Sed0004226 (gene) Chayote v1

Overview


Name	Sed0004226
Type	gene
Organism	Sechium edule (Chayote v1)
Description	reactive Intermediate Deaminase A, chloroplastic-like
Location	LG07: 33318762 .. 33336285 (+)
RNA-Seq Expression	Sed0004226
Synteny	Sed0004226

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTGATGGTTGTCAGCAACCAATATCTCAAAGAGAAAAAATTCTGTGCTTCTCAGTGCTATTTGCGAAGAGTGAGAAGGAAAGCAAGACCTAGACGATCATGGCTTGGTGCGCGGCTCGAACCTTTCACATGCCGGCGTTGGACATCACTGCATTGCGCTCCAAGACGCCCTTGGCCCTCGGCGTCGGTTGCGCTTCGGTGGCCGGAACTACCTTGTGGCGATCTCCCAAACGCCAAATTCCCTTCGCATCCCTCGGCATTTCTACCAATGCTAGTACGCCTTCCATTCTCTTTGCTCGCCGCTTCATTTCAACTATGTAGGTTTTACTCTTATTTAGCCAAAACCTCGATGGACTATGTAGGGTTTAGTTTGTGTTTCGTCTGAGTAGTTATTAGAATTTCGAAATCTGGCCTTTCATTGCGATTAGGTTTAAGCTTGGTGGTGAAATGTACAAAGTGGGATTGGAGCTTTGCTCCACTCTACCTCGGTAACTGTTAGGATCTCACAAATATCCCACATTGGAAAGTGGGAGAGTTAACATCAATATAAAAGAGATATGAGTTATTCCCCTTATTGTCAATTGGTTTTGAGGTAGAACCCCATATTCTCTAATAGTAACCATGCCTGTCCCCAGGCCAGACATCAGGAAACATGGAAGGAATAGAGATGTGACAATAGAGATGTGATAGGTATCTACAAATTAATGTGTGAATGTTGAATTTGGGACCTTGAGGAGAGCACATGCATCAAAGCCTAAGTTTTTAATTACTGTGCCACCCCTGACATCCTAGTATATTGGTGTCCTTTCCCTTCTCTTTGCAAATGTAGTACGCAATCTATTGGAGAAGGGACAGTTGGCGAGCTAGGCTATTTTTTTTGGTCATTTTGGTGCCTTTTTCTATGAATGTGTTGGATCCTTTCTTATAGAAAAAGAAAAAAAAGTAATGTCTGAAGAATCAACTTTCCTTTCTCATTGTTTTGGTTGAGTGTTTATAACAGATGCATAACCACCCTTGATATCAACTTCTTGTGCGGCAGGTATCAGGGAAGCTGTAAATACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCGCAGGGTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCTGAGGTAGCTTCATGACTTTAGTATTCTTATTTTTGTTTGATTGTGCTTTTGAGTTGATTACGAGCATGTTTAATTTTGAAAGGACCAAAATTACTTATGTCATCACTCCTGCCACTTTTAGTGGAAAAAGAGCCTGACAAAAAACTATTTTGGCTATTCCAAAATCTCTCCCAAACATGGCAAGCATAGCTTGAAAGGTTGAATACTTTTCAATATTTGTATGTAAAAAGGGGAGGATGAAGTGGGTTTCTCATTTCATCATGCTGCCTAATAGAATGTGTATCCTCATGTTCCAATGCAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACTGAGCAGGTATATTCATTGAGTAGTAGGGTAGTACCTGCTTGGCTGCTCGTATCCTGTCTATGTACATTAAAATTTTGAGCTGAATATAAAACATTTAAGTTAATGAAATTTGCAGGTCCTAAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTCAAGACAACTATTATGTATGAACTTTTTGCCTCTTCTCTGTGACCATAATATCTTTGCTCTATAATCTTAATGTCTGAAGAACTTGGGAGGAGCTCTTGGTAGTAATTTTAATAATGATTTTTTTTCTTCCTTTTCTACTTTTAAAAACATATTTTGAGTGATTTATTATAGTTAAGATTATTGTCCACAAAAAAAACTATTTAAAAGTTATTCTACTAGGTTCTATTTACTCATTTTTATAGATTAAATCTTTATAATATTTTTCACAATAAGATTAAATTGTTACATATTTTAAAGGTTAAAATACCATTTTGGTCCCTCAACTTTAAAGGTTAAAAGAACAAAGTTGAGGGACCAAAATTGGACAAATAACAAAGTCAAGGGATCAAAATTGGACATTTGAAAGTCCAAGCACCAAAATGGAACAAACTCCAAAGTCGTGGGACCAAAATGGTATTTTAACCTATTTTAAAATATAAAGACTAAATTATTACATATTATAGTTTAGGGACCAAATACTATTAAAAGTACATGGACTAAATTGTTACAAAACCCAAGTTTAGAGACTAAATTGCTATTTTTATGAAAGTTCAGGGGACCAAAAATGCACTTGAACCTTCAATAAATAATCATTCTCAAAGTATTGAAGGAGTACTTCCGAACACGCATGTTTTTTCTGTGATTCAGCTCTTTCTTCGCAATTCTTTCTTGCAGGTTGGCTGATCTGAAGGATTTCAAGAAAGTAAATGAGATTTATGGTAAATGTAAGTTTGTTTAACCTTCAATCTCTCTCTCTTATCTACTGTTGAGCAACATTCTCATCACAGTTCAACTTTAGTTTCACGAATATAGTTTTTTGAGTGAGTTAGGAAATTACAACTTCAATGAATTTTCTACTTGGACAAAGAGATGAACTTTTATTTTTAAACAAAAAGAAATGATGAACACTTCTTTTTTTAAAAAAAAAACAAAAGATGAACTTTTTTTTAACTATTTATCTGGCCGTGTGAATGGCCGTGTGAATGTTAGGATGTGACACTAACAAACAAACAAAAAATAAACTACAATGCATAATCATATCAGTTCTAAAAATAACCTGTATTGCATATCAATAGAAATAGCAATGTTTAATAGTTTTTTTGAGATGGTTCTCTTCCAAAGTCCCCACATTGAGACATTAAAATAATGATTCCCCGTCTTAGAACCCTTACAAATGACTCATTTTCAAGAATAGTTGAGATAAGGGGTTCTGTAGGAAAGGGCTCAAATTCCTTTGTATTCTTCCTCTGAATTTGAGATTTGGTGCAGAAGGGTTCGTTTTCAAAGAAAATGACGTCCATGGATGTGTACATTTTCCTAGTGATTAGGGAAAAGCATTTGTGTACCCCTTGTTGTGAGATGCATACCTTTGGAAAATGCACTTAGGATGTGTTTGAGCACCAAGAATAAGGAGGAGAATGGGAATGGGGATGATTCCCCCTGTTTAGGCCATCGAGAATCATTCTCCCCATAATCGCGTTTTCCAAAAACACTCTTTTCATTCTCCTCCTAACTACTTTTTATTCTCTCTCCAACAACTTTTTATGCATCACATAACTATTTTTCACTCTCATCCTACTCATTAGTTTATTTTTCCCATAATCATTCCCTTCACCCAAACACAAATAATCATTTTCATCATCCCAAACACAAATAATCATTCTCATCATCCCAAACACAAATAATCAGTCTCTTCATCCCAAACACAAATAATCAGTCTCTTCATCCCAAACACAAATAATCATCTCCCCATAATTATTATCTTTCATATTCTCTCCCTAATTCCCATTACCCCCATAATCATTATTATTTCCCTTCCCTCAAGCACACCATTAATTGCTTTCAGATCAAGTTTGAACTTTTGAGGAGAATGGTTAGGACAAAAGAAGAGCAACCTAACACGCGAAGAGGTGAGATTAAAGAGAGGTTTTGGAATTGAGGATGAATTTGGATTAGGACGTCATGGGGGGATTTAAAGGCGAGGACGCGGCTGGGCAAACGATTTATGAGAAAGGTGGCAGTGAGGATAGCTTCCCCCAAAAATGCTTTGGGACATTGGAGGAAAACTGAGAGAGCAAGCTACCTTAAGGAGATGTCTGTTTTTCCTTTTGGCAATACCATTTTGTTGAGGAGTGTCCACACATGAACTGGTGTGAACAATGCCATGAGATAAGAGTTATGGTCCAAGACTGGAATTAAAATAGTCTCGAGCGTTGTTTGTTCTAAACACTTGGATTTTACTCCCAAATTGATTTGAAATCATGGCAAGGAAGGAACGATAGAGGTTGGAAGTTTCAGATTTTTCTTTCCTTGGGAAGGTCCAAGTCATTCTAGTGGTCATCAATAAATGTGAAAAACGTGATTTTGGGGGGAATGATTCCCGGTGACACGGGGAATCATTCCCATTCTCTCTCTTACTCTTGGTGGCATAAACACACCCATAACTTGGTAAGCAAGATTGCTGAAGGGTTTTCCCGCTCGAGGTTGTGTAGGAGAGGTGACCAATCATAGTCTGTAATGCTTTTAATTGTTCCTTTGAGAAAACAATAGAAGATGATGGATTTTGTGAAGGAGTAGTAACAACACAACATAAGCATGCACCTGATTGTCAACATTCACTTTCTTAGTAGGTTTCCAATCTATTGGCTTGCCATGTATTTTCCAACAAGTGTCTCGTGTATAACCTAATTTCTTACAGTGATCACACCAAGGACGATTCCCCCTCTTAGATCTGATGTATTGAGAAGAGTTGTATGTGTTGAAAGTTAGGGTTAGATTTGTAATCTTGTAAATTATATTTATCTAATTCTGGTTTGTGGGTTGTTAGGTAAGTGACAGTCTATAGGAGAGTTGTTATGTTTGTTAGGTAAGTGAGAGTCTATAGGAGAGTTGTTATGTTTGTTAGGTAAGTGAGGGTCTATGGGAAAGTTGTTATTTTTGTTTTGATTTCCTTTTGGTGTGTATTTATACGTACGTGATTATGGAATAAAGCAAGAAATCAGAGTTTCTTCATGGTATCAGAGCAGAAGATTCACTCTCTCCTCTGATTAAATTCTCTCTCCTATTCGTCGGAATCTCCTCGCAAAGCACATCGAATCAGCGAGCCTCCGATGTTCTTCAAAATTTCCTCGCCGAGCACACCGACTCAGCTAGCCTCTGGATCTCCAAACCTGAATCGTCAACTCCGAGCATCGTTGGTACGCGTCAAACCCGCGAAGCTTCTTCGCCGCTGCGAATTAGTTCTGCGAAACCTCGTTAGTTCGCTATCGAGTTCTCCTCTGCTTCAGTCAAGGGCCTAATCAGATCATTGCCGCTGCAATTCAGATCATTTCCACTGCCTCTCCCCTCCGACTCTTCGCTGCTGCCTCTTCGCCTCTGTAAATTGAATCACCGCCGTTGCGAATCTTGTCAGAATCAGATCCTTCACGCTTCCCCTGCGTTCGCTCCAGCGAGGTTCGCTATCTGTTCTAAAGATCGTCAATCTTCGTTCGCTCCAGCGAGGTAATCCTTTTCCCATATCTGTTATAACGGTTAGCTTTGTTTGCTGTGCTGGTTAGCTCCGTTCGCTGTGCTGTGCCGTATTTCAAATAGTTTTCTATTATGGCTTCATCTAAGGATTATACACTAGGAAGTTTTGATTCGTCACCAATGTGTATTACTGGTCATAAATTGAATGGTCATAATTATGTTCAATGGTCACAAGTGGTACACATGTTCGTTTTGCATGTAAGGGTAAGGATGATTATCTATCCAAGGAAAAGGAGCAACCAAAAGAAGGTGATCCGGAATACAAACAGTGGAAAATAGACAATAACCTGGTGATGTCGTGGTTAATTAATTCCATGACTACTGAAATTGGGGAAAATTTCCTCCTCTACGACACAACCTATCGTATTTGGGAAGCAGCCAAAGAAACCTACTCTAGTAAGGAGTACACCTCTGAGTTGTTTCGAATCGAGTCTGTTCTCCATGATCTCTGTCAAGGAGACCAATCGGTCACCGAGTATTTTAACAACCTCTCACGTCATTGGCAACAATTAGATCTATTTGAACTACATACCTGGAAGTGTCCTGATGATAAGGCACAATATAACAAGATCACAGAACAGAAGAGAACATTTAAGTTTCTCTTTGGCCTGAACAGTAATCTGGATGAAGTTCGGGGACGAATCTTGGGAGTCAAGCCCTTGGTGTCTCTTCGTGAAGCTTTCTCGGAAATCCGAAGAGAGGAAAGCAGGAAAAGTATTATGATGGGCAAATCAGAATCAGTTCCAATCTCTGATGCTTCTGCACTCGTGTTTAGAAATTTCAGTTCAACAGGAAACCCTGGAGACAGTAGATCCCGGCAAGGGAGGCCTTGGTGTGACCATTGCAAAAAACCAGGCCATGTAAAGGAGACCTATTGGAAAATCCATGGGAAACCAGCTGATTGGAAACCTCGAAACCGGAATGATCATGACAGTAGGACATATGTGGCCAGTGTCGTACCTGATAAGAATGCCAATACAAAATCTTCTCCTTTTAGCAGGGAACAGATGGATGCACTCCAAAAACTCATAGGTGACACAATCCAGGGAAGTGGTCTAGTTGCTCAGAAAGTTGCACCAACCGCCCTAACTGCGAATAAGGGAGGAACTCAGCCCTGGATCATAGATACCGGAGCCTTCGATCATATGACAGGAGATAAGTCATTGTTTCAACAATATCAGGCCGATACATTCAATGCATCCATCAAGATTGCAGATGGGTCACACTCGAAAATATCAGGAACAGGTTCTATCCGTATCTATCCCAACTTATCTCTTACATCTGTTCTTCATGTGCCCGATTTGGATTGTCATCTTCTTTCAATAAGCAAATTGACTCGCGATTTAAACTGTGTGGCTAAATTCCATTCCAATTCATGCGTTTTTCAGGATTTGGAATCGGGGTGGATGATTGGCAGTGCTGAAGTCTGTTCGGGTCTCTACCACCTCAACTATGATCACGGTTGATTGACAAATGGAGACAAGTCATCCTTTCTATCTTTCCATTCCAACAATAAAATGTCTAGTAGCTTCAATAACGATAATGAGGTTCTATTGTTACATTATCGTCTAGGTCATCCCAACTTTGCGTATTTGTCTAAATTGTTCCCAAATCTTTTCTATAATAAAAATCCTCATTCTTTTTCATGTGAGATTTGTCAAATTGCGAAACATACTCGTACCTCCTATCCAAGTATAGGGTATAAATCTTCCAGCCCATTTTCGTTAATCCACAGTGATGTTTGGGGCCTCTCTAAAACAAAAAATATCTCTGGAGCACGATGGTTCGTGTCCTTCATTGATGATCACACACGTACTACGTGGATATTTCTTATGCGAGAAAAGTCTAAAGTTTGTTCCCTCTTCAAGCAGTTCCATACCATGATTAAAACGCAATACCAAACTCGCATTCGTGTTTTAAAAACGGATAACGCAAAGGAGTTCTTTAGTTCTAGTCTGGGAGACTACTTGTCCACCAAAGGCATCCTCCATATCAGCTCTTGTGTGGACACTCCCCAACAAAATGGGGTTGCTGAGCGGAAAAATCGCCACCTTCTTGACACCACTCGCTATCTCATGTTCTCTGCCCATGTTCCCAAATTCTATTGGGGCGACGCACTTCTCACGGCTACGTATCTTATCAATCGTATGCCTTCCCGCGTTCTTCAGTTTTCCAGTCCTCGTCAAGTATTTCTCAAGTCTTTTCCTCACCTTCGTCCTCCGTCTCTTGGCCTGGCTCCGAAAGTATTTGGATGTAGTGCCTTCGTCCATATACATTCCCATAATCGTGGCAAGCTTGATCCTCGGGCTCATAAATGCACATTCTTGGGGTACTCACCTACTCAAAAGGGGTACACGTGTTACTCTCCTGAGACAAAAAGAGTCTATGTCACCATGGATGTTACCTTCTGTGAACACCTTCCATACTACTCCAAGCCTGCTTGTCAGGGGGAGATGGTGAGTGACAGCCAGTTATGGTCCTCATGGTCATCTGTTCTTGAAACTATTCCAGATGATACCGTACCTAGTCCCCTCATTCTTGAACTTGAGTCTTCTCCGGCCTCACCTTTAATGTCTCCAATTGTCAATAACCAACTCCGTGTCTATGCAAGGAGAAGCAAACAACGAGTTGAGCAGGCAGATGCCCAAACAGATCAAGCTTTGCTTGATCCCGAACCGGTTCCGAATTTTGAACAACCCATCACTGAACCTAGCAATGCGGTAAACGATGAGGTTGATGATCTTGATCTACCAATCGCAATACGGAAAGGGGTTAGGAGTTGTACCATGCATCCTATTGGGAATCATGTATCATATGATAACTTGAGTGATTCTTATCGTGCATTTGTGTCTAGTCTCGACGCCACACAAGTGCCAACCAATATTGTGGAAGCATTAAAGCATCCTGGCTAGAAGAAAGCGGTACAAGATGAAATTGAGGCGCTTGAGAAAAATGGTACGTGGATAATGACAGAATTGCCCAGTGAGAAACGAACTGTGGGCTACAAATGGATATTCACAATTAAGCATAATGCTAATGGAAGTATTGAGAGGTTGAAAGCTAGGCTAGTTGCCAGAGGATTTACCCAATCATATGGAATTGATTACCAGGAGACTTTTGCACCAGTTGCTAAACTCAACACAATAAGAATTATCTTGTCTCTTGCTGCTAATCTCGGATGGGGACTTCAACAACTGGATATAAAGAATGCTTTTTTGAATGGGGATCTGGAAGAAGAAGTTTATATGGAAGTCCCTCCTCGGTATGAATATGATCTTAGTCCAACAAAGGTATGTCGACTCAAAAAATCTCTGTATGGACTGAAACAATCACCCTGTGCGTGGTTTGGGAGGTTTTCTAGCTTCATTCTAAGCCTTGGATATTCACGATGTCGAGCGAGATCACACACTTTGCTTGTTAAGAGGAGGTCCGAAACGTCTTTGACACTATTGATAGTGTATGTGGATGATATTATTTTGTCTGGAAATGATGAGCTAGAACTACAGGAATTGAAGGAAGCTCTGGCTCAAGAATTTGAAGTCAAAGATCTCGGGAACCTCAGGTATTTCCTACGTATGGAGGTTGCACGGTCCAAGGCAGGCATAGTTATGTCCCAGAGAAAGTACGTGTTAGATCTTCTTACAGAGACTAGCATGATGGAATGTAAACCGGCAACATCTCCCATGGATCCTCAGGGAAAGTTCGAACACAGTCATGAAAGCAGTCCCGTAGACAGGGGGAGATACCAGAGGCTGGTGGGACGTCTTATATATCTCTCCCATACTCGACCAGATATTGGATTTGCGGTTAGTGTTGTCAGTCAGTTTATGCATAGTCCCAATGACCAACATATGGAAGCTGTATATCGAATTCTCAGATACCTGAAGATGACTCCTGGAAAGGGGTTGCTATTCAAAAGGACTGATAAGAAGAATATTGAGGTATACTCAGATGCAGATTGGGCAGGGGATACTACCGATCGAAGATCGACCTCCGGATACTGTTCGTTTGTTTGGGGCAATCTTGTTACCTGGAGAAGTAAGAAGTAATCCGTGGTTGCTAGAAGTAGTGCAGAAGTAGAATATCGAGCCCTGTCTCAAGGAATCTGTGAAAGCATCTGGATAAGAAGGGTTCTGAGTGAGTTAGGTCAAGAGTACTCATCATCAATTCAAATGATGTGTGATAATCAGGCCGCCATAAGTATTGCCAAAAATCATGTTTATCATGACAGGACGAAGCACGTTGAGATTGACCGACACTTCATTTCCGAGAAAGTTAACAACCAAGTGGTGCAACTTACCTACGTTCCTACCAAGCAACAAGTGGCAGACATCCTCACTAAACCATTTCCAAGACCCAACTTCGAAGACTTGAATAGTAAGCTAGGTTTGTATAATATATACAATCCAGCTTGAGGGGGAGTGTTGAAAGTTAGGGTTAGATTTGTAATCTTGTAAATTATATTTATCTAATTCTGGTTTGTGGGTTGTTAGGTAAGTGAGAGTCTATAGGAGAGTTGTTATGTTTGTTAGGTAAGTGATGAGGGTCTATAGGAAAGTTGTTATTTTTGTTTTGATTTCCTTTTGGTGTGTATTTATACGTACGTGATTATGGAATAAAGCAAGAAATCAGAGTTTCTTCAGTATGATACCATGGTCAAAGCTTCTGGTCCAACAAATGAATCTGTTGTAGGCATCATTAATTCCTTTATGCTCTCCTCTTGTCAAACTTCATAAAAGGCTTCTCTAAGAGATGGTAGAGTTTTTGACCCATAATTCTTTCTCTTGCATCATCTAATTCCTTGTTGAGTCCTAGAAGAAATCTCAAAACTCTTTTTTTTTTCAACAATATCTTTGTAAAGTTTCATGTCTTCCCCACACTTTCAAGTATAAACTTCATACATATTTAACTGCTGCCATTTGCGAACATGAAGGTTGTGATATTGAGTTACATTGAGTTCTCCTTATCGCAAATTATACAACCTAGTTTCAGTTGCCATGAAAGCATATGAGTTCTCAGTATTGGAATAGGTTACACGAGCAGCATCCCATATTTCTTTTGCACTTTTGCATAGTAGAAAGTTTTCTTTGATGTAATTTAAGAGTCAAGAAATGACTAAATGATCATCAATTTTCCATCGTCTATATTTCGGGTCTTCCTCTTTAGGGACAAGGAGTATATCTAAGTAAATGACCATCTTTGCCCAGCCACAAATGTATATAAACACTGATTGATTCCCTTGTGACCTTGAAGTTTATGATTAATCCGAATTTTAGATGAGAAATCATGAAGTTGATGTTGAGATTGAGATTGAGAGGAGTTGTCAAAATTGACACTTTCGAGCTCATGTTTTGTCATTCTCCTTGAATAGAAAAGCGAGAGAAAAAAACGAAAAGTGACATGTGAACAAGATAAAAAAGTCGATGAGCTTGGGATGGCACGAAAAGACTTGCGCGAATACTTCTCTCGTTACAGAGAACGTGAATGGTCGTCGGAGGAGAAGATCTCGCCGAAAAAGTTGTCGGAGGTTGACTTTGATACCACGTAGATATTTGAGGCAAAATGTATGTTTTTTCTCATTATTCTAACCTACCAATACATGAGTACATATATATATTACAAGATTTAAGAACAAAAAAGGAAATTATAACCTAGAATAAAATCTATTCTAACAAAGGAAAAAATACAATTGAGTTAAGATAAAATCAAAGATCTTGAATTACATAATTCTACGAATATATATATATTTGGAATAGCAATGAAATGAAGGGGTATTTTTAGGAGTAGACCAAATTGGAAAAACATTTACAATACTAGGCAAAAAAAAAAAAATTTAACAATCATAGTTGTATTGTACATAAATTATACGGTATAATTAATACATAGTATTGTATTAATGTACGATACTGCACTAATAATATGTAATATTGTATTAATAATACATAATAATGTATTAATAATACAAAATACTATATTAATACCCTAAATTATACCGTATTTTTTACTATGGATGCAAAAAAATTCAAATTTGCCAAGATATGCAATTATTTTGTGAAATTGGATTATCCAGCACAATTTCTCTTAAATAAGTTCTCTATCCTTGATGGAGACTTTGCATGGTTGTTGGATTTCTCCATGAGATAATTATAGATTATTTTCGTGGGTATTAAGTTAGCATATTGATAAATAAATAAAACTTTAACAAGGTGTTGCAAGACGATGTTGGGTGCAAAATGGTTTGGAAAGGTGAGGGCCTGATTGAAGGTGCTCGCCTTGGCTTTTTTAAAGGTGCCATACCGCATATGTGCAAGTCGATGGCCATAGGCTAAGAAGGACGATGGCCTTGAAAACACTAATTTGAAAAGACGGAGTTAGCTTTAATTTTATTTATTTTTAACCTTGGAATACTGTTTCTTATCAATTTAAGAGTTCTGAAGCTTTATCTCTTATGGATATCAAGCCTTTGGTATTTTGAAGTAAAACTAAAACTGATTTTCTTTCCATTTTTTTAATTTTTTGTTATATGGTTTATTATATTATGCCATATTTCTTTATCTTATTTGATGGCTTCTGAAGAGTGAAAAAGATCGGTACACGTCTTATTAGTTTTTATTTATTTATTTTTCTTACCTCTCAAATCTGTGTTTTAATTATCAATAGGTTTTATTGAACTATAAAATAAATATGGGCGTGTTTGGCCAGGTTGGTTGGGTGGGAAGGGATCACTTCTTCTGAACCGATGCTTCCACCATTAATTTTTTGCCTTCAGCCATGGTGGTCGTTTGTTGGATTTATACCATTCAATCCTACAACATTTGGATATCAAGAAAATTTGTAGTAAATTAATTTCTAAGTAGATGGCTATGATGGATTGAATCTATCACCTCTATTATATAATATTCTTCGTTGGATCTTTATTCCGCTTGTAAATCCACCAAACCTGCAAAATCACAGCCGGGTGAATCTTGCACGGATCTCTTCGTACATTCACAATTCTACTACTACCTTCTTCTCATCCTTTCATTGAGACCTCCAAACTCTGTTGCCTCGCTATAATTTCTTCATTACACTCTTCTACATCAGTTAATCTCGCGTCCATCTTCCTAACCATTCACCTAGATAACAAGCTTTGTACCAAAAATTGATAGAATTTATTAATGTATCAAACTAGGAAGTTGCAGAGCTTCCCACGAAGAATGTAAAAAGATTGAATGCCTACAGATAATAATCTAACAAACTCTCACAGGCTCCTCTCATGCCATTTCTTAAAACAACTTACATAACCGATTTCATCCTTTAGCTTTGTCTGTTGGTGGCTTATTGCTATATTGCTTTGGTATATTCTCTTGATATAAGGATACATTCTTCATTCTTAGGGATTTTCAAGCGCAAGTTGTGATGGTTTTCACTTGTTTTCTTTGCTAATTTTATGCAGACTTTCCATCCCCCGCTCCCGCCCGGGCAACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTTGAAATTGAATGCATCGCTGCGCTTTGAAATTTTTACCTAATTTCAAGTACCTTGTTCTCAAGACTTCATAAATTATTAATAAGATGGAGATAGCAATCACGGGAACCCCCCCATCCAAATTAGCTTATGGATTCCCTGAGGCTTTTCTTGTAAGTTGTAACACTTGACTGTCGTATGTGCCTTATACCACTGAAAAAAACAGTTTAGATTGAAACATATTGATATTGTTGCATTGAATGTTGCCATCTAGGGGTGGAAGGCGAAACCAAAAAATTGAAAAAACCGCTTGAAACTGACATTGAACCGATTTAATTGAGCAGGTTCAGTTTGAAATTAAAAAAAATTTAATGTTA

mRNA sequence

TCCGTGATGGTTGTCAGCAACCAATATCTCAAAGAGAAAAAATTCTGTGCTTCTCAGTGCTATTTGCGAAGAGTGAGAAGGAAAGCAAGACCTAGACGATCATGGCTTGGTGCGCGGCTCGAACCTTTCACATGCCGGCGTTGGACATCACTGCATTGCGCTCCAAGACGCCCTTGGCCCTCGGCGTCGGTTGCGCTTCGGTGGCCGGAACTACCTTGTGGCGATCTCCCAAACGCCAAATTCCCTTCGCATCCCTCGGCATTTCTACCAATGCTAGTATCAGGGAAGCTGTAAATACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCGCAGGGTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCTGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACTGAGCAGGTCCTAAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTCAAGACAACTATTATGTTGGCTGATCTGAAGGATTTCAAGAAAGTAAATGAGATTTATGGTAAATACTTTCCATCCCCCGCTCCCGCCCGGGCAACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTTGAAATTGAATGCATCGCTGCGCTTTGAAATTTTTACCTAATTTCAAGTACCTTGTTCTCAAGACTTCATAAATTATTAATAAGATGGAGATAGCAATCACGGGAACCCCCCCATCCAAATTAGCTTATGGATTCCCTGAGGCTTTTCTTGTAAGTTGTAACACTTGACTGTCGTATGTGCCTTATACCACTGAAAAAAACAGTTTAGATTGAAACATATTGATATTGTTGCATTGAATGTTGCCATCTAGGGGTGGAAGGCGAAACCAAAAAATTGAAAAAACCGCTTGAAACTGACATTGAACCGATTTAATTGAGCAGGTTCAGTTTGAAATTAAAAAAAATTTAATGTTA

Coding sequence (CDS)

ATGGCTTGGTGCGCGGCTCGAACCTTTCACATGCCGGCGTTGGACATCACTGCATTGCGCTCCAAGACGCCCTTGGCCCTCGGCGTCGGTTGCGCTTCGGTGGCCGGAACTACCTTGTGGCGATCTCCCAAACGCCAAATTCCCTTCGCATCCCTCGGCATTTCTACCAATGCTAGTATCAGGGAAGCTGTAAATACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCGCAGGGTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCTGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACTGAGCAGGTCCTAAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTCAAGACAACTATTATGTTGGCTGATCTGAAGGATTTCAAGAAAGTAAATGAGATTTATGGTAAATACTTTCCATCCCCCGCTCCCGCCCGGGCAACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTTGAAATTGAATGCATCGCTGCGCTTTGA

Protein sequence

MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRSPKRQIPFASLGISTNASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAKVEIECIAAL

Homology

[Close]

BLAST of Sed0004226 vs. NCBI nr
Match: XP_038903207.1 (reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 321.2 bits (822), Expect = 5.4e-84
Identity = 162/178 (91.01%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCAARTFHMPA D+TALRSKTPLA+GVGCASVAGTTLWRS    KRQ+PFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRSSSTSKRQMPFASLGISTD 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
            SI+EAV TDKAPAALGPYSQ IKANNLLFVSG LGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGCLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSP+PAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPSPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. NCBI nr
Match: XP_008463412.1 (PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 161/178 (90.45%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCA R+FHMPA D+TALRSKTPLA+GVGC SVAGTTLWRS    KRQIPFASLGIST+
Sbjct: 1   MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. NCBI nr
Match: XP_004152932.1 (reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus] >KGN56123.1 hypothetical protein Csa_009669 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 159/178 (89.33%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCAARTFHMPA D+TALRSK+PLA+GVGC SVAGTTLWRS    KRQIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFPSPAPAR+TY+VA LPLDAK
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAK 178

[Close]

BLAST of Sed0004226 vs. NCBI nr
Match: XP_022976324.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCAAR  HMPALDITALRSKTPLA+GVGCASVAGTT  RS    KRQIPFASLGIST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTFCRSSSTSKRQIPFASLGISTD 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
            SI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  TSIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. NCBI nr
Match: XP_022942433.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata] >XP_023545861.1 reactive Intermediate Deaminase A, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6600781.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCAAR  HMPALDITALRSKTPLA+GVGCASVAGTTL RS    KRQIPFASL IST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTLCRSSSTSKRQIPFASLSISTD 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           ASI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  ASIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.3e-63
Identity = 127/178 (71.35%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDI-TALRS-KTPL-ALGVGCASVAGTTLWRSPKRQIPFASLGISTN 60
           M W   R+ + P LD+ TALRS +TPL A GVGCA+ AG +L+R   R  PFASL +S +
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSAS 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +  +E V+T+KAPAALGPYSQ IKANNL+F+SGVLGL PETGKFVS+ VEDQTEQVLKNM
Sbjct: 61  SVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFP+P+PAR+TYQVAALPL+AK
Sbjct: 121 GEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAK 178

[Close]

BLAST of Sed0004226 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 60  IREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 119
           IR  ++T KAP A+GPYSQ +  +  +++SG +G++P +G+ VS  V ++ +Q LKNMGE
Sbjct: 5   IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGE 64

Query: 120 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALP 172
           ILKA G  +++VVKTT++LAD+ DF  VNEIY +YF S  PARA YQVAALP
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALP 116

[Close]

BLAST of Sed0004226 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 62/111 (55.86%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 61  REAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEI 120
           R+ +++  AP A+GPYSQ ++A N +++SG LGL+P+TG  + + V +QT Q LKN+GE+
Sbjct: 41  RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGD-LKEGVVEQTHQSLKNLGEV 100

Query: 121 LKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALP 172
           LKA GA Y +VVKTT++L ++ DF  VNE+YG+YF SP PARA YQVAALP
Sbjct: 101 LKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALP 150

[Close]

BLAST of Sed0004226 vs. ExPASy Swiss-Prot
Match: P52760 (2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE=1 SV=3)

HSP 1 Score: 132.1 bits (331), Expect = 6.1e-30
Identity = 60/112 (53.57%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 60  IREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 119
           IR+ ++T KAPAA+GPYSQ ++ +  +++SG +GL+P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 64

Query: 120 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALP 172
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PARA YQVAALP
Sbjct: 65  ILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALP 116

[Close]

BLAST of Sed0004226 vs. ExPASy Swiss-Prot
Match: P52759 (2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Rida PE=1 SV=3)

HSP 1 Score: 128.3 bits (321), Expect = 8.8e-29
Identity = 59/112 (52.68%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 60  IREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 119
           IR+ ++T KAPAA+G YSQ +  +  ++VSG +G++P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGE 64

Query: 120 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALP 172
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PARA YQVAALP
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALP 116

[Close]

BLAST of Sed0004226 vs. ExPASy TrEMBL
Match: A0A1S3CJ54 (reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103501583 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.9e-84
Identity = 161/178 (90.45%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCA R+FHMPA D+TALRSKTPLA+GVGC SVAGTTLWRS    KRQIPFASLGIST+
Sbjct: 1   MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. ExPASy TrEMBL
Match: A0A0A0L2Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.4e-83
Identity = 159/178 (89.33%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCAARTFHMPA D+TALRSK+PLA+GVGC SVAGTTLWRS    KRQIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFPSPAPAR+TY+VA LPLDAK
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAK 178

[Close]

BLAST of Sed0004226 vs. ExPASy TrEMBL
Match: A0A6J1IN69 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476753 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.4e-82
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCAAR  HMPALDITALRSKTPLA+GVGCASVAGTT  RS    KRQIPFASLGIST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTFCRSSSTSKRQIPFASLGISTD 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
            SI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  TSIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. ExPASy TrEMBL
Match: A0A6J1FUT7 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447476 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.3e-82
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRS---PKRQIPFASLGISTN 60
           MAWCAAR  HMPALDITALRSKTPLA+GVGCASVAGTTL RS    KRQIPFASL IST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTLCRSSSTSKRQIPFASLSISTD 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           ASI+EAV TDKAPAALGPYSQ IKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  ASIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. ExPASy TrEMBL
Match: A0A6P4APP4 (reactive Intermediate Deaminase A, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107431842 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.4e-74
Identity = 145/178 (81.46%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDITALRSKTPLALGVGCASVAGTTLWRSP---KRQIPFASLGISTN 60
           MAWCAARTF++PA+D+ ALR++ PLA+GVG ASVAG+ +WRS    KR  PFA LGIST+
Sbjct: 1   MAWCAARTFNVPAIDVGALRTRAPLAVGVGFASVAGSNIWRSSSSMKRSAPFACLGISTD 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
             I+EAV TDKAPAALGPYSQ IKANN L+VSGVLGL PETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  TRIKEAVKTDKAPAALGPYSQAIKANNFLYVSGVLGLIPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIY KYFPSPAPAR+TYQVAALPLDAK
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAK 178

[Close]

BLAST of Sed0004226 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 241.1 bits (614), Expect = 6.6e-64
Identity = 127/178 (71.35%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   MAWCAARTFHMPALDI-TALRS-KTPL-ALGVGCASVAGTTLWRSPKRQIPFASLGISTN 60
           M W   R+ + P LD+ TALRS +TPL A GVGCA+ AG +L+R   R  PFASL +S +
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSAS 60

Query: 61  ASIREAVNTDKAPAALGPYSQGIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +  +E V+T+KAPAALGPYSQ IKANNL+F+SGVLGL PETGKFVS+ VEDQTEQVLKNM
Sbjct: 61  SVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARATYQVAALPLDAK 176
           GEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFP+P+PAR+TYQVAALPL+AK
Sbjct: 121 GEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAK 178

The following BLAST results are available for this feature:

BLAST of Sed0004226 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903207.1	5.4e-84	91.01	reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida]	[more]
XP_008463412.1	2.0e-83	90.45	PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo]	[more]
XP_004152932.1	1.7e-82	89.33	reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus] >KGN56123.1 h...	[more]
XP_022976324.1	1.1e-81	90.45	reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima]	[more]
XP_022942433.1	1.9e-81	90.45	reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata] >XP_023545...	[more]

BLAST of Sed0004226 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JQ4	9.3e-63	71.35	Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P52758	1.6e-30	54.46	2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=...	[more]
Q10121	1.6e-30	55.86	RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ...	[more]
P52760	6.1e-30	53.57	2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE...	[more]
P52759	8.8e-29	52.68	2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Ri...	[more]

BLAST of Sed0004226 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJ54	9.9e-84	90.45	reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0L2Z6	8.4e-83	89.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1	[more]
A0A6J1IN69	5.4e-82	90.45	reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FUT7	9.3e-82	90.45	reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 G...	[more]
A0A6P4APP4	5.4e-74	81.46	reactive Intermediate Deaminase A, chloroplastic OS=Ziziphus jujuba OX=326968 GN...	[more]

BLAST of Sed0004226 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20390.1	6.6e-64	71.35	endoribonuclease L-PSP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 67..183 e-value: 2.7E-42 score: 143.6
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 27..184
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 58..184 e-value: 2.8E-49 score: 168.5
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 61..184
IPR006056	RidA family	TIGRFAM	TIGR00004	TIGR00004	coord: 62..183 e-value: 7.3E-51 score: 169.6
None	No IPR available	PANTHER	PTHR11803:SF51	BNAA05G36080D PROTEIN	coord: 27..184
None	No IPR available	CDD	cd00448	YjgF_YER057c_UK114_family	coord: 76..182 e-value: 2.94603E-44 score: 140.386
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 160..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004226.3	Sed0004226.3	mRNA
Sed0004226.1	Sed0004226.1	mRNA
Sed0004226.2	Sed0004226.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901565	organonitrogen compound catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0019239	deaminase activity