
Sed0004007 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGAAATGCCAAACCCAATATTTTTTTTCATTTTGGTCCTCAATTCTTTTGGCTTTCCCCGAATATAAATTCTCCGGCGAGTGGCCGACATGAGGAGGAGCTCCTCCTCTTTACTTCTAATCATGGTCCTCATCGCCGCCACCCGGTTCGTTCTTCTCGTCGACTCCAGACCGCTCCGATCCGGTTCGACAGACGACCACCGTGTTAATAATGACTCGGCTCTTCCCGATAAGCCGGAAAGAGCCGGGTCGGAGACGAGAGATTCCGGTGGCGTAGTGTTTACGTTGGCTTCCGGACCGAGCAAAAGGGGTGCTGGCCATTAAAACCAAACATGAAGCATATTCTTTGCCCATTTCATATATTTGCCAAAATCTTTTTGGATTTATTTTCTTTTGGGTTATGTACACAATTTTTCTTATTGTAGAGATTTTACCCTTTTTGTTTTAGTCCTATACAAAATTGTGGAAATCGAACTACAGATCTCGTGATTATGCCGTGGCAAAAACTTTTGCTGCTCTAGTTCAAATACTTGGATTGTGTATTTTAGTTTCTAATTTTAAATAGTTTGTCATTTCTAAGACTTATATTACGTGATGATCAAGTTGGG ATAGAAATGCCAAACCCAATATTTTTTTTCATTTTGGTCCTCAATTCTTTTGGCTTTCCCCGAATATAAATTCTCCGGCGAGTGGCCGACATGAGGAGGAGCTCCTCCTCTTTACTTCTAATCATGGTCCTCATCGCCGCCACCCGGTTCGTTCTTCTCGTCGACTCCAGACCGCTCCGATCCGGTTCGACAGACGACCACCGTGTTAATAATGACTCGGCTCTTCCCGATAAGCCGGAAAGAGCCGGGTCGGAGACGAGAGATTCCGGTGGCGTAGTGTTTACGTTGGCTTCCGGACCGAGCAAAAGGGGTGCTGGCCATTAAAACCAAACATGAAGCATATTCTTTGCCCATTTCATATATTTGCCAAAATCTTTTTGGATTTATTTTCTTTTGGGTTATGTACACAATTTTTCTTATTGTAGAGATTTTACCCTTTTTGTTTTAGTCCTATACAAAATTGTGGAAATCGAACTACAGATCTCGTGATTATGCCGTGGCAAAAACTTTTGCTGCTCTAGTTCAAATACTTGGATTGTGTATTTTAGTTTCTAATTTTAAATAGTTTGTCATTTCTAAGACTTATATTACGTGATGATCAAGTTGGG ATGAGGAGGAGCTCCTCCTCTTTACTTCTAATCATGGTCCTCATCGCCGCCACCCGGTTCGTTCTTCTCGTCGACTCCAGACCGCTCCGATCCGGTTCGACAGACGACCACCGTGTTAATAATGACTCGGCTCTTCCCGATAAGCCGGAAAGAGCCGGGTCGGAGACGAGAGATTCCGGTGGCGTAGTGTTTACGTTGGCTTCCGGACCGAGCAAAAGGGGTGCTGGCCATTAA MRRSSSSLLLIMVLIAATRFVLLVDSRPLRSGSTDDHRVNNDSALPDKPERAGSETRDSGGVVFTLASGPSKRGAGH Homology
BLAST of Sed0004007 vs. NCBI nr
Match: KAG6595007.1 (hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.0 bits (214), Expect = 7.5e-14 Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Sed0004007 vs. NCBI nr
Match: KAG6604156.1 (hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of Sed0004007 vs. NCBI nr
Match: TYK12856.1 (hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 6.2e-08 Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Sed0004007 vs. NCBI nr
Match: KAE8647506.1 (hypothetical protein Csa_003725 [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 2.6e-06 Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Sed0004007 vs. ExPASy TrEMBL
Match: A0A5D3CR30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004480 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-08 Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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