS

Homology

[Close]

BLAST of Sed0004245 vs. NCBI nr
Match: XP_023537038.1 (protein NEDD1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1442.2 bits (3732), Expect = 0.0e+00
Identity = 742/801 (92.63%), Postives = 768/801 (95.88%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           M SGDPSMALLAASAGDTVKLFDVS +SNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MTSGDPSMALLAASAGDTVKLFDVSAYSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAGSD GDNIEESI+SISFSNKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDGGDNIEESIFSISFSNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDLLLHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLLLHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGDDGTVHLWDTTGRNPK+SWQKQHSAPTAGI FSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWQKQHSAPTAGISFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+S+SEAVTS+SWQRLKPVIVNEGNC A+VALLGGA+EDSILMPDPLPSVTTSTV
Sbjct: 301 YIVLRAYSSSEAVTSISWQRLKPVIVNEGNCTADVALLGGAIEDSILMPDPLPSVTTSTV 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
           ALSTT SSSRNPG SG TFEASLTETSSTISTAEETP+RSHLRPGGSL RLHAPRS+YNF
Sbjct: 361 ALSTTTSSSRNPGHSGLTFEASLTETSSTISTAEETPHRSHLRPGGSLTRLHAPRSNYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPL  LF SS RRFSSIEDG S
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLPLLFPSSSRRFSSIEDGPS 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIFNWK SSSKQDDSRSSS QLGSTPAPTLNSKNEDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFNWKSSSSKQDDSRSSSAQLGSTPAPTLNSKNEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIIT 600
           QP TLPSRF MLASSS+SQTSSSMISGLQDPSSS+SQSSITSLTNLNFSYPN+RTKD+I 
Sbjct: 541 QPATLPSRFGMLASSSNSQTSSSMISGLQDPSSSISQSSITSLTNLNFSYPNMRTKDVI- 600

Query: 601 SQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFS 660
           SQEVSLSIPEHFSTTAASLSLG RGTIGLSNQDSPR +TMTLPRRFSTYAERLSTTSSFS
Sbjct: 601 SQEVSLSIPEHFSTTAASLSLGTRGTIGLSNQDSPRTTTMTLPRRFSTYAERLSTTSSFS 660

Query: 661 DGLP--VSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           DGLP  V SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGG LQ QKALQTDAQ
Sbjct: 661 DGLPVGVGSPKTKKMGSETREEVLNNLSKFDTLSVTESGILPAMNGGPLQQQKALQTDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSV SS+L+NQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVTSSMLKNQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLR+LLGS
Sbjct: 781 LIKEVKSLRKENQQLRNLLGS 800

[Close]

BLAST of Sed0004245 vs. NCBI nr
Match: XP_022990911.1 (protein NEDD1 [Cucurbita maxima])

HSP 1 Score: 1441.8 bits (3731), Expect = 0.0e+00
Identity = 742/801 (92.63%), Postives = 767/801 (95.76%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           M SGDPSMALLAASAGDTVKLFDVS +SNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MTSGDPSMALLAASAGDTVKLFDVSAYSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAGSD GDNIEESI+SISFSNKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDGGDNIEESIFSISFSNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDLLLHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLLLHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGDDGTVHLWDTTGRNPK+SWQKQHSAPTAGI FSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWQKQHSAPTAGISFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+S+SEAVTS+SWQRLKPV VNEGNC A+VALLGGA+EDSILMPDPLPSVTTSTV
Sbjct: 301 YIVLRAYSSSEAVTSISWQRLKPVNVNEGNCTADVALLGGAIEDSILMPDPLPSVTTSTV 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
           ALSTT SSSRNPG SG TFEASLTET STISTAEETP+RSHLRPGGSL RLHAPRS+YNF
Sbjct: 361 ALSTTTSSSRNPGHSGLTFEASLTETCSTISTAEETPHRSHLRPGGSLTRLHAPRSNYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPL  LF SS RR SSIEDG S
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLPLLFPSSSRRISSIEDGPS 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIFNWK SSSKQDDSRSSSGQLGSTPAPTLNSKNEDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFNWKSSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIIT 600
           QP TLPSRF MLASSSSSQTSSSMISGLQDPSSS+SQSSITSLTNLNFSYPN+RTKD+I 
Sbjct: 541 QPATLPSRFGMLASSSSSQTSSSMISGLQDPSSSISQSSITSLTNLNFSYPNMRTKDVI- 600

Query: 601 SQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFS 660
           SQEVSLSIPEHFSTTAASLSLG RGTIGLSNQDSPR +TMTLPRRFSTYAERLSTTSSFS
Sbjct: 601 SQEVSLSIPEHFSTTAASLSLGTRGTIGLSNQDSPRTTTMTLPRRFSTYAERLSTTSSFS 660

Query: 661 DGLP--VSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           DGLP  V SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGG LQPQKALQTDAQ
Sbjct: 661 DGLPVGVGSPKTKKMGSETREEVLNNLSKFDTLSVTESGILPAMNGGPLQPQKALQTDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSV SS+L+NQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVTSSMLKNQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLR+LLGS
Sbjct: 781 LIKEVKSLRKENQQLRNLLGS 800

[Close]

BLAST of Sed0004245 vs. NCBI nr
Match: KAG6602643.1 (Protein NEDD1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1436.4 bits (3717), Expect = 0.0e+00
Identity = 739/801 (92.26%), Postives = 767/801 (95.76%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           M SGDPSMALLAASAGDTVKLFDVS +SNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MTSGDPSMALLAASAGDTVKLFDVSAYSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDK+ISLWRKNGQSMGTIPIAGSD GDNIEESI+SISFSNKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKRISLWRKNGQSMGTIPIAGSDGGDNIEESIFSISFSNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDLLLHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLLLHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGD+GTVHLWDTTGRNPK+SWQKQHSAPTAGI FSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDNGTVHLWDTTGRNPKVSWQKQHSAPTAGISFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+S+ EAVTS+SWQRLKPVIVNEGNC A+VALLGGA+EDSILMPDPLPSVTTSTV
Sbjct: 301 YIVLRAYSSLEAVTSISWQRLKPVIVNEGNCTADVALLGGAIEDSILMPDPLPSVTTSTV 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
           ALSTT SSSRNPG SG TFEASLTETSSTISTAEETP+RSHLRPGGSL RLHAPRS+YNF
Sbjct: 361 ALSTTTSSSRNPGHSGLTFEASLTETSSTISTAEETPHRSHLRPGGSLTRLHAPRSNYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPL  LF SS RRFSSIEDG S
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLPLLFPSSSRRFSSIEDGPS 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIFNWK SSSKQDDSRSSSGQLGSTPAPTLNSKNEDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFNWKSSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIIT 600
           QP TLPSRF MLASSSSSQTSSSMISGLQDPSSS++QSSITSLTNLNFSYPN+RTKD+I 
Sbjct: 541 QPATLPSRFGMLASSSSSQTSSSMISGLQDPSSSITQSSITSLTNLNFSYPNMRTKDVI- 600

Query: 601 SQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFS 660
           SQEVSLSIPEHFSTTAASLSLG RGTIGLSNQDSPR +TMTLPRRFSTYAERLSTTSSFS
Sbjct: 601 SQEVSLSIPEHFSTTAASLSLGTRGTIGLSNQDSPRTTTMTLPRRFSTYAERLSTTSSFS 660

Query: 661 DGLP--VSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           DGLP  V SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGG L  QKALQTDAQ
Sbjct: 661 DGLPVGVGSPKTKKMGSETREEVLNNLSKFDTLSVTESGILPAMNGGPLLQQKALQTDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSV SS+L+NQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVTSSMLKNQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLR+LLGS
Sbjct: 781 LIKEVKSLRKENQQLRNLLGS 800

[Close]

BLAST of Sed0004245 vs. NCBI nr
Match: XP_038886298.1 (protein NEDD1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1435.6 bits (3715), Expect = 0.0e+00
Identity = 738/801 (92.13%), Postives = 768/801 (95.88%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           MN GDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA
Sbjct: 1   MNLGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAG+DSGDNIEESI+SISFSNKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGTDSGDNIEESIFSISFSNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDL+LHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLILHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR SRHLL TAGDDGTVHLWDTTGRNPK+SWQKQHSAP AGIGFSPSNDKTLA
Sbjct: 181 VLRVLDYSRTSRHLLVTAGDDGTVHLWDTTGRNPKVSWQKQHSAPAAGIGFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSF++YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFVAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+++SEAVTSLSWQRLKPVIVNEGNC AEVALLGGA+EDSILMPDPLPSVTTSTV
Sbjct: 301 YIVLRAYTSSEAVTSLSWQRLKPVIVNEGNCTAEVALLGGAIEDSILMPDPLPSVTTSTV 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGS--LARLHAPRSSY 420
            LSTT+SSSRNPGRSGPTFEASLTETSST STAEETP RSHLRPGGS  LARLH PRSSY
Sbjct: 361 PLSTTISSSRNPGRSGPTFEASLTETSSTFSTAEETPLRSHLRPGGSLALARLHPPRSSY 420

Query: 421 NFKDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDG 480
           NFKDDMEVFSPLVDVQPITPSLDKLWDD NG KKD+PFDKKPLS LF SS RRFSSIEDG
Sbjct: 421 NFKDDMEVFSPLVDVQPITPSLDKLWDDPNGPKKDNPFDKKPLSMLFPSSSRRFSSIEDG 480

Query: 481 ASDHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQ 540
           ASDHPI++WK SSSKQDDSRSSSGQLGSTPAP LNSKNEDS+ITPPEAWGGEKLS+KFAQ
Sbjct: 481 ASDHPIYHWKSSSSKQDDSRSSSGQLGSTPAPALNSKNEDSSITPPEAWGGEKLSEKFAQ 540

Query: 541 LRQPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDI 600
           LRQP+TLPSRF MLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLR KD 
Sbjct: 541 LRQPMTLPSRFGMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRIKD- 600

Query: 601 ITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSS 660
           +TSQ+VSLSIPEH S+TA+SLSLG R  IGLSN DSPR + MTLPRRFSTYAERLSTTSS
Sbjct: 601 VTSQDVSLSIPEHLSSTASSLSLGTRVNIGLSNTDSPRATAMTLPRRFSTYAERLSTTSS 660

Query: 661 FSDGLPVSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           FSDGLP+ SPKTKKMGSETREEVLN+LSKFD LSV E+GI P+MNGGSLQPQKALQ+DAQ
Sbjct: 661 FSDGLPMGSPKTKKMGSETREEVLNNLSKFDTLSVTEAGIPPSMNGGSLQPQKALQSDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLRDLLGS
Sbjct: 781 LIKEVKSLRKENQQLRDLLGS 800

[Close]

BLAST of Sed0004245 vs. NCBI nr
Match: XP_022960476.1 (protein NEDD1 [Cucurbita moschata])

HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 740/801 (92.38%), Postives = 766/801 (95.63%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           M SGDPSMALLAASAGDTVKLFDVS +SNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MTSGDPSMALLAASAGDTVKLFDVSAYSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAGSD GDNIEESI+SISFSNKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDGGDNIEESIFSISFSNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDLLLHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLLLHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGDDGTVHLWDTTGRNPK+SWQKQHSAPTAGI FSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWQKQHSAPTAGISFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+S+SEAVTS+SWQRLKPVIVNEGNC A+VALLGGA+EDSILMPDPLPSVTTSTV
Sbjct: 301 YIVLRAYSSSEAVTSISWQRLKPVIVNEGNCTADVALLGGAIEDSILMPDPLPSVTTSTV 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
           ALSTT SSSRNPG SG TFEASLTETSSTISTAEETP+RSHLRPGGSL RLHAPRS+YNF
Sbjct: 361 ALSTTTSSSRNPGHSGLTFEASLTETSSTISTAEETPHRSHLRPGGSLTRLHAPRSNYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPL  LF SS RRFSSIEDG S
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLPLLFPSSSRRFSSIEDGPS 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIFNWK SSSKQDDSRSSSGQLGSTPAPTLNSKNEDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFNWKSSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIIT 600
           QP TLPSRF MLASSSSSQTSSSMISGLQDP SS+SQSSITSLTNLNFSYPN+RTKD+I 
Sbjct: 541 QPATLPSRFGMLASSSSSQTSSSMISGLQDP-SSISQSSITSLTNLNFSYPNMRTKDVI- 600

Query: 601 SQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFS 660
           SQEVSLSIPEHFST AASLSLG RGTIGLSNQDSPR +TMTLPRRFSTYAERLSTTSSFS
Sbjct: 601 SQEVSLSIPEHFSTAAASLSLGTRGTIGLSNQDSPRTTTMTLPRRFSTYAERLSTTSSFS 660

Query: 661 DGLP--VSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           DGLP  V SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGG L  QKALQTDAQ
Sbjct: 661 DGLPVGVGSPKTKKMGSETREEVLNNLSKFDTLSVTESGILPAMNGGPLLQQKALQTDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFH+QEMEMSSV SS+L+NQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHVQEMEMSSVTSSMLKNQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLR+LLGS
Sbjct: 781 LIKEVKSLRKENQQLRNLLGS 799

[Close]

BLAST of Sed0004245 vs. ExPASy Swiss-Prot
Match: B3H5K9 (Protein NEDD1 OS=Arabidopsis thaliana OX=3702 GN=NEDD1 PE=2 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 7.3e-248
Identity = 480/810 (59.26%), Postives = 584/810 (72.10%), Query Frame = 0


Query: 2   NSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVAS 61
           N  +PS  LLAAS GDTVKLFDVS    D GDPC LSYTPSPG  VNSVKWNHTNLVVAS
Sbjct: 4   NLVEPSWRLLAASGGDTVKLFDVSA---DSGDPCVLSYTPSPGCAVNSVKWNHTNLVVAS 63

Query: 62  AGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRIW 121
            G+DKKISLWRKNGQS+GT+P+ G D GD+ EE + +ISFS K SRY+C+GG+G +V+IW
Sbjct: 64  TGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIW 123

Query: 122 DLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQV 181
           DLQRK CIK L+GH++TITG MYNCKDEHLAS+S+ GDL++HNLASGAR  ELKDPN QV
Sbjct: 124 DLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQV 183

Query: 182 LRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLAS 241
           LR+LDYSR SRHLL TAGDDGTVHLWDTTGR+PK+SW KQHSAPTAG+ FSPSN+K +AS
Sbjct: 184 LRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS 243

Query: 242 VGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEPY 301
           VG+DKKLYT+DSGSRR SS I+YEAPFS++AF D+G IL AGTSNGRVVFYD+RGKP+P 
Sbjct: 244 VGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSNGRVVFYDIRGKPQPV 303

Query: 302 IVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTVA 361
            VL AFSNSE VTSLSWQ  KPVIVNE N  +E+ALLG  VEDS+++PDPLPS T S   
Sbjct: 304 TVLHAFSNSEDVTSLSWQTSKPVIVNEKNYTSEMALLGSTVEDSVVIPDPLPSTTPS--- 363

Query: 362 LSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNFK 421
                 S+  PG  G      ++ ++   S+ E+TP R+HL P G L RLHA R++ ++ 
Sbjct: 364 ---ASQSAMAPGSRG------VSASTVNASSVEQTPNRNHLWPSGPLGRLHALRANDSYN 423

Query: 422 DDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDH-PFDKKPLSSLFSSSGRRFSSIEDGAS 481
           DDM VFSP++DV     S++K  D      KDH   D KP S LF SS + +S  ++G+ 
Sbjct: 424 DDMGVFSPIIDVS----SVEKWADSEGYNNKDHLVVDNKPSSLLFPSSSKGYSFGDNGSK 483

Query: 482 DHPIFNWKPSS-SKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQL 541
           +HPIF+WKPSS SKQDD R++    GS   PT +SK+EDSA+TPPEAWGG+K S+KF QL
Sbjct: 484 EHPIFDWKPSSTSKQDDPRAAFSSFGSI-TPTASSKSEDSALTPPEAWGGDKFSEKFNQL 543

Query: 542 RQP--------VTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYP 601
                      +  PSR ++  SS+ + TS SM S  +D   S  Q   T+  N +  +P
Sbjct: 544 ANEKFSDKFSHLHAPSRLAV--SSTGASTSGSMFSSSRDFPLSHGQ---TNFANASLEFP 603

Query: 602 NLRTKDIITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAE 661
            +R  D  ++ E S +  ++      S  L  +G     N DS R+S     RRFSTYAE
Sbjct: 604 RIR--DFSSTFETSSTQTDN---NLPSSPLFTKGITAPGNIDSLRLSP-NFTRRFSTYAE 663

Query: 662 RLSTTSSFSDGLPVS---SPKTKKMGSETREEVLNS-LSKFDALSVNESGILPAMNGGSL 721
           R+STTSSFSDG  +S   SPK KK GSETREEVLN  L++ + +   E+G +P MN G L
Sbjct: 664 RISTTSSFSDGASLSLGGSPKIKKTGSETREEVLNHLLARPETVVATEAGAMPLMNQGGL 723

Query: 722 QPQKALQTDAQQGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSS 781
           +  +  Q      ++FTLQLFQRTLE TLDSFQ SIHDD+RNLH+EILRQFHM EMEMS 
Sbjct: 724 KQSQTDQQQVMGSSNFTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSK 782

Query: 782 VMSSILENQAELIKEVKSLRKENQQLRDLL 798
           V+SSILENQAE +KE+K LRKENQ+LR  L
Sbjct: 784 VLSSILENQAEQMKELKLLRKENQELRQRL 782

[Close]

BLAST of Sed0004245 vs. ExPASy Swiss-Prot
Match: Q8NHV4 (Protein NEDD1 OS=Homo sapiens OX=9606 GN=NEDD1 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-39
Identity = 191/804 (23.76%), Postives = 325/804 (40.42%), Query Frame = 0


Query: 13  ASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTN--LVVASAGDDKKISL 72
           AS+GD +K++D S  S  L D      +P     ++S+ W+  N  LV AS+  DK +  
Sbjct: 8   ASSGDDIKIWDAS--SMTLVDKFNPHTSP---HGISSICWSSNNNFLVTASSSGDKIVV- 67

Query: 73  WRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRIWDLQRKRCIK 132
                 S    P+   +  +  +++  ++   N  S Y+ +GG  + V IWDL+ KR  +
Sbjct: 68  -----SSCKCKPVPLLELAEGQKQTCVNL---NSTSMYLVSGGLNNTVNIWDLKSKRVHR 127

Query: 133 WLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQVLRVLDYSRM 192
            L+ H + +T   YN  D ++AS SLSG+++LH++ +   +      + Q +R L YS  
Sbjct: 128 SLKDHKDQVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLF 187

Query: 193 SRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLASVGLDKKLYT 252
            + LL +  D+G V LWD   ++P  ++   H AP +GI FSP N+    ++GLDK++  
Sbjct: 188 KKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIIL 247

Query: 253 FDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEPYIVLR----- 312
           +D+ S++    +  + P + + F  DG  LA G+S G++  YD+R    P   +      
Sbjct: 248 YDTSSKKLVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTS 307

Query: 313 ----AFSNSEAVTSLSWQR---LKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTS 372
               AF  S  +T  S  +    KP  VN+ +     A  GG     I+   P  S+ T 
Sbjct: 308 VQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAA-SGGVQNSGIVREAPATSIAT- 367

Query: 373 TVALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSY 432
              L   ++S+   G      +A L  + +T + ++ET                     +
Sbjct: 368 --VLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETD--------------SGKNQDF 427

Query: 433 NFKDDM------EVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKP-LSSLFSSSGRR 492
           +  DD       ++FSP+ D   +    D+     +G      FD  P L+S+F      
Sbjct: 428 SSFDDTGKSSLGDMFSPIRDDAVVNKGSDESIGKGDG------FDFLPQLNSVFPPRKNP 487

Query: 493 FSSIEDGASDHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEK 552
            +S        P+  +  S  K++                 N   + +A +     G ++
Sbjct: 488 VTSSTSVLHSSPLNVFMGSPGKEE-----------------NENRDLTAESKKIYMGKQE 547

Query: 553 LSDKFAQLRQPVTLPSRFSML-ASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSY 612
             D F QL + VT  +    L  S SS+QT +S     + P + +    I        S 
Sbjct: 548 SKDSFKQLAKLVTSGAESGNLNTSPSSNQTRNS--EKFEKPENEIEAQLICEPPINGSST 607

Query: 613 PNLRTKDIITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYA 672
           PN +    +T            +  A+SLS     +IG + Q++P               
Sbjct: 608 PNPKIASSVT------------AGVASSLSEKIADSIGNNRQNAPL-------------- 657

Query: 673 ERLSTTSSFSDGLPVSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQ 732
                                                                       
Sbjct: 668 ------------------------------------------------------------ 657

Query: 733 KALQTDAQQGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMS 792
                      S  ++  Q  ++ETLD F+ + H D+ NL +E+++QFHMQ  EM S++ 
Sbjct: 728 ----------TSIQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLE 657

Query: 793 SILENQAELIKEVKSLRKENQQLR 795
               N+  L+ E++ LR+EN++LR
Sbjct: 788 RYSVNEG-LVAEIERLREENKRLR 657

[Close]

BLAST of Sed0004245 vs. ExPASy Swiss-Prot
Match: Q3B7M6 (Protein NEDD1 OS=Bos taurus OX=9913 GN=NEDD1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.9e-38
Identity = 198/788 (25.13%), Postives = 321/788 (40.74%), Query Frame = 0


Query: 13  ASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTN--LVVASAGDDKKISL 72
           AS+GD VK++D S  S  L D       P     ++SV W+  N  LV AS+  DK +  
Sbjct: 8   ASSGDDVKIWDAS--SMTLVDKFNPHTAP---HAISSVCWSSNNNFLVTASSSGDKIVV- 67

Query: 73  WRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRIWDLQRKRCIK 132
                 S    P+   + G+  +++  S+   N  S Y+ +GG  + V IWDL+ KR  +
Sbjct: 68  -----SSCKCKPVPLLELGEGQKQTCVSL---NSTSMYLVSGGLNNTVNIWDLKSKRVHR 127

Query: 133 WLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQVLRVLDYSRM 192
            L+ H + +T   YN  D ++AS SLSG+++LH++ +   +      + Q +R L YS  
Sbjct: 128 SLKDHKDEVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSIRHLKYSLF 187

Query: 193 SRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLASVGLDKKLYT 252
            + LL +  D+G V LWD   ++P  ++   H AP +GI FSP N+    +VGLDK++  
Sbjct: 188 KKSLLGSVSDNGIVTLWDVNSQSPYHNFDSTHKAPASGICFSPVNELLFVTVGLDKRIIL 247

Query: 253 FDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEPYIVLRAFSNS 312
           +D+ S++    +  +AP + + F  DG  LA G+S G++  YD+R    P   + A   S
Sbjct: 248 YDTSSKKLVKTLVADAPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPIKTISAHKTS 307

Query: 313 EAVTSLSWQR-LKPVIVNEG--NCPAEVALLGGAVEDSILMPDPLPSVTTSTVALSTTVS 372
               +  +   L    +N+G  N P                     +V   T  +S    
Sbjct: 308 VQCIAFQYSTVLSKSGLNKGCSNKPT--------------------AVNKRTANVSAGGG 367

Query: 373 SSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNFKDDMEVF 432
            ++NPG         +   ++T S A   P  +    G       AP+        +   
Sbjct: 368 GAQNPG---------VVREAATTSIATVPPQPTAAAVGKGAV---APQDKAGLPRSIN-- 427

Query: 433 SPLVDVQPITPSLDKLWDDHNGQKKDHP-FDKKPLSSLFSSSGRRFSSIEDGASDHPIFN 492
                    T +L K  +  +G+ +D   FD    SSL    G  FS + D A       
Sbjct: 428 ---------TDTLSK--EAESGKNQDFSNFDDSGKSSL----GDMFSPVRDDA------- 487

Query: 493 WKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLRQPVTLP 552
                SK  D     G  G    P LNS                               P
Sbjct: 488 ---VVSKGGDESIGKGD-GLDFLPQLNS-----------------------------VFP 547

Query: 553 SRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIITSQEVSL 612
            R + + SS+S   SS +   +  P    +++   +  +         +KD         
Sbjct: 548 PRKNPVVSSTSVLHSSPLNVFMGSPGKEENENHDLTAESKKMYLGKQESKD--------- 607

Query: 613 SIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFSDGLPVS 672
                F   A  +S    G +      SP  +    P +F    + +            S
Sbjct: 608 ----SFKQFAKLISGAETGNLNA----SPSSNQTRSPEKFEKPEKEIEAQLINEPPGNGS 656

Query: 673 SPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQQGNSFTLQ 732
           S    K+ S     V  SLS+    ++           G+ +P   L       +S  ++
Sbjct: 668 STPNPKIASSVTAGVAGSLSEKIVDTI-----------GNSRPNAPL-------SSVQIR 656

Query: 733 LFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAELIKEVKSL 792
             Q  ++ETLD F+ + H D+ NL +E+++QFHMQ  EM S++     N+  L+ E++ L
Sbjct: 728 FIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEG-LVAEIERL 656

Query: 793 RKENQQLR 795
           R+EN++LR
Sbjct: 788 REENKRLR 656

[Close]

BLAST of Sed0004245 vs. ExPASy Swiss-Prot
Match: P33215 (Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1 PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 2.3e-36
Identity = 199/800 (24.88%), Postives = 332/800 (41.50%), Query Frame = 0


Query: 13  ASAGDTVKLFDVS-VHSNDLGDPCTLSYTPSPGFQVNSVKWNHTN--LVVASAGDDKKIS 72
           AS+GD VK++D S +   D  +P T     SP   ++S+ W+  N  LV AS+  DK + 
Sbjct: 8   ASSGDDVKIWDASFLTLVDKFNPHT-----SP-HGISSICWSSNNNFLVTASSSGDKIVV 67

Query: 73  LWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRIWDLQRKRCI 132
                  S    P+   +  +  +++   +   N  S Y+ +GG  + V IWDL+ KR  
Sbjct: 68  ------SSCKCKPVPLLELAEGQKQTCVDL---NSTSMYLASGGLNNTVNIWDLKSKRLH 127

Query: 133 KWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQVLRVLDYSR 192
           + L+ H   +T   YN  D ++AS SLSG+++LH++ +   +      ++Q +R + YS 
Sbjct: 128 RSLKDHKCEVTCVAYNWNDCYIASGSLSGEIILHSVTTNTSSTPFGHGSKQPIRHIKYSL 187

Query: 193 MSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLASVGLDKKLY 252
             + LL +  D+G V LWD   ++   ++   H AP +GI FSP N+    ++GLDK++ 
Sbjct: 188 FRKSLLGSVSDNGVVTLWDVNSQSSYHTFDSTHKAPASGICFSPVNELLFVTIGLDKRII 247

Query: 253 TFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEPYIVLR---- 312
            +D+ S++    +  + P + + F  DG  LA G+S G++  YD+R    P   +     
Sbjct: 248 LYDTSSKKLVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKT 307

Query: 313 -----AFSNSEAVTSLSWQR---LKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTT 372
                AF  S ++T  S  +    K   VN+ + P   +  G A    I+   P PS+ T
Sbjct: 308 SVQCIAFQYSTSLTKASLSKGSSNKATAVNKRSVPVS-SSSGAAQNSGIVREAPSPSIAT 367

Query: 373 STVALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSS 432
               L   V+++   G      EA L  + ST   ++ET        G S        + 
Sbjct: 368 ---VLPQPVTTALGKGSGAAQDEAGLARSKSTDIFSKETD------AGKSQDFSSFDDTG 427

Query: 433 YNFKDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIED 492
            N   DM  FSP+ D                              ++ S  G       D
Sbjct: 428 KNSLGDM--FSPIRD-----------------------------DAVVSKGGDESIGKGD 487

Query: 493 GASDHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTL--NSKNEDSAITPPEAWGGEKLSDK 552
           G    P  N      +++   SSS  L S+P   L  +S  E++    P A        K
Sbjct: 488 GLDFLPQLN-SVFPLRKNAGASSSLVLHSSPLNVLMGSSGKEENESHEPSAESKRAYLGK 547

Query: 553 FAQLRQPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNL-NFSYPNLR 612
               ++P     +F+ L SS +         G+ +   S +Q+      NL  F  P   
Sbjct: 548 ----QEPKDAMKQFTKLISSGAE-------PGILNTCPSSNQA-----RNLEKFEKPE-- 607

Query: 613 TKDIITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLS 672
            KDI                              L ++ S   S+ T+P+          
Sbjct: 608 -KDIEAQ---------------------------LIHEPSVNGSSTTVPK---------- 657

Query: 673 TTSSFSDGLPVSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQ 732
                      +S  T  + S   E+++++L                   G+ +P   L 
Sbjct: 668 ----------AASSVTAGVASSLSEKIVDTL-------------------GNSRPGAPL- 657

Query: 733 TDAQQGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILE 792
                  S  ++  Q  ++ETLD F+ + H D+ NL +E+++QFH+Q  EM S++     
Sbjct: 728 ------TSVQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHIQLNEMHSLLERYSV 657

Query: 793 NQAELIKEVKSLRKENQQLR 795
           N+  L+ E++ LR+EN++LR
Sbjct: 788 NEG-LVAEIERLREENKRLR 657

[Close]

BLAST of Sed0004245 vs. ExPASy Swiss-Prot
Match: Q4V7Y7 (Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis OX=8355 GN=katnb1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-12
Identity = 95/412 (23.06%), Postives = 172/412 (41.75%), Query Frame = 0


Query: 44  GFQVNSVKWNHTN-LVVASAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFS 103
           G  V+SV    ++  +VA+ GDD ++ LW  N  +   + + G  +       + S+ F+
Sbjct: 20  GCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNC-IMSLTGHTT------PVESVRFN 79

Query: 104 NKVSRYMCTGGSGHVVRIWDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLL 163
           N     +  G     +RIWDL+  + ++ L GH   ++   ++   E +AS SL  ++ L
Sbjct: 80  NS-EELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKL 139

Query: 164 HNLASGARTAELKDPNEQVLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQH 223
            ++         K  + Q +R L +S   +  LA+A DD +V LWD T     ++   +H
Sbjct: 140 WDVRRKGCVFRYKG-HTQAVRCLRFSPDGK-WLASASDDHSVKLWDLTA-GKMMAELSEH 199

Query: 224 SAPTAGIGFSPSNDKTLASVGLDKKLYTFDSGSRRPSSFISYEA-PFSTMAFRDDGLILA 283
             P   I F P N+  LAS   D+ +  +D    +       E  P   + F +DG  + 
Sbjct: 200 KGPVNIIEFHP-NEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIF 259

Query: 284 AGTSNGRVVF-------YDVRGKPEPYIVLRAFSNSEAV-TSLSWQRLKPVIVNEGNCPA 343
            G  +   V+       +D        +   A  N++ +  S +   +   +V+      
Sbjct: 260 CGGKDSLRVYGWEPDQCFDTVPVGWGKVSDLAICNNQLIGVSSAQSNISSFVVDLTRVKM 319

Query: 344 EVALLGGAVEDSILMPDPLPSVTTSTVALSTTVSSSRNPGRSGPTFEASLTETSSTISTA 403
                 G V   I +  P P+ T+         ++   P R  PT +    E+ + I   
Sbjct: 320 TGCAPQGPVPAEIPISQPAPTGTSLRRIYERPSTTCSKPNRVSPTSDDEEKESRAEIQNP 379

Query: 404 EETPYRSHLRPGGSLARLHAPRSSYNF----KDDMEVFSPLVDVQP--ITPS 440
           E+  Y+   +P  +++R   PR+S  F    +DD+ +    V   P  +TP+
Sbjct: 380 ED--YKEIFQPKNAISRT-PPRNSEPFPAPPEDDISIVKEAVAPTPDVVTPA 416

[Close]

BLAST of Sed0004245 vs. ExPASy TrEMBL
Match: A0A6J1JP94 (protein NEDD1 OS=Cucurbita maxima OX=3661 GN=LOC111487660 PE=4 SV=1)

HSP 1 Score: 1441.8 bits (3731), Expect = 0.0e+00
Identity = 742/801 (92.63%), Postives = 767/801 (95.76%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           M SGDPSMALLAASAGDTVKLFDVS +SNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MTSGDPSMALLAASAGDTVKLFDVSAYSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAGSD GDNIEESI+SISFSNKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDGGDNIEESIFSISFSNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDLLLHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLLLHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGDDGTVHLWDTTGRNPK+SWQKQHSAPTAGI FSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWQKQHSAPTAGISFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+S+SEAVTS+SWQRLKPV VNEGNC A+VALLGGA+EDSILMPDPLPSVTTSTV
Sbjct: 301 YIVLRAYSSSEAVTSISWQRLKPVNVNEGNCTADVALLGGAIEDSILMPDPLPSVTTSTV 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
           ALSTT SSSRNPG SG TFEASLTET STISTAEETP+RSHLRPGGSL RLHAPRS+YNF
Sbjct: 361 ALSTTTSSSRNPGHSGLTFEASLTETCSTISTAEETPHRSHLRPGGSLTRLHAPRSNYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPL  LF SS RR SSIEDG S
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLPLLFPSSSRRISSIEDGPS 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIFNWK SSSKQDDSRSSSGQLGSTPAPTLNSKNEDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFNWKSSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIIT 600
           QP TLPSRF MLASSSSSQTSSSMISGLQDPSSS+SQSSITSLTNLNFSYPN+RTKD+I 
Sbjct: 541 QPATLPSRFGMLASSSSSQTSSSMISGLQDPSSSISQSSITSLTNLNFSYPNMRTKDVI- 600

Query: 601 SQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFS 660
           SQEVSLSIPEHFSTTAASLSLG RGTIGLSNQDSPR +TMTLPRRFSTYAERLSTTSSFS
Sbjct: 601 SQEVSLSIPEHFSTTAASLSLGTRGTIGLSNQDSPRTTTMTLPRRFSTYAERLSTTSSFS 660

Query: 661 DGLP--VSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           DGLP  V SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGG LQPQKALQTDAQ
Sbjct: 661 DGLPVGVGSPKTKKMGSETREEVLNNLSKFDTLSVTESGILPAMNGGPLQPQKALQTDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSV SS+L+NQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVTSSMLKNQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLR+LLGS
Sbjct: 781 LIKEVKSLRKENQQLRNLLGS 800

[Close]

BLAST of Sed0004245 vs. ExPASy TrEMBL
Match: A0A6J1H7Q0 (protein NEDD1 OS=Cucurbita moschata OX=3662 GN=LOC111461198 PE=4 SV=1)

HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 740/801 (92.38%), Postives = 766/801 (95.63%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           M SGDPSMALLAASAGDTVKLFDVS +SNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MTSGDPSMALLAASAGDTVKLFDVSAYSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAGSD GDNIEESI+SISFSNKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDGGDNIEESIFSISFSNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDLLLHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLLLHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGDDGTVHLWDTTGRNPK+SWQKQHSAPTAGI FSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWQKQHSAPTAGISFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+S+SEAVTS+SWQRLKPVIVNEGNC A+VALLGGA+EDSILMPDPLPSVTTSTV
Sbjct: 301 YIVLRAYSSSEAVTSISWQRLKPVIVNEGNCTADVALLGGAIEDSILMPDPLPSVTTSTV 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
           ALSTT SSSRNPG SG TFEASLTETSSTISTAEETP+RSHLRPGGSL RLHAPRS+YNF
Sbjct: 361 ALSTTTSSSRNPGHSGLTFEASLTETSSTISTAEETPHRSHLRPGGSLTRLHAPRSNYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPL  LF SS RRFSSIEDG S
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLPLLFPSSSRRFSSIEDGPS 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIFNWK SSSKQDDSRSSSGQLGSTPAPTLNSKNEDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFNWKSSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDIIT 600
           QP TLPSRF MLASSSSSQTSSSMISGLQDP SS+SQSSITSLTNLNFSYPN+RTKD+I 
Sbjct: 541 QPATLPSRFGMLASSSSSQTSSSMISGLQDP-SSISQSSITSLTNLNFSYPNMRTKDVI- 600

Query: 601 SQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSSFS 660
           SQEVSLSIPEHFST AASLSLG RGTIGLSNQDSPR +TMTLPRRFSTYAERLSTTSSFS
Sbjct: 601 SQEVSLSIPEHFSTAAASLSLGTRGTIGLSNQDSPRTTTMTLPRRFSTYAERLSTTSSFS 660

Query: 661 DGLP--VSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           DGLP  V SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGG L  QKALQTDAQ
Sbjct: 661 DGLPVGVGSPKTKKMGSETREEVLNNLSKFDTLSVTESGILPAMNGGPLLQQKALQTDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFH+QEMEMSSV SS+L+NQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHVQEMEMSSVTSSMLKNQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLR+LLGS
Sbjct: 781 LIKEVKSLRKENQQLRNLLGS 799

[Close]

BLAST of Sed0004245 vs. ExPASy TrEMBL
Match: A0A6J1FHX7 (protein NEDD1-like OS=Cucurbita moschata OX=3662 GN=LOC111445500 PE=4 SV=1)

HSP 1 Score: 1429.5 bits (3699), Expect = 0.0e+00
Identity = 735/801 (91.76%), Postives = 766/801 (95.63%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAG+DSGDNIEESI+SISFS+KVSRYMCTGGSGH+VRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGNDSGDNIEESIFSISFSSKVSRYMCTGGSGHIVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDL+LHNLASGAR  ELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLILHNLASGARATELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGDDGTVHLWDTTGRNPK+SWQKQHSAPTAGIGFSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWQKQHSAPTAGIGFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVG+DKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGMDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRAFS+SEAVTSLSWQRLKPVIVNEGNC AEVALLGGA+EDSILMPDPLPSVTTST+
Sbjct: 301 YIVLRAFSSSEAVTSLSWQRLKPVIVNEGNCTAEVALLGGAIEDSILMPDPLPSVTTSTI 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
            +STT+SSS NPGRSGPTFEASL ETSST +TAEETP+RSHL P GSLARLHAPRSSYNF
Sbjct: 361 PMSTTISSSWNPGRSGPTFEASLAETSSTFTTAEETPHRSHLWPLGSLARLHAPRSSYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPLS LF SS RRFSSIEDGA 
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLSMLFPSSNRRFSSIEDGAG 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIF+WK SSSKQDDSRSSSGQLGS+P  TLNSK+EDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFHWKSSSSKQDDSRSSSGQLGSSPTSTLNSKSEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLA--SSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDI 600
           QP+TLPSRF MLA  SSSSSQTSSS+ISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKD 
Sbjct: 541 QPMTLPSRFGMLASSSSSSSQTSSSLISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKD- 600

Query: 601 ITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSS 660
            TSQEVSLSIPEH STTAASLSLG RGT+GLSN DSP  +TMTLPRRFSTYAERLSTTSS
Sbjct: 601 ATSQEVSLSIPEHLSTTAASLSLGTRGTVGLSNPDSPWNTTMTLPRRFSTYAERLSTTSS 660

Query: 661 FSDGLPVSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           FSDGLPV SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGGSLQPQKALQ D Q
Sbjct: 661 FSDGLPVGSPKTKKMGSETREEVLNNLSKFDTLSVAESGILPAMNGGSLQPQKALQPDGQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLH+EILRQFHMQE+EMSSV SSILENQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHIEILRQFHMQEIEMSSVTSSILENQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLRDLLGS
Sbjct: 781 LIKEVKSLRKENQQLRDLLGS 800

[Close]

BLAST of Sed0004245 vs. ExPASy TrEMBL
Match: A0A6J1JX78 (protein NEDD1-like OS=Cucurbita maxima OX=3661 GN=LOC111489662 PE=4 SV=1)

HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 734/801 (91.64%), Postives = 764/801 (95.38%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPI G+DSGDNIEESI+SISFS+KVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPITGNDSGDNIEESIFSISFSSKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDL+LHNLASGAR  ELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLILHNLASGARATELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR+SRHLL TAGDDGTV LWDTTGRNPK+SWQKQHSAPTAGIGFSPSNDKTLA
Sbjct: 181 VLRVLDYSRISRHLLVTAGDDGTVLLWDTTGRNPKVSWQKQHSAPTAGIGFSPSNDKTLA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVG+DKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGMDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRAFS+SEAVTSLSWQRLKPVIVNEGNC AEVALLGGA+EDSILMPDPLPSVTTST+
Sbjct: 301 YIVLRAFSSSEAVTSLSWQRLKPVIVNEGNCTAEVALLGGAIEDSILMPDPLPSVTTSTI 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNF 420
            +STT+SSSRNPGRSGPTFEASL ETSST +TAEETP+RSHL P GSLARLHAPRSSYNF
Sbjct: 361 PMSTTISSSRNPGRSGPTFEASLAETSSTFTTAEETPHRSHLWPLGSLARLHAPRSSYNF 420

Query: 421 KDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDGAS 480
           KDDMEVFSPLVDVQPITPSLDKLWDD NG KKDHPFDKKPLS LF SS RRFSS EDGA 
Sbjct: 421 KDDMEVFSPLVDVQPITPSLDKLWDDQNGLKKDHPFDKKPLSMLFPSSNRRFSSTEDGAG 480

Query: 481 DHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQLR 540
           DHPIF+WK SSSKQDDSRSSSGQLGS+P  TLNSK+EDS+ITPPEAWGGEKLSDKFAQLR
Sbjct: 481 DHPIFHWKSSSSKQDDSRSSSGQLGSSPTSTLNSKSEDSSITPPEAWGGEKLSDKFAQLR 540

Query: 541 QPVTLPSRFSMLA--SSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDI 600
           QP+TLPSRF MLA  SSSSSQT SS+ISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKD 
Sbjct: 541 QPMTLPSRFGMLASSSSSSSQTPSSLISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKD- 600

Query: 601 ITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSS 660
            TSQEVSLSIPEH STTAASLSLG RGTIGLSN DSP  +TMTLPRRFSTYAERLSTTSS
Sbjct: 601 ATSQEVSLSIPEHLSTTAASLSLGTRGTIGLSNPDSPWTTTMTLPRRFSTYAERLSTTSS 660

Query: 661 FSDGLPVSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           FSDGLPV SPKTKKMGSETREEVLN+LSKFD LSV ESGILPAMNGGSLQPQKALQ DAQ
Sbjct: 661 FSDGLPVGSPKTKKMGSETREEVLNNLSKFDTLSVTESGILPAMNGGSLQPQKALQPDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTL+LFQRTLEETLDSFQRSIHDDMRNLH+EILRQFHMQE+EMSSV SSILENQAE
Sbjct: 721 QGNSFTLKLFQRTLEETLDSFQRSIHDDMRNLHIEILRQFHMQEIEMSSVTSSILENQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLRDLLGS
Sbjct: 781 LIKEVKSLRKENQQLRDLLGS 800

[Close]

BLAST of Sed0004245 vs. ExPASy TrEMBL
Match: A0A0A0KA83 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008800 PE=4 SV=1)

HSP 1 Score: 1422.5 bits (3681), Expect = 0.0e+00
Identity = 737/801 (92.01%), Postives = 761/801 (95.01%), Query Frame = 0


Query: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVA 60
           MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPG+QVNSVKWNHTNLVVA
Sbjct: 1   MNSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVA 60

Query: 61  SAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRI 120
           SAGDDKKISLWRKNGQSMGTIPIAG+DSGDNIEESI+SISF NKVSRYMCTGGSGHVVRI
Sbjct: 61  SAGDDKKISLWRKNGQSMGTIPIAGTDSGDNIEESIFSISFGNKVSRYMCTGGSGHVVRI 120

Query: 121 WDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQ 180
           WDLQRKRCIKWLRGH+NTITGAMYNCKDEHLASISLSGDL+LHNLASGAR AELKDPNEQ
Sbjct: 121 WDLQRKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLILHNLASGARAAELKDPNEQ 180

Query: 181 VLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLA 240
           VLRVLDYSR SRHLL TAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDK+ A
Sbjct: 181 VLRVLDYSRTSRHLLVTAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKSFA 240

Query: 241 SVGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300
           SVGLDKKLYT+DSGSRRPSSFI+YEAPFS+MAFRDDGLILAAGTSNGRVVFYDVRGKPEP
Sbjct: 241 SVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGLILAAGTSNGRVVFYDVRGKPEP 300

Query: 301 YIVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTV 360
           YIVLRA+S+SEAVTSLSWQRLKPVIVNE NC AEVALLGGA+EDSILMPDPLPSVTTST 
Sbjct: 301 YIVLRAYSSSEAVTSLSWQRLKPVIVNESNCTAEVALLGGAIEDSILMPDPLPSVTTSTG 360

Query: 361 ALSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGS--LARLHAPRSSY 420
            LS T S SRNPGRSG TFEASLTETSS+ STAEETP RSHLR GGS  LARLHAPRSSY
Sbjct: 361 PLSAT-SGSRNPGRSGSTFEASLTETSSSFSTAEETPLRSHLRSGGSLALARLHAPRSSY 420

Query: 421 NFKDDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDHPFDKKPLSSLFSSSGRRFSSIEDG 480
           NFKDDMEVFSPLVDVQPITPSLDKLWDDHNG KKD+PFDKKPLS LF SS RRFSSIEDG
Sbjct: 421 NFKDDMEVFSPLVDVQPITPSLDKLWDDHNGSKKDNPFDKKPLSMLFPSSSRRFSSIEDG 480

Query: 481 ASDHPIFNWKPSSSKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQ 540
           ASDHPIFNWK SSSKQDD RSSSGQLGSTPAPT+NSKNEDS+ITPPEAWGGEKLS+KFAQ
Sbjct: 481 ASDHPIFNWKSSSSKQDDIRSSSGQLGSTPAPTVNSKNEDSSITPPEAWGGEKLSEKFAQ 540

Query: 541 LRQPVTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYPNLRTKDI 600
           LRQP+TLPSRF MLASSSSSQTSSSMISGLQDPSSS+SQSSITSLTNLNFSYPNLRTKD 
Sbjct: 541 LRQPMTLPSRFGMLASSSSSQTSSSMISGLQDPSSSISQSSITSLTNLNFSYPNLRTKD- 600

Query: 601 ITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAERLSTTSS 660
            TSQEVSLSIPEHFSTTAASLSLG R  IGLSN DSPR STMTLPRRFSTYAERLSTTSS
Sbjct: 601 ATSQEVSLSIPEHFSTTAASLSLGTRVNIGLSNTDSPRPSTMTLPRRFSTYAERLSTTSS 660

Query: 661 FSDGLPVSSPKTKKMGSETREEVLNSLSKFDALSVNESGILPAMNGGSLQPQKALQTDAQ 720
           FSDGLP  SPKTKK+GSETREEVLN+L+KFD LSV ESGI PAMNGG LQPQK LQ+DAQ
Sbjct: 661 FSDGLPAGSPKTKKLGSETREEVLNNLAKFDTLSVTESGIPPAMNGGLLQPQKPLQSDAQ 720

Query: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVMSSILENQAE 780
           QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSV S+ILENQAE
Sbjct: 721 QGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSSVTSTILENQAE 780

Query: 781 LIKEVKSLRKENQQLRDLLGS 800
           LIKEVKSLRKENQQLRDLLGS
Sbjct: 781 LIKEVKSLRKENQQLRDLLGS 799

[Close]

BLAST of Sed0004245 vs. TAIR 10
Match: AT5G05970.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 858.6 bits (2217), Expect = 4.0e-249
Identity = 485/813 (59.66%), Postives = 587/813 (72.20%), Query Frame = 0


Query: 2   NSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVAS 61
           N  +PS  LLAAS GDTVKLFDVS    D GDPC LSYTPSPG  VNSVKWNHTNLVVAS
Sbjct: 4   NLVEPSWRLLAASGGDTVKLFDVSA---DSGDPCVLSYTPSPGCAVNSVKWNHTNLVVAS 63

Query: 62  AGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRIW 121
            G+DKKISLWRKNGQS+GT+P+ G D GD+ EE + +ISFS K SRY+C+GG+G +V+IW
Sbjct: 64  TGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIW 123

Query: 122 DLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQV 181
           DLQRK CIK L+GH++TITG MYNCKDEHLAS+S+ GDL++HNLASGAR  ELKDPN QV
Sbjct: 124 DLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQV 183

Query: 182 LRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLAS 241
           LR+LDYSR SRHLL TAGDDGTVHLWDTTGR+PK+SW KQHSAPTAG+ FSPSN+K +AS
Sbjct: 184 LRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS 243

Query: 242 VGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEPY 301
           VG+DKKLYT+DSGSRR SS I+YEAPFS++AF D+G IL AGTSNGRVVFYD+RGKP+P 
Sbjct: 244 VGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSNGRVVFYDIRGKPQPV 303

Query: 302 IVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTVA 361
            VL AFSNSE VTSLSWQ  KPVIVNE N  +E+ALLG  VEDS+++PDPLPS T S   
Sbjct: 304 TVLHAFSNSEDVTSLSWQTSKPVIVNEKNYTSEMALLGSTVEDSVVIPDPLPSTTPS--- 363

Query: 362 LSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNFK 421
                 S+  PG  G      ++ ++   S+ E+TP R+HL P G L RLHA R++ ++ 
Sbjct: 364 ---ASQSAMAPGSRG------VSASTVNASSVEQTPNRNHLWPSGPLGRLHALRANDSYN 423

Query: 422 DDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDH-PFDKKPLSSLFSSSGRRFSSIEDGAS 481
           DDM VFSP++DV     S++K  D      KDH   D KP S LF SS + +S  ++G+ 
Sbjct: 424 DDMGVFSPIIDVS----SVEKWADSEGYNNKDHLVVDNKPSSLLFPSSSKGYSFGDNGSK 483

Query: 482 DHPIFNWKPSS-SKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQL 541
           +HPIF+WKPSS SKQDD R++    GS   PT +SK+EDSA+TPPEAWGG+K S+KF QL
Sbjct: 484 EHPIFDWKPSSTSKQDDPRAAFSSFGSI-TPTASSKSEDSALTPPEAWGGDKFSEKFNQL 543

Query: 542 RQP--------VTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYP 601
                      +  PSR ++  SS+ + TS SM S  +D   S  Q   T+  N +  +P
Sbjct: 544 ANEKFSDKFSHLHAPSRLAV--SSTGASTSGSMFSSSRDFPLSHGQ---TNFANASLEFP 603

Query: 602 NLRTKDIITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAE 661
            +R  D  ++ E S +  ++      S  L  +G     N DS R+S     RRFSTYAE
Sbjct: 604 RIR--DFSSTFETSSTQTDN---NLPSSPLFTKGITAPGNIDSLRLSP-NFTRRFSTYAE 663

Query: 662 RLSTTSSFSDGLPVS---SPKTKKMGSETREEVLNS-LSKFDALSVNESGILPAMNGGSL 721
           R+STTSSFSDG  +S   SPK KK GSETREEVLN  L++ + +   E+G +P MNGG  
Sbjct: 664 RISTTSSFSDGASLSLGGSPKIKKTGSETREEVLNHLLARPETVVATEAGAMPLMNGG-- 723

Query: 722 QPQKALQTDAQQ---GNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEME 781
              K  QTD QQ    ++FTLQLFQRTLE TLDSFQ SIHDD+RNLH+EILRQFHM EME
Sbjct: 724 --LKQSQTDQQQVMGSSNFTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEME 781

Query: 782 MSSVMSSILENQAELIKEVKSLRKENQQLRDLL 798
           MS V+SSILENQAE +KE+K LRKENQ+LR  L
Sbjct: 784 MSKVLSSILENQAEQMKELKLLRKENQELRQRL 781

[Close]

BLAST of Sed0004245 vs. TAIR 10
Match: AT5G05970.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 858.2 bits (2216), Expect = 5.2e-249
Identity = 480/810 (59.26%), Postives = 584/810 (72.10%), Query Frame = 0


Query: 2   NSGDPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGFQVNSVKWNHTNLVVAS 61
           N  +PS  LLAAS GDTVKLFDVS    D GDPC LSYTPSPG  VNSVKWNHTNLVVAS
Sbjct: 4   NLVEPSWRLLAASGGDTVKLFDVSA---DSGDPCVLSYTPSPGCAVNSVKWNHTNLVVAS 63

Query: 62  AGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGSGHVVRIW 121
            G+DKKISLWRKNGQS+GT+P+ G D GD+ EE + +ISFS K SRY+C+GG+G +V+IW
Sbjct: 64  TGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIW 123

Query: 122 DLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAELKDPNEQV 181
           DLQRK CIK L+GH++TITG MYNCKDEHLAS+S+ GDL++HNLASGAR  ELKDPN QV
Sbjct: 124 DLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQV 183

Query: 182 LRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPSNDKTLAS 241
           LR+LDYSR SRHLL TAGDDGTVHLWDTTGR+PK+SW KQHSAPTAG+ FSPSN+K +AS
Sbjct: 184 LRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS 243

Query: 242 VGLDKKLYTFDSGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGRVVFYDVRGKPEPY 301
           VG+DKKLYT+DSGSRR SS I+YEAPFS++AF D+G IL AGTSNGRVVFYD+RGKP+P 
Sbjct: 244 VGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSNGRVVFYDIRGKPQPV 303

Query: 302 IVLRAFSNSEAVTSLSWQRLKPVIVNEGNCPAEVALLGGAVEDSILMPDPLPSVTTSTVA 361
            VL AFSNSE VTSLSWQ  KPVIVNE N  +E+ALLG  VEDS+++PDPLPS T S   
Sbjct: 304 TVLHAFSNSEDVTSLSWQTSKPVIVNEKNYTSEMALLGSTVEDSVVIPDPLPSTTPS--- 363

Query: 362 LSTTVSSSRNPGRSGPTFEASLTETSSTISTAEETPYRSHLRPGGSLARLHAPRSSYNFK 421
                 S+  PG  G      ++ ++   S+ E+TP R+HL P G L RLHA R++ ++ 
Sbjct: 364 ---ASQSAMAPGSRG------VSASTVNASSVEQTPNRNHLWPSGPLGRLHALRANDSYN 423

Query: 422 DDMEVFSPLVDVQPITPSLDKLWDDHNGQKKDH-PFDKKPLSSLFSSSGRRFSSIEDGAS 481
           DDM VFSP++DV     S++K  D      KDH   D KP S LF SS + +S  ++G+ 
Sbjct: 424 DDMGVFSPIIDVS----SVEKWADSEGYNNKDHLVVDNKPSSLLFPSSSKGYSFGDNGSK 483

Query: 482 DHPIFNWKPSS-SKQDDSRSSSGQLGSTPAPTLNSKNEDSAITPPEAWGGEKLSDKFAQL 541
           +HPIF+WKPSS SKQDD R++    GS   PT +SK+EDSA+TPPEAWGG+K S+KF QL
Sbjct: 484 EHPIFDWKPSSTSKQDDPRAAFSSFGSI-TPTASSKSEDSALTPPEAWGGDKFSEKFNQL 543

Query: 542 RQP--------VTLPSRFSMLASSSSSQTSSSMISGLQDPSSSVSQSSITSLTNLNFSYP 601
                      +  PSR ++  SS+ + TS SM S  +D   S  Q   T+  N +  +P
Sbjct: 544 ANEKFSDKFSHLHAPSRLAV--SSTGASTSGSMFSSSRDFPLSHGQ---TNFANASLEFP 603

Query: 602 NLRTKDIITSQEVSLSIPEHFSTTAASLSLGPRGTIGLSNQDSPRISTMTLPRRFSTYAE 661
            +R  D  ++ E S +  ++      S  L  +G     N DS R+S     RRFSTYAE
Sbjct: 604 RIR--DFSSTFETSSTQTDN---NLPSSPLFTKGITAPGNIDSLRLSP-NFTRRFSTYAE 663

Query: 662 RLSTTSSFSDGLPVS---SPKTKKMGSETREEVLNS-LSKFDALSVNESGILPAMNGGSL 721
           R+STTSSFSDG  +S   SPK KK GSETREEVLN  L++ + +   E+G +P MN G L
Sbjct: 664 RISTTSSFSDGASLSLGGSPKIKKTGSETREEVLNHLLARPETVVATEAGAMPLMNQGGL 723

Query: 722 QPQKALQTDAQQGNSFTLQLFQRTLEETLDSFQRSIHDDMRNLHLEILRQFHMQEMEMSS 781
           +  +  Q      ++FTLQLFQRTLE TLDSFQ SIHDD+RNLH+EILRQFHM EMEMS 
Sbjct: 724 KQSQTDQQQVMGSSNFTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSK 782

Query: 782 VMSSILENQAELIKEVKSLRKENQQLRDLL 798
           V+SSILENQAE +KE+K LRKENQ+LR  L
Sbjct: 784 VLSSILENQAEQMKELKLLRKENQELRQRL 782

[Close]

BLAST of Sed0004245 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-10
Identity = 67/293 (22.87%), Postives = 125/293 (42.66%), Query Frame = 0


Query: 47  VNSVKWNHTNLVVASAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVS 106
           ++ VK+++   ++ASA  DK + LW     S+      G  SG      I  +++S+  S
Sbjct: 46  ISCVKFSNDGNLLASASVDKTMILWSATNYSL-IHRYEGHSSG------ISDLAWSSD-S 105

Query: 107 RYMCTGGSGHVVRIWDLQRK-RCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNL 166
            Y C+      +RIWD +    C+K LRGH+N +    +N     + S S    + +  +
Sbjct: 106 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 165

Query: 167 ASGARTAELKDPNEQVLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAP 226
            +G     +K  +  +  V  +      L+ +A  DG+  +WD        +     S  
Sbjct: 166 KTGKCVRMIKAHSMPISSV--HFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA 225

Query: 227 TAGIGFSPSNDKTLASVGLDK--KLYTFDSG------SRRPSSFISYEAPFSTMAFRDDG 286
            +   FSP N K +    LD   KL  + +G      +   +      + FS      +G
Sbjct: 226 VSFAKFSP-NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSV----TNG 285

Query: 287 LILAAGTSNGRVVFYDVRGKPEPYIVLRAFSNSEAVTSLSWQRLKPVIVNEGN 331
             + +G+ +  V  +D++ +    I+ R   +++AV S+S   ++  I + GN
Sbjct: 286 KYIVSGSEDNCVYLWDLQAR---NILQRLEGHTDAVISVSCHPVQNEISSSGN 320

[Close]

BLAST of Sed0004245 vs. TAIR 10
Match: AT1G11160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.0e-10
Identity = 66/281 (23.49%), Postives = 117/281 (41.64%), Query Frame = 0


Query: 55  TNLVVASAGDDKKISLWRKNGQSMGTIPIAGSDSGDNIEESIYSISFSNKVSRYMCTGGS 114
           T+ ++ + GDD K++LW   G++   + + G  S       + S++F N     +  G S
Sbjct: 27  TSRLLLTGGDDYKVNLW-SIGKTTSPMSLCGHTS------PVDSVAF-NSEEVLVLAGAS 86

Query: 115 GHVVRIWDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLASGARTAEL 174
             V+++WDL+  + ++   GH +  +   ++   E LAS S   +L + +          
Sbjct: 87  SGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTY 146

Query: 175 KDPNEQVLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPKISWQKQHSAPTAGIGFSPS 234
           K  + + +  +++S   R ++ + G D  V +WD T     +   K H  P   + F P 
Sbjct: 147 KG-HTRGISTIEFSPDGRWVV-SGGLDNVVKVWDLTA-GKLLHEFKCHEGPIRSLDFHPL 206

Query: 235 NDKTLASVGLDK-----KLYTFD-SGSRRPSSFISYEAPFSTMAFRDDGLILAAGTSNGR 294
            +  LA+   D+      L TF+  G+ RP +          +AF  DG  L  G  +G 
Sbjct: 207 -EFLLATGSADRTVKFWDLETFELIGTTRPEA-----TGVRAIAFHPDGQTLFCGLDDGL 266

Query: 295 VVFYDVRGKPEPYIVLRAFSNSEAVTSLSWQRLKPVIVNEG 330
            V+       EP I             + W  L    +NEG
Sbjct: 267 KVY-----SWEPVICRDG-------VDMGWSTLGDFCINEG 278

[Close]

BLAST of Sed0004245 vs. TAIR 10
Match: AT5G16750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 63.5 bits (153), Expect = 8.6e-10
Identity = 35/149 (23.49%), Postives = 70/149 (46.98%), Query Frame = 0


Query: 107 RYMCTGGSGHVVRIWDLQRKRCIKWLRGHSNTITGAMYNCKDEHLASISLSGDLLLHNLA 166
           + + + G    +R+WDL+  +CI+  +GH   + G   +     LA+      +L+ ++ 
Sbjct: 73  KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD 132

Query: 167 SGARTAELKDPNEQVLRVLDYSRMSRHLLATAGDDGTVHLWDTTGRNPK---ISWQKQHS 226
            G  T   +     V  +L +   ++++L +  DD TV +WD   +N +   ++  ++H 
Sbjct: 133 GGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHF 192

Query: 227 APTAGIGFSPSNDKTLASVGLDKKLYTFD 253
           +    I  S  +  TL S G DK +  +D
Sbjct: 193 SAVTSIALS-EDGLTLFSAGRDKVVNLWD 220

The following BLAST results are available for this feature:

BLAST of Sed0004245 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537038.1	0.0e+00	92.63	protein NEDD1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990911.1	0.0e+00	92.63	protein NEDD1 [Cucurbita maxima]	[more]
KAG6602643.1	0.0e+00	92.26	Protein NEDD1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038886298.1	0.0e+00	92.13	protein NEDD1 isoform X1 [Benincasa hispida]	[more]
XP_022960476.1	0.0e+00	92.38	protein NEDD1 [Cucurbita moschata]	[more]

BLAST of Sed0004245 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H5K9	7.3e-248	59.26	Protein NEDD1 OS=Arabidopsis thaliana OX=3702 GN=NEDD1 PE=2 SV=1	[more]
Q8NHV4	3.0e-39	23.76	Protein NEDD1 OS=Homo sapiens OX=9606 GN=NEDD1 PE=1 SV=1	[more]
Q3B7M6	1.9e-38	25.13	Protein NEDD1 OS=Bos taurus OX=9913 GN=NEDD1 PE=2 SV=1	[more]
P33215	2.3e-36	24.88	Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1 PE=1 SV=2	[more]
Q4V7Y7	1.4e-12	23.06	Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis OX=8355 GN=katnb...	[more]

BLAST of Sed0004245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JP94	0.0e+00	92.63	protein NEDD1 OS=Cucurbita maxima OX=3661 GN=LOC111487660 PE=4 SV=1	[more]
A0A6J1H7Q0	0.0e+00	92.38	protein NEDD1 OS=Cucurbita moschata OX=3662 GN=LOC111461198 PE=4 SV=1	[more]
A0A6J1FHX7	0.0e+00	91.76	protein NEDD1-like OS=Cucurbita moschata OX=3662 GN=LOC111445500 PE=4 SV=1	[more]
A0A6J1JX78	0.0e+00	91.64	protein NEDD1-like OS=Cucurbita maxima OX=3661 GN=LOC111489662 PE=4 SV=1	[more]
A0A0A0KA83	0.0e+00	92.01	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]

BLAST of Sed0004245 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05970.1	4.0e-249	59.66	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G05970.2	5.2e-249	59.26	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	1.3e-10	22.87	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G11160.1	5.0e-10	23.49	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G16750.1	8.6e-10	23.49	Transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 584..611
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 472..491
None	No IPR available	PANTHER	PTHR45096:SF1	PROTEIN NEDD1	coord: 1..611
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 23..63 e-value: 1.5 score: 15.8 coord: 66..104 e-value: 2.4 score: 14.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 1..19 score: 9.572741
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..145 e-value: 6.1E-21 score: 76.9
IPR044621	Protein NEDD1	PANTHER	PTHR45096	PROTEIN NEDD1	coord: 1..611
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 4..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004245.1	Sed0004245.1	mRNA
Sed0004245.2	Sed0004245.2	mRNA
Sed0004245.3	Sed0004245.3	mRNA
Sed0004245.4	Sed0004245.4	mRNA
Sed0004245.5	Sed0004245.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000919	cell plate assembly
biological_process	GO:0009553	embryo sac development
biological_process	GO:0009555	pollen development
biological_process	GO:0032467	positive regulation of cytokinesis
biological_process	GO:0010968	regulation of microtubule nucleation
biological_process	GO:0060236	regulation of mitotic spindle organization
biological_process	GO:2000694	regulation of phragmoplast microtubule organization
cellular_component	GO:0005828	kinetochore microtubule
molecular_function	GO:0140496	gamma-tubulin complex binding
molecular_function	GO:0005515	protein binding