Sed0003960 (gene) Chayote v1

Overview


Name	Sed0003960
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein PHR1-LIKE 2-like
Location	LG02: 50894519 .. 50898822 (+)
RNA-Seq Expression	Sed0003960
Synteny	Sed0003960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATTTTTGTTTTCTCTTTGGTCCTTACATTTTCGTTTTATTCTAAATTTCTCTACTCGCCGGAGCAAAATGCTCTCTGGGTTTTCTCAGGAACCGGCCGGAATGTACTCGGCCATTCCGGCGATGCCGATCGACGGCGGCGTCCACGGCAAGTTTCAGAGTTCTCTCGACGGAACGAATCTTCCAGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGTTGGACGGCGGAGCTCCACGAGCGATTCGTCGACGCCGTCACTCAGCTCGGCGGTCCTGACAGTGAGTTTTTTTTTTTTTTATAAATTTTAAATATTGATTTTCTATTGTTCTGTTTTGTGCTAATTTGGGCTCTCTATTTGTGTAATGTTGAATGTGGTGTTGGAATTTTTAAAATTTTCTTTTTCCCCTGCAATGTGCTAATTATGAGTCATGGAGGTTTGTGGCTTTGTTCTTCCTTTTCTGCAATAATTATAGTGTTTGTGGATTTTTGAAGCAATTTTTCTCCATTTTTCTTGGTTTATTGGAGATTGACTGTGATGTGAGCTTTTCTTTTCAAGAATTTTATGGCTTAGTATATGAGAAGTTTGGATGTGTAATTCTCTCCATCATCGTGAGTTGACCCTTGTGGTAAACAACTTCTTGAAAAACCAATAAATGATAGAATTCTATTATACTACCTAGAAATGTTATATGGTCAGACAACAAAGTTGTTCCGCTCGAATAATTGAGATGTGCTTAAATTAGTCTCGAACACACATAGATATCAAACTAAAATTAAGTTGTCTATCATGGAATAGCCTAATGGTCAAGAGGGTATTAGAGAACCAAGATATGATGTGTTCAATTTATGGTGGCCACCTTGCTAAGAATTAATTTCTTACTAGTTTTCTTGACATCCTAAAGTTGTAGGGTCATGCGGTATGTCATGTGAAATTAGTCGAGGTGCGCACAAGCTGGTTCAGATAATCACATAAAAAAAAAAATTGTGTACCACTCTCTCTCTCTTCAATTAGTTCTCACGTTTGGTGGTTTCTTGGATAATAAAGCTTAGCCATTGAGTAGAGAAGAATAGCAAGGGAGATTTTAATAGTTGTGTCACTTGAAATTAGCTCCAATTTGAAGGATGGCGTTGTTACAATTACCCTCTTTAGAGACAAGGGTGGAGTCTTTTGGAAAAAAGAAGAAGAATATTTCTAGCTATATCTAGTGGAACAATTACATGGTTGGATTGGGTTGGGTTAGGCGTATTTTTTTGGACCGAACCTTCAGTTCTAGGTTGGTCAATCTTCCAACTCTATGTTCCCAAGAGATGGCACAGTGGTTGAAGACTTGGACTTTGAGGGTATGCTCCCCTCAAAGTCTTGGGTTTGAGACTCACCTGTGACATTACTCCTTCAATGTCTCTGGTGCTTGGCCTAAGGACGGTCGTGGTTACCCTTATTTAAAAAAAAAAAAAAAATCTTCCAACCCTATGTATTAGAGCAACCCAACCCATATACTTTCTGTTAGATTTAATAGTTTGGGTTGTTGGATTATTTTGGGCTAAAGACACTACATATATGTTAGCAAGAGCTCTCCTATATTGACTCGTGTGTAGGCAATTACTGTCCTTTTTAGAGGGTGGACTACCCTCTCTGAGGGAGATGTGGTCAACGGTGCAGTCCGGTGTTTATAATAAATGAACTTCTGATTCCTATTAAAAAGAGTGTTCAATTCTCGTGAGAATTCTTCAGAGGAATCATAAGGATTTTTGTTTATGAAATCTTTATATGAAAATGAAGCGATCCTTTAACTTCAACAATATCTAGCTTTACAAATTGTCTCTTTGACTTCTAAGTACATGTTTGGAAGTGATTTAGAAATTAGAACATTATAAAAGTGATTTTAACCATTTCAAAATATAACCATCATGGAGTGGTCTACTGGTTAAGAGAGCTTTGGGGAACTAAGAGATGAAGGGTTCAATTCATGGTGACCTACATAGGAATTAATTTCCTACGAGTTTTCATTATATCCAAATATTGTTGGGTTAGGCGGTATGTCCCATGACATGTCATGGTCGAGGTGCGCTAAATCAACATATAACTCCAAAATATGCCCTAAATCAACAAAATCCATGCTCAACTTATGTTGTGACTTTTGAGTGATTTTAAGTTCTTCCTACTTTGTAGTCCATAAATCACAGAAACTTGAGTTATTTACAGAGAAAACAGTTTCTTTTTCAATTATGCTGCACTTTTATTCTGGCCCGGACTGAATCTTTGTTTCAAGACCAGGTTCGATATCAAGCAAGCCTACTTTACAAGAATCGAGTCAAATTTCCTCATTTATTTCATAGTCAAAATGCATTGTTGATCTCAATGATGATTTTGGTTTCTCTACTCATTTCAGAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTTAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGGTTTGTTCATATCACCATATAACTGAGCAAAGCTCGATGCTTGGCATTTTTGTTTTGCTCGTGTGTGTGCGTGTGCATGTGCGTGCATGAATAACTGCCCTTGATCATATTTGAAAGTTGAGGTCATGTTTTGAACCTCCATTTTTTTTTTCTTTCAGAAATTCCTTTCATTGTAGATTTTATATGATATATATGTTTTCTTGATGCCTTGTTCGCGCAGAAATACCGGCTCGGGAAGCAATCGTTCAAGGAATTGATTGAGAACTCAAAAGATGGTACAAACTTCCTCTTGGTTAGGATTTGGCAGTTTCCCGTTTTGTTTTGTCTGCTTTGCTGCATTTGATGAAATGAACTATCAAATATTTCAAATTGTGGGGCATGCTTACTCTTTTTTATTTAGAGAATCACATAACAACTTGCCTGAAACACGGGTCCTGGTTTTTTGTTCTAAATAATTTGTGTTTGCTGTTTGATTTACAAAGTTTTCTTGGAAGTAACTCCAGGAAAAATGTTTAAATGACTCTTTGTATGGCCTTTCAGCTTCTTGTATGGCAGAAAGTCAAGAAACAAGCTCCTGTTCGTCGCCATCTTCCCGAATAATGACACAGGATCTGAATGAGTATGTTGAAGTTTTTCTTTCTACCTTTTGGATTTTCATGCTTGATCTATCTGTCTTTAGTTGAGTACTTTTGTTTTTCGAACAGCGGTTTCCAAGTCACGGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTTAGTCTGTGTTTTACCTTTTCGTATTGGACTTTTATGTATTTTTTGGCCATATGTCGTATTAGGGTTCTATGAGAGTGTACTATATAAACTCTCTTAACACCTTAGTCCCGTTTGACCAAATATTTGTGTTTTTATCTCAATAAAACGGTTCTCTTCTCTGCATGTGGACGTAGTTAACACAACGTTGGTGAAGCAAATTGATGTGTTTTGTTTCACGTTTTATTTACTTTCTTGATTGTTGTTTTCTTTTTTCACAACAATCTCCCCCAGCCCACGAGTACTCTTCCAATCCGAAACTACTGCAATAAATCTTGAGAAAAGTCCTTGTTCTCTATATTTAACTTCATGGTTTTACTGTAAGCAGGTGCAGCGCCATCTTCAACTTCGCATTGAAGCACAAGGCAAATACTTGCAATTGATACTCGAGCGAGCTTGTCAAGCTTTGAGCGATCAGACTGCAGCATCTACGGGACTCGAAGCTGCGAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGACTCTAAAGAGATGGCACCATTGGAGTCTCAAAAAGTGCTTCCCTTCTCAGAACTTGCTGCTGCTCTAGAAAACCGAAAAGCTCCTGCCATTATGGCTCGAATAGGCGATTGCTCCATGGATAGCTGCTTGACATCTGCTGGTAGCCCGGTTTCTCCCATCAGAGTAGGATCAACTGGCACCGCAATGAAAAGACCGAGACCAGTTTTTAGCCATGGAGATTCGATGGCTCTCGAGGGCAATGCGCGCCACGAAGTCGAGTGGATGATGAGTAATATTGGATGAAACTTAGGACTTTTCTTAAAGTCCAGTATTTTCTTTCTTCTAATCTACCTTTTGTCTTCATCTTTCTGTTTAGCTCATTCAAATGTGTTCACATCATTGATGAAGTGTTATACAATCTATTTTGTTGTTTGTATATTCTTTGTAATCAGACCCTTTTTGCTTGTTGTAGTTTCTTTGATCTGCAATTAGATCTCCATCTTCCTGTACATTCTTTTCAGTTTGTTCATTAGAGAAT

mRNA sequence

GGATTTTTGTTTTCTCTTTGGTCCTTACATTTTCGTTTTATTCTAAATTTCTCTACTCGCCGGAGCAAAATGCTCTCTGGGTTTTCTCAGGAACCGGCCGGAATGTACTCGGCCATTCCGGCGATGCCGATCGACGGCGGCGTCCACGGCAAGTTTCAGAGTTCTCTCGACGGAACGAATCTTCCAGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGTTGGACGGCGGAGCTCCACGAGCGATTCGTCGACGCCGTCACTCAGCTCGGCGGTCCTGACAAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTTAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATACCGGCTCGGGAAGCAATCGTTCAAGGAATTGATTGAGAACTCAAAAGATGCTTCTTGTATGGCAGAAAGTCAAGAAACAAGCTCCTGTTCGTCGCCATCTTCCCGAATAATGACACAGGATCTGAATGACGGTTTCCAAGTCACGGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTGCAGCGCCATCTTCAACTTCGCATTGAAGCACAAGGCAAATACTTGCAATTGATACTCGAGCGAGCTTGTCAAGCTTTGAGCGATCAGACTGCAGCATCTACGGGACTCGAAGCTGCGAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGACTCTAAAGAGATGGCACCATTGGAGTCTCAAAAAGTGCTTCCCTTCTCAGAACTTGCTGCTGCTCTAGAAAACCGAAAAGCTCCTGCCATTATGGCTCGAATAGGCGATTGCTCCATGGATAGCTGCTTGACATCTGCTGGTAGCCCGGTTTCTCCCATCAGAGTAGGATCAACTGGCACCGCAATGAAAAGACCGAGACCAGTTTTTAGCCATGGAGATTCGATGGCTCTCGAGGGCAATGCGCGCCACGAAGTCGAGTGGATGATGAGTAATATTGGATGAAACTTAGGACTTTTCTTAAAGTCCAGTATTTTCTTTCTTCTAATCTACCTTTTGTCTTCATCTTTCTGTTTAGCTCATTCAAATGTGTTCACATCATTGATGAAGTGTTATACAATCTATTTTGTTGTTTGTATATTCTTTGTAATCAGACCCTTTTTGCTTGTTGTAGTTTCTTTGATCTGCAATTAGATCTCCATCTTCCTGTACATTCTTTTCAGTTTGTTCATTAGAGAAT

Coding sequence (CDS)

ATGCTCTCTGGGTTTTCTCAGGAACCGGCCGGAATGTACTCGGCCATTCCGGCGATGCCGATCGACGGCGGCGTCCACGGCAAGTTTCAGAGTTCTCTCGACGGAACGAATCTTCCAGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGTTGGACGGCGGAGCTCCACGAGCGATTCGTCGACGCCGTCACTCAGCTCGGCGGTCCTGACAAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTTAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATACCGGCTCGGGAAGCAATCGTTCAAGGAATTGATTGAGAACTCAAAAGATGCTTCTTGTATGGCAGAAAGTCAAGAAACAAGCTCCTGTTCGTCGCCATCTTCCCGAATAATGACACAGGATCTGAATGACGGTTTCCAAGTCACGGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTGCAGCGCCATCTTCAACTTCGCATTGAAGCACAAGGCAAATACTTGCAATTGATACTCGAGCGAGCTTGTCAAGCTTTGAGCGATCAGACTGCAGCATCTACGGGACTCGAAGCTGCGAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGACTCTAAAGAGATGGCACCATTGGAGTCTCAAAAAGTGCTTCCCTTCTCAGAACTTGCTGCTGCTCTAGAAAACCGAAAAGCTCCTGCCATTATGGCTCGAATAGGCGATTGCTCCATGGATAGCTGCTTGACATCTGCTGGTAGCCCGGTTTCTCCCATCAGAGTAGGATCAACTGGCACCGCAATGAAAAGACCGAGACCAGTTTTTAGCCATGGAGATTCGATGGCTCTCGAGGGCAATGCGCGCCACGAAGTCGAGTGGATGATGAGTAATATTGGATGA

Protein sequence

MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSELAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMALEGNARHEVEWMMSNIG

Homology

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BLAST of Sed0003960 vs. NCBI nr
Match: XP_023539057.1 (protein PHR1-LIKE 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572.4 bits (1474), Expect = 2.4e-159
Identity = 297/316 (93.99%), Postives = 301/316 (95.25%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAI A+PID G HGKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SCMAESQETSS  SPSSR+MTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCMAESQETSSSLSPSSRLMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ IL+RACQALSDQTAAS GLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE
Sbjct: 181 QGKYLQTILDRACQALSDQTAASAGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +MARIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRP FSHGDSM L
Sbjct: 241 LAAALENRKAPTVMARIGDCSMDSCLTSAGSPVSPIGVGSTVTAMKRPRPAFSHGDSMVL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARHEVEWMMSNIG
Sbjct: 301 EGNARHEVEWMMSNIG 316

[Close]

BLAST of Sed0003960 vs. NCBI nr
Match: XP_022974989.1 (protein PHR1-LIKE 2-like [Cucurbita maxima] >KAG6597290.1 Protein PHR1-LIKE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 572.0 bits (1473), Expect = 3.2e-159
Identity = 297/316 (93.99%), Postives = 301/316 (95.25%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAI A+PID G HGKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SCMAESQETSS  SPSSR+MTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCMAESQETSSSLSPSSRLMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ IL+RACQALSDQTAAS GLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE
Sbjct: 181 QGKYLQSILDRACQALSDQTAASAGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +MARIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRP FSHGDSM L
Sbjct: 241 LAAALENRKAPTVMARIGDCSMDSCLTSAGSPVSPIGVGSTVTAMKRPRPAFSHGDSMVL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARHEVEWMMSNIG
Sbjct: 301 EGNARHEVEWMMSNIG 316

[Close]

BLAST of Sed0003960 vs. NCBI nr
Match: XP_022957549.1 (protein PHR1-LIKE 2-like [Cucurbita moschata])

HSP 1 Score: 570.9 bits (1470), Expect = 7.0e-159
Identity = 296/316 (93.67%), Postives = 301/316 (95.25%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAI A+PID G HGKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SCMAESQETSS  SPSSR+MTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCMAESQETSSSLSPSSRLMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ IL+RACQALSDQTAAS GLEAAREELSELAIKVSNDSK+MAPLESQKVLPFSE
Sbjct: 181 QGKYLQSILDRACQALSDQTAASAGLEAAREELSELAIKVSNDSKDMAPLESQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +MARIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRP FSHGDSM L
Sbjct: 241 LAAALENRKAPTVMARIGDCSMDSCLTSAGSPVSPIGVGSTVTAMKRPRPAFSHGDSMVL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARHEVEWMMSNIG
Sbjct: 301 EGNARHEVEWMMSNIG 316

[Close]

BLAST of Sed0003960 vs. NCBI nr
Match: XP_038878043.1 (protein PHR1-LIKE 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 569.7 bits (1467), Expect = 1.6e-158
Identity = 297/316 (93.99%), Postives = 303/316 (95.89%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAIPA+P+DGG  GKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDGG-GGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SC+AESQETSS SSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCIAESQETSSSSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ ILERACQALSDQ AAS GLEAAREELSELAIKVSNDSKEMAPLE+QKVLPFSE
Sbjct: 181 QGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +M RIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRPVFSHGDSMAL
Sbjct: 241 LAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMAL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARH+VEWMMSNIG
Sbjct: 301 EGNARHDVEWMMSNIG 315

[Close]

BLAST of Sed0003960 vs. NCBI nr
Match: XP_008438354.1 (PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo])

HSP 1 Score: 567.8 bits (1462), Expect = 6.0e-158
Identity = 296/316 (93.67%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAIPA+P+DGG  GKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDGG-GGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SC+AESQETSS SSPSSRIM QDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ ILERACQALSDQ AAS GLEAAREELSELAIKVSNDSKEMAPLE+QKVLPFSE
Sbjct: 181 QGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +M RIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRPVFSHGDSMAL
Sbjct: 241 LAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMAL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARH+VEWMMSNIG
Sbjct: 301 EGNARHDVEWMMSNIG 315

[Close]

BLAST of Sed0003960 vs. ExPASy Swiss-Prot
Match: Q94A57 (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.8e-88
Identity = 182/271 (67.16%), Postives = 214/271 (78.97%), Query Frame = 0


Query: 12  MYSAIPAMPIDGG-VHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI ++P+DGG V G +   LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQ
Sbjct: 1   MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ 60

Query: 72  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETS 131
           LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+Q+ KE  ENSKDASC+ ESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTG 120

Query: 132 SCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILE 191
           S S+ S R+  Q+ N+G+QVTEALR QMEVQRRLH+QLEVQR LQLRIEAQGKYLQ ILE
Sbjct: 121 SSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSILE 180

Query: 192 RACQALSDQTAASTGLEAAREELSELAIKVSNDSK--EMAPLESQKVL---PFSELAAAL 251
           +AC+A  +Q A   GLEAAREELSELAIKVSN S+   +   ++ K++     SELA A+
Sbjct: 181 KACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAI 240

Query: 252 ENRKAPAIMARIGDCSMDSCLTSA--GSPVS 275
           +N+          +CS++S LTS   GS +S
Sbjct: 241 DNKNNITT-----NCSVESSLTSITHGSSIS 266

[Close]

BLAST of Sed0003960 vs. ExPASy Swiss-Prot
Match: Q8LAJ7 (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 6.3e-86
Identity = 191/315 (60.63%), Postives = 226/315 (71.75%), Query Frame = 0


Query: 12  MYSAI-PAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI  ++P+DG + G +    DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVTQ
Sbjct: 1   MYSAIRSSLPLDGSL-GDYS---DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQ 60

Query: 72  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETS 131
           LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+QS KE I+NSKD SC+AESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDTG 120

Query: 132 SCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILE 191
           S S+ S R+  Q+ N+ +QVTEALR QMEVQRRLHEQLEVQR LQLRIEAQGKYLQ ILE
Sbjct: 121 SSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 180

Query: 192 RACQALSDQTAASTGLEAAREELSELAIKVS-----NDSKEMAPLESQKVLPFSELAAAL 251
           +AC+A+ +Q  A  GLEAAREELSELAIK S       +          +   SELA A+
Sbjct: 181 KACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAI 240

Query: 252 ENRKAPAIMARIGDCSMDSCLTSA--GSPVSPIRVGSTGTAMKRPRPVFSHGDSMALEGN 311
           E++          +CS +S LTS+  GSPV      S     KR R VF +GDS+ +   
Sbjct: 241 EHK---------NNCSAESSLTSSTVGSPV------SAALMKKRQRGVFGNGDSVVV--- 292

Query: 312 ARHEVEWMM--SNIG 317
             H+  W+M  S+IG
Sbjct: 301 -GHDAGWVMPSSSIG 292

[Close]

BLAST of Sed0003960 vs. ExPASy Swiss-Prot
Match: Q9SAK5 (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 7.8e-52
Identity = 115/190 (60.53%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 26  HGKFQSSLDGTN------LPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATP 85
           H K  SS++G+       + GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGGPDKATP
Sbjct: 3   HAKKPSSMNGSYENRAMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATP 62

Query: 86  KTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETSSCSSPSSRI 145
           KTIMR MGVKGLTLYHLKSHLQK+RLGKQ  KE  ++S      A + +     + SS +
Sbjct: 63  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGM 122

Query: 146 MTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILERACQALSDQ 205
           M++++N+         +QMEVQRRLHEQLEVQRHLQLRIEAQGKY+Q ILERACQ L+ +
Sbjct: 123 MSRNMNE---------MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGE 182

Query: 206 TAASTGLEAA 210
             A+    AA
Sbjct: 183 NMAAATAAAA 183

[Close]

BLAST of Sed0003960 vs. ExPASy Swiss-Prot
Match: Q9SQQ9 (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.8e-49
Identity = 118/239 (49.37%), Postives = 157/239 (65.69%), Query Frame = 0


Query: 37  NLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHL 96
           N PGD+ L+L++D KPRL+WT +LHERF++AV QLGG DKATPKTIM+ MG+ GLTLYHL
Sbjct: 31  NSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHL 90

Query: 97  KSHLQKYRLGKQSFKELIENSKDASCMAESQETSSCSSPSSRIMTQDLNDGFQ------V 156
           KSHLQKYRL K    +   +      M   +E    +  +  I +++L+ G Q      +
Sbjct: 91  KSHLQKYRLSKNLNGQANNSFNKIGIMTMMEEK---TPDADEIQSENLSIGPQPNKNSPI 150

Query: 157 TEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILERACQALSDQTAASTGLEAAR 216
            EAL++Q+EVQRRLHEQLEVQRHLQLRIEAQGKYLQ +LE+A + L  Q   + G+EAA+
Sbjct: 151 GEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAK 210

Query: 217 EELSELAIKVSNDSKEMAPLESQKVLPFSELAAALENRKAPAIMARIGDCSMDSCLTSA 270
            +LSEL  KVS +    + LE +++     L +       P       DCS++SCLTS+
Sbjct: 211 VQLSELVSKVSAEYPNSSFLEPKEL---QNLCSQQMQTNYPP------DCSLESCLTSS 257

[Close]

BLAST of Sed0003960 vs. ExPASy Swiss-Prot
Match: E5L8F7 (Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.8e-48
Identity = 106/164 (64.63%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 40  GDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 99
           GD+ LVLT+DPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSH
Sbjct: 24  GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 83

Query: 100 LQKYRLGKQSFKELIENSKDASCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQME 159
           LQK+RLGKQ  KE  ++S      A + E    ++ SS ++ +++N+         +Q+E
Sbjct: 84  LQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNE---------MQIE 143

Query: 160 VQRRLHEQLEVQRHLQLRIEAQGKYLQLILERACQALSDQTAAS 204
           VQRRLHEQLEVQ+HLQLRIEAQGKY+Q ILE+A Q L+ +  AS
Sbjct: 144 VQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMAS 178

[Close]

BLAST of Sed0003960 vs. ExPASy TrEMBL
Match: A0A6J1IJ50 (protein PHR1-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111473855 PE=3 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.5e-159
Identity = 297/316 (93.99%), Postives = 301/316 (95.25%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAI A+PID G HGKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SCMAESQETSS  SPSSR+MTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCMAESQETSSSLSPSSRLMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ IL+RACQALSDQTAAS GLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE
Sbjct: 181 QGKYLQSILDRACQALSDQTAASAGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +MARIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRP FSHGDSM L
Sbjct: 241 LAAALENRKAPTVMARIGDCSMDSCLTSAGSPVSPIGVGSTVTAMKRPRPAFSHGDSMVL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARHEVEWMMSNIG
Sbjct: 301 EGNARHEVEWMMSNIG 316

[Close]

BLAST of Sed0003960 vs. ExPASy TrEMBL
Match: A0A6J1H296 (protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458885 PE=3 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 3.4e-159
Identity = 296/316 (93.67%), Postives = 301/316 (95.25%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAI A+PID G HGKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SCMAESQETSS  SPSSR+MTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCMAESQETSSSLSPSSRLMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ IL+RACQALSDQTAAS GLEAAREELSELAIKVSNDSK+MAPLESQKVLPFSE
Sbjct: 181 QGKYLQSILDRACQALSDQTAASAGLEAAREELSELAIKVSNDSKDMAPLESQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +MARIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRP FSHGDSM L
Sbjct: 241 LAAALENRKAPTVMARIGDCSMDSCLTSAGSPVSPIGVGSTVTAMKRPRPAFSHGDSMVL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARHEVEWMMSNIG
Sbjct: 301 EGNARHEVEWMMSNIG 316

[Close]

BLAST of Sed0003960 vs. ExPASy TrEMBL
Match: A0A1S3AWU1 (myb family transcription factor APL isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483479 PE=3 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 2.9e-158
Identity = 296/316 (93.67%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAIPA+P+DGG  GKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDGG-GGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKDA
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDA 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
           SC+AESQETSS SSPSSRIM QDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 SCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ ILERACQALSDQ AAS GLEAAREELSELAIKVSNDSKEMAPLE+QKVLPFSE
Sbjct: 181 QGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +M RIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRPVFSHGDSMAL
Sbjct: 241 LAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMAL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARH+VEWMMSNIG
Sbjct: 301 EGNARHDVEWMMSNIG 315

[Close]

BLAST of Sed0003960 vs. ExPASy TrEMBL
Match: A0A1S3AWT2 (myb family transcription factor APL isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483479 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.6e-154
Identity = 292/316 (92.41%), Postives = 297/316 (93.99%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60
           MLSGFSQEPAGMYSAIPA+P+DGG  GKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAEL
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDGG-GGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAEL 60

Query: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDA 120
           HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKD 
Sbjct: 61  HERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD- 120

Query: 121 SCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180
               ESQETSS SSPSSRIM QDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
Sbjct: 121 ----ESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA 180

Query: 181 QGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFSE 240
           QGKYLQ ILERACQALSDQ AAS GLEAAREELSELAIKVSNDSKEMAPLE+QKVLPFSE
Sbjct: 181 QGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSE 240

Query: 241 LAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 300
           LAAALENRKAP +M RIGDCSMDSCLTSAGSPVSPI VGST TAMKRPRPVFSHGDSMAL
Sbjct: 241 LAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMAL 300

Query: 301 EGNARHEVEWMMSNIG 317
           EGNARH+VEWMMSNIG
Sbjct: 301 EGNARHDVEWMMSNIG 310

[Close]

BLAST of Sed0003960 vs. ExPASy TrEMBL
Match: A0A6J1D1J2 (protein PHR1-LIKE 2 OS=Momordica charantia OX=3673 GN=LOC111016140 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.1e-153
Identity = 290/317 (91.48%), Postives = 298/317 (94.01%), Query Frame = 0


Query: 5   FSQEPAGMYSAIPAMPIDGGV-----HGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAE 64
           F  E AGMYSAIPA+PIDGGV     HGKFQ SLDGTNLPGDACLVLTSDPKPRLRWTAE
Sbjct: 70  FYPEAAGMYSAIPALPIDGGVGVGVGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 129

Query: 65  LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKD 124
           LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKE  ENSKD
Sbjct: 130 LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 189

Query: 125 ASCMAESQETSSCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE 184
           ASC+AESQETSS SSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE
Sbjct: 190 ASCIAESQETSSSSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE 249

Query: 185 AQGKYLQLILERACQALSDQTAASTGLEAAREELSELAIKVSNDSKEMAPLESQKVLPFS 244
           AQGKYLQ ILERACQALSDQ AAS GLEAAREELS+LAIKVSND+K+MAPLE+QKVLPFS
Sbjct: 250 AQGKYLQSILERACQALSDQAAASAGLEAAREELSDLAIKVSNDTKDMAPLETQKVLPFS 309

Query: 245 ELAAALENRKAPAIMARIGDCSMDSCLTSAGSPVSPIRVGSTGTAMKRPRPVFSHGDSMA 304
           ELAAALENRKAP +MARIGDCSMDSCLTSAGSPVSPIRVG+T TAMKRPRPVF  GDSMA
Sbjct: 310 ELAAALENRKAPTVMARIGDCSMDSCLTSAGSPVSPIRVGTTATAMKRPRPVF--GDSMA 369

Query: 305 LEGNARHEVEWMMSNIG 317
           LEGNARHEVEWMMSNIG
Sbjct: 370 LEGNARHEVEWMMSNIG 384

[Close]

BLAST of Sed0003960 vs. TAIR 10
Match: AT3G24120.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 325.5 bits (833), Expect = 4.8e-89
Identity = 182/271 (67.16%), Postives = 214/271 (78.97%), Query Frame = 0


Query: 12  MYSAIPAMPIDGG-VHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI ++P+DGG V G +   LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQ
Sbjct: 1   MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ 60

Query: 72  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETS 131
           LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+Q+ KE  ENSKDASC+ ESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTG 120

Query: 132 SCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILE 191
           S S+ S R+  Q+ N+G+QVTEALR QMEVQRRLH+QLEVQR LQLRIEAQGKYLQ ILE
Sbjct: 121 SSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSILE 180

Query: 192 RACQALSDQTAASTGLEAAREELSELAIKVSNDSK--EMAPLESQKVL---PFSELAAAL 251
           +AC+A  +Q A   GLEAAREELSELAIKVSN S+   +   ++ K++     SELA A+
Sbjct: 181 KACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAI 240

Query: 252 ENRKAPAIMARIGDCSMDSCLTSA--GSPVS 275
           +N+          +CS++S LTS   GS +S
Sbjct: 241 DNKNNITT-----NCSVESSLTSITHGSSIS 266

[Close]

BLAST of Sed0003960 vs. TAIR 10
Match: AT3G24120.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 320.1 bits (819), Expect = 2.0e-87
Identity = 182/274 (66.42%), Postives = 214/274 (78.10%), Query Frame = 0


Query: 12  MYSAIPAMPIDGG-VHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI ++P+DGG V G +   LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQ
Sbjct: 1   MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ 60

Query: 72  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETS 131
           LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+Q+ KE  ENSKDASC+ ESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTG 120

Query: 132 SCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLE---VQRHLQLRIEAQGKYLQL 191
           S S+ S R+  Q+ N+G+QVTEALR QMEVQRRLH+QLE   VQR LQLRIEAQGKYLQ 
Sbjct: 121 SSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQS 180

Query: 192 ILERACQALSDQTAASTGLEAAREELSELAIKVSNDSK--EMAPLESQKVL---PFSELA 251
           ILE+AC+A  +Q A   GLEAAREELSELAIKVSN S+   +   ++ K++     SELA
Sbjct: 181 ILEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELA 240

Query: 252 AALENRKAPAIMARIGDCSMDSCLTSA--GSPVS 275
            A++N+          +CS++S LTS   GS +S
Sbjct: 241 VAIDNKNNITT-----NCSVESSLTSITHGSSIS 269

[Close]

BLAST of Sed0003960 vs. TAIR 10
Match: AT4G13640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 318.9 bits (816), Expect = 4.5e-87
Identity = 191/315 (60.63%), Postives = 226/315 (71.75%), Query Frame = 0


Query: 12  MYSAI-PAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI  ++P+DG + G +    DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVTQ
Sbjct: 1   MYSAIRSSLPLDGSL-GDYS---DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQ 60

Query: 72  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETS 131
           LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+QS KE I+NSKD SC+AESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDTG 120

Query: 132 SCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILE 191
           S S+ S R+  Q+ N+ +QVTEALR QMEVQRRLHEQLEVQR LQLRIEAQGKYLQ ILE
Sbjct: 121 SSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 180

Query: 192 RACQALSDQTAASTGLEAAREELSELAIKVS-----NDSKEMAPLESQKVLPFSELAAAL 251
           +AC+A+ +Q  A  GLEAAREELSELAIK S       +          +   SELA A+
Sbjct: 181 KACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAI 240

Query: 252 ENRKAPAIMARIGDCSMDSCLTSA--GSPVSPIRVGSTGTAMKRPRPVFSHGDSMALEGN 311
           E++          +CS +S LTS+  GSPV      S     KR R VF +GDS+ +   
Sbjct: 241 EHK---------NNCSAESSLTSSTVGSPV------SAALMKKRQRGVFGNGDSVVV--- 292

Query: 312 ARHEVEWMM--SNIG 317
             H+  W+M  S+IG
Sbjct: 301 -GHDAGWVMPSSSIG 292

[Close]

BLAST of Sed0003960 vs. TAIR 10
Match: AT4G13640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 313.5 bits (802), Expect = 1.9e-85
Identity = 191/318 (60.06%), Postives = 226/318 (71.07%), Query Frame = 0


Query: 12  MYSAI-PAMPIDGGVHGKFQSSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI  ++P+DG + G +    DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVTQ
Sbjct: 1   MYSAIRSSLPLDGSL-GDYS---DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQ 60

Query: 72  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETS 131
           LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+QS KE I+NSKD SC+AESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDTG 120

Query: 132 SCSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLE---VQRHLQLRIEAQGKYLQL 191
           S S+ S R+  Q+ N+ +QVTEALR QMEVQRRLHEQLE   VQR LQLRIEAQGKYLQ 
Sbjct: 121 SSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEYTQVQRRLQLRIEAQGKYLQS 180

Query: 192 ILERACQALSDQTAASTGLEAAREELSELAIKVS-----NDSKEMAPLESQKVLPFSELA 251
           ILE+AC+A+ +Q  A  GLEAAREELSELAIK S       +          +   SELA
Sbjct: 181 ILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELA 240

Query: 252 AALENRKAPAIMARIGDCSMDSCLTSA--GSPVSPIRVGSTGTAMKRPRPVFSHGDSMAL 311
            A+E++          +CS +S LTS+  GSPV      S     KR R VF +GDS+ +
Sbjct: 241 VAIEHK---------NNCSAESSLTSSTVGSPV------SAALMKKRQRGVFGNGDSVVV 295

Query: 312 EGNARHEVEWMM--SNIG 317
                H+  W+M  S+IG
Sbjct: 301 ----GHDAGWVMPSSSIG 295

[Close]

BLAST of Sed0003960 vs. TAIR 10
Match: AT1G79430.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 5.5e-53
Identity = 115/190 (60.53%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 26  HGKFQSSLDGTN------LPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATP 85
           H K  SS++G+       + GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGGPDKATP
Sbjct: 3   HAKKPSSMNGSYENRAMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATP 62

Query: 86  KTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKELIENSKDASCMAESQETSSCSSPSSRI 145
           KTIMR MGVKGLTLYHLKSHLQK+RLGKQ  KE  ++S      A + +     + SS +
Sbjct: 63  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGM 122

Query: 146 MTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQLILERACQALSDQ 205
           M++++N+         +QMEVQRRLHEQLEVQRHLQLRIEAQGKY+Q ILERACQ L+ +
Sbjct: 123 MSRNMNE---------MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGE 182

Query: 206 TAASTGLEAA 210
             A+    AA
Sbjct: 183 NMAAATAAAA 183

The following BLAST results are available for this feature:

BLAST of Sed0003960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539057.1	2.4e-159	93.99	protein PHR1-LIKE 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974989.1	3.2e-159	93.99	protein PHR1-LIKE 2-like [Cucurbita maxima] >KAG6597290.1 Protein PHR1-LIKE 2, p...	[more]
XP_022957549.1	7.0e-159	93.67	protein PHR1-LIKE 2-like [Cucurbita moschata]	[more]
XP_038878043.1	1.6e-158	93.99	protein PHR1-LIKE 2 isoform X1 [Benincasa hispida]	[more]
XP_008438354.1	6.0e-158	93.67	PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo]	[more]

BLAST of Sed0003960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A57	6.8e-88	67.16	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1	[more]
Q8LAJ7	6.3e-86	60.63	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1	[more]
Q9SAK5	7.8e-52	60.53	Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 ...	[more]
Q9SQQ9	2.8e-49	49.37	Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1	[more]
E5L8F7	1.8e-48	64.63	Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV...	[more]

BLAST of Sed0003960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJ50	1.5e-159	93.99	protein PHR1-LIKE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111473855 PE=3 SV=1	[more]
A0A6J1H296	3.4e-159	93.67	protein PHR1-LIKE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458885 PE=3 SV=1	[more]
A0A1S3AWU1	2.9e-158	93.67	myb family transcription factor APL isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S3AWT2	5.6e-154	92.41	myb family transcription factor APL isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1D1J2	2.1e-153	91.48	protein PHR1-LIKE 2 OS=Momordica charantia OX=3673 GN=LOC111016140 PE=3 SV=1	[more]

BLAST of Sed0003960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24120.1	4.8e-89	67.16	Homeodomain-like superfamily protein	[more]
AT3G24120.2	2.0e-87	66.42	Homeodomain-like superfamily protein	[more]
AT4G13640.1	4.5e-87	60.63	Homeodomain-like superfamily protein	[more]
AT4G13640.2	1.9e-85	60.06	Homeodomain-like superfamily protein	[more]
AT1G79430.2	5.5e-53	60.53	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 206..226
None	No IPR available	GENE3D	1.10.10.60		coord: 50..109 e-value: 4.5E-30 score: 105.6
None	No IPR available	PANTHER	PTHR31499:SF6	PROTEIN PHR1-LIKE 2	coord: 12..313
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 54..104 e-value: 1.9E-7 score: 31.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 48..108 score: 12.943781
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 149..194 e-value: 1.4E-25 score: 88.7
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 51..106 e-value: 2.2E-24 score: 83.5
IPR044848	PHR1-like	PANTHER	PTHR31499	MYB FAMILY TRANSCRIPTION FACTOR PHL11	coord: 12..313
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 51..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003960.1	Sed0003960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity