Sed0004065 (gene) Chayote v1

Overview
NameSed0004065
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG05: 29132299 .. 29132553 (-)
RNA-Seq ExpressionSed0004065
SyntenySed0004065
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAATCAGAGGGGCAGAAAAGCAAAAAAGGGTTGTCTCTTTGGGGGCGTTTGAAATTAAAGCTTTTTTGGAAGAAAAAAGAGGGCAATAAACTGCGTATTAGAGAGATAAAGAAATCCAATAATGAATTTGTATACGACGATGTAAGCTACGCTAAGAACTTCGATGAAGGATTGAATGATGGAGATGAAGATTGGTACAATCGAAGCTTTTCTGCAAGATATGCTTCTTCTTCCGATAATAAGGAATAG

mRNA sequence

ATGGAGAAATCAGAGGGGCAGAAAAGCAAAAAAGGGTTGTCTCTTTGGGGGCGTTTGAAATTAAAGCTTTTTTGGAAGAAAAAAGAGGGCAATAAACTGCGTATTAGAGAGATAAAGAAATCCAATAATGAATTTGTATACGACGATGTAAGCTACGCTAAGAACTTCGATGAAGGATTGAATGATGGAGATGAAGATTGGTACAATCGAAGCTTTTCTGCAAGATATGCTTCTTCTTCCGATAATAAGGAATAG

Coding sequence (CDS)

ATGGAGAAATCAGAGGGGCAGAAAAGCAAAAAAGGGTTGTCTCTTTGGGGGCGTTTGAAATTAAAGCTTTTTTGGAAGAAAAAAGAGGGCAATAAACTGCGTATTAGAGAGATAAAGAAATCCAATAATGAATTTGTATACGACGATGTAAGCTACGCTAAGAACTTCGATGAAGGATTGAATGATGGAGATGAAGATTGGTACAATCGAAGCTTTTCTGCAAGATATGCTTCTTCTTCCGATAATAAGGAATAG

Protein sequence

MEKSEGQKSKKGLSLWGRLKLKLFWKKKEGNKLRIREIKKSNNEFVYDDVSYAKNFDEGLNDGDEDWYNRSFSARYASSSDNKE
Homology
BLAST of Sed0004065 vs. NCBI nr
Match: KAG6608120.1 (hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.3 bits (199), Expect = 4.5e-12
Identity = 49/81 (60.49%), Postives = 57/81 (70.37%), Query Frame = 0

Query: 1  MEKSEGQKSKKGL-SLWGRLKLKLFWKKKEGNKLRIREIKKSNNEFVYDDVSYAKNFDEG 60
          MEKSEGQKS + L S WGRLKLKL   K+EGN   I + K  N  F YD +SYA+NFDEG
Sbjct: 1  MEKSEGQKSSEELVSCWGRLKLKLLLMKREGNNPCIGDTKPLNGGFRYDALSYAQNFDEG 60

Query: 61 LNDGDEDWYNRSFSARYASSS 81
          L+D DE+   R FSARY S+S
Sbjct: 61 LDDEDEELRCRGFSARYVSAS 81

BLAST of Sed0004065 vs. NCBI nr
Match: KAG2698660.1 (hypothetical protein I3760_07G160100 [Carya illinoinensis] >KAG6705100.1 hypothetical protein I3842_07G165100 [Carya illinoinensis])

HSP 1 Score: 65.5 bits (158), Expect = 2.6e-07
Identity = 37/70 (52.86%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 13 LSLWGRLKLKLFW--KKKEGNKLRIREIKKSNNEFVYDDVSYAKNFDEGLNDGDEDWYNR 72
          LS WGRLKLKL W  ++      R R + K    F YD +SYA+NFDEG +D DE+ Y R
Sbjct: 7  LSCWGRLKLKLPWTQQRVRSPNTRSRVVGKLGGRFKYDPLSYAQNFDEGWDDDDEEVYQR 66

Query: 73 SFSARYASSS 81
           FSARYA+ S
Sbjct: 67 GFSARYAAPS 76

BLAST of Sed0004065 vs. NCBI nr
Match: KAG7971929.1 (hypothetical protein I3843_07G159600 [Carya illinoinensis])

HSP 1 Score: 63.9 bits (154), Expect = 7.4e-07
Identity = 36/70 (51.43%), Postives = 44/70 (62.86%), Query Frame = 0

Query: 13 LSLWGRLKLKLFW--KKKEGNKLRIREIKKSNNEFVYDDVSYAKNFDEGLNDGDEDWYNR 72
          LS WGR KLKL W  ++      R R + K    F YD +SYA+NFDEG +D DE+ Y R
Sbjct: 7  LSCWGRFKLKLPWTQQRVRSPNTRSRVVGKLGGRFKYDPLSYAQNFDEGWDDDDEEVYQR 66

Query: 73 SFSARYASSS 81
           FSARYA+ S
Sbjct: 67 GFSARYAAPS 76

BLAST of Sed0004065 vs. NCBI nr
Match: KAF3976246.1 (hypothetical protein CMV_000564 [Castanea mollissima])

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-06
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0

Query: 1  MEKSEGQKSKKG-LSLWGRLKLKLFWKKKEGNK---LRIREIKKSNNEFVYDDVSYAKNF 60
          ME++   +   G LS WG LKLKL W ++   K   +R+R + K    F YD +SYA+NF
Sbjct: 1  MERTSSPRINAGLLSCWGCLKLKLPWAQRRARKSTHMRMRSVDKLGGGFNYDPLSYAQNF 60

Query: 61 DEGLNDGDEDWYNRSFSARYASSS 81
          DEG ++ DE++  R FSAR+A+ S
Sbjct: 61 DEGWDEDDEEFAQRGFSARFAAPS 84

BLAST of Sed0004065 vs. NCBI nr
Match: RZC15786.1 (hypothetical protein D0Y65_009209 [Glycine soja])

HSP 1 Score: 60.8 bits (146), Expect = 6.3e-06
Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 1  MEKSE--GQKSKKG-LSLWGRLKLKLFWKKKEGNKLRIREIKKSNNEFVYDDVSYAKNFD 60
          MEKS   G K+  G LS WGRLKLKL W K+           KS   F YD +SYA+NFD
Sbjct: 13 MEKSSSPGSKTNGGWLSCWGRLKLKLPWAKRTST-------YKSIGGFKYDPLSYAQNFD 72

Query: 61 EGLNDGDEDWYNRSFSARYASSSDNK 84
          EG  + DE+  +R FSARYA+ S +K
Sbjct: 73 EGWVEDDEESLHRGFSARYAAPSSHK 91

BLAST of Sed0004065 vs. ExPASy TrEMBL
Match: K7KJ14 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_04G090800 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06
Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 1  MEKSE--GQKSKKG-LSLWGRLKLKLFWKKKEGNKLRIREIKKSNNEFVYDDVSYAKNFD 60
          MEKS   G K+  G LS WGRLKLKL W K+           KS   F YD +SYA+NFD
Sbjct: 1  MEKSSSPGSKTNGGWLSCWGRLKLKLPWAKRTST-------YKSIGGFKYDPLSYAQNFD 60

Query: 61 EGLNDGDEDWYNRSFSARYASSSDNK 84
          EG  + DE+  +R FSARYA+ S +K
Sbjct: 61 EGWVEDDEESLHRGFSARYAAPSSHK 79

BLAST of Sed0004065 vs. ExPASy TrEMBL
Match: A0A445KYI8 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009209 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06
Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 1  MEKSE--GQKSKKG-LSLWGRLKLKLFWKKKEGNKLRIREIKKSNNEFVYDDVSYAKNFD 60
          MEKS   G K+  G LS WGRLKLKL W K+           KS   F YD +SYA+NFD
Sbjct: 13 MEKSSSPGSKTNGGWLSCWGRLKLKLPWAKRTST-------YKSIGGFKYDPLSYAQNFD 72

Query: 61 EGLNDGDEDWYNRSFSARYASSSDNK 84
          EG  + DE+  +R FSARYA+ S +K
Sbjct: 73 EGWVEDDEESLHRGFSARYAAPSSHK 91

BLAST of Sed0004065 vs. ExPASy TrEMBL
Match: A0A2N9FZI5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20116 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 0

Query: 1  MEKSEGQKS--KKG-LSLWGRLKLKLFWKKKEGNKLRIR-EIKKSNNEFVYDDVSYAKNF 60
          M+++   +S  KKG LS WG  KLKL W ++ G     R  + K    F YD +SYA+NF
Sbjct: 1  MDRTSSPRSTDKKGFLSCWGCFKLKLPWAQRRGKSTNTRMRVSKLGGGFNYDPLSYAQNF 60

Query: 61 DEGLNDGDEDWYNRSFSARYASSS 81
          DEG +D DE+  +R FSARYA+ S
Sbjct: 61 DEGWDDDDEESSHRGFSARYAAPS 84

BLAST of Sed0004065 vs. ExPASy TrEMBL
Match: A0A0B2RTQ8 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_001296 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.2e-06
Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 0

Query: 1  MEKSEGQKSKKG---LSLWGRLKLKLFWKKKEGNKLRIREIKKSNNEFVYDDVSYAKNFD 60
          MEKS   +SK     LS WGRLKLKL W K+  +        K    F YD +SYA+NFD
Sbjct: 1  MEKSSSLRSKTNGGRLSCWGRLKLKLPWAKRTSS-------YKPIGGFNYDPLSYAQNFD 60

Query: 61 EGLNDGDEDWYNRSFSARYASSSDNK 84
          EG  + DE+  +R FSARYA+ S +K
Sbjct: 61 EGWVEDDEESLHRGFSARYAAPSSHK 79

BLAST of Sed0004065 vs. ExPASy TrEMBL
Match: K7K3E9 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G122400 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.2e-06
Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 0

Query: 1  MEKSEGQKSKKG---LSLWGRLKLKLFWKKKEGNKLRIREIKKSNNEFVYDDVSYAKNFD 60
          MEKS   +SK     LS WGRLKLKL W K+  +        K    F YD +SYA+NFD
Sbjct: 1  MEKSSSLRSKTNGGRLSCWGRLKLKLPWAKRTSS-------YKPIGGFNYDPLSYAQNFD 60

Query: 61 EGLNDGDEDWYNRSFSARYASSSDNK 84
          EG  + DE+  +R FSARYA+ S +K
Sbjct: 61 EGWVEDDEESLHRGFSARYAAPSSHK 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6608120.14.5e-1260.49hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG2698660.12.6e-0752.86hypothetical protein I3760_07G160100 [Carya illinoinensis] >KAG6705100.1 hypothe... [more]
KAG7971929.17.4e-0751.43hypothetical protein I3843_07G159600 [Carya illinoinensis][more]
KAF3976246.12.2e-0644.05hypothetical protein CMV_000564 [Castanea mollissima][more]
RZC15786.16.3e-0650.00hypothetical protein D0Y65_009209 [Glycine soja][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
K7KJ143.0e-0650.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_04G090800 PE=4 SV=1[more]
A0A445KYI83.0e-0650.00Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009209 PE=4 SV=1[more]
A0A2N9FZI53.0e-0646.43Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20116 PE=4 SV=1[more]
A0A0B2RTQ85.2e-0647.67Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_001296 PE=4 SV=1[more]
K7K3E95.2e-0647.67Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G122400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 9..81
NoneNo IPR availablePANTHERPTHR33168:SF39SUBFAMILY NOT NAMEDcoord: 9..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0004065.1Sed0004065.1mRNA