Sed0004142 (gene) Chayote v1

Overview


Name	Sed0004142
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein PHR1-LIKE 2-like
Location	LG10: 3426951 .. 3430970 (-)
RNA-Seq Expression	Sed0004142
Synteny	Sed0004142

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGTTTAAATTATAATAATTTGAGAAATAATTTGATTCATCGAAGACGATGATTGACACAAAGAAGACAAAGCTTCGAAATCCGTTCTGTTTCTCCATTTTCGCCATCTTCTTCACTGTAAATGGAGCTTCAATTTCTCGATTCAATTTCCCAACCATTTTCATCTTCTCCTTCGAGTCGTCACTGATTTTCACTTTCACCATTTCCTTTGCCGAATCTCAAGGTTATGTATCCAAGACTCGTTAATCCCGACGGCGATATCCAGATCCATGGCGCCGTTGCTTCCGATCCTTGCCTCGTTTTGACCTCAGATCCCAAGCCTCGCCTCCGGTGGACGGCCGATCTTCACGAGCGCTTCATCGACGCCGTTACTCAGCTCGGCGGTGCCGGAAGTCAGTACTCTTTCTTCCTTTGTTTGATTTCGTGATGTTTTTGCTTAGCGTTTTTATTTTGTTGATCTGGATGTTTTTTCTGTTGATGAGCTGCTCGTTTTGCTTGATTGACTGAGATTTCTCTGTTTTACTTGGAATTAGCGGCGATTTGTTTTGATTTTAACCAGGACTGATTGTTGCGTTGAAATGAATTGCTTTCCGTGATGGTCGGGCGATATGTCTCGTGAGATTAGTTTAGTTGCGCTTAAGGTGGCCTGAACACTCGCGGATTAAACCAAAAAAAGAAAAGTCAAGCACTGGAATTCTGGCGTTTTGATACCGGTTTTCAATTGTGCTGACAATGTAGATGGTGAGTTTGATGTTTTCCGGTGCCACGGTCTAGGAACGGGCAAGTGATGCTCGGAGTAAAGCTCGAAGTTCTTGGGTCATAAAAAAATGTAGATGGTGAGTTTGATGTTAATTAGGAGCTTCAATACTTTGGGGATGCTGTTGAAAGATTCCCCATCCATGTAGATCATCTGAGTATTCAACCTGGATAAATTAGATAGCTTATGTTACAAAAGAACCCAAAAGAAAAGAAACACGTGGGTCTAGACTTTAGATGAATGGGATGGGAGGCCAGGCTCAATTCTTCCGGTTAGTTTTTACTATTTGGTTTCAGGAATTTTGAGTCCAAGGTTATATGGGGCTTTTGTGCTTGAGTTCTTTGAAGAATATTCATGAATGATTATTGTGAGGGAAGTTTGCGCTTCTTGGCTCGGAAATTGAGTTCATTTAGCAAGTGGATATTCGATCTTGATGTTACTACATTTAAGAGCAGTCGGTCAGGAAGACTTAGTCATTGATTTTCTGGTTGGCAATGGAATCTTTGCTAGTTTTAGTTTTTCATAGTTGTAAAGCCTTCTTTACAAGTTAGCTCATAGTTGTAGTTTTTTCAAAAACAACTTAGCGGCCAAGGAGACAAGGTGTCCTCTTTCACTAGGAGAAGGGATTGGACAAAATACCTACGACCATTATTGATAATAAGAGCAGAGTAATTACAAAAGTAATTGTGTAGAACACTCTAACATTTTGAATTGTGCAATCAAACAAAGTCAATCGAAATCCTAAGGTTTTTTTTGAAGATCCTGTTATTTCTTTTGTTCAAAAGAGTACTTGATTTGTGCCAACATTAGCATAGGTTAGCAGTTAAGGTCTACTCCTTCCAATTTCCTCCACATTTGTTGTACTAGAAAGATAGTTCACTTGTTTTCAACAGAGAATCTGCTTTGCATGCTTTGATTGATAGGTCTTCTTACTAACTTTTCTTTCTTTTGATTTTTTGGTGGGGACAAAGGTGGGGAGGATATGGGGTCCTATTTGAATTTTAACCAATGATAAGGGTTTGACATTTGAACACTTGGTGCAGAAGCTACACCTAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTTCATTTGAAGAGCCACCTCCAGGTGATCATAATGACTTAAAAAGGCATCTTTTTATGAAGGAACTTTGATGCTGGAGTTCATGGTTTATTTGTATTTAGGATGTTTGTTTCTTCATTACAGAAGTACAGATTAGGTAAGCAATCAGGGAAGGAAATGGGTGAGGCATCTAAAGATGGTAAGGAATACATCTCTATTTTTGTCCTTGCTTATCATGTAATGTAGCCTCCATGAGTTTGCTGATATTTAACTTCACTACTAATGTTGGGTCATGGAGTTCTTATCCAAAAGAGCTTGCTCTCCTCTCACCACCAGTATTTGCTCTAGCTACAAATTTCTGAAAATTTTAAGCTGTCTGGTCCAAATATTTAAATCATTGATTATCGCTTGGTGCAATGAACATCAGGTGCATATCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGAGTAAGATAAGAGTTTTTATCCCTCCTTTAAGATACTTATGATAATGCCTCGAATGCTGTGTTATAAGATTTGAAGTATATTCATACTGTTTCTAACTACTTTGATGTCTCTTTTAGTGGTTGTGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGTAAAATTCTCATTCTTGTCATTAGAATGAAATTGATGATGGTTTTGGACAGATTCTTCCATATGGATCAAACCTTGTGTATGAATACTCGTGGGTTCCGAACTTGATTTGAATGGAGATGGCATATAAGTTTCTTGTTTTTGATTGCTTGCTTAGTTTTATTCTTGTGGTCGAGTAGATCTAGGGAAGACTAGGAAGAAAGATGATTCTCTGTGTTTGGACCACTAAGAATCATTCTCCTCGTAATCTATATCTTCATAACAACTCTTTTATTCTGTTCATAGCCACTTTTTATTCTCTCCATAGCTATTTTTTACTTACATCATATTCATTATTTTATTTTCTCCATAATTATTCTCTTCACCCTAAATACAAGTAATAGTTTTTCCTATAATCATTTTCTTCCGCTCAAACACAGATAATAATTCTCCTCTATATTCTTCCTTTAATTCTCATCCTCCCCATAATCATTCTCATTCTCTTTGCCTCAATCATCCCCGTACTGACTCAAAATGTATGATACACTACTATAACAAGCGATGTATGATTTTGTACCTCCTCGATTGGATAGGAACTTCCAAGTGCTAATACTGAGACTTTGGACAGGCAGAGAAGCACCTACGAATCCGTGAGGATGCTGAGCGAAGATATTTAGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTTATTGGCGGCGCAGTCTCAGAATCAGACAGCAAGAAGTCTCAAGGACTGGATCATAGGGGCCCAAGAAGTTCCTCGGTCGATCCACTCGGTTTCTACGCTTCACAATCACAGGAGATGGAAAGAGTGAATGGCACAGAAGCTCAAGCTAATCTTCCTTGCCACAGAGCTGATTGTTCAACAGAAAGCTGCCTAACTTCAAACGAAAGTCCTGGTGCGGGATTGAACATGGAAAAATCTCCTGTTGCAAGCAAGAAAAACGTTGTTAACTTGGATTCAGCAACTGCATCTTTGATTTGGAGTGAAGCCAAGGAAAGATTACAAGATGCAAATATCATCCAAGTTAACCATCACGGCGCATTGGGGTGCGACATGTGGGGATGAAACTTTGCTTGCAGACAAAAACTCATCATGATTCATGTCAAGTATGTTCTATTTACAGCTTTGTATAAATTTCATCATTTTCCATTCATAGAATCTGGTATGAACTGCAGCAAGAAGCCAAGAACATTCCTTAGCTTGTAAAACCGAGCTTGTTCGTAGACAACTATTCGAAATGCACGTAGTTGGGCATTCTTTTCTCTATTCTAAACAATCTCAGTTGGTTCCTGTCTGACTTTTTGCAGATTTTAGTTTACTATCAGGGTGTATTACAGTAATGTTAAGTTGGAAACACAGCCCTTTCAGTAATTAGTAAATAAATGGACCTTGTCTTCCATTGATGGTGGCAAAATGAATGAATCTTTGTGTCATTTTTGCTTAACAAGTGTAATACTTTTTCTCATAGTAAATCATAATTACTTAGCATAA

mRNA sequence

GAAAGTTTAAATTATAATAATTTGAGAAATAATTTGATTCATCGAAGACGATGATTGACACAAAGAAGACAAAGCTTCGAAATCCGTTCTGTTTCTCCATTTTCGCCATCTTCTTCACTGTAAATGGAGCTTCAATTTCTCGATTCAATTTCCCAACCATTTTCATCTTCTCCTTCGAGTCGTCACTGATTTTCACTTTCACCATTTCCTTTGCCGAATCTCAAGGTTATGTATCCAAGACTCGTTAATCCCGACGGCGATATCCAGATCCATGGCGCCGTTGCTTCCGATCCTTGCCTCGTTTTGACCTCAGATCCCAAGCCTCGCCTCCGGTGGACGGCCGATCTTCACGAGCGCTTCATCGACGCCGTTACTCAGCTCGGCGGTGCCGGAAAAGCTACACCTAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTTCATTTGAAGAGCCACCTCCAGAAGTACAGATTAGGTAAGCAATCAGGGAAGGAAATGGGTGAGGCATCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTGTGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCACCTACGAATCCGTGAGGATGCTGAGCGAAGATATTTAGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTTATTGGCGGCGCAGTCTCAGAATCAGACAGCAAGAAGTCTCAAGGACTGGATCATAGGGGCCCAAGAAGTTCCTCGGTCGATCCACTCGGTTTCTACGCTTCACAATCACAGGAGATGGAAAGAGTGAATGGCACAGAAGCTCAAGCTAATCTTCCTTGCCACAGAGCTGATTGTTCAACAGAAAGCTGCCTAACTTCAAACGAAAGTCCTGGTGCGGGATTGAACATGGAAAAATCTCCTGTTGCAAGCAAGAAAAACGTTGTTAACTTGGATTCAGCAACTGCATCTTTGATTTGGAGTGAAGCCAAGGAAAGATTACAAGATGCAAATATCATCCAAGTTAACCATCACGGCGCATTGGGGTGCGACATGTGGGGATGAAACTTTGCTTGCAGACAAAAACTCATCATGATTCATGTCAAGTATGTTCTATTTACAGCTTTGTATAAATTTCATCATTTTCCATTCATAGAATCTGGTATGAACTGCAGCAAGAAGCCAAGAACATTCCTTAGCTTGTAAAACCGAGCTTGTTCGTAGACAACTATTCGAAATGCACGTAGTTGGGCATTCTTTTCTCTATTCTAAACAATCTCAGTTGGTTCCTGTCTGACTTTTTGCAGATTTTAGTTTACTATCAGGGTGTATTACAGTAATGTTAAGTTGGAAACACAGCCCTTTCAGTAATTAGTAAATAAATGGACCTTGTCTTCCATTGATGGTGGCAAAATGAATGAATCTTTGTGTCATTTTTGCTTAACAAGTGTAATACTTTTTCTCATAGTAAATCATAATTACTTAGCATAA

Coding sequence (CDS)

ATGTATCCAAGACTCGTTAATCCCGACGGCGATATCCAGATCCATGGCGCCGTTGCTTCCGATCCTTGCCTCGTTTTGACCTCAGATCCCAAGCCTCGCCTCCGGTGGACGGCCGATCTTCACGAGCGCTTCATCGACGCCGTTACTCAGCTCGGCGGTGCCGGAAAAGCTACACCTAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTTCATTTGAAGAGCCACCTCCAGAAGTACAGATTAGGTAAGCAATCAGGGAAGGAAATGGGTGAGGCATCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTGTGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCACCTACGAATCCGTGAGGATGCTGAGCGAAGATATTTAGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTTATTGGCGGCGCAGTCTCAGAATCAGACAGCAAGAAGTCTCAAGGACTGGATCATAGGGGCCCAAGAAGTTCCTCGGTCGATCCACTCGGTTTCTACGCTTCACAATCACAGGAGATGGAAAGAGTGAATGGCACAGAAGCTCAAGCTAATCTTCCTTGCCACAGAGCTGATTGTTCAACAGAAAGCTGCCTAACTTCAAACGAAAGTCCTGGTGCGGGATTGAACATGGAAAAATCTCCTGTTGCAAGCAAGAAAAACGTTGTTAACTTGGATTCAGCAACTGCATCTTTGATTTGGAGTGAAGCCAAGGAAAGATTACAAGATGCAAATATCATCCAAGTTAACCATCACGGCGCATTGGGGTGCGACATGTGGGGATGA

Protein sequence

MYPRLVNPDGDIQIHGAVASDPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPSTNNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERACKMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGTEAQANLPCHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANIIQVNHHGALGCDMWG

Homology

[Close]

BLAST of Sed0004142 vs. NCBI nr
Match: XP_038883093.1 (protein PHR1-LIKE 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 541.6 bits (1394), Expect = 4.4e-150
Identity = 279/314 (88.85%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIH---GAVAS--------DPCLVLTSDPKPRLRWTADLHERFIDAVT 60
           M+PRLVNPDGDIQIH   G+VAS        DPCLVLTSDPKPRLRWTADLHERF+DAVT
Sbjct: 1   MFPRLVNPDGDIQIHGHRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGK+MGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERAC 180
           NNFSPDLPISEMADG EVKEALRAQMEVQSKLHLQVEAEKHLRIR+DAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT-EAQANLP 240
           KMLADQFIGGAVS+SDSKKSQG D + PRSSS+D LGFY SQSQEMERVNGT E QANLP
Sbjct: 181 KMLADQFIGGAVSDSDSKKSQGQDRKSPRSSSIDALGFYPSQSQEMERVNGTEEVQANLP 240

Query: 241 CHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANII 300
           C RADCSTESCLTSNESPG GL MEKSPVASKKN+VNLDSATASLIW EAKER+QDANII
Sbjct: 241 CQRADCSTESCLTSNESPG-GLAMEKSPVASKKNMVNLDSATASLIWGEAKERIQDANII 300

Query: 301 QVNHHGALGCDMWG 303
           QVNHHG  GCDMWG
Sbjct: 301 QVNHHGVSGCDMWG 313

[Close]

BLAST of Sed0004142 vs. NCBI nr
Match: XP_016899337.1 (PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor APL-like [Cucumis melo])

HSP 1 Score: 532.3 bits (1370), Expect = 2.7e-147
Identity = 273/314 (86.94%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIH---GAVAS--------DPCLVLTSDPKPRLRWTADLHERFIDAVT 60
           M+PRLVNPDGDIQIH   G+VAS        DPCLVLTSDPKPRLRWTADLHERF+DAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGK+MGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERAC 180
           NNFSPDLPISEMADG EVKEALRAQMEVQSKLHLQVEAEKHL+IR+DAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT-EAQANLP 240
           KMLADQFI GAVS+SDSKKS+G D + PRS+S+DPLGFY +QSQEMERVNGT E QANLP
Sbjct: 181 KMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLP 240

Query: 241 CHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANII 300
           C RADCSTESCLTSNESPG GL MEKSPVASKKN+VNLDSATASLIWS+AKE +Q+ANII
Sbjct: 241 CQRADCSTESCLTSNESPG-GLAMEKSPVASKKNMVNLDSATASLIWSDAKEGIQNANII 300

Query: 301 QVNHHGALGCDMWG 303
           QVNHHG  GCDMWG
Sbjct: 301 QVNHHGVSGCDMWG 313

[Close]

BLAST of Sed0004142 vs. NCBI nr
Match: XP_022132807.1 (protein PHR1-LIKE 2-like isoform X2 [Momordica charantia])

HSP 1 Score: 528.1 bits (1359), Expect = 5.0e-146
Identity = 269/312 (86.22%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIHGAVAS---------DPCLVLTSDPKPRLRWTADLHERFIDAVTQL 60
           M+PRLVNPD DIQIHG   S         DPCLVLTSDPKPRLRWTADLHERF+DAVTQL
Sbjct: 1   MFPRLVNPDSDIQIHGGRGSATSDLTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQL 60

Query: 61  GGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPSTNN 120
           GGA KATPKAIMRTMNVKGLTLFHLKSHLQK+RLGKQSGK+MGE SKDGAYLLESPSTNN
Sbjct: 61  GGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEGSKDGAYLLESPSTNN 120

Query: 121 FSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERACKM 180
           FSPDLPISEMA+G EVKEALRAQMEVQSKLHLQVEAEKHLRIR+DAERRYLAMLERACKM
Sbjct: 121 FSPDLPISEMAEGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKM 180

Query: 181 LADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT-EAQANLPCH 240
           LADQFIGGAVS+SDSKKSQGLD + PRSSSVDPLGFYASQSQEMER+NGT E QANLP  
Sbjct: 181 LADQFIGGAVSDSDSKKSQGLDRKSPRSSSVDPLGFYASQSQEMERMNGTEEVQANLPYQ 240

Query: 241 RADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANIIQV 300
           RADCSTESCLTSNESPG GL MEKSPV S+K +VNLDS TASLIWSEAK+R+QDANIIQ+
Sbjct: 241 RADCSTESCLTSNESPG-GLTMEKSPVGSQKKMVNLDSVTASLIWSEAKDRIQDANIIQI 300

Query: 301 NHHGALGCDMWG 303
           NHH A GCDMWG
Sbjct: 301 NHHSASGCDMWG 311

[Close]

BLAST of Sed0004142 vs. NCBI nr
Match: XP_011658095.1 (protein PHR1-LIKE 3 isoform X3 [Cucumis sativus])

HSP 1 Score: 526.6 bits (1355), Expect = 1.5e-145
Identity = 271/314 (86.31%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIH---GAVAS--------DPCLVLTSDPKPRLRWTADLHERFIDAVT 60
           M+PRLVNPDGDIQIH   G+VAS        DPCLVLTSDPKPRLRWTADLHERF+DAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGK+MGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERAC 180
           NNFSPDLPISEMADG EVKEALRAQMEVQSKLHLQVEAEKHL+IR+DAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT-EAQANLP 240
           KMLADQFI GAVS+SDSKKS+G D + PRS+S+DPLGFY +QSQEMERVNGT E QANLP
Sbjct: 181 KMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLP 240

Query: 241 CHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANII 300
           C RADCSTESCLTSNESPG GL MEKSP ASKKN+VNL SATASLIWS AKE +Q+ANII
Sbjct: 241 CQRADCSTESCLTSNESPG-GLAMEKSPAASKKNMVNLGSATASLIWSGAKEGIQNANII 300

Query: 301 QVNHHGALGCDMWG 303
           QVNHHG  GCDMWG
Sbjct: 301 QVNHHGVSGCDMWG 313

[Close]

BLAST of Sed0004142 vs. NCBI nr
Match: KAA0025596.1 (protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa] >TYK12471.1 protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 524.6 bits (1350), Expect = 5.5e-145
Identity = 273/323 (84.52%), Postives = 289/323 (89.47%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIH---GAVAS--------DPCLVLTSDPKPRLRWTADLHERFIDAVT 60
           M+PRLVNPDGDIQIH   G+VAS        DPCLVLTSDPKPRLRWTADLHERF+DAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGK+MGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVE---------AEKHLRIREDAERR 180
           NNFSPDLPISEMADG EVKEALRAQMEVQSKLHLQVE         AEKHL+IR+DAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNG 240
           YLAMLERACKMLADQFI GAVS+SDSKKS+G D + PRS+S+DPLGFY +QSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 T-EAQANLPCHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAK 300
           T E QANLPC RADCSTESCLTSNESPG GL MEKSPVASKKN+VNLDSATASLIWS+AK
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPG-GLAMEKSPVASKKNMVNLDSATASLIWSDAK 300

Query: 301 ERLQDANIIQVNHHGALGCDMWG 303
           E +Q+ANIIQVNHHG  GCDMWG
Sbjct: 301 EGIQNANIIQVNHHGVSGCDMWG 322

[Close]

BLAST of Sed0004142 vs. ExPASy Swiss-Prot
Match: Q94A57 (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.8e-45
Identity = 111/228 (48.68%), Postives = 146/228 (64.04%), Query Frame = 0


Query: 21  DPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 80
           D CLVLT+DPKPRLRWT +LHERF+DAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 31  DACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 90

Query: 81  QKYRLGKQSGKEMGEASKDGAYLLESPSTNNFSPD---LPISEMADGCEVKEALRAQMEV 140
           QK+RLG+Q+GKE  E SKD + + ES  T + S     +   E  +G +V EALRAQMEV
Sbjct: 91  QKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQMEV 150

Query: 141 QSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESDSKKSQGLDHRG 200
           Q +LH Q+E ++ L++R +A+ +YL ++LE+ACK   +Q    A  E+  ++   L  + 
Sbjct: 151 QRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELAIKV 210

Query: 201 PRSSSVDPLGFYASQSQEMERVNGTEAQA--NLPCHRADCSTESCLTS 243
             SS    + ++ +    M       A A  N      +CS ES LTS
Sbjct: 211 SNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

[Close]

BLAST of Sed0004142 vs. ExPASy Swiss-Prot
Match: Q8LAJ7 (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-44
Identity = 111/240 (46.25%), Postives = 153/240 (63.75%), Query Frame = 0


Query: 21  DPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 80
           D CLVLT+DPKPRLRWT++LHERF+DAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 81  QKYRLGKQSGKEMGEASKDGAYLLESPSTNNFSPD---LPISEMADGCEVKEALRAQMEV 140
           QK+RLG+QS KE  + SKD + + ES  T + S     L   E  +  +V EALRAQMEV
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEV 146

Query: 141 QSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESDSKKSQGLDHRG 200
           Q +LH Q+E ++ L++R +A+ +YL ++LE+ACK + +Q +  A  E+  ++   L  + 
Sbjct: 147 QRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEAAREELSELAIKA 206

Query: 201 PRSSSVDPLGFYASQSQEMERVNGTEAQANLPCHRADCSTESCLTSNE--SPGAGLNMEK 255
             ++     G  ++       +      A    H+ +CS ES LTS+   SP +   M+K
Sbjct: 207 SITNGCQ--GTTSTFDTTKMMIPSLSELAVAIEHKNNCSAESSLTSSTVGSPVSAALMKK 264

[Close]

BLAST of Sed0004142 vs. ExPASy Swiss-Prot
Match: Q9SAK5 (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-36
Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 18  VASDPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLK 77
           V  D  LVLT+DPKPRLRWT +LHERF+DAV QLGG  KATPK IMR M VKGLTL+HLK
Sbjct: 21  VQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLK 80

Query: 78  SHLQKYRLGKQSGKEMGE-ASKDGAYLLESPSTNNFSPDLPISEMADGCEVKEALRAQME 137
           SHLQK+RLGKQ  KE G+ ++K+G+         N +        + G   +     QME
Sbjct: 81  SHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQME 140

Query: 138 VQSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVS 183
           VQ +LH Q+E ++HL++R +A+ +Y+ ++LERAC+ LA + +  A +
Sbjct: 141 VQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAATA 180

[Close]

BLAST of Sed0004142 vs. ExPASy Swiss-Prot
Match: Q9SQQ9 (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-36
Identity = 100/242 (41.32%), Postives = 146/242 (60.33%), Query Frame = 0


Query: 14  IHGAVASDPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTL 73
           + G    D  L+L++D KPRL+WT DLHERFI+AV QLGGA KATPK IM+ M + GLTL
Sbjct: 28  LRGNSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTL 87

Query: 74  FHLKSHLQKYRLGKQ-SGKEMGEASKDGAYLL---ESPSTNNF-SPDLPISEMAD-GCEV 133
           +HLKSHLQKYRL K  +G+     +K G   +   ++P  +   S +L I    +    +
Sbjct: 88  YHLKSHLQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPI 147

Query: 134 KEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESD- 193
            EAL+ Q+EVQ +LH Q+E ++HL++R +A+ +YL ++LE+A + L  Q +G A  E+  
Sbjct: 148 GEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAK 207

Query: 194 ---SKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGTEAQANLPCHRADCSTESCLTS 245
              S+    +    P SS ++P        +E++ +   + Q N P    DCS ESCLTS
Sbjct: 208 VQLSELVSKVSAEYPNSSFLEP--------KELQNLCSQQMQTNYP---PDCSLESCLTS 258

[Close]

BLAST of Sed0004142 vs. ExPASy Swiss-Prot
Match: E5L8F7 (Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-35
Identity = 92/192 (47.92%), Postives = 118/192 (61.46%), Query Frame = 0


Query: 18  VASDPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLK 77
           V  D  LVLT+DPKPRLRWT +LHERF+DAVTQLGG  KATPK IMR M VKGLTL+HLK
Sbjct: 22  VQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLK 81

Query: 78  SHLQKYRLGKQSGKEMGEAS-KDGAYLLESPSTNNFSPDLPISEMADGCEVKEALRAQME 137
           SHLQK+RLGKQ  KE  + S KDG       S      +   S    G  + E    Q+E
Sbjct: 82  SHLQKFRLGKQPHKEFNDHSIKDGM----RASALELQRNTASSSAMIGRNMNE---MQIE 141

Query: 138 VQSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESDSKKSQGLDHR 197
           VQ +LH Q+E +KHL++R +A+ +Y+ ++LE+A + LA + +  A +       Q +   
Sbjct: 142 VQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNLKGIGPQTIPDM 201

Query: 198 GPRSSSVDPLGF 208
           G       PLGF
Sbjct: 202 GIMKEFGSPLGF 206

[Close]

BLAST of Sed0004142 vs. ExPASy TrEMBL
Match: A0A1S4DTK9 (LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX=3656 GN=LOC103485209 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.3e-147
Identity = 273/314 (86.94%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIH---GAVAS--------DPCLVLTSDPKPRLRWTADLHERFIDAVT 60
           M+PRLVNPDGDIQIH   G+VAS        DPCLVLTSDPKPRLRWTADLHERF+DAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGK+MGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERAC 180
           NNFSPDLPISEMADG EVKEALRAQMEVQSKLHLQVEAEKHL+IR+DAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT-EAQANLP 240
           KMLADQFI GAVS+SDSKKS+G D + PRS+S+DPLGFY +QSQEMERVNGT E QANLP
Sbjct: 181 KMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLP 240

Query: 241 CHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANII 300
           C RADCSTESCLTSNESPG GL MEKSPVASKKN+VNLDSATASLIWS+AKE +Q+ANII
Sbjct: 241 CQRADCSTESCLTSNESPG-GLAMEKSPVASKKNMVNLDSATASLIWSDAKEGIQNANII 300

Query: 301 QVNHHGALGCDMWG 303
           QVNHHG  GCDMWG
Sbjct: 301 QVNHHGVSGCDMWG 313

[Close]

BLAST of Sed0004142 vs. ExPASy TrEMBL
Match: A0A6J1BUV8 (protein PHR1-LIKE 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005571 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.4e-146
Identity = 269/312 (86.22%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIHGAVAS---------DPCLVLTSDPKPRLRWTADLHERFIDAVTQL 60
           M+PRLVNPD DIQIHG   S         DPCLVLTSDPKPRLRWTADLHERF+DAVTQL
Sbjct: 1   MFPRLVNPDSDIQIHGGRGSATSDLTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQL 60

Query: 61  GGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPSTNN 120
           GGA KATPKAIMRTMNVKGLTLFHLKSHLQK+RLGKQSGK+MGE SKDGAYLLESPSTNN
Sbjct: 61  GGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEGSKDGAYLLESPSTNN 120

Query: 121 FSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERACKM 180
           FSPDLPISEMA+G EVKEALRAQMEVQSKLHLQVEAEKHLRIR+DAERRYLAMLERACKM
Sbjct: 121 FSPDLPISEMAEGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKM 180

Query: 181 LADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT-EAQANLPCH 240
           LADQFIGGAVS+SDSKKSQGLD + PRSSSVDPLGFYASQSQEMER+NGT E QANLP  
Sbjct: 181 LADQFIGGAVSDSDSKKSQGLDRKSPRSSSVDPLGFYASQSQEMERMNGTEEVQANLPYQ 240

Query: 241 RADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANIIQV 300
           RADCSTESCLTSNESPG GL MEKSPV S+K +VNLDS TASLIWSEAK+R+QDANIIQ+
Sbjct: 241 RADCSTESCLTSNESPG-GLTMEKSPVGSQKKMVNLDSVTASLIWSEAKDRIQDANIIQI 300

Query: 301 NHHGALGCDMWG 303
           NHH A GCDMWG
Sbjct: 301 NHHSASGCDMWG 311

[Close]

BLAST of Sed0004142 vs. ExPASy TrEMBL
Match: A0A0A0KL09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510300 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 7.1e-146
Identity = 271/314 (86.31%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIH---GAVAS--------DPCLVLTSDPKPRLRWTADLHERFIDAVT 60
           M+PRLVNPDGDIQIH   G+VAS        DPCLVLTSDPKPRLRWTADLHERF+DAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGK+MGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVEAEKHLRIREDAERRYLAMLERAC 180
           NNFSPDLPISEMADG EVKEALRAQMEVQSKLHLQVEAEKHL+IR+DAERRYLAMLERAC
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYLAMLERAC 180

Query: 181 KMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT-EAQANLP 240
           KMLADQFI GAVS+SDSKKS+G D + PRS+S+DPLGFY +QSQEMERVNGT E QANLP
Sbjct: 181 KMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLP 240

Query: 241 CHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKERLQDANII 300
           C RADCSTESCLTSNESPG GL MEKSP ASKKN+VNL SATASLIWS AKE +Q+ANII
Sbjct: 241 CQRADCSTESCLTSNESPG-GLAMEKSPAASKKNMVNLGSATASLIWSGAKEGIQNANII 300

Query: 301 QVNHHGALGCDMWG 303
           QVNHHG  GCDMWG
Sbjct: 301 QVNHHGVSGCDMWG 313

[Close]

BLAST of Sed0004142 vs. ExPASy TrEMBL
Match: A0A5A7SIG3 (Protein PHR1-LIKE 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00480 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.7e-145
Identity = 273/323 (84.52%), Postives = 289/323 (89.47%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIH---GAVAS--------DPCLVLTSDPKPRLRWTADLHERFIDAVT 60
           M+PRLVNPDGDIQIH   G+VAS        DPCLVLTSDPKPRLRWTADLHERF+DAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGK+MGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVE---------AEKHLRIREDAERR 180
           NNFSPDLPISEMADG EVKEALRAQMEVQSKLHLQVE         AEKHL+IR+DAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNG 240
           YLAMLERACKMLADQFI GAVS+SDSKKS+G D + PRS+S+DPLGFY +QSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 T-EAQANLPCHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAK 300
           T E QANLPC RADCSTESCLTSNESPG GL MEKSPVASKKN+VNLDSATASLIWS+AK
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPG-GLAMEKSPVASKKNMVNLDSATASLIWSDAK 300

Query: 301 ERLQDANIIQVNHHGALGCDMWG 303
           E +Q+ANIIQVNHHG  GCDMWG
Sbjct: 301 EGIQNANIIQVNHHGVSGCDMWG 322

[Close]

BLAST of Sed0004142 vs. ExPASy TrEMBL
Match: A0A6J1BTB6 (protein PHR1-LIKE 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005571 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.1e-144
Identity = 269/321 (83.80%), Postives = 283/321 (88.16%), Query Frame = 0


Query: 1   MYPRLVNPDGDIQIHGAVAS---------DPCLVLTSDPKPRLRWTADLHERFIDAVTQL 60
           M+PRLVNPD DIQIHG   S         DPCLVLTSDPKPRLRWTADLHERF+DAVTQL
Sbjct: 1   MFPRLVNPDSDIQIHGGRGSATSDLTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQL 60

Query: 61  GGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKEMGEASKDGAYLLESPSTNN 120
           GGA KATPKAIMRTMNVKGLTLFHLKSHLQK+RLGKQSGK+MGE SKDGAYLLESPSTNN
Sbjct: 61  GGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEGSKDGAYLLESPSTNN 120

Query: 121 FSPDLPISEMADGCEVKEALRAQMEVQSKLHLQVE---------AEKHLRIREDAERRYL 180
           FSPDLPISEMA+G EVKEALRAQMEVQSKLHLQVE         AEKHLRIR+DAERRYL
Sbjct: 121 FSPDLPISEMAEGYEVKEALRAQMEVQSKLHLQVELADLTIVGQAEKHLRIRQDAERRYL 180

Query: 181 AMLERACKMLADQFIGGAVSESDSKKSQGLDHRGPRSSSVDPLGFYASQSQEMERVNGT- 240
           AMLERACKMLADQFIGGAVS+SDSKKSQGLD + PRSSSVDPLGFYASQSQEMER+NGT 
Sbjct: 181 AMLERACKMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSVDPLGFYASQSQEMERMNGTE 240

Query: 241 EAQANLPCHRADCSTESCLTSNESPGAGLNMEKSPVASKKNVVNLDSATASLIWSEAKER 300
           E QANLP  RADCSTESCLTSNESPG GL MEKSPV S+K +VNLDS TASLIWSEAK+R
Sbjct: 241 EVQANLPYQRADCSTESCLTSNESPG-GLTMEKSPVGSQKKMVNLDSVTASLIWSEAKDR 300

Query: 301 LQDANIIQVNHHGALGCDMWG 303
           +QDANIIQ+NHH A GCDMWG
Sbjct: 301 IQDANIIQINHHSASGCDMWG 320

[Close]

BLAST of Sed0004142 vs. TAIR 10
Match: AT3G24120.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 4.8e-46
Identity = 111/228 (48.68%), Postives = 146/228 (64.04%), Query Frame = 0


Query: 21  DPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 80
           D CLVLT+DPKPRLRWT +LHERF+DAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 31  DACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 90

Query: 81  QKYRLGKQSGKEMGEASKDGAYLLESPSTNNFSPD---LPISEMADGCEVKEALRAQMEV 140
           QK+RLG+Q+GKE  E SKD + + ES  T + S     +   E  +G +V EALRAQMEV
Sbjct: 91  QKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQMEV 150

Query: 141 QSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESDSKKSQGLDHRG 200
           Q +LH Q+E ++ L++R +A+ +YL ++LE+ACK   +Q    A  E+  ++   L  + 
Sbjct: 151 QRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELAIKV 210

Query: 201 PRSSSVDPLGFYASQSQEMERVNGTEAQA--NLPCHRADCSTESCLTS 243
             SS    + ++ +    M       A A  N      +CS ES LTS
Sbjct: 211 SNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

[Close]

BLAST of Sed0004142 vs. TAIR 10
Match: AT4G13640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-45
Identity = 111/240 (46.25%), Postives = 153/240 (63.75%), Query Frame = 0


Query: 21  DPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 80
           D CLVLT+DPKPRLRWT++LHERF+DAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 81  QKYRLGKQSGKEMGEASKDGAYLLESPSTNNFSPD---LPISEMADGCEVKEALRAQMEV 140
           QK+RLG+QS KE  + SKD + + ES  T + S     L   E  +  +V EALRAQMEV
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEV 146

Query: 141 QSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESDSKKSQGLDHRG 200
           Q +LH Q+E ++ L++R +A+ +YL ++LE+ACK + +Q +  A  E+  ++   L  + 
Sbjct: 147 QRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEAAREELSELAIKA 206

Query: 201 PRSSSVDPLGFYASQSQEMERVNGTEAQANLPCHRADCSTESCLTSNE--SPGAGLNMEK 255
             ++     G  ++       +      A    H+ +CS ES LTS+   SP +   M+K
Sbjct: 207 SITNGCQ--GTTSTFDTTKMMIPSLSELAVAIEHKNNCSAESSLTSSTVGSPVSAALMKK 264

[Close]

BLAST of Sed0004142 vs. TAIR 10
Match: AT3G24120.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-44
Identity = 111/231 (48.05%), Postives = 146/231 (63.20%), Query Frame = 0


Query: 21  DPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 80
           D CLVLT+DPKPRLRWT +LHERF+DAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 31  DACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 90

Query: 81  QKYRLGKQSGKEMGEASKDGAYLLESPSTNNFSPD---LPISEMADGCEVKEALRAQMEV 140
           QK+RLG+Q+GKE  E SKD + + ES  T + S     +   E  +G +V EALRAQMEV
Sbjct: 91  QKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQMEV 150

Query: 141 QSKLHLQVE---AEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESDSKKSQGLD 200
           Q +LH Q+E    ++ L++R +A+ +YL ++LE+ACK   +Q    A  E+  ++   L 
Sbjct: 151 QRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELA 210

Query: 201 HRGPRSSSVDPLGFYASQSQEMERVNGTEAQA--NLPCHRADCSTESCLTS 243
            +   SS    + ++ +    M       A A  N      +CS ES LTS
Sbjct: 211 IKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 261

[Close]

BLAST of Sed0004142 vs. TAIR 10
Match: AT4G13640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 5.9e-44
Identity = 111/243 (45.68%), Postives = 153/243 (62.96%), Query Frame = 0


Query: 21  DPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 80
           D CLVLT+DPKPRLRWT++LHERF+DAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 81  QKYRLGKQSGKEMGEASKDGAYLLESPSTNNFSPD---LPISEMADGCEVKEALRAQMEV 140
           QK+RLG+QS KE  + SKD + + ES  T + S     L   E  +  +V EALRAQMEV
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEV 146

Query: 141 QSKLHLQVE---AEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVSESDSKKSQGLD 200
           Q +LH Q+E    ++ L++R +A+ +YL ++LE+ACK + +Q +  A  E+  ++   L 
Sbjct: 147 QRRLHEQLEYTQVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEAAREELSELA 206

Query: 201 HRGPRSSSVDPLGFYASQSQEMERVNGTEAQANLPCHRADCSTESCLTSNE--SPGAGLN 255
            +   ++     G  ++       +      A    H+ +CS ES LTS+   SP +   
Sbjct: 207 IKASITNGCQ--GTTSTFDTTKMMIPSLSELAVAIEHKNNCSAESSLTSSTVGSPVSAAL 266

[Close]

BLAST of Sed0004142 vs. TAIR 10
Match: AT1G79430.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-37
Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 18  VASDPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLK 77
           V  D  LVLT+DPKPRLRWT +LHERF+DAV QLGG  KATPK IMR M VKGLTL+HLK
Sbjct: 21  VQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLK 80

Query: 78  SHLQKYRLGKQSGKEMGE-ASKDGAYLLESPSTNNFSPDLPISEMADGCEVKEALRAQME 137
           SHLQK+RLGKQ  KE G+ ++K+G+         N +        + G   +     QME
Sbjct: 81  SHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQME 140

Query: 138 VQSKLHLQVEAEKHLRIREDAERRYL-AMLERACKMLADQFIGGAVS 183
           VQ +LH Q+E ++HL++R +A+ +Y+ ++LERAC+ LA + +  A +
Sbjct: 141 VQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAATA 180

The following BLAST results are available for this feature:

BLAST of Sed0004142 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883093.1	4.4e-150	88.85	protein PHR1-LIKE 2-like isoform X1 [Benincasa hispida]	[more]
XP_016899337.1	2.7e-147	86.94	PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor APL-like [Cucumi...	[more]
XP_022132807.1	5.0e-146	86.22	protein PHR1-LIKE 2-like isoform X2 [Momordica charantia]	[more]
XP_011658095.1	1.5e-145	86.31	protein PHR1-LIKE 3 isoform X3 [Cucumis sativus]	[more]
KAA0025596.1	5.5e-145	84.52	protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa] >TYK12471.1 prote...	[more]

BLAST of Sed0004142 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A57	6.8e-45	48.68	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1	[more]
Q8LAJ7	2.0e-44	46.25	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1	[more]
Q9SAK5	2.0e-36	50.30	Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 ...	[more]
Q9SQQ9	2.0e-36	41.32	Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1	[more]
E5L8F7	1.7e-35	47.92	Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV...	[more]

BLAST of Sed0004142 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DTK9	1.3e-147	86.94	LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX...	[more]
A0A6J1BUV8	2.4e-146	86.22	protein PHR1-LIKE 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110055...	[more]
A0A0A0KL09	7.1e-146	86.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510300 PE=3 SV=1	[more]
A0A5A7SIG3	2.7e-145	84.52	Protein PHR1-LIKE 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1BTB6	5.1e-144	83.80	protein PHR1-LIKE 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110055...	[more]

BLAST of Sed0004142 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24120.1	4.8e-46	48.68	Homeodomain-like superfamily protein	[more]
AT4G13640.1	1.4e-45	46.25	Homeodomain-like superfamily protein	[more]
AT3G24120.2	2.0e-44	48.05	Homeodomain-like superfamily protein	[more]
AT4G13640.2	5.9e-44	45.68	Homeodomain-like superfamily protein	[more]
AT1G79430.2	1.4e-37	50.30	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 34..84 e-value: 5.7E-6 score: 26.4
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 31..86 e-value: 3.7E-23 score: 79.6
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 126..171 e-value: 1.9E-15 score: 56.3
None	No IPR available	GENE3D	1.10.10.60		coord: 30..88 e-value: 1.1E-28 score: 101.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..204
None	No IPR available	PANTHER	PTHR31499:SF55	MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 13..294
IPR044848	PHR1-like	PANTHER	PTHR31499	MYB FAMILY TRANSCRIPTION FACTOR PHL11	coord: 13..294
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 31..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004142.1	Sed0004142.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity