Sed0004129 (gene) Chayote v1

Overview


Name	Sed0004129
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Microtubule-binding protein TANGLED
Location	LG11: 3008527 .. 3012902 (-)
RNA-Seq Expression	Sed0004129
Synteny	Sed0004129

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATCTCATTTTTGTAGAGAGAGAAACTGAAAAACAAAATCATTTTTTGGCCCATCAATCTTAATGGGTATTTAGAGAGAGAGAAAAGAGAGATTTTTGCTTGGAAAAACTCCACTCAGGTGCTTCTTCAATTCAATCAAAATGGTTGCTAAATCCCCACCAAAGCAAAAGAAAATGGTAGCTTCAGCAGCAGCAGCAGCAGCCTCTTTGAATCCAGTTTTAGTCAGAGAAACTCTTAAGAAGGTAAATAAATAAATATATATATATATGAAAGAAAGCTCATGGTTTGGTTTCCCATTTGGAAAATTTTGATAAAAATTAGTTTTTTTTTTTTTTTTGTGATTCGAGTTATTAGATCATATATCATGTCGCTAGAGCTATGTTTTGGTTGGATAAGATATTTTGGTCCTTTTGTTTTGATTGATTTGTGTTTGTGCTCTGTTTCTTGTGTCTAAGTTTTGAGATGAGTTTCAGATCTCATCTGGGTTCTTCTGATTTTAGTTTTTTTCAGCTCAAATGATGTAAATTTTCCACTTTTGTTCATTTTCTCTAGGGAAACAGGGGTTGAATGGGATTTTGTGCATAATTTTCCATTTTTCTTTTGAATGAAACAGTTTCAGAAAGCTGTTTTATTCTTTGTAGTGTTTGTTTTGTGTCTGAAATTAATTTGGGGGAGAAACTGTGGATCCAATTTGGGTTCTTCATTTTGGTATATTTTCTCAGCACAAAGGTTGAAAATTTATATTATTTACCTTCTTAAGAAACGAACATTCTAATATTGGATTTCCCCAGCTCAAGTTCAGGTTCAATATTTGGAGAATCCATAAATGGAGGAAACTTTTAGCAAATCCAAGATGGAACAAACCTTTAGTATTTTTCTTTATAAATCTTTGGATTAACTTCCTTTCTCTTTCTCTATTGGGGAGGCCATGAACATGTTATTTTGCTTATGAATTGTGAAAACAATGGTTCTATGCTTCATTATGTTTGTTTCTTCAATAATCCTGGAGAGAAACTGAAGGCCCATCTGGGTTATTCATCTTCAGTCTTATTATTTTCAGCTCAAGTTTTGGAAAAGATTGAATAAAAAACAAGAGATTGCATTCTCTAAATCATTTCTCTGAAGAAACATGGATTTAAAACTTAGTCCGACAACCGTTTGATTTTTAAAATTTAAGTTTGTTTTCATTCAAAATCTTGATAAAATTCCAAAAATCAAAATAAATTTTTGAAAACTACCTTTTTTTTTAGTTTTTAAAATTTGGTTTGTTTTTTTTAACATAGGTAAAATGAAATATGAAAGTAAAAATAAATAAATAAAAATAAAAAATAAGTTGGAATAGTTGTAGTTGACTTAATTTTTTAAAATGAAAATAGAATGATTATTTAATGGGATTTGAATTGTTATAACATAATCCTAAATAACAATCAAAGAATAAAAGGATGCGAGACAAAATATGCAATTACATGTTATTCATTAATAGTTTATTAGCTACATCTGCAAGGAGAGAAAAATATTAAATACTAGATGAAAGAGGTAAGAGGTTTAAGAGAATTAACATACCTCTCTTAAAACCTTAATAACATCAAACGCCCAAACATAAAATCTCAATATGAAAAATATAAACATAATCGATATACATTCTAGGTTTAATGTTTAGCGTGACTCTTTATCAAGTATGAATGTTCGTAGTGCAACAAAGTTCAAGACATTTCATGGCCAATCTTGTAAAGAACTTCCAATCCAATGATTCTATGAAGCCAAAACTCAACTCCCATTACAAAAATCAATATTGAACAAATTTTAGGTTTACATTCTAGGTTTAATGTTTAGCGTGACTCTTTAGCAAGTACGAATGTTCGTAGTGCAACAAAGTTCAAGACATCTCAATATGAAAAATATAAACATAATCGATATACATTCTAGGTTTAATGTTTAGCGTGACTCTTTATCAAGTATGAATGTTCGTAGTGCAACAAAGTTCAAGACATTTCATGGTCAATCTTGTAAAGAACTTCCAATCCAATGATTCTATGAAGCCAAAACTCAACTCCCATTACAAAAATCAATATTGAACAAATTTTTAGCTTCTTGTTCTTACCATTTTAGACCATTTTTCCTAGGTGGAGATGTGCATGAATAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGAAACAAAGTGATATCTGGGGTGAGCCTTAGCCCACGTAGCACCAGAGCCTATCTTAAGACAAGTCTCAGATGCAAACAGGAATCTGCAAGGTACCATTTTGTTTCAACTTTTTTTTATTGATTTTGTTTTGAAGTTTATGTTTTTTACTCAAATGGGTTGTTCTTTGTTTTCAACTTTGAAGGAACAAAAATGGCGGTGGAAGGAAATCTCCAGTAGGGAAGTTTCCAGCAAATGCAGAAGGTCTCTTCTTTTAACTTCTATTATGGATTGAACTTTCTGTGTGGTTTCACTTTCACTTTTGAAATTTGTTGTTTCCTTCTATTTGGTTAGTTTCAAGTTACAATAAAAAGTAGTAGCTACCTTCTAAAAACACATATTTGAGTTATATCAAAATCTTAGTGTGATCACCTACAGAATCAGTTTGAATAATTGGCTAGTTGAAAATGTTGGGCATCCCAAATATTATGGTTTATATTTTTTAAAGGAAACTTATTTAATTCTTAACCAAATTCCAAAAAGAAAAACAAGTTTTTTTTTAGTAGTACAATATTGAAGGATGATAATCTGTGATTTCTGAGTCAAAAATACATATTAATGACCACTAGACTTTAGGTTGTTTTAGTTTTTAAGAACTTTTTGGTTTAGGTTGAATATCCCTTCATTTTATATAAATCAAATGCTTCCTGCTTGATAGTTAATGGTATTGTGCATTTTGAATCTACTGTTTATAATTTTTTGTTTTAGAAGAATAAGGTAATATAAATAAGTAATTTGTGAGAACACATGAAAAGAAAACAAAATTTTGAAAATAGTTACCTTATGTCTCTAGAAACCAGGAAATTTTATCCTAAAAGTGAACATTTTTTATGTTGGAAAGTGATGTAATAATAATGTCAGGGGAGTGGCAGAGGATGTCTTTACCAGCAATGCTTGTGGGTGAAACCATTGGGGAAATACTCACTGCAAGCAAATTTGCAAGAGAAATGGTTGAAGCAGTTACCAACAACACACAAAACACGACAATGGATGACCCGAAAACTCCCTTAACACGACAAAGAAACCGCAGACCGAACCTCGAAGATTCAGAATTAAGGGCAAAAAGAAAGAGAGAAAAGCAAGAAAAAAAGCAATCAAAACTAAATGAATCACACTCTCCAGAGCTTCAACGCGTTCGGTCCCGGATCAACTTCAAGGTTGTTTCACCTCCAACCAAAAGAAATGTTGTTGATAAAGAGAATGCACGGTATATGGCGAATCGAGTGTCGCCTAGGAACCGGCCATGGACAAAGGCAGTACTTTTTCCAAACCCTTTATTCCTATCATCAGATAATCCCCAACAACAACCAAAGTTTTGCAGAACAAAGTCTCCTGTGATCACAAAAACTAGACAACAACAAACCCCACACAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATCAGGAGCCCACCAGTGGTGATAACTCGATCGCCGACGAAACCAGTGGTATTCACACGATCGCCACCAAGGCCAGTGAGCTCGAGCAAGCTGTCTCCAAAGAGATCTGCAGCCTCTAAGATGTATCGACCATTTTCGCCATTGAGGCTACTAGCTTCCAAGAAACCATTCTCACCTGCACGATCGCCGTCGAGACCGGTGGTGATCACACGATCTCCCCCAAGAGTAGTAGGCTTGAGCAAGCTGTCTCCAAAGAGATCTGCAGCCTCTCAGCTACGTCGATCATTTTCGCCATCAAGGCTGCTGGTAGCTTCCAAGAAATCATTCTCACCTGCAAGAATGACAGCTTCCAAGCTGAGGCAATCATTCTCACCTTCAAGACTGGCAGCTAGATTGATATCTCCACTGAAAAGCAGAAAAAGTGTACAGAAGTTTGATGATGGCATATCAATGAGTGGCTTGAAACAGAGACCAAACAACATAGTACAAATGAGAATTTGAGAGGAAGCTTTGGGGAGGGCAAGTTGTTATAAAGTCGTTATAAAAATACTCATTCTTTTGCTTGATATTTTCTCAATGTCCATAGTGTTTTTCAGGTGTTTGTGTGATCCATTTCCTATCACATCTGTATCAGTTTGTGAACAAATCAATAAAACAAGCTTGAAAACGTACCTTTTTCTTTGAAGTTTTTCCTATCAATCATAAAGTGCCTCTCAGGTTTTTTCAAGTTGTTAATGTAAGAG

mRNA sequence

CCAATCTCATTTTTGTAGAGAGAGAAACTGAAAAACAAAATCATTTTTTGGCCCATCAATCTTAATGGGTATTTAGAGAGAGAGAAAAGAGAGATTTTTGCTTGGAAAAACTCCACTCAGGTGCTTCTTCAATTCAATCAAAATGGTTGCTAAATCCCCACCAAAGCAAAAGAAAATGGTAGCTTCAGCAGCAGCAGCAGCAGCCTCTTTGAATCCAGTTTTAGTCAGAGAAACTCTTAAGAAGGTGGAGATGTGCATGAATAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGAAACAAAGTGATATCTGGGGTGAGCCTTAGCCCACGTAGCACCAGAGCCTATCTTAAGACAAGTCTCAGATGCAAACAGGAATCTGCAAGGAACAAAAATGGCGGTGGAAGGAAATCTCCAGTAGGGAAGTTTCCAGCAAATGCAGAAGGGGAGTGGCAGAGGATGTCTTTACCAGCAATGCTTGTGGGTGAAACCATTGGGGAAATACTCACTGCAAGCAAATTTGCAAGAGAAATGGTTGAAGCAGTTACCAACAACACACAAAACACGACAATGGATGACCCGAAAACTCCCTTAACACGACAAAGAAACCGCAGACCGAACCTCGAAGATTCAGAATTAAGGGCAAAAAGAAAGAGAGAAAAGCAAGAAAAAAAGCAATCAAAACTAAATGAATCACACTCTCCAGAGCTTCAACGCGTTCGGTCCCGGATCAACTTCAAGGTTGTTTCACCTCCAACCAAAAGAAATGTTGTTGATAAAGAGAATGCACGGTATATGGCGAATCGAGTGTCGCCTAGGAACCGGCCATGGACAAAGGCAGTACTTTTTCCAAACCCTTTATTCCTATCATCAGATAATCCCCAACAACAACCAAAGTTTTGCAGAACAAAGTCTCCTGTGATCACAAAAACTAGACAACAACAAACCCCACACAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATCAGGAGCCCACCAGTGGTGATAACTCGATCGCCGACGAAACCAGTGGTATTCACACGATCGCCACCAAGGCCAGTGAGCTCGAGCAAGCTGTCTCCAAAGAGATCTGCAGCCTCTAAGATGTATCGACCATTTTCGCCATTGAGGCTACTAGCTTCCAAGAAACCATTCTCACCTGCACGATCGCCGTCGAGACCGGTGGTGATCACACGATCTCCCCCAAGAGTAGTAGGCTTGAGCAAGCTGTCTCCAAAGAGATCTGCAGCCTCTCAGCTACGTCGATCATTTTCGCCATCAAGGCTGCTGGTAGCTTCCAAGAAATCATTCTCACCTGCAAGAATGACAGCTTCCAAGCTGAGGCAATCATTCTCACCTTCAAGACTGGCAGCTAGATTGATATCTCCACTGAAAAGCAGAAAAAGTGTACAGAAGTTTGATGATGGCATATCAATGAGTGGCTTGAAACAGAGACCAAACAACATAGTACAAATGAGAATTTGAGAGGAAGCTTTGGGGAGGGCAAGTTGTTATAAAGTCGTTATAAAAATACTCATTCTTTTGCTTGATATTTTCTCAATGTCCATAGTGTTTTTCAGGTGTTTGTGTGATCCATTTCCTATCACATCTGTATCAGTTTGTGAACAAATCAATAAAACAAGCTTGAAAACGTACCTTTTTCTTTGAAGTTTTTCCTATCAATCATAAAGTGCCTCTCAGGTTTTTTCAAGTTGTTAATGTAAGAG

Coding sequence (CDS)

ATGGTTGCTAAATCCCCACCAAAGCAAAAGAAAATGGTAGCTTCAGCAGCAGCAGCAGCAGCCTCTTTGAATCCAGTTTTAGTCAGAGAAACTCTTAAGAAGGTGGAGATGTGCATGAATAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGAAACAAAGTGATATCTGGGGTGAGCCTTAGCCCACGTAGCACCAGAGCCTATCTTAAGACAAGTCTCAGATGCAAACAGGAATCTGCAAGGAACAAAAATGGCGGTGGAAGGAAATCTCCAGTAGGGAAGTTTCCAGCAAATGCAGAAGGGGAGTGGCAGAGGATGTCTTTACCAGCAATGCTTGTGGGTGAAACCATTGGGGAAATACTCACTGCAAGCAAATTTGCAAGAGAAATGGTTGAAGCAGTTACCAACAACACACAAAACACGACAATGGATGACCCGAAAACTCCCTTAACACGACAAAGAAACCGCAGACCGAACCTCGAAGATTCAGAATTAAGGGCAAAAAGAAAGAGAGAAAAGCAAGAAAAAAAGCAATCAAAACTAAATGAATCACACTCTCCAGAGCTTCAACGCGTTCGGTCCCGGATCAACTTCAAGGTTGTTTCACCTCCAACCAAAAGAAATGTTGTTGATAAAGAGAATGCACGGTATATGGCGAATCGAGTGTCGCCTAGGAACCGGCCATGGACAAAGGCAGTACTTTTTCCAAACCCTTTATTCCTATCATCAGATAATCCCCAACAACAACCAAAGTTTTGCAGAACAAAGTCTCCTGTGATCACAAAAACTAGACAACAACAAACCCCACACAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATCAGGAGCCCACCAGTGGTGATAACTCGATCGCCGACGAAACCAGTGGTATTCACACGATCGCCACCAAGGCCAGTGAGCTCGAGCAAGCTGTCTCCAAAGAGATCTGCAGCCTCTAAGATGTATCGACCATTTTCGCCATTGAGGCTACTAGCTTCCAAGAAACCATTCTCACCTGCACGATCGCCGTCGAGACCGGTGGTGATCACACGATCTCCCCCAAGAGTAGTAGGCTTGAGCAAGCTGTCTCCAAAGAGATCTGCAGCCTCTCAGCTACGTCGATCATTTTCGCCATCAAGGCTGCTGGTAGCTTCCAAGAAATCATTCTCACCTGCAAGAATGACAGCTTCCAAGCTGAGGCAATCATTCTCACCTTCAAGACTGGCAGCTAGATTGATATCTCCACTGAAAAGCAGAAAAAGTGTACAGAAGTTTGATGATGGCATATCAATGAGTGGCTTGAAACAGAGACCAAACAACATAGTACAAATGAGAATTTGA

Protein sequence

MVAKSPPKQKKMVASAAAAAASLNPVLVRETLKKVEMCMNRLQELQFTVTGGNKVISGVSLSPRSTRAYLKTSLRCKQESARNKNGGGRKSPVGKFPANAEGEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNNTQNTTMDDPKTPLTRQRNRRPNLEDSELRAKRKREKQEKKQSKLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARYMANRVSPRNRPWTKAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRLLASKKPFSPARSPSRPVVITRSPPRVVGLSKLSPKRSAASQLRRSFSPSRLLVASKKSFSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI

Homology

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BLAST of Sed0004129 vs. NCBI nr
Match: XP_011648821.1 (microtubule-binding protein TANGLED [Cucumis sativus] >KAE8651599.1 hypothetical protein Csa_023440 [Cucumis sativus])

HSP 1 Score: 453.4 bits (1165), Expect = 1.9e-123
Identity = 266/360 (73.89%), Postives = 294/360 (81.67%), Query Frame = 0


Query: 9   MSGEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNNT--QNTTMDDPKTPLTRQRNR 68
           + GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN+  +NT+MDDPKTPLTRQRNR
Sbjct: 100 VGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNSTNKNTSMDDPKTPLTRQRNR 159

Query: 69  RPNLEDSELRAKRKREKQEKKQSK-LNESHSPELQRVRSRINFKVVSPPTKRNVVDKENA 128
           +PNLEDSELRA+RKREKQEK QSK +  SHSP LQRVRSRINFKVVSPPTKR+VVDKENA
Sbjct: 160 KPNLEDSELRARRKREKQEKFQSKRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENA 219

Query: 129 RYMANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLI 188
           RY+ANRVSPRNRPWT K +LFPNPLFLSSDNP QQPKFCRTKSPVI KTR QQTPHKFLI
Sbjct: 220 RYLANRVSPRNRPWTKKTILFPNPLFLSSDNPSQQPKFCRTKSPVIAKTR-QQTPHKFLI 279

Query: 189 KSPASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPL 248
           KSP SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                   
Sbjct: 280 KSPVSASKFQVKI-SPPVVIKRSPTRPVVITRSPRRPVVIT------------------- 339

Query: 249 RLLASKKPFSPARSPSRPVVITRSPPRVVGLSKLSPKRS-AASQLRRSFSPSRLLVAS-K 308
                       RSP+RPV+ITRSP R +  SKLSPKRS   S+LRRSFSPSRL+ +  +
Sbjct: 340 ------------RSPTRPVMITRSPTRQISSSKLSPKRSTVVSKLRRSFSPSRLVASKLR 399

Query: 309 KSFSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           + FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 400 QPFSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGLKQRPINNIQMRI 426

[Close]

BLAST of Sed0004129 vs. NCBI nr
Match: TYK18310.1 (microtubule-binding protein TANGLED [Cucumis melo var. makuwa])

HSP 1 Score: 452.2 bits (1162), Expect = 4.2e-123
Identity = 266/358 (74.30%), Postives = 293/358 (81.84%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNN--TQNTTMDDPKTPLTRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN   +NT+MDDPKTPLTRQRNR+P
Sbjct: 106 GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKP 165

Query: 71  NLEDSELRAKRKREKQEKKQS-KLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARY 130
           NLEDSELRA+RKREKQEK QS ++  SHSP LQRVRSRINFKVVSPPTKR+VVDKENARY
Sbjct: 166 NLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENARY 225

Query: 131 MANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKS 190
           +ANRVSPRNRPWT K +LFPNPLFLSSDN  QQPKFCRTKSPVI KTR QQTPHKFLIKS
Sbjct: 226 LANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTR-QQTPHKFLIKS 285

Query: 191 PASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRL 250
           P SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                     
Sbjct: 286 PVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVIT--------------------- 345

Query: 251 LASKKPFSPARSPSRPVVITRSPPR-VVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKS 310
                     RSP+RPVVITRSP R ++  SKLSPKRS AS+LRRSFSPSRL+ +  ++ 
Sbjct: 346 ----------RSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQP 405

Query: 311 FSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 406 FSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Sed0004129 vs. NCBI nr
Match: KAA0047966.1 (microtubule-binding protein TANGLED [Cucumis melo var. makuwa])

HSP 1 Score: 452.2 bits (1162), Expect = 4.2e-123
Identity = 266/358 (74.30%), Postives = 293/358 (81.84%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNN--TQNTTMDDPKTPLTRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN   +NT+MDDPKTPLTRQRNR+P
Sbjct: 95  GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKP 154

Query: 71  NLEDSELRAKRKREKQEKKQS-KLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARY 130
           NLEDSELRA+RKREKQEK QS ++  SHSP LQRVRSRINFKVVSPPTKR+VVDKENARY
Sbjct: 155 NLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENARY 214

Query: 131 MANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKS 190
           +ANRVSPRNRPWT K +LFPNPLFLSSDN  QQPKFCRTKSPVI KTR QQTPHKFLIKS
Sbjct: 215 LANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTR-QQTPHKFLIKS 274

Query: 191 PASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRL 250
           P SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                     
Sbjct: 275 PVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVIT--------------------- 334

Query: 251 LASKKPFSPARSPSRPVVITRSPPR-VVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKS 310
                     RSP+RPVVITRSP R ++  SKLSPKRS AS+LRRSFSPSRL+ +  ++ 
Sbjct: 335 ----------RSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQP 394

Query: 311 FSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 395 FSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 419

[Close]

BLAST of Sed0004129 vs. NCBI nr
Match: XP_008454676.1 (PREDICTED: microtubule-binding protein TANGLED [Cucumis melo] >ABR67412.1 microtubule binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 446.8 bits (1148), Expect = 1.8e-121
Identity = 264/358 (73.74%), Postives = 291/358 (81.28%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNN--TQNTTMDDPKTPLTRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN   +NT+MDDPKTPLTRQRNR+P
Sbjct: 106 GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKP 165

Query: 71  NLEDSELRAKRKREKQEKKQS-KLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARY 130
           NLEDSELRA+RKREKQEK QS ++  SHSP LQRVRSRINFKVVSPPTKR+VVDKENA Y
Sbjct: 166 NLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENAGY 225

Query: 131 MANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKS 190
           +ANRVSPRNRPWT K +LFPNPLFLSSDN  QQPKFCRTKSPVI KTR QQTPHKFLIKS
Sbjct: 226 LANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTR-QQTPHKFLIKS 285

Query: 191 PASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRL 250
           P SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                     
Sbjct: 286 PVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVIT--------------------- 345

Query: 251 LASKKPFSPARSPSRPVVITRSPPR-VVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKS 310
                     RSP+RPVVITRSP R ++  SKLSPKRS AS+LR SFSPSRL+ +  ++ 
Sbjct: 346 ----------RSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRPSFSPSRLVASKLRQP 405

Query: 311 FSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 406 FSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Sed0004129 vs. NCBI nr
Match: XP_038877022.1 (microtubule-binding protein TANGLED [Benincasa hispida])

HSP 1 Score: 434.9 bits (1117), Expect = 6.9e-118
Identity = 259/356 (72.75%), Postives = 280/356 (78.65%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNNT-QNTTMDDPKTPL-TRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNNT +NT+MDDPKTPL TRQRNR+P
Sbjct: 100 GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNTNKNTSMDDPKTPLTTRQRNRKP 159

Query: 71  NLEDSELRAKRKREKQEKKQSKLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARYM 130
           N+EDSELRA+RKREKQEK QSK  ESHSP LQRVRSRINFKVVSPPTKR+VVDKENARYM
Sbjct: 160 NIEDSELRARRKREKQEKFQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYM 219

Query: 131 ANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKSP 190
           ANRVSPRNRPWT K +LFPNPLFLS+DN  QQPKFCRTKSPVITKTR QQTPHKFLIKSP
Sbjct: 220 ANRVSPRNRPWTKKTILFPNPLFLSTDNSSQQPKFCRTKSPVITKTR-QQTPHKFLIKSP 279

Query: 191 ASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRLL 250
            SASKFQVKI+SPPVVITRSPT                                      
Sbjct: 280 VSASKFQVKIKSPPVVITRSPT-------------------------------------- 339

Query: 251 ASKKPFSPARSPSRPVVITRSPPRVVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKSFS 310
                        RPVVIT SP R V L+K SPKRSAAS+LRRSFSPSRL+ +  ++ FS
Sbjct: 340 -------------RPVVITLSPTRQVSLNKQSPKRSAASKLRRSFSPSRLVASKLRQPFS 399

Query: 311 PARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           PAR+TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP NI QMRI
Sbjct: 400 PARLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGLKQRPINI-QMRI 402

[Close]

BLAST of Sed0004129 vs. ExPASy Swiss-Prot
Match: Q197W8 (Microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.6e-56
Identity = 180/388 (46.39%), Postives = 234/388 (60.31%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAV----TNNTQNTTM----DDPKTPLTR 70
           G+W++MSLPAML+GET+ EIL AS+  R++V+A+    +  ++  TM    D PKTP T+
Sbjct: 98  GDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKSRKSRRLTMSQEDDGPKTPETQ 157

Query: 71  QRNRRPNLE--DSELRAKRKREKQEKKQSKLNESHS-PELQRVRSRINFKVVSPPTKRNV 130
           Q++R  N E   S ++A+RK+EKQ ++    +ES S P LQR RSRI F+ +SP  K N 
Sbjct: 158 QKSREQNPETVSSNIKARRKKEKQNRR----SESDSPPSLQRARSRIAFRTISPQVKGN- 217

Query: 131 VDKENA-RYMANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKT---- 190
            + EN+ R++ANRVSP+++PW  KAVLFPNPLF+S     QQ KF RT SPVI +     
Sbjct: 218 -NGENSFRHLANRVSPKHKPWVKKAVLFPNPLFISG-TATQQAKFSRTMSPVIARNEISS 277

Query: 191 --RQQQTPHKFLIKS-PASASKFQVKIRSPPVVITRSPT--------KPVVFTRSPPRPV 250
               ++TP+KFLIKS P SASKFQVKIRSPP V+  SPT        K    +RSP R V
Sbjct: 278 IKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLV-SPTRNGSNSVRKSPRGSRSPTRTV 337

Query: 251 -------------SSSKLSPKRSAASKMYRPFSPLR---LLASKKPFSPARSPSRPVVIT 310
                        ++ K SPK S A+K+ R F+P R    LA K   SP R   +  +  
Sbjct: 338 NLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKRVTLQAFL-- 397

Query: 311 RSPPRVVGLSKLSPKRSAASQLRRSFSPSRLLVASKKSFSPARMTASKLRQSFSPSRLAA 355
            SP R     K SPK         S SP+R+   S+K       TA+K R+SFSPSRLA 
Sbjct: 398 -SPTRNGNFCKKSPK--------ASISPTRVCNKSQK-----LSTAAKFRRSFSPSRLAM 457

[Close]

BLAST of Sed0004129 vs. ExPASy Swiss-Prot
Match: Q84M91 (Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.4e-50
Identity = 168/370 (45.41%), Postives = 221/370 (59.73%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAV----TNNTQNTTM----DDPKTPLTR 70
           G+W++MSLPAML+GET+ EIL AS+  R++V+A+    +  ++  TM    D PKTP T+
Sbjct: 98  GDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKSRKSRRLTMSQEDDGPKTPETQ 157

Query: 71  QRNRRPNLE--DSELRAKRKREKQEKKQSKLNESHS-PELQRVRSRINFKVVSPPTKRNV 130
           Q++R  N E   S ++A+RK+EKQ ++    +ES S P LQR RSRI F+ +SP  K N 
Sbjct: 158 QKSREQNPETVSSNIKARRKKEKQNRR----SESDSPPSLQRARSRIAFRTISPQVKGN- 217

Query: 131 VDKENA-RYMANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKT---- 190
            + EN+ R++ANRVSP+++PW  KAVLFPNPLF+S     QQ KF RT SPVI +     
Sbjct: 218 -NGENSFRHLANRVSPKHKPWVKKAVLFPNPLFISG-TATQQAKFSRTMSPVIARNEISS 277

Query: 191 --RQQQTPHKFLIKS-PASASKFQVKIRSPPVVITRSPT--------KPVVFTRSPPRPV 250
               ++TP+KFLIKS P SASKFQVKIRSPP V+  SPT        K    +RSP R V
Sbjct: 278 IKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLV-SPTRNGSNSVRKSPRGSRSPTRTV 337

Query: 251 -------------SSSKLSPKRSAASKMYRPFSPLR---LLASKKPFSPARSPSRPVVIT 310
                        ++ K SPK S A+K+ R F+P R    LA K   SP R   +  +  
Sbjct: 338 NLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKRVTLQAFL-- 397

Query: 311 RSPPRVVGLSKLSPKRSAASQLRRSFSPSRLLVASKKSFSPARMTASKLRQSFSPSRLAA 337
            SP R     K SPK         S SP+R+   S+K       TA+K R+SFSPSRLA 
Sbjct: 398 -SPTRNGNFCKKSPK--------ASISPTRVCNKSQK-----LSTAAKFRRSFSPSRLAM 443

[Close]

BLAST of Sed0004129 vs. ExPASy Swiss-Prot
Match: Q9FUH9 (Microtubule-binding protein TANGLED1 OS=Zea mays OX=4577 GN=TAN1 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-26
Identity = 128/371 (34.50%), Postives = 162/371 (43.67%), Query Frame = 0


Query: 12  EWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNNTQNTTMDDPKTPLTRQRNRRPNL- 71
           +W+RMSLPAML+GET+ EI+ AS+FAR++V A       T  + P+TP    R R+P   
Sbjct: 109 QWRRMSLPAMLLGETVLEIVQASQFARDIVTA----AGATNREPPRTPKPAPRTRKPAAG 168

Query: 72  EDSELRAKRKREKQEKKQSK----LNESHSPELQRVRSRINFKVVSPPTKRNVVDKENAR 131
           E + LRA+R REKQ  +        + +  P   RVRSRI FK VSP      V      
Sbjct: 169 EPTPLRARRAREKQSHRGGAATRGADAATPPSRSRVRSRIQFKPVSP------VAVGRPS 228

Query: 132 YMANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPV-----ITKTRQ----Q 191
             ANRVSP+NRPW  KAV+FPNP F +S +    P  C T SP      + KTR     +
Sbjct: 229 VSANRVSPKNRPWAKKAVMFPNPTFHASTSAATDP--CATPSPSKKQKRLYKTRSPVAAR 288

Query: 192 QTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASK 251
           QTPHKFL+KSP SA                                              
Sbjct: 289 QTPHKFLVKSPPSA---------------------------------------------- 348

Query: 252 MYRPFSPLRLLASKKPFSPARSPSRPVVITRSPPRVVGLSKLSPKRSAASQLRRSFSPSR 311
                     L SK        P+RP  ++  PP                          
Sbjct: 349 ----------LGSKLRMHGKALPARPAAVSPPPP-------------------------- 377

Query: 312 LLVASKKSFSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDD------GISMSGL 362
                K   SPA+      R SFSPSRLA RL+SP+K+R S+ +  D      G  MSGL
Sbjct: 409 ----VKAQASPAKTR----RCSFSPSRLATRLMSPIKARLSLGRSRDSGVGVGGGPMSGL 377

[Close]

BLAST of Sed0004129 vs. ExPASy TrEMBL
Match: A0A5A7U154 (Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00260 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 2.0e-123
Identity = 266/358 (74.30%), Postives = 293/358 (81.84%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNN--TQNTTMDDPKTPLTRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN   +NT+MDDPKTPLTRQRNR+P
Sbjct: 95  GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKP 154

Query: 71  NLEDSELRAKRKREKQEKKQS-KLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARY 130
           NLEDSELRA+RKREKQEK QS ++  SHSP LQRVRSRINFKVVSPPTKR+VVDKENARY
Sbjct: 155 NLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENARY 214

Query: 131 MANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKS 190
           +ANRVSPRNRPWT K +LFPNPLFLSSDN  QQPKFCRTKSPVI KTR QQTPHKFLIKS
Sbjct: 215 LANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTR-QQTPHKFLIKS 274

Query: 191 PASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRL 250
           P SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                     
Sbjct: 275 PVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVIT--------------------- 334

Query: 251 LASKKPFSPARSPSRPVVITRSPPR-VVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKS 310
                     RSP+RPVVITRSP R ++  SKLSPKRS AS+LRRSFSPSRL+ +  ++ 
Sbjct: 335 ----------RSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQP 394

Query: 311 FSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 395 FSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 419

[Close]

BLAST of Sed0004129 vs. ExPASy TrEMBL
Match: A0A5D3D444 (Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00190 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 2.0e-123
Identity = 266/358 (74.30%), Postives = 293/358 (81.84%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNN--TQNTTMDDPKTPLTRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN   +NT+MDDPKTPLTRQRNR+P
Sbjct: 106 GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKP 165

Query: 71  NLEDSELRAKRKREKQEKKQS-KLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARY 130
           NLEDSELRA+RKREKQEK QS ++  SHSP LQRVRSRINFKVVSPPTKR+VVDKENARY
Sbjct: 166 NLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENARY 225

Query: 131 MANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKS 190
           +ANRVSPRNRPWT K +LFPNPLFLSSDN  QQPKFCRTKSPVI KTR QQTPHKFLIKS
Sbjct: 226 LANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTR-QQTPHKFLIKS 285

Query: 191 PASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRL 250
           P SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                     
Sbjct: 286 PVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVIT--------------------- 345

Query: 251 LASKKPFSPARSPSRPVVITRSPPR-VVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKS 310
                     RSP+RPVVITRSP R ++  SKLSPKRS AS+LRRSFSPSRL+ +  ++ 
Sbjct: 346 ----------RSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRRSFSPSRLVASKLRQP 405

Query: 311 FSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 406 FSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Sed0004129 vs. ExPASy TrEMBL
Match: A6YTD5 (Microtubule binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 8.5e-122
Identity = 264/358 (73.74%), Postives = 291/358 (81.28%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNN--TQNTTMDDPKTPLTRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN   +NT+MDDPKTPLTRQRNR+P
Sbjct: 106 GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKP 165

Query: 71  NLEDSELRAKRKREKQEKKQS-KLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARY 130
           NLEDSELRA+RKREKQEK QS ++  SHSP LQRVRSRINFKVVSPPTKR+VVDKENA Y
Sbjct: 166 NLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENAGY 225

Query: 131 MANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKS 190
           +ANRVSPRNRPWT K +LFPNPLFLSSDN  QQPKFCRTKSPVI KTR QQTPHKFLIKS
Sbjct: 226 LANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTR-QQTPHKFLIKS 285

Query: 191 PASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRL 250
           P SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                     
Sbjct: 286 PVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVIT--------------------- 345

Query: 251 LASKKPFSPARSPSRPVVITRSPPR-VVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKS 310
                     RSP+RPVVITRSP R ++  SKLSPKRS AS+LR SFSPSRL+ +  ++ 
Sbjct: 346 ----------RSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRPSFSPSRLVASKLRQP 405

Query: 311 FSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 406 FSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Sed0004129 vs. ExPASy TrEMBL
Match: A0A1S3BZ63 (microtubule-binding protein TANGLED OS=Cucumis melo OX=3656 GN=LOC103495028 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 8.5e-122
Identity = 264/358 (73.74%), Postives = 291/358 (81.28%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNN--TQNTTMDDPKTPLTRQRNRRP 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVTNN   +NT+MDDPKTPLTRQRNR+P
Sbjct: 106 GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKP 165

Query: 71  NLEDSELRAKRKREKQEKKQS-KLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARY 130
           NLEDSELRA+RKREKQEK QS ++  SHSP LQRVRSRINFKVVSPPTKR+VVDKENA Y
Sbjct: 166 NLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENAGY 225

Query: 131 MANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKS 190
           +ANRVSPRNRPWT K +LFPNPLFLSSDN  QQPKFCRTKSPVI KTR QQTPHKFLIKS
Sbjct: 226 LANRVSPRNRPWTKKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTR-QQTPHKFLIKS 285

Query: 191 PASASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRL 250
           P SASKFQVKI SPPVVI RSPT+PVV TRSP RPV  +                     
Sbjct: 286 PVSASKFQVKI-SPPVVIKRSPTRPVVITRSPTRPVVIT--------------------- 345

Query: 251 LASKKPFSPARSPSRPVVITRSPPR-VVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKS 310
                     RSP+RPVVITRSP R ++  SKLSPKRS AS+LR SFSPSRL+ +  ++ 
Sbjct: 346 ----------RSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRPSFSPSRLVASKLRQP 405

Query: 311 FSPARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           FSPA++TASKLRQSFSPSRLAARL+SPLKSRKSVQK+D  I++SGLKQRP N +QMRI
Sbjct: 406 FSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Sed0004129 vs. ExPASy TrEMBL
Match: A0A6J1G429 (microtubule-binding protein TANGLED OS=Cucurbita moschata OX=3662 GN=LOC111450593 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.9e-113
Identity = 247/355 (69.58%), Postives = 270/355 (76.06%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAVTNNTQNTTMDDPKTPLTRQRNRRPNL 70
           GEW+RMSLPAMLVGETIGEILTASKFAREMVEAVT +T++T+MDDPKTPLTRQRNRRPNL
Sbjct: 103 GEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNL 162

Query: 71  EDSELRAKRKREKQEKKQSKLNESHSPELQRVRSRINFKVVSPPTKRNVVDKENARYMAN 130
           EDSELR +RKREKQEK QSK  ESHSP LQRVRSRINFKVVSPPTKR+VVDKENA+Y+AN
Sbjct: 163 EDSELRVRRKREKQEKLQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENAQYLAN 222

Query: 131 RVSPRN-RPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKTRQQQTPHKFLIKSPA 190
           RVSPRN RPWT K +LFPNP+FLSS +  QQPKFCRTKSPVITKTRQQ TPHKFLIKSPA
Sbjct: 223 RVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPA 282

Query: 191 SASKFQVKIRSPPVVITRSPTKPVVFTRSPPRPVSSSKLSPKRSAASKMYRPFSPLRLLA 250
           SASKFQVKIRSPPVVITRSPTKPV+          SSK SP                   
Sbjct: 283 SASKFQVKIRSPPVVITRSPTKPVL----------SSKQSP------------------- 342

Query: 251 SKKPFSPARSPSRPVVITRSPPRVVGLSKLSPKRSAASQLRRSFSPSRLLVAS-KKSFSP 310
                                          PK S AS+LRRSFSPSRLL +  ++ FSP
Sbjct: 343 -------------------------------PKGSTASKLRRSFSPSRLLTSKLRQPFSP 397

Query: 311 ARMTASKLRQSFSPSRLAARLISPLKSRKSVQKFDDGISMSGLKQRPNNIVQMRI 363
           AR+T SKLRQSFSPSRLAARL+SPLKSRKSVQK+D   ++SGLKQRP NI+QMRI
Sbjct: 403 ARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNTNLSGLKQRPTNIIQMRI 397

[Close]

BLAST of Sed0004129 vs. TAIR 10
Match: AT3G05330.1 (cyclin family )

HSP 1 Score: 199.1 bits (505), Expect = 5.9e-51
Identity = 168/370 (45.41%), Postives = 221/370 (59.73%), Query Frame = 0


Query: 11  GEWQRMSLPAMLVGETIGEILTASKFAREMVEAV----TNNTQNTTM----DDPKTPLTR 70
           G+W++MSLPAML+GET+ EIL AS+  R++V+A+    +  ++  TM    D PKTP T+
Sbjct: 98  GDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKSRKSRRLTMSQEDDGPKTPETQ 157

Query: 71  QRNRRPNLE--DSELRAKRKREKQEKKQSKLNESHS-PELQRVRSRINFKVVSPPTKRNV 130
           Q++R  N E   S ++A+RK+EKQ ++    +ES S P LQR RSRI F+ +SP  K N 
Sbjct: 158 QKSREQNPETVSSNIKARRKKEKQNRR----SESDSPPSLQRARSRIAFRTISPQVKGN- 217

Query: 131 VDKENA-RYMANRVSPRNRPWT-KAVLFPNPLFLSSDNPQQQPKFCRTKSPVITKT---- 190
            + EN+ R++ANRVSP+++PW  KAVLFPNPLF+S     QQ KF RT SPVI +     
Sbjct: 218 -NGENSFRHLANRVSPKHKPWVKKAVLFPNPLFISG-TATQQAKFSRTMSPVIARNEISS 277

Query: 191 --RQQQTPHKFLIKS-PASASKFQVKIRSPPVVITRSPT--------KPVVFTRSPPRPV 250
               ++TP+KFLIKS P SASKFQVKIRSPP V+  SPT        K    +RSP R V
Sbjct: 278 IKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLV-SPTRNGSNSVRKSPRGSRSPTRTV 337

Query: 251 -------------SSSKLSPKRSAASKMYRPFSPLR---LLASKKPFSPARSPSRPVVIT 310
                        ++ K SPK S A+K+ R F+P R    LA K   SP R   +  +  
Sbjct: 338 NLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKRVTLQAFL-- 397

Query: 311 RSPPRVVGLSKLSPKRSAASQLRRSFSPSRLLVASKKSFSPARMTASKLRQSFSPSRLAA 337
            SP R     K SPK         S SP+R+   S+K       TA+K R+SFSPSRLA 
Sbjct: 398 -SPTRNGNFCKKSPK--------ASISPTRVCNKSQK-----LSTAAKFRRSFSPSRLAM 443

The following BLAST results are available for this feature:

BLAST of Sed0004129 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648821.1	1.9e-123	73.89	microtubule-binding protein TANGLED [Cucumis sativus] >KAE8651599.1 hypothetical...	[more]
TYK18310.1	4.2e-123	74.30	microtubule-binding protein TANGLED [Cucumis melo var. makuwa]	[more]
KAA0047966.1	4.2e-123	74.30	microtubule-binding protein TANGLED [Cucumis melo var. makuwa]	[more]
XP_008454676.1	1.8e-121	73.74	PREDICTED: microtubule-binding protein TANGLED [Cucumis melo] >ABR67412.1 microt...	[more]
XP_038877022.1	6.9e-118	72.75	microtubule-binding protein TANGLED [Benincasa hispida]	[more]

BLAST of Sed0004129 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q197W8	4.6e-56	46.39	Microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 ...	[more]
Q84M91	8.4e-50	45.41	Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FUH9	1.7e-26	34.50	Microtubule-binding protein TANGLED1 OS=Zea mays OX=4577 GN=TAN1 PE=2 SV=1	[more]

BLAST of Sed0004129 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U154	2.0e-123	74.30	Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3D444	2.0e-123	74.30	Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A6YTD5	8.5e-122	73.74	Microtubule binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BZ63	8.5e-122	73.74	microtubule-binding protein TANGLED OS=Cucumis melo OX=3656 GN=LOC103495028 PE=4...	[more]
A0A6J1G429	1.9e-113	69.58	microtubule-binding protein TANGLED OS=Cucurbita moschata OX=3662 GN=LOC11145059...	[more]

BLAST of Sed0004129 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05330.1	5.9e-51	45.41	cyclin family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..192
IPR044709	Microtubule-binding protein TANGLED1	PANTHER	PTHR35728	MICROTUBULE-BINDING PROTEIN TANGLED-RELATED	coord: 1..337 coord: 396..450

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004129.2	Sed0004129.2	mRNA
Sed0004129.1	Sed0004129.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000694	regulation of phragmoplast microtubule organization
cellular_component	GO:0015630	microtubule cytoskeleton
molecular_function	GO:0008017	microtubule binding