Sed0004097 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCATTTCTTCAATTCCATGCCCAATTCTGTGCGCTTCCGTTAATTTTGATTGTTTCTGAGCAAAAACTGAACTGGGGTTTCTTAAAAATCTCTTGAACAAGACCCATTTGGAAAGATGATGCACGCCAAATCCGATTCAGATGTGACAAGTTTAGCCCCATCGTCGCCGAGGTCGCCAAAGCGGCCACCAATGTACTACGTGCAGAGCCCTTCAAGAGATTCTCACGACGGCGACAAGTCGTCGACACACGCCACTCCAGCCTTCAACAGCCCCATGGAGAGCCCTTCGCATCCGTCCTACGCCCGCCATTCTCGATCCTCGTCGGCGAGCCGGTTTTCGGGCCCGTTCCGGGCCGCCCTTGGGCGGAAGGGCAGCCGTAAACCCAACGATAAGGGGTGGCCGGAGTGTAAAGTGATTGAAGAAGAAGGGGACTATGATGATGATCTTAATGGGTTGACTAGAAGATGCCAGATTCTCATGGCTATTCTTGCTTTTATTCTCATTTTCTTCCTGTTTTGTGTGATCATTTGGGGTGCTTCCAGGCCTTTCAAAGCTCAGATCAAAGTCAAGGTTTGATTAAAATAATATTTGACTGATTATTTCAGGTTTTCTTTGGCATTTTTGGATCTTTGTTAATTTATTATTTAATCCATGCCTGGAGTAACTGTTCTAATCCCCTTCTGAAGGGGGTGGTACGGTCGTCAAAAGATTGGATTTTGAAGGTGTACTTCCTCAAGATTTAAAATTCACATATGACATTAATTTATACACATCTTCTGTTTGATGTTTCTGACTGCTTAGCCTAAGAATAGGGTGATTACTCGGTATAGTAGAACTATGTTGCTCTCTGATTATTTAGTGCAAGCGAGTGAGAATTTGATGTATTTTGTATGACATTGCTCTATATAAAATCTTTTAAAACTCTAGCCTCTAGGCTGATAGAGCATTTGTATTATTATCTTCCAAATAAAATAATTTTTTTCCTTTGTTTGTAAATGTAGCTAAAGCAAGTTAGTCAACCACTTGAATCCCTCTCTTCTTTGTGTTGCAGAGTTTTTCTTTAATTTCTTTATTCTTGATTGTTTTTCTTTTTTATATTAACTTTATTCTTGATTGTTGTTTTGGCTATTCATAACGGTAACATAAGCTATCTTCTACATTGGATCACTCTTGATATTTGTTCTGATTATCAATGATTTATGTTTCCATGTCCTTTTTTGCTTTGACAGAGCATAACAGTTCATAATGTTTATTTTGGAGAAGGATCTGACACAACAGGAGTTCCCACCAAATTACTCACTACAAACTGTTCATTAAGGATTACTGTGTACAATCCTGCAACCTTCTTTGGTATTCATGTCAGCTCCTCCCCTATCAATCTTATGTACTCCCAGATTCCTGTTGCAACTGGTCAGGTAAGAATTAAGGTCCTGTTCCATAGTCTTTTTTTTTTTCTTTGAAATTTAAGTCTATAACAAGTCTATATCATATGTTTTTTCTACGTGAATATTTACATCTTACCTATATTTGTAAAAATTAAACGAAAATTTGGAAACAAAAAAAAGTAACTTTCAAAAGTTTGTTTTTTATTTTGAAATTTGGTTAGCATTCACGTACTTTCTTAAGGAAAATTAGATACATTGTAGGAGAGATGGAACACATCGTAGAAAATATGAGAAAAAATAAGTTTAAATTTCAAAAATCAAAAACAAAAAACCTATTGGTTATCAATCGGAGCCTCAGATTTCCAATTTCAAATTTTGGAAGAACACTCGAAAGAAAGTCCATCAAGATCTAAGTAAAGGGCAATATGAGTTTGGTACTGAACTGAATGTTGGGGTGTTTTTCTCTTGCTTTTGCAGTTGAAGAAATACTATCAACCGCGGCGGAGTAATCGAATCGAGCTGGTGAATCTTCAAGGGAACAAGGTGCCTTTGTATGGGGCTGGAGCCAGCCTTGAAGCCCTGGATAAAAATGGGAACATTCCTATGATGCTGGTGTTTGAAGTTCATACCAGAGGGAATGTGGTTGGGAAGCTTGTAAGATCGAAGCATCGAAAGCGTATCGCGTGTTCTTTGGATATCGACTCTCACAACTCGAAGCCTATGAAGATTAAAGCTAATTCTTGTACATATGATTGAGAGAAATCTCCATCTTGCATCTTTTCCTTCATTGAAAGGGAAAGATTCTCTACCTGTACGATCATGTTAGACAAAAGTAAGAAGGAAAAAAAAACTATGGTTGTAGAATTAGTTTCTGTTATATATCGGTAGTTTTGCCGGCCACAGCAACTGCGCATGCGCTATGATGGTACAATTATTTGACCTAATGAAATAATATATGTTCTTTATGCTTCTGACAAGACGA CTCCATTTCTTCAATTCCATGCCCAATTCTGTGCGCTTCCGTTAATTTTGATTGTTTCTGAGCAAAAACTGAACTGGGGTTTCTTAAAAATCTCTTGAACAAGACCCATTTGGAAAGATGATGCACGCCAAATCCGATTCAGATGTGACAAGTTTAGCCCCATCGTCGCCGAGGTCGCCAAAGCGGCCACCAATGTACTACGTGCAGAGCCCTTCAAGAGATTCTCACGACGGCGACAAGTCGTCGACACACGCCACTCCAGCCTTCAACAGCCCCATGGAGAGCCCTTCGCATCCGTCCTACGCCCGCCATTCTCGATCCTCGTCGGCGAGCCGGTTTTCGGGCCCGTTCCGGGCCGCCCTTGGGCGGAAGGGCAGCCGTAAACCCAACGATAAGGGGTGGCCGGAGTGTAAAGTGATTGAAGAAGAAGGGGACTATGATGATGATCTTAATGGGTTGACTAGAAGATGCCAGATTCTCATGGCTATTCTTGCTTTTATTCTCATTTTCTTCCTGTTTTGTGTGATCATTTGGGGTGCTTCCAGGCCTTTCAAAGCTCAGATCAAAGTCAAGAGCATAACAGTTCATAATGTTTATTTTGGAGAAGGATCTGACACAACAGGAGTTCCCACCAAATTACTCACTACAAACTGTTCATTAAGGATTACTGTGTACAATCCTGCAACCTTCTTTGGTATTCATGTCAGCTCCTCCCCTATCAATCTTATGTACTCCCAGATTCCTGTTGCAACTGGTCAGTTGAAGAAATACTATCAACCGCGGCGGAGTAATCGAATCGAGCTGGTGAATCTTCAAGGGAACAAGGTGCCTTTGTATGGGGCTGGAGCCAGCCTTGAAGCCCTGGATAAAAATGGGAACATTCCTATGATGCTGGTGTTTGAAGTTCATACCAGAGGGAATGTGGTTGGGAAGCTTGTAAGATCGAAGCATCGAAAGCGTATCGCGTGTTCTTTGGATATCGACTCTCACAACTCGAAGCCTATGAAGATTAAAGCTAATTCTTGTACATATGATTGAGAGAAATCTCCATCTTGCATCTTTTCCTTCATTGAAAGGGAAAGATTCTCTACCTGTACGATCATGTTAGACAAAAGTAAGAAGGAAAAAAAAACTATGGTTGTAGAATTAGTTTCTGTTATATATCGGTAGTTTTGCCGGCCACAGCAACTGCGCATGCGCTATGATGGTACAATTATTTGACCTAATGAAATAATATATGTTCTTTATGCTTCTGACAAGACGA ATGATGCACGCCAAATCCGATTCAGATGTGACAAGTTTAGCCCCATCGTCGCCGAGGTCGCCAAAGCGGCCACCAATGTACTACGTGCAGAGCCCTTCAAGAGATTCTCACGACGGCGACAAGTCGTCGACACACGCCACTCCAGCCTTCAACAGCCCCATGGAGAGCCCTTCGCATCCGTCCTACGCCCGCCATTCTCGATCCTCGTCGGCGAGCCGGTTTTCGGGCCCGTTCCGGGCCGCCCTTGGGCGGAAGGGCAGCCGTAAACCCAACGATAAGGGGTGGCCGGAGTGTAAAGTGATTGAAGAAGAAGGGGACTATGATGATGATCTTAATGGGTTGACTAGAAGATGCCAGATTCTCATGGCTATTCTTGCTTTTATTCTCATTTTCTTCCTGTTTTGTGTGATCATTTGGGGTGCTTCCAGGCCTTTCAAAGCTCAGATCAAAGTCAAGAGCATAACAGTTCATAATGTTTATTTTGGAGAAGGATCTGACACAACAGGAGTTCCCACCAAATTACTCACTACAAACTGTTCATTAAGGATTACTGTGTACAATCCTGCAACCTTCTTTGGTATTCATGTCAGCTCCTCCCCTATCAATCTTATGTACTCCCAGATTCCTGTTGCAACTGGTCAGTTGAAGAAATACTATCAACCGCGGCGGAGTAATCGAATCGAGCTGGTGAATCTTCAAGGGAACAAGGTGCCTTTGTATGGGGCTGGAGCCAGCCTTGAAGCCCTGGATAAAAATGGGAACATTCCTATGATGCTGGTGTTTGAAGTTCATACCAGAGGGAATGTGGTTGGGAAGCTTGTAAGATCGAAGCATCGAAAGCGTATCGCGTGTTCTTTGGATATCGACTCTCACAACTCGAAGCCTATGAAGATTAAAGCTAATTCTTGTACATATGATTGA MMHAKSDSDVTSLAPSSPRSPKRPPMYYVQSPSRDSHDGDKSSTHATPAFNSPMESPSHPSYARHSRSSSASRFSGPFRAALGRKGSRKPNDKGWPECKVIEEEGDYDDDLNGLTRRCQILMAILAFILIFFLFCVIIWGASRPFKAQIKVKSITVHNVYFGEGSDTTGVPTKLLTTNCSLRITVYNPATFFGIHVSSSPINLMYSQIPVATGQLKKYYQPRRSNRIELVNLQGNKVPLYGAGASLEALDKNGNIPMMLVFEVHTRGNVVGKLVRSKHRKRIACSLDIDSHNSKPMKIKANSCTYD Homology
BLAST of Sed0004097 vs. NCBI nr
Match: XP_023516527.1 (uncharacterized protein LOC111780378 [Cucurbita pepo subsp. pepo] >KAG7023588.1 hypothetical protein SDJN02_14614 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 552.7 bits (1423), Expect = 1.9e-153 Identity = 276/308 (89.61%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Sed0004097 vs. NCBI nr
Match: XP_022987796.1 (uncharacterized protein LOC111485235 [Cucurbita maxima] >XP_022987797.1 uncharacterized protein LOC111485235 [Cucurbita maxima]) HSP 1 Score: 551.6 bits (1420), Expect = 4.3e-153 Identity = 275/308 (89.29%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Sed0004097 vs. NCBI nr
Match: XP_022961169.1 (uncharacterized protein LOC111461759 [Cucurbita moschata]) HSP 1 Score: 551.6 bits (1420), Expect = 4.3e-153 Identity = 275/308 (89.29%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Sed0004097 vs. NCBI nr
Match: KAG6589919.1 (hypothetical protein SDJN03_15342, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 550.8 bits (1418), Expect = 7.3e-153 Identity = 275/308 (89.29%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Sed0004097 vs. NCBI nr
Match: XP_008463399.1 (PREDICTED: uncharacterized protein LOC103501566 [Cucumis melo] >TYK28709.1 uncharacterized protein E5676_scaffold403G00230 [Cucumis melo var. makuwa]) HSP 1 Score: 547.7 bits (1410), Expect = 6.2e-152 Identity = 278/309 (89.97%), Postives = 295/309 (95.47%), Query Frame = 0
BLAST of Sed0004097 vs. ExPASy TrEMBL
Match: A0A6J1JFC5 (uncharacterized protein LOC111485235 OS=Cucurbita maxima OX=3661 GN=LOC111485235 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 2.1e-153 Identity = 275/308 (89.29%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Sed0004097 vs. ExPASy TrEMBL
Match: A0A6J1HD92 (uncharacterized protein LOC111461759 OS=Cucurbita moschata OX=3662 GN=LOC111461759 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 2.1e-153 Identity = 275/308 (89.29%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Sed0004097 vs. ExPASy TrEMBL
Match: A0A5D3DZ77 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00230 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152 Identity = 278/309 (89.97%), Postives = 295/309 (95.47%), Query Frame = 0
BLAST of Sed0004097 vs. ExPASy TrEMBL
Match: A0A1S3CJ71 (uncharacterized protein LOC103501566 OS=Cucumis melo OX=3656 GN=LOC103501566 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152 Identity = 278/309 (89.97%), Postives = 295/309 (95.47%), Query Frame = 0
BLAST of Sed0004097 vs. ExPASy TrEMBL
Match: A0A6J1CSV1 (uncharacterized protein LOC111014444 OS=Momordica charantia OX=3673 GN=LOC111014444 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150 Identity = 274/308 (88.96%), Postives = 291/308 (94.48%), Query Frame = 0
BLAST of Sed0004097 vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 244.2 bits (622), Expect = 1.4e-64 Identity = 153/344 (44.48%), Postives = 205/344 (59.59%), Query Frame = 0
BLAST of Sed0004097 vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 219.9 bits (559), Expect = 2.8e-57 Identity = 139/331 (41.99%), Postives = 194/331 (58.61%), Query Frame = 0
BLAST of Sed0004097 vs. TAIR 10
Match: AT3G24600.1 (Late embryogenesis abundant protein, group 2 ) HSP 1 Score: 215.3 bits (547), Expect = 6.8e-56 Identity = 109/253 (43.08%), Postives = 162/253 (64.03%), Query Frame = 0
BLAST of Sed0004097 vs. TAIR 10
Match: AT1G45688.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 189.1 bits (479), Expect = 5.2e-48 Identity = 119/243 (48.97%), Postives = 154/243 (63.37%), Query Frame = 0
BLAST of Sed0004097 vs. TAIR 10
Match: AT2G41990.1 (CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 153.7 bits (387), Expect = 2.4e-37 Identity = 113/306 (36.93%), Postives = 176/306 (57.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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