Sed0004238 (gene) Chayote v1

Overview


Name	Sed0004238
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function (DUF1118)
Location	LG01: 17343349 .. 17344441 (-)
RNA-Seq Expression	Sed0004238
Synteny	Sed0004238

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAGAGTAAACTTTTCTTATTAAATTGAAGCATTAAAAATGATACATTTACAAAAATGGAAAAGTTTATGCTTCACAACATTTATAAACTCACCAATAAAACGAGCACACGTGGATGATAATCCAATATCTCAAATACTCAAAGACCAATCCAAACACCTTCCTTCTCCATCATTCATTTCCCCGGTGCGGGTCTCTGCAATTCACTCATTTTGCCCTAATCGCCGCCATTGTTAACACTCACACAGAGCTCTACCAAGGAACTCACGGACATGGCGGTCGCATCTTTCTGCACCAGCAGCAGCAGCAGCCGAGCAGCTTCACTCATCTACTCCATGGCCGCCGAGAAACCCTCCATTTCCGCCGCCAAAACCGTCGGCTCCAAGAAGGTCAGTCTCATTTTCTTCCTCCGAATCTGAATCGCTAAATCCGAGTCTGATAGCGCGGAAACATTGTGCAGATAAACACGACGGTGTTCCCGCTCGGGGAGAAAGGACCGAGGAGCGGCGTCTCGCTCTCGACCTCGCCTCCGATCAAGCTTCTGACTAGAGTGGAGCAGTTGAAGCTGCTGAGCAAGGCGGAGAAGGCCGGGCTGCTGTCGGCGGCGGAGAAGGCGGGGCTGTCCCTGTCGTCGATCGAGAAGTTAGGGCTTCTGTCGAAGGCGGAGGAATTGGGGGTTTTATCGGCGGCGACGGATCCGGGAACGCCGGGGGCGCTGCTGAGCCTAGGGTTAGGGCTGTTGCTTTTAGGGCCTTCGTGTGTGTATTTGGTGCCGGAGGACAGTGTTTGGGAAATCGCGTTGCAGGCGGCGGTGGCGCTCGTCTCCGTCGTCGGCGGCTCTGCGGCCTTTGCTGCCTCCAATTTGGTTTCTAATTTGCAGAGATCGAGTTGAATTCCGGCCGGTCATGGAGTTTTCCGGCCATCTCTCTGTATCATCCTTTCGGTATCTCTCTTTGTCGTTTTGTGTTCCGCTATTATTTTTATTTTTATCGTTTTCTATCGGATTAAAATAGTGAATTTGTGAATGCAAATATTCTGCTCTCTATATTATACCAAAATCGATTTGGTGACACAATTAAAAAAGGACACATTT

mRNA sequence

GACAGAGTAAACTTTTCTTATTAAATTGAAGCATTAAAAATGATACATTTACAAAAATGGAAAAGTTTATGCTTCACAACATTTATAAACTCACCAATAAAACGAGCACACGTGGATGATAATCCAATATCTCAAATACTCAAAGACCAATCCAAACACCTTCCTTCTCCATCATTCATTTCCCCGGTGCGGGTCTCTGCAATTCACTCATTTTGCCCTAATCGCCGCCATTGTTAACACTCACACAGAGCTCTACCAAGGAACTCACGGACATGGCGGTCGCATCTTTCTGCACCAGCAGCAGCAGCAGCCGAGCAGCTTCACTCATCTACTCCATGGCCGCCGAGAAACCCTCCATTTCCGCCGCCAAAACCGTCGGCTCCAAGAAGATAAACACGACGGTGTTCCCGCTCGGGGAGAAAGGACCGAGGAGCGGCGTCTCGCTCTCGACCTCGCCTCCGATCAAGCTTCTGACTAGAGTGGAGCAGTTGAAGCTGCTGAGCAAGGCGGAGAAGGCCGGGCTGCTGTCGGCGGCGGAGAAGGCGGGGCTGTCCCTGTCGTCGATCGAGAAGTTAGGGCTTCTGTCGAAGGCGGAGGAATTGGGGGTTTTATCGGCGGCGACGGATCCGGGAACGCCGGGGGCGCTGCTGAGCCTAGGGTTAGGGCTGTTGCTTTTAGGGCCTTCGTGTGTGTATTTGGTGCCGGAGGACAGTGTTTGGGAAATCGCGTTGCAGGCGGCGGTGGCGCTCGTCTCCGTCGTCGGCGGCTCTGCGGCCTTTGCTGCCTCCAATTTGGTTTCTAATTTGCAGAGATCGAGTTGAATTCCGGCCGGTCATGGAGTTTTCCGGCCATCTCTCTGTATCATCCTTTCGGTATCTCTCTTTGTCGTTTTGTGTTCCGCTATTATTTTTATTTTTATCGTTTTCTATCGGATTAAAATAGTGAATTTGTGAATGCAAATATTCTGCTCTCTATATTATACCAAAATCGATTTGGTGACACAATTAAAAAAGGACACATTT

Coding sequence (CDS)

ATGGCGGTCGCATCTTTCTGCACCAGCAGCAGCAGCAGCCGAGCAGCTTCACTCATCTACTCCATGGCCGCCGAGAAACCCTCCATTTCCGCCGCCAAAACCGTCGGCTCCAAGAAGATAAACACGACGGTGTTCCCGCTCGGGGAGAAAGGACCGAGGAGCGGCGTCTCGCTCTCGACCTCGCCTCCGATCAAGCTTCTGACTAGAGTGGAGCAGTTGAAGCTGCTGAGCAAGGCGGAGAAGGCCGGGCTGCTGTCGGCGGCGGAGAAGGCGGGGCTGTCCCTGTCGTCGATCGAGAAGTTAGGGCTTCTGTCGAAGGCGGAGGAATTGGGGGTTTTATCGGCGGCGACGGATCCGGGAACGCCGGGGGCGCTGCTGAGCCTAGGGTTAGGGCTGTTGCTTTTAGGGCCTTCGTGTGTGTATTTGGTGCCGGAGGACAGTGTTTGGGAAATCGCGTTGCAGGCGGCGGTGGCGCTCGTCTCCGTCGTCGGCGGCTCTGCGGCCTTTGCTGCCTCCAATTTGGTTTCTAATTTGCAGAGATCGAGTTGA

Protein sequence

MAVASFCTSSSSSRAASLIYSMAAEKPSISAAKTVGSKKINTTVFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRSS

Homology

[Close]

BLAST of Sed0004238 vs. NCBI nr
Match: XP_008451074.1 (PREDICTED: uncharacterized protein LOC103492437 [Cucumis melo] >TYJ98942.1 hypothetical protein E5676_scaffold248G001430 [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 166/199 (83.42%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIY-----------------SMAAEKPSISAAKTVGSKKINTT 60
           M V SFC  SSS+RAAS IY                 SMAAEKP  SA+KTVGSKKINTT
Sbjct: 1   MEVTSFC--SSSTRAASFIYSYPSTTTSRRKRPLHLHSMAAEKPPPSASKTVGSKKINTT 60

Query: 61  VFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120
           VFPLGEKGPRS +SLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL
Sbjct: 61  VFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120

Query: 121 LSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVV 180
           LSKAEELGVLSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQ AVALVS+V
Sbjct: 121 LSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALVSIV 180

Query: 181 GGSAAFAASNLVSNLQRSS 183
           GGSAAFAASNLVSNLQRS+
Sbjct: 181 GGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Sed0004238 vs. NCBI nr
Match: XP_004137438.1 (uncharacterized protein LOC101204037 [Cucumis sativus] >KGN64060.1 hypothetical protein Csa_013877 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 2.7e-70
Identity = 166/199 (83.42%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIY-----------------SMAAEKPSISAAKTVGSKKINTT 60
           M V SFC  SSS+RAAS IY                 SMA EKP  SAAKTVGSKKINTT
Sbjct: 1   MEVTSFC--SSSTRAASFIYSYPSTTTSRRKRPLHLHSMATEKPLPSAAKTVGSKKINTT 60

Query: 61  VFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120
           VFPLGEKGPRS +SLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL
Sbjct: 61  VFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120

Query: 121 LSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVV 180
           LSKAEELGVLSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQ AVALVS+V
Sbjct: 121 LSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALVSIV 180

Query: 181 GGSAAFAASNLVSNLQRSS 183
           GGSAAFAASNLVSNLQRS+
Sbjct: 181 GGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Sed0004238 vs. NCBI nr
Match: XP_038893804.1 (uncharacterized protein LOC120082623 [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 3.0e-69
Identity = 161/195 (82.56%), Postives = 174/195 (89.23%), Query Frame = 0


Query: 1   MAVASFCTSS------------SSSRAASL-IYSMAAEKPSISAAKTVGSKKINTTVFPL 60
           M V+SFC+SS            ++SR  SL ++SMAAEKP  SAAKTVGSKKIN+TVFPL
Sbjct: 1   MEVSSFCSSSRAASFVFSYPSKTNSRKRSLHLHSMAAEKPPPSAAKTVGSKKINSTVFPL 60

Query: 61  GEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKA 120
           GEKGPR+ +SLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKA
Sbjct: 61  GEKGPRTSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKA 120

Query: 121 EELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVVGGSA 180
           EELG+LSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVW+IALQ +VALVSVVGGSA
Sbjct: 121 EELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWQIALQVSVALVSVVGGSA 180

Query: 181 AFAASNLVSNLQRSS 183
           AFAASNLVSNLQRS+
Sbjct: 181 AFAASNLVSNLQRSN 195

[Close]

BLAST of Sed0004238 vs. NCBI nr
Match: XP_022137623.1 (uncharacterized protein LOC111009021 [Momordica charantia])

HSP 1 Score: 267.7 bits (683), Expect = 7.3e-68
Identity = 162/201 (80.60%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MAVASFCTSS-------------------SSSRAASLIYSMAAEKPSISAAKTVGSKKIN 60
           M V SFC+SS                    S+ +  L+ SMAAEKP  SAAKTVGSKKIN
Sbjct: 1   MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKIN 60

Query: 61  TTVFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKL 120
           +TVFPLGEKGPRS +SLSTSP IKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKL
Sbjct: 61  STVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKL 120

Query: 121 GLLSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVS 180
           GLLSKAEELGVLSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQAAVALVS
Sbjct: 121 GLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVS 180

Query: 181 VVGGSAAFAASNLVSNLQRSS 183
           VVGGSAAFAASNLVSNLQRS+
Sbjct: 181 VVGGSAAFAASNLVSNLQRSN 201

[Close]

BLAST of Sed0004238 vs. NCBI nr
Match: XP_023541355.1 (uncharacterized protein LOC111801557 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 6.2e-67
Identity = 160/204 (78.43%), Postives = 169/204 (82.84%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIYS----------------------MAAEKPSISAAKTVGSK 60
           M +AS    +SS+RAAS IYS                      MAAEKP  SA KT+GSK
Sbjct: 1   MEIASL---TSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSK 60

Query: 61  KINTTVFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSI 120
           KIN+TVFPLGEKGPRS +SLSTSPPIKLLTRVEQL+LLSKAEKAGLLSAAEKAGLSLSSI
Sbjct: 61  KINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSI 120

Query: 121 EKLGLLSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVA 180
           EKLGLLSKAEELG+LSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQAA A
Sbjct: 121 EKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAA 180

Query: 181 LVSVVGGSAAFAASNLVSNLQRSS 183
           LVSVVGGSAAFAASNLVSNLQRS+
Sbjct: 181 LVSVVGGSAAFAASNLVSNLQRSN 201

[Close]

BLAST of Sed0004238 vs. ExPASy TrEMBL
Match: A0A5D3BGQ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001430 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.7e-71
Identity = 166/199 (83.42%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIY-----------------SMAAEKPSISAAKTVGSKKINTT 60
           M V SFC  SSS+RAAS IY                 SMAAEKP  SA+KTVGSKKINTT
Sbjct: 1   MEVTSFC--SSSTRAASFIYSYPSTTTSRRKRPLHLHSMAAEKPPPSASKTVGSKKINTT 60

Query: 61  VFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120
           VFPLGEKGPRS +SLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL
Sbjct: 61  VFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120

Query: 121 LSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVV 180
           LSKAEELGVLSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQ AVALVS+V
Sbjct: 121 LSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALVSIV 180

Query: 181 GGSAAFAASNLVSNLQRSS 183
           GGSAAFAASNLVSNLQRS+
Sbjct: 181 GGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Sed0004238 vs. ExPASy TrEMBL
Match: A0A1S3BQ40 (uncharacterized protein LOC103492437 OS=Cucumis melo OX=3656 GN=LOC103492437 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.7e-71
Identity = 166/199 (83.42%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIY-----------------SMAAEKPSISAAKTVGSKKINTT 60
           M V SFC  SSS+RAAS IY                 SMAAEKP  SA+KTVGSKKINTT
Sbjct: 1   MEVTSFC--SSSTRAASFIYSYPSTTTSRRKRPLHLHSMAAEKPPPSASKTVGSKKINTT 60

Query: 61  VFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120
           VFPLGEKGPRS +SLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL
Sbjct: 61  VFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120

Query: 121 LSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVV 180
           LSKAEELGVLSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQ AVALVS+V
Sbjct: 121 LSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALVSIV 180

Query: 181 GGSAAFAASNLVSNLQRSS 183
           GGSAAFAASNLVSNLQRS+
Sbjct: 181 GGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Sed0004238 vs. ExPASy TrEMBL
Match: A0A0A0LQ98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039250 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.3e-70
Identity = 166/199 (83.42%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIY-----------------SMAAEKPSISAAKTVGSKKINTT 60
           M V SFC  SSS+RAAS IY                 SMA EKP  SAAKTVGSKKINTT
Sbjct: 1   MEVTSFC--SSSTRAASFIYSYPSTTTSRRKRPLHLHSMATEKPLPSAAKTVGSKKINTT 60

Query: 61  VFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120
           VFPLGEKGPRS +SLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL
Sbjct: 61  VFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGL 120

Query: 121 LSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVV 180
           LSKAEELGVLSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQ AVALVS+V
Sbjct: 121 LSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALVSIV 180

Query: 181 GGSAAFAASNLVSNLQRSS 183
           GGSAAFAASNLVSNLQRS+
Sbjct: 181 GGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Sed0004238 vs. ExPASy TrEMBL
Match: A0A6J1CAU4 (uncharacterized protein LOC111009021 OS=Momordica charantia OX=3673 GN=LOC111009021 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.6e-68
Identity = 162/201 (80.60%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MAVASFCTSS-------------------SSSRAASLIYSMAAEKPSISAAKTVGSKKIN 60
           M V SFC+SS                    S+ +  L+ SMAAEKP  SAAKTVGSKKIN
Sbjct: 1   MEVTSFCSSSRGISFVYSYPWKTKSRFDNPSTVSPLLVRSMAAEKPLPSAAKTVGSKKIN 60

Query: 61  TTVFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKL 120
           +TVFPLGEKGPRS +SLSTSP IKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKL
Sbjct: 61  STVFPLGEKGPRSSISLSTSPQIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKL 120

Query: 121 GLLSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVS 180
           GLLSKAEELGVLSAATDPGTPGALLSL LGLLLLGPSCVYLVPEDSVWEI LQAAVALVS
Sbjct: 121 GLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAVALVS 180

Query: 181 VVGGSAAFAASNLVSNLQRSS 183
           VVGGSAAFAASNLVSNLQRS+
Sbjct: 181 VVGGSAAFAASNLVSNLQRSN 201

[Close]

BLAST of Sed0004238 vs. ExPASy TrEMBL
Match: A0A6J1K230 (uncharacterized protein LOC111490350 OS=Cucurbita maxima OX=3661 GN=LOC111490350 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.1e-67
Identity = 160/204 (78.43%), Postives = 169/204 (82.84%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIYS----------------------MAAEKPSISAAKTVGSK 60
           M VAS    +SS+RAAS IYS                      MAAEKP  SA KT+GSK
Sbjct: 1   MEVASL---TSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSK 60

Query: 61  KINTTVFPLGEKGPRSGVSLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSI 120
           KIN+TVFPLGEKGPRS +SLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSI
Sbjct: 61  KINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSI 120

Query: 121 EKLGLLSKAEELGVLSAATDPGTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVA 180
           EKLGLLSKAEELG+LSAATDPGTPGALLSL LGLLLLGPSCVYLVPED+VWEI LQAA A
Sbjct: 121 EKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDTVWEIVLQAAAA 180

Query: 181 LVSVVGGSAAFAASNLVSNLQRSS 183
           LVSV+GGSAAFAASNLVSNLQRS+
Sbjct: 181 LVSVMGGSAAFAASNLVSNLQRSN 201

[Close]

BLAST of Sed0004238 vs. TAIR 10
Match: AT5G08050.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-40
Identity = 106/182 (58.24%), Postives = 127/182 (69.78%), Query Frame = 0


Query: 1   MAVASFCTSSSSSRAASLIYSMAAEKPSISAA-KTVGSKKINTTVFPLGEKGPRSGVSLS 60
           MA    C+S +       ++SMA +KPS SAA +T+ SKK   T                
Sbjct: 1   MAAKLICSSLT-------VHSMANKKPSPSAATRTITSKKSTAT---------------- 60

Query: 61  TSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATDP 120
             P +KLLTRVEQLKLL+KAEKAGLLS AEK+G SLS+IE+LGLL+KAEE GVLSAAT+P
Sbjct: 61  --PQVKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNP 120

Query: 121 GTPGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVVGGSAAFAASNLVSNLQ 180
            TPG L +L LGLLLLGP   Y+VPED  WE+ +Q  VAL+SV+GGSAAFAAS  VSNLQ
Sbjct: 121 ETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGFVSNLQ 157

Query: 181 RS 182
           +S
Sbjct: 181 KS 157

[Close]

BLAST of Sed0004238 vs. TAIR 10
Match: AT1G74730.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-10
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 64  IKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGVLSAATD-PGT- 123
           + +  ++E+ K+LS  EK+GLLS AE  GL+LSS+EKL + SKAE+LG+LS   +  GT 
Sbjct: 78  VDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLENLAGTS 137

Query: 124 PGALLSLGLGLLLLGPSCVYLVPEDSVWEIALQAAVALVSVVGGSAAFAASNLVSNLQRS 182
           P  L S  L  L      V L+P+DS   +  QA +A    + G      S ++  LQ +
Sbjct: 138 PAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALALTGVVLLVGSVVLDGLQEA 197

The following BLAST results are available for this feature:

BLAST of Sed0004238 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451074.1	1.6e-70	83.42	PREDICTED: uncharacterized protein LOC103492437 [Cucumis melo] >TYJ98942.1 hypot...	[more]
XP_004137438.1	2.7e-70	83.42	uncharacterized protein LOC101204037 [Cucumis sativus] >KGN64060.1 hypothetical ...	[more]
XP_038893804.1	3.0e-69	82.56	uncharacterized protein LOC120082623 [Benincasa hispida]	[more]
XP_022137623.1	7.3e-68	80.60	uncharacterized protein LOC111009021 [Momordica charantia]	[more]
XP_023541355.1	6.2e-67	78.43	uncharacterized protein LOC111801557 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0004238 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0004238 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGQ3	7.7e-71	83.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BQ40	7.7e-71	83.42	uncharacterized protein LOC103492437 OS=Cucumis melo OX=3656 GN=LOC103492437 PE=...	[more]
A0A0A0LQ98	1.3e-70	83.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039250 PE=4 SV=1	[more]
A0A6J1CAU4	3.6e-68	80.60	uncharacterized protein LOC111009021 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1K230	5.1e-67	78.43	uncharacterized protein LOC111490350 OS=Cucurbita maxima OX=3661 GN=LOC111490350...	[more]

BLAST of Sed0004238 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08050.1	1.4e-40	58.24	Protein of unknown function (DUF1118)	[more]
AT1G74730.1	7.4e-10	39.17	Protein of unknown function (DUF1118)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 69..181 e-value: 9.6E-48 score: 161.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004238.1	Sed0004238.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090391	granum assembly
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009515	granal stacked thylakoid
cellular_component	GO:0016021	integral component of membrane