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Sed0004038 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGCACAACTATGAAATAGATTAACAAGATAGCCAACTATGTCATTTACCTCACTAAAAATTAAAAAAAAAAAAAGAAAAAAGAAAAAAGAAAATGATACATATGGTTATATGGTTGAGTCTAAAAAAATAATATGGTTATATGGTTGCGTACATTAGCCACAATTGGCCAAATCAAGAGTCCTATATAAACCCCCTCTCCATCAGCCCACAAATGAGCACGCTCGGAAGAGAGAGATCGGTAGAGACTAGAGCAGAGAGATTTTCGACCACAGTTACGCGAATTGGAAACTAGGGTTTGGCGCGCTGTTGATCATCGGCGTCGGCATCAATGGCGACGGAGGAGAAATCACCTACGCCGCCACCGCAGGAGCTGCAGCAGAGCAATGATGCGAGGCCAGCCCTGAGGAAGCCAGTCTTCGTTAAGGTGGAGCAGCTCAAGCCTGGCACTAATGGCCACACACTCGTCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGCCGATCGGTGTCTCACCACCTTCGACAGACGCGGATCGCTGAGTGCCTTGTTGGGGACGAAACTGGAACCATTATGTTAACTGCGCGTAATGATCAGGGTATGGATTTCTGGATTTTGGGGAAAATTGGGGAGAATGATTGGTTTTATTTGTTCTTTTATGTGAATTGAATTTGGAGATAGGAAATTAGGTTTTGTGTTAAGAAAACAGAACAACAATCACAAAGCAAAACAAAACAATAAACTTACATGGGTAGAGGAAAGAAGGGTGGAATGCCAATGCGGCTAGGGTTTTAAGAGAGTTCAAATAGTGCTCTCTCCTAAAATATATTACAAAATAGGCCTAAATGCACAAGATCCGCCTTGCCGACGAGACCCCGACTAAGTAATCATAGGCATCAAACAGTTGAGGCATGTCCACTGGGGGGCTAACTCAACTCAGTGATTATGTAGGTTGGGATGTTAGAATTATGTACTCCATAGCGATTGGATTTTGATATTTTCATAAATCTAAGTTTTAAACAATGAAATATAATATGAATTGTGAAACAGGTTTTGGGGGATTACCTAGTTCTTGTCGATTTGCTTAAAGAAACTTGAAAGTGAGAATAATAGGCCATAGGAGGGGGTCTGTGTTTTATGGATTGCATAATGTCTTGCGCTAGGTTTTGTGTTGGGTTAAGAATGGCTATGAAGAACCAAATCCCTATGGTTGCCTGCTCTTTATTTATTATTTATTTATGCAACTTGTTTCATATTGATGAGTTAATCTTTATATTAATTGTATGCTTACTGAAGATTTTATTTTAAATTTAAAGCTTGATGTTACTTCATGGCAAATCCATAGCCCTATCTACTTCTACTTGGTCTGTAAACTATCGCCACTCGAGTCTCTAGTCTTGTAATGAGATTTATGTAAATAAGGATAATTATGTGCATTGAACCGAATGGTAATGGTTACCATAATAACTTTCAAACTGTTTTGCATTTCTAAATGTTTGAATGTGTTGTGTTGTGTTGTTTTGTTTCCTCAGTTGATCAAGTAAAACCTGAGACCACTGTCATTCTACGTAATGCTAAGATTGACATGTTCAAAGGGTCTATGAGGTTAGCAGTTGATAAATGGGGCCGCATTGAGCTCACCGAGCCTGCAAATTTCATCGTCAAGGAAGACAATAATCTTTCTTTAGTCGAGTATGAACTCGTGAATGTTGCAGATGAGTGATAGGTCGTACTAAAGGCCAACTTATGCATACAATGGGTTGAGATGGCTGGTCATCGAGTTTCCTGGTTATCTGCTGATGTGAATATATAACAGCACTATGTTATAACTTTGTGTGTGTGAAGTATTTATATGAACAATCCCTTGATTTCATCTGAACTTCAAAACATGAAAGCTCTGCTTCATCGGTATGACTTACATGAGCCGTGTTTGGTTTGGTAAAGGTATAAATATTTATTAGTTGGGTTCTTAAAACTCTGGAAATGTAATCTAGTATTAATGACGACTAAGAATGCTTTCGTTATGGCCCTGATAACGTATATAAAATGCAGAGTTTCAATTTACTGGGCGTGTATACTGTATATTTTCTTGCAATTCATATTATGTGCATGTTCTAGATAGGAACTTATCTTGTAGGTGGTTTAACATCAAGGCAACAGCAAAAGTCTTTGGAC GGGCACAACTATGAAATAGATTAACAAGATAGCCAACTATGTCATTTACCTCACTAAAAATTAAAAAAAAAAAAAGAAAAAAGAAAAAAGAAAATGATACATATGGTTATATGGTTGAGTCTAAAAAAATAATATGGTTATATGGTTGCGTACATTAGCCACAATTGGCCAAATCAAGAGTCCTATATAAACCCCCTCTCCATCAGCCCACAAATGAGCACGCTCGGAAGAGAGAGATCGGTAGAGACTAGAGCAGAGAGATTTTCGACCACAGTTACGCGAATTGGAAACTAGGGTTTGGCGCGCTGTTGATCATCGGCGTCGGCATCAATGGCGACGGAGGAGAAATCACCTACGCCGCCACCGCAGGAGCTGCAGCAGAGCAATGATGCGAGGCCAGCCCTGAGGAAGCCAGTCTTCGTTAAGGTGGAGCAGCTCAAGCCTGGCACTAATGGCCACACACTCGTCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGCCGATCGGTGTCTCACCACCTTCGACAGACGCGGATCGCTGAGTGCCTTGTTGGGGACGAAACTGGAACCATTATGTTAACTGCGCGTAATGATCAGGTTGATCAAGTAAAACCTGAGACCACTGTCATTCTACGTAATGCTAAGATTGACATGTTCAAAGGGTCTATGAGGTTAGCAGTTGATAAATGGGGCCGCATTGAGCTCACCGAGCCTGCAAATTTCATCGTCAAGGAAGACAATAATCTTTCTTTAGTCGAGTATGAACTCGTGAATGTTGCAGATGAGTGATAGGTCGTACTAAAGGCCAACTTATGCATACAATGGGTTGAGATGGCTGGTCATCGAGTTTCCTGGTTATCTGCTGATGTGAATATATAACAGCACTATGTTATAACTTTGTGTGTGTGAAGTATTTATATGAACAATCCCTTGATTTCATCTGAACTTCAAAACATGAAAGCTCTGCTTCATCGGTATGACTTACATGAGCCGTGTTTGGTTTGGTAAAGGTATAAATATTTATTAGTTGGGTTCTTAAAACTCTGGAAATGTAATCTAGTATTAATGACGACTAAGAATGCTTTCGTTATGGCCCTGATAACGTATATAAAATGCAGAGTTTCAATTTACTGGGCGTGTATACTGTATATTTTCTTGCAATTCATATTATGTGCATGTTCTAGATAGGAACTTATCTTGTAGGTGGTTTAACATCAAGGCAACAGCAAAAGTCTTTGGAC ATGGCGACGGAGGAGAAATCACCTACGCCGCCACCGCAGGAGCTGCAGCAGAGCAATGATGCGAGGCCAGCCCTGAGGAAGCCAGTCTTCGTTAAGGTGGAGCAGCTCAAGCCTGGCACTAATGGCCACACACTCGTCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGCCGATCGGTGTCTCACCACCTTCGACAGACGCGGATCGCTGAGTGCCTTGTTGGGGACGAAACTGGAACCATTATGTTAACTGCGCGTAATGATCAGGTTGATCAAGTAAAACCTGAGACCACTGTCATTCTACGTAATGCTAAGATTGACATGTTCAAAGGGTCTATGAGGTTAGCAGTTGATAAATGGGGCCGCATTGAGCTCACCGAGCCTGCAAATTTCATCGTCAAGGAAGACAATAATCTTTCTTTAGTCGAGTATGAACTCGTGAATGTTGCAGATGAGTGA MATEEKSPTPPPQELQQSNDARPALRKPVFVKVEQLKPGTNGHTLVVKVVSSNTVLQKGRSVSHHLRQTRIAECLVGDETGTIMLTARNDQVDQVKPETTVILRNAKIDMFKGSMRLAVDKWGRIELTEPANFIVKEDNNLSLVEYELVNVADE Homology
BLAST of Sed0004038 vs. NCBI nr
Match: XP_022139613.1 (uncharacterized protein At4g28440-like [Momordica charantia]) HSP 1 Score: 261.9 bits (668), Expect = 3.4e-66 Identity = 134/150 (89.33%), Postives = 142/150 (94.67%), Query Frame = 0
BLAST of Sed0004038 vs. NCBI nr
Match: XP_038899654.1 (uncharacterized protein At4g28440-like [Benincasa hispida]) HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65 Identity = 133/150 (88.67%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of Sed0004038 vs. NCBI nr
Match: XP_004146043.1 (uncharacterized protein At4g28440 [Cucumis sativus] >KGN55099.1 hypothetical protein Csa_012716 [Cucumis sativus]) HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64 Identity = 131/150 (87.33%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of Sed0004038 vs. NCBI nr
Match: XP_008463705.1 (PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo] >KAA0066804.1 Nucleic acid-binding [Cucumis melo var. makuwa] >TYK27951.1 Nucleic acid-binding [Cucumis melo var. makuwa]) HSP 1 Score: 256.1 bits (653), Expect = 1.9e-64 Identity = 130/150 (86.67%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of Sed0004038 vs. NCBI nr
Match: KAG6591934.1 (hypothetical protein SDJN03_14280, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024807.1 hypothetical protein SDJN02_13626 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61 Identity = 129/154 (83.77%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Sed0004038 vs. ExPASy Swiss-Prot
Match: O49453 (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 4.2e-43 Identity = 90/135 (66.67%), Postives = 105/135 (77.78%), Query Frame = 0
BLAST of Sed0004038 vs. ExPASy TrEMBL
Match: A0A6J1CG19 (uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC111010472 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66 Identity = 134/150 (89.33%), Postives = 142/150 (94.67%), Query Frame = 0
BLAST of Sed0004038 vs. ExPASy TrEMBL
Match: A0A0A0L242 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629450 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 5.3e-65 Identity = 131/150 (87.33%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of Sed0004038 vs. ExPASy TrEMBL
Match: A0A5D3DWE0 (Nucleic acid-binding OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001550 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 9.1e-65 Identity = 130/150 (86.67%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of Sed0004038 vs. ExPASy TrEMBL
Match: A0A1S3CKC4 (uncharacterized protein At4g28440-like OS=Cucumis melo OX=3656 GN=LOC103501787 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 9.1e-65 Identity = 130/150 (86.67%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of Sed0004038 vs. ExPASy TrEMBL
Match: A0A6J1FBC1 (uncharacterized protein At4g28440-like OS=Cucurbita moschata OX=3662 GN=LOC111442557 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.6e-61 Identity = 127/154 (82.47%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Sed0004038 vs. TAIR 10
Match: AT2G33845.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 191.8 bits (486), Expect = 4.0e-49 Identity = 103/155 (66.45%), Postives = 118/155 (76.13%), Query Frame = 0
BLAST of Sed0004038 vs. TAIR 10
Match: AT1G23750.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 184.5 bits (467), Expect = 6.4e-47 Identity = 88/136 (64.71%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of Sed0004038 vs. TAIR 10
Match: AT4G28440.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 175.6 bits (444), Expect = 3.0e-44 Identity = 90/135 (66.67%), Postives = 105/135 (77.78%), Query Frame = 0
BLAST of Sed0004038 vs. TAIR 10
Match: AT1G10590.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 171.8 bits (434), Expect = 4.3e-43 Identity = 88/135 (65.19%), Postives = 108/135 (80.00%), Query Frame = 0
BLAST of Sed0004038 vs. TAIR 10
Match: AT1G10590.3 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 171.8 bits (434), Expect = 4.3e-43 Identity = 88/135 (65.19%), Postives = 108/135 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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