Sed0003953 (gene) Chayote v1

Overview


Name	Sed0003953
Type	gene
Organism	Sechium edule (Chayote v1)
Description	hydroxyproline-rich glycoprotein family protein
Location	LG04: 44640278 .. 44641396 (-)
RNA-Seq Expression	Sed0003953
Synteny	Sed0003953

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTGATCTAAACGTTACTCCCCAAACTGAGGATGAGGGTTTGAATCTTGAACTCTCTCTCGCTCCTCCCTCGTCGTCATCGTCCCCACCGCACCATAAACCGAAACAATCCAAATCGGTTAAGTTTCCATCGATATGCCACCAAGAACCCCCCAATATCCCCGAGCTAGCGCCATTGCAACTAAGTTTATCCCAAGAGCCATTGCAACCGGGGCCATTGCTTGGGCCATCTCAACCGAATTCACCCCAACGGGGGCCATTATTGCAACCTTGGCCATCCCGACAGGGGTCATTGCAATTACCGGGGCCATCCCAACCAGAGCCATTGCAACCTTGGCCATTCCGACAAGAGTCATTGCAATTACCGGGGCCATCCCAACCGAATTCATCCCAACGGGAGCCTTTGCAACCTTGGCCATCCCGACAGGGATCATCGCAATTACCGGGGCCATCCCAACCAAATTCATCCCAACGGGAGCCTTTGCAACCTTGGCCATCCCGACAGGGATCATCGCAATTACAGGTGCCAAAACCACCATTAAATCAGAGGCAACATAAAAGAAGAGCGAACGACATATTGACGGCAAATCGCCAGGAACCAGCAATAATGAAAGAGAGACGACAAAGAACAAAAGCAGACGACAGGGAGATCGATCCACCGTATCCCTGGTCGACGAACCGTCGAGCCAAGATCCACACAATGGAGTACCTACGATCGAACAACATAGTAAGGATCACAGGGGAGGTAGAGTGCAACCAATGCAAAGAAAAGTACGAAATGGAGTACGACTTAGTATCGAAGTTTGAGGAGATAGCGAGGTTCATAGCAAGAAACGGGGAAGATTGTAACAACAGAGCTCCGAGTTCATGGGCGACGCCAGTTGCACTGAATTGTAGGATGTGCAACCAACAAAACTGCGTAGAAGCCGTGATTCCGAAGAGCGATTTCGAGACCATAAATTGGTTGTTCTTGTTCTTGGGACAAATGCTTGGAAATTTGCGACACGACCAACTCAAAAAATTCTGTACTGAGACCAACAATCATCGAACTGGTGCAAAGGATCGCCTTCTTTATCTCACTTACATTACTTTGTATAAACAACTTAAGGGCTAG

mRNA sequence

ATGGGGATTGATCTAAACGTTACTCCCCAAACTGAGGATGAGGGTTTGAATCTTGAACTCTCTCTCGCTCCTCCCTCGTCGTCATCGTCCCCACCGCACCATAAACCGAAACAATCCAAATCGGTTAAGTTTCCATCGATATGCCACCAAGAACCCCCCAATATCCCCGAGCTAGCGCCATTGCAACTAAGTTTATCCCAAGAGCCATTGCAACCGGGGCCATTGCTTGGGCCATCTCAACCGAATTCACCCCAACGGGGGCCATTATTGCAACCTTGGCCATCCCGACAGGGGTCATTGCAATTACCGGGGCCATCCCAACCAGAGCCATTGCAACCTTGGCCATTCCGACAAGAGTCATTGCAATTACCGGGGCCATCCCAACCGAATTCATCCCAACGGGAGCCTTTGCAACCTTGGCCATCCCGACAGGGATCATCGCAATTACCGGGGCCATCCCAACCAAATTCATCCCAACGGGAGCCTTTGCAACCTTGGCCATCCCGACAGGGATCATCGCAATTACAGGTGCCAAAACCACCATTAAATCAGAGGCAACATAAAAGAAGAGCGAACGACATATTGACGGCAAATCGCCAGGAACCAGCAATAATGAAAGAGAGACGACAAAGAACAAAAGCAGACGACAGGGAGATCGATCCACCGTATCCCTGGTCGACGAACCGTCGAGCCAAGATCCACACAATGGAGTACCTACGATCGAACAACATAGTAAGGATCACAGGGGAGGTAGAGTGCAACCAATGCAAAGAAAAGTACGAAATGGAGTACGACTTAGTATCGAAGTTTGAGGAGATAGCGAGGTTCATAGCAAGAAACGGGGAAGATTGTAACAACAGAGCTCCGAGTTCATGGGCGACGCCAGTTGCACTGAATTGTAGGATGTGCAACCAACAAAACTGCGTAGAAGCCGTGATTCCGAAGAGCGATTTCGAGACCATAAATTGGTTGTTCTTGTTCTTGGGACAAATGCTTGGAAATTTGCGACACGACCAACTCAAAAAATTCTGTACTGAGACCAACAATCATCGAACTGGTGCAAAGGATCGCCTTCTTTATCTCACTTACATTACTTTGTATAAACAACTTAAGGGCTAG

Coding sequence (CDS)

ATGGGGATTGATCTAAACGTTACTCCCCAAACTGAGGATGAGGGTTTGAATCTTGAACTCTCTCTCGCTCCTCCCTCGTCGTCATCGTCCCCACCGCACCATAAACCGAAACAATCCAAATCGGTTAAGTTTCCATCGATATGCCACCAAGAACCCCCCAATATCCCCGAGCTAGCGCCATTGCAACTAAGTTTATCCCAAGAGCCATTGCAACCGGGGCCATTGCTTGGGCCATCTCAACCGAATTCACCCCAACGGGGGCCATTATTGCAACCTTGGCCATCCCGACAGGGGTCATTGCAATTACCGGGGCCATCCCAACCAGAGCCATTGCAACCTTGGCCATTCCGACAAGAGTCATTGCAATTACCGGGGCCATCCCAACCGAATTCATCCCAACGGGAGCCTTTGCAACCTTGGCCATCCCGACAGGGATCATCGCAATTACCGGGGCCATCCCAACCAAATTCATCCCAACGGGAGCCTTTGCAACCTTGGCCATCCCGACAGGGATCATCGCAATTACAGGTGCCAAAACCACCATTAAATCAGAGGCAACATAAAAGAAGAGCGAACGACATATTGACGGCAAATCGCCAGGAACCAGCAATAATGAAAGAGAGACGACAAAGAACAAAAGCAGACGACAGGGAGATCGATCCACCGTATCCCTGGTCGACGAACCGTCGAGCCAAGATCCACACAATGGAGTACCTACGATCGAACAACATAGTAAGGATCACAGGGGAGGTAGAGTGCAACCAATGCAAAGAAAAGTACGAAATGGAGTACGACTTAGTATCGAAGTTTGAGGAGATAGCGAGGTTCATAGCAAGAAACGGGGAAGATTGTAACAACAGAGCTCCGAGTTCATGGGCGACGCCAGTTGCACTGAATTGTAGGATGTGCAACCAACAAAACTGCGTAGAAGCCGTGATTCCGAAGAGCGATTTCGAGACCATAAATTGGTTGTTCTTGTTCTTGGGACAAATGCTTGGAAATTTGCGACACGACCAACTCAAAAAATTCTGTACTGAGACCAACAATCATCGAACTGGTGCAAAGGATCGCCTTCTTTATCTCACTTACATTACTTTGTATAAACAACTTAAGGGCTAG

Protein sequence

MGIDLNVTPQTEDEGLNLELSLAPPSSSSSPPHHKPKQSKSVKFPSICHQEPPNIPELAPLQLSLSQEPLQPGPLLGPSQPNSPQRGPLLQPWPSRQGSLQLPGPSQPEPLQPWPFRQESLQLPGPSQPNSSQREPLQPWPSRQGSSQLPGPSQPNSSQREPLQPWPSRQGSSQLQVPKPPLNQRQHKRRANDILTANRQEPAIMKERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYDLVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSDFETINWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLKG

Homology

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BLAST of Sed0003953 vs. NCBI nr
Match: XP_008439384.1 (PREDICTED: protein PAF1 homolog [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 2.0e-51
Identity = 153/358 (42.74%), Postives = 197/358 (55.03%), Query Frame = 0


Query: 17  NLELSLAPPSSSSSPPHHKPKQSKSVKFPSICHQEPPNIPELAPLQLSLSQEPLQPGPLL 76
           NL+LSL PP  S  PP  +   +    F S     PP++  L  L LSL      P P  
Sbjct: 11  NLQLSLRPPFQSPPPPSPQSLFTLHSSFQS----PPPSLQSLQSL-LSLRLPTQSPTP-- 70

Query: 77  GPSQPNSPQRGPLLQPWPSRQGSLQL---PGPSQPEPLQPWPFRQESLQLPGPSQPNSSQ 136
            P+Q +  Q    LQP PS      L   P P  P P    P     L L  P  P S  
Sbjct: 71  -PTQSSLSQH-LSLQPPPSPPHERLLCVSPQPPHPPPPPEHPL-SFHLLLESPPPPPSPA 130

Query: 137 REPLQPWPSRQGSSQLPGPSQPNSSQREPLQPWPSRQGSSQLQVPKPPLNQRQHKRRAND 196
             P          S LP P Q      + LQP P++Q  +Q Q P+ P  +RQ       
Sbjct: 131 EFP----------SSLPLPLQSPPLPFDYLQPPPTQQ--TQNQPPEIPKPKRQ------- 190

Query: 197 ILTANRQEPAIMKERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVEC 256
                 Q P I K +R+RT+AD+  I+PPYPWST + A IH +EYL +NNI+ I GEV+C
Sbjct: 191 ---TQNQPPEIPKPKRRRTQADNSRIEPPYPWSTEKGAVIHKLEYLEANNILTIKGEVKC 250

Query: 257 NQCKEKYEMEYDLVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVI 316
            +C  K E+EY+L+SKF+EI RFI R  ++ ++RAP  W  P+ LNC  CN++ CVE +I
Sbjct: 251 KRCDRKDEIEYELISKFDEIRRFIEREKDNMHDRAPDRWVNPILLNCNFCNKEECVEPII 310

Query: 317 PKSDFETINWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
            +++   INWLFL LG  LG L+  QLK FCT+TN HRTGAKDRL+YLTY+ L KQL+
Sbjct: 311 SEAN-SNINWLFLLLGNFLGCLKLSQLKYFCTQTNIHRTGAKDRLIYLTYLALCKQLQ 335

[Close]

BLAST of Sed0003953 vs. NCBI nr
Match: XP_038895979.1 (junction-mediating and -regulatory protein-like [Benincasa hispida])

HSP 1 Score: 210.7 bits (535), Expect = 2.2e-50
Identity = 119/257 (46.30%), Postives = 161/257 (62.65%), Query Frame = 0


Query: 120 SLQLPGPSQPNSSQREPLQPWPSRQGSSQLPGPSQPNSSQREPLQPWPSRQGSSQLQVPK 179
           SL+LP P    S    P  P P       L  P  P+     PL+ +P    ++ L   K
Sbjct: 20  SLRLPSPPPLESPPPPPPYPPP-------LESPPPPS-----PLE-YPLLSTTTSLSPRK 79

Query: 180 PPLNQRQHKRRANDILTANRQEPAIMKE-----RRQRTKADDREIDPPYPWSTNRRAKIH 239
            P    +   + N+  + ++Q+P  + E     RR+RT+AD   I+PPYPWST+RRA IH
Sbjct: 80  TPNESEEIPTQHNNETSNHQQQPMEIVEPQPRPRRRRTRADMTRIEPPYPWSTDRRAVIH 139

Query: 240 TMEYLRSNNIVRITGEVECNQCKEKYEMEYDLVSKFEEIARFIARNGEDCNNRAPSSWAT 299
            ++YL+SNNIV I GEV+C +C++KYEMEYDL++KF EIARFI    +  ++RAP  W  
Sbjct: 140 ELKYLQSNNIVTIKGEVKCKKCEQKYEMEYDLMNKFNEIARFIEYEKDSMHDRAPKCWTK 199

Query: 300 PVALNCRMCNQQNCVEAVIPKSDFETINWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGA 359
           P+  NC +CN++ CVE VI + D+  INWLFL LG+ LG L+  QLK FC +TN HRTGA
Sbjct: 200 PILPNCNLCNKERCVEPVISEEDYTKINWLFLLLGKFLGCLKLKQLKYFCAQTNIHRTGA 259

Query: 360 KDRLLYLTYITLYKQLK 372
           K+RLLYL Y+TL  QL+
Sbjct: 260 KNRLLYLIYLTLCYQLQ 263

[Close]

BLAST of Sed0003953 vs. NCBI nr
Match: XP_022135938.1 (probable serine/threonine-protein kinase samkC [Momordica charantia])

HSP 1 Score: 208.8 bits (530), Expect = 8.3e-50
Identity = 126/298 (42.28%), Postives = 177/298 (59.40%), Query Frame = 0


Query: 78  PSQPNSPQRGPLLQPWPSRQGSLQLPGPSQPEPLQPWPFRQESLQLPGPSQPNSSQREPL 137
           P +   P +   L   PS + +     PS P PL   P + +SLQL         Q +PL
Sbjct: 76  PLENKVPPQQFYLHSLPSEESTSTPISPSDPHPLSSQP-QPQSLQL---------QPQPL 135

Query: 138 QPWPSRQGSSQLPGPSQPNSSQREPLQPWPSRQGSSQLQVPKPPLNQRQHKRRANDILTA 197
           QP P  Q    +P PS  + +  + L+P   R+ S +     P  ++++           
Sbjct: 136 QPQP--QPEPPIPHPSTSSCNTSQSLKPSRKRRSSQESPSTHPSSSEQR----------- 195

Query: 198 NRQEPAIMKERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCK 257
            +Q+P I   RR R K  D  I+PPYPWST  RA +H ++YL+ N I+ ITG+V+C+QC+
Sbjct: 196 -QQKPNI--SRRPRIKPKDTAIEPPYPWSTANRAVVHDLKYLQQNQILTITGDVKCSQCQ 255

Query: 258 EKYEMEYDLVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIP--- 317
           ++Y++EYDLV+KF+EIA FI +N +  ++RAPSSW  P   NC+ C Q++C+  VIP   
Sbjct: 256 KQYKIEYDLVTKFDEIASFIEKNKDTLHDRAPSSWTNPNLPNCKFCGQESCMRPVIPPED 315

Query: 318 -KSDFETINWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
              D++ INWLFL LGQM+G L    LK FCT TNNHRT AKDRL+YLTY++L KQL+
Sbjct: 316 EDDDYKNINWLFLLLGQMIGCLGLKHLKYFCTYTNNHRTAAKDRLVYLTYLSLCKQLQ 347

[Close]

BLAST of Sed0003953 vs. NCBI nr
Match: XP_022972400.1 (uncharacterized protein KIAA0754-like [Cucurbita maxima])

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-49
Identity = 94/170 (55.29%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 206 KERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYD 265
           + RR RT+AD R I+PPYPWS  +RA IH +EYL+SNNIV I G+V C +C+  YE+EY+
Sbjct: 428 RRRRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVMIKGDVRCKKCERYYEIEYN 487

Query: 266 LVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSD----FETI 325
           L++KF+EIARFI R  ++ ++RAP  W  P+  NC  C ++NCVE +IP  +    F  I
Sbjct: 488 LMNKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFRRI 547

Query: 326 NWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
           NWLFL LGQ++G L+  QLK FC  T NHRTGAKDRL++LTY+ L KQL+
Sbjct: 548 NWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQ 597

[Close]

BLAST of Sed0003953 vs. NCBI nr
Match: KAG7011696.1 (hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-49
Identity = 94/170 (55.29%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 206 KERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYD 265
           + RR RT+AD R I+PPYPWS  +RA IH +EYL+SNNIV I G+V C +C+  YE+EY+
Sbjct: 249 RRRRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYN 308

Query: 266 LVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSD----FETI 325
           L++KF+EIARFI R  ++ ++RAP  W  P+  NC  C ++NCVE +IP  +    F  I
Sbjct: 309 LMNKFDEIARFIERERDNMHDRAPICWKNPILPNCEYCREENCVEPMIPDEEDDNQFSRI 368

Query: 326 NWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
           NWLFL LGQ++G L+  QLK FC  T NHRTGAKDRL++LTY+ L KQL+
Sbjct: 369 NWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQ 418

[Close]

BLAST of Sed0003953 vs. ExPASy Swiss-Prot
Match: Q55CW2 (Probable serine/threonine-protein kinase samkC OS=Dictyostelium discoideum OX=44689 GN=samkC PE=3 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 63/207 (30.43%), Postives = 94/207 (45.41%), Query Frame = 0


Query: 20  LSLAPPSSSSSPPHHKPKQSKSVKFPSI------CHQEPPNIPELAPLQLSLSQEPLQPG 79
           L+ + P      P  KP+ S+S   PS          +PP   +  P       +P QP 
Sbjct: 458 LTSSEPQPLEPQPQPKPQTSQSKPKPSSSLSSSELPPQPPLESQSKPKPSQSKTQPTQPQ 517

Query: 80  PLLGPSQPNSPQRGPLLQPWPSRQGSLQLPGP-----SQPEPLQPWPFRQESLQLPGPSQ 139
             L PS P S     L +P P  Q S   P P     S+P PL+P P  Q S   P PS 
Sbjct: 518 SKLNPSSPPSSSSSSLSEP-PKPQPSQSKPKPSSSLSSEPPPLEPQPKPQTSQSKPKPSS 577

Query: 140 P-NSSQREPLQPWPSRQGSSQLPGPSQPNSSQREPLQPWPSRQGSSQLQVPKPPLNQRQH 199
             +SS+  PL+P P+ Q S   P  S+P   Q +P QP P++  SS+ Q P+    Q+Q 
Sbjct: 578 SLSSSEPPPLEPQPT-QSSKPQPSQSKPQPIQSQPTQPQPTQPKSSK-QQPQSKQQQQQQ 637

Query: 200 KRRANDILTANRQEPAIMKERRQRTKA 215
           +++        +Q+    K + +++K+
Sbjct: 638 QQQQQQQQQQQQQQQQQQKSKPEQSKS 661

[Close]

BLAST of Sed0003953 vs. ExPASy TrEMBL
Match: A0A1S3AZB1 (protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.5e-52
Identity = 153/358 (42.74%), Postives = 197/358 (55.03%), Query Frame = 0


Query: 17  NLELSLAPPSSSSSPPHHKPKQSKSVKFPSICHQEPPNIPELAPLQLSLSQEPLQPGPLL 76
           NL+LSL PP  S  PP  +   +    F S     PP++  L  L LSL      P P  
Sbjct: 11  NLQLSLRPPFQSPPPPSPQSLFTLHSSFQS----PPPSLQSLQSL-LSLRLPTQSPTP-- 70

Query: 77  GPSQPNSPQRGPLLQPWPSRQGSLQL---PGPSQPEPLQPWPFRQESLQLPGPSQPNSSQ 136
            P+Q +  Q    LQP PS      L   P P  P P    P     L L  P  P S  
Sbjct: 71  -PTQSSLSQH-LSLQPPPSPPHERLLCVSPQPPHPPPPPEHPL-SFHLLLESPPPPPSPA 130

Query: 137 REPLQPWPSRQGSSQLPGPSQPNSSQREPLQPWPSRQGSSQLQVPKPPLNQRQHKRRAND 196
             P          S LP P Q      + LQP P++Q  +Q Q P+ P  +RQ       
Sbjct: 131 EFP----------SSLPLPLQSPPLPFDYLQPPPTQQ--TQNQPPEIPKPKRQ------- 190

Query: 197 ILTANRQEPAIMKERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVEC 256
                 Q P I K +R+RT+AD+  I+PPYPWST + A IH +EYL +NNI+ I GEV+C
Sbjct: 191 ---TQNQPPEIPKPKRRRTQADNSRIEPPYPWSTEKGAVIHKLEYLEANNILTIKGEVKC 250

Query: 257 NQCKEKYEMEYDLVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVI 316
            +C  K E+EY+L+SKF+EI RFI R  ++ ++RAP  W  P+ LNC  CN++ CVE +I
Sbjct: 251 KRCDRKDEIEYELISKFDEIRRFIEREKDNMHDRAPDRWVNPILLNCNFCNKEECVEPII 310

Query: 317 PKSDFETINWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
            +++   INWLFL LG  LG L+  QLK FCT+TN HRTGAKDRL+YLTY+ L KQL+
Sbjct: 311 SEAN-SNINWLFLLLGNFLGCLKLSQLKYFCTQTNIHRTGAKDRLIYLTYLALCKQLQ 335

[Close]

BLAST of Sed0003953 vs. ExPASy TrEMBL
Match: A0A6J1C690 (probable serine/threonine-protein kinase samkC OS=Momordica charantia OX=3673 GN=LOC111007769 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.0e-50
Identity = 126/298 (42.28%), Postives = 177/298 (59.40%), Query Frame = 0


Query: 78  PSQPNSPQRGPLLQPWPSRQGSLQLPGPSQPEPLQPWPFRQESLQLPGPSQPNSSQREPL 137
           P +   P +   L   PS + +     PS P PL   P + +SLQL         Q +PL
Sbjct: 76  PLENKVPPQQFYLHSLPSEESTSTPISPSDPHPLSSQP-QPQSLQL---------QPQPL 135

Query: 138 QPWPSRQGSSQLPGPSQPNSSQREPLQPWPSRQGSSQLQVPKPPLNQRQHKRRANDILTA 197
           QP P  Q    +P PS  + +  + L+P   R+ S +     P  ++++           
Sbjct: 136 QPQP--QPEPPIPHPSTSSCNTSQSLKPSRKRRSSQESPSTHPSSSEQR----------- 195

Query: 198 NRQEPAIMKERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCK 257
            +Q+P I   RR R K  D  I+PPYPWST  RA +H ++YL+ N I+ ITG+V+C+QC+
Sbjct: 196 -QQKPNI--SRRPRIKPKDTAIEPPYPWSTANRAVVHDLKYLQQNQILTITGDVKCSQCQ 255

Query: 258 EKYEMEYDLVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIP--- 317
           ++Y++EYDLV+KF+EIA FI +N +  ++RAPSSW  P   NC+ C Q++C+  VIP   
Sbjct: 256 KQYKIEYDLVTKFDEIASFIEKNKDTLHDRAPSSWTNPNLPNCKFCGQESCMRPVIPPED 315

Query: 318 -KSDFETINWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
              D++ INWLFL LGQM+G L    LK FCT TNNHRT AKDRL+YLTY++L KQL+
Sbjct: 316 EDDDYKNINWLFLLLGQMIGCLGLKHLKYFCTYTNNHRTAAKDRLVYLTYLSLCKQLQ 347

[Close]

BLAST of Sed0003953 vs. ExPASy TrEMBL
Match: A0A6J1I8I0 (uncharacterized protein KIAA0754-like OS=Cucurbita maxima OX=3661 GN=LOC111470967 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.9e-50
Identity = 94/170 (55.29%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 206 KERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYD 265
           + RR RT+AD R I+PPYPWS  +RA IH +EYL+SNNIV I G+V C +C+  YE+EY+
Sbjct: 428 RRRRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVMIKGDVRCKKCERYYEIEYN 487

Query: 266 LVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSD----FETI 325
           L++KF+EIARFI R  ++ ++RAP  W  P+  NC  C ++NCVE +IP  +    F  I
Sbjct: 488 LMNKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFRRI 547

Query: 326 NWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
           NWLFL LGQ++G L+  QLK FC  T NHRTGAKDRL++LTY+ L KQL+
Sbjct: 548 NWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQ 597

[Close]

BLAST of Sed0003953 vs. ExPASy TrEMBL
Match: A0A6J1GM83 (mucin-16-like OS=Cucurbita moschata OX=3662 GN=LOC111455541 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-49
Identity = 94/170 (55.29%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 206 KERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYD 265
           + RR RT+AD R I+PPYPWS  +RA IH +EYL+SNNIV I G+V C +C+  YE+EY+
Sbjct: 434 RRRRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYN 493

Query: 266 LVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSD----FETI 325
           L++KF+EIARFI R  ++ ++RAP  W  P+  NC  C ++NCVE +IP  +    F  I
Sbjct: 494 LMNKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRI 553

Query: 326 NWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
           NWLFL LGQ++G L+  QLK FC  T NHRTGAKDRL++LTY+ L KQL+
Sbjct: 554 NWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQ 603

[Close]

BLAST of Sed0003953 vs. ExPASy TrEMBL
Match: A0A6J1C462 (uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007768 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-47
Identity = 109/270 (40.37%), Postives = 160/270 (59.26%), Query Frame = 0


Query: 115 PFRQESLQLPGPSQPNSSQREPLQPWPSRQGSSQLPGPSQP-----------NSSQREPL 174
           PF   +L +    +P S+          +Q    LP P +P           +++  + +
Sbjct: 5   PFNSHNLDVELSLRPPSAVDYSAAELIMQQEEVSLPPPLEPQPETLDLSTPLSTTTNQIM 64

Query: 175 QPWPSRQGSSQLQVPKPPLNQRQHKRRANDILTANRQEPA--IMKERRQRTKADDREIDP 234
               S + S  L+V +P    R   R          +EPA  ++++RR R +  +  I P
Sbjct: 65  HSSTSSRNSQSLRVRRPRARARVRVRARASPSPRRAREPASPVVRQRRSRVELKNTPIKP 124

Query: 235 PYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYDLVSKFEEIARFIARNG 294
           PYPWST  +A +H + YLR N I+ ITG+V C++C+++Y +EYDL++KFEEIA FI +N 
Sbjct: 125 PYPWSTEHQAVVHDLNYLRENQILTITGDVRCDRCEKQYTIEYDLMTKFEEIASFIEKNK 184

Query: 295 EDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSDFETINWLFLFLGQMLGNLRHDQLK 354
              ++RAP SW  P  L+C++C ++NCV   IP+ D + INWLFL LGQM+G L+ + LK
Sbjct: 185 ATLHDRAPESWTNPNFLDCKLCGEENCVRPTIPEGDNKNINWLFLLLGQMIGRLKLEHLK 244

Query: 355 KFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
            FC  TNNHRTGAK+RL+YLTY+TL KQL+
Sbjct: 245 YFCAYTNNHRTGAKNRLVYLTYLTLCKQLQ 274

[Close]

BLAST of Sed0003953 vs. TAIR 10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 145.6 bits (366), Expect = 8.0e-35
Identity = 106/279 (37.99%), Postives = 143/279 (51.25%), Query Frame = 0


Query: 115 PFRQES----LQLPGPSQPNSSQREPLQP---WPSRQGSSQLPGPSQ--------PNSSQ 174
           P RQE     +QL     P ++Q  P QP        G++ +  P+Q        PN S 
Sbjct: 29  PQRQEEQGEVMQLLTSDPPQNTQPSPPQPNDMTSFANGTNHVIVPTQALEQAVPPPNVSV 88

Query: 175 REPLQPWPSRQGSSQLQVPKPPLNQ--------RQHKRRANDILTANRQEPAIMKERRQR 234
           R PL   PS +      +P P LNQ         +  R        N + P    ER   
Sbjct: 89  RTPLPYQPSEE-----VLPPPQLNQVATVALATPRRGRPPGGQARRNSKRPVAGVER--- 148

Query: 235 TKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYDLVSKFE 294
               DREI PPYPW+T +  KI +   L SNNI  I+G+V C  C     +EY+L  KF 
Sbjct: 149 -NVGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFS 208

Query: 295 EIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSDFETINWLFLFLGQM 354
           E+  +I  N E+  +RAP SW+TP  + CR C  +  ++ V+ +   E INWLFL LGQM
Sbjct: 209 ELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSE--MKPVMSERK-EEINWLFLLLGQM 268

Query: 355 LGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQL 371
           LG    DQL+ FC   + HRTG+KDR++Y+TY++L KQL
Sbjct: 269 LGCCTLDQLRYFCQLNSKHRTGSKDRVVYITYLSLCKQL 295

[Close]

BLAST of Sed0003953 vs. TAIR 10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 142.1 bits (357), Expect = 8.9e-34
Identity = 101/293 (34.47%), Postives = 140/293 (47.78%), Query Frame = 0


Query: 99  SLQLPGPSQPEPLQPWPFRQESLQLPGPSQPNSSQREPLQPWPSRQG----SSQLPGPSQ 158
           SL L   S    ++P       ++ P P  P      P+  WP+        S +P P  
Sbjct: 47  SLTLGSTSYSSQIRP-------VKSPVPIAPPPEFPGPVTTWPTPADFLATRSMVPDPPP 106

Query: 159 P---------NSSQREPLQPW-------PSRQGSSQLQVPKPPLNQRQHKRRANDILTAN 218
           P         N  Q+ P  P        PS        +  PP+     KR     +   
Sbjct: 107 PSHQIPLWMSNYFQQTPNPPQLVTHFFPPSGLAPPSSNLTPPPV-----KRPVTGSVRIY 166

Query: 219 RQEPAIMKERRQRTKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKE 278
           R    + K      K+D   I PP+PW+TNRR +I ++EYL SN I  ITGEV+C  C++
Sbjct: 167 RSRSTVSK------KSD--TISPPFPWATNRRGEIQSLEYLESNQITTITGEVQCRHCEK 226

Query: 279 KYEMEYDLVSKFEEIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSDF 338
            Y++ Y+L  +F E+ +F         +RA   WA P    C +C ++  V+ VI +   
Sbjct: 227 VYQVSYNLRERFAEVVKFYLTEKRKMRDRAHKDWAYPEQRRCELCGREKAVKPVIAERKS 286

Query: 339 ETINWLFLFLGQMLGNLRHDQLKKFCTETNNHRTGAKDRLLYLTYITLYKQLK 372
           + INWLFL LGQ LG    +QLK FC  + NHRTGAKDR+LYLTY+ L K L+
Sbjct: 287 Q-INWLFLLLGQTLGFCTLEQLKNFCKHSKNHRTGAKDRVLYLTYMGLCKMLQ 318

[Close]

BLAST of Sed0003953 vs. TAIR 10
Match: AT2G16190.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 6.4e-24
Identity = 90/249 (36.14%), Postives = 119/249 (47.79%), Query Frame = 0


Query: 115 PFRQES----LQLPGPSQPNSSQREPLQP---WPSRQGSSQLPGPSQ--------PNSSQ 174
           P RQE     +QL     P ++Q  P QP        G++ +  P+Q        PN S 
Sbjct: 29  PQRQEEQGEVMQLLTSDPPQNTQPSPPQPNDMTSFANGTNHVIVPTQALEQAVPPPNVSV 88

Query: 175 REPLQPWPSRQGSSQLQVPKPPLNQ--------RQHKRRANDILTANRQEPAIMKERRQR 234
           R PL   PS +      +P P LNQ         +  R        N + P    ER   
Sbjct: 89  RTPLPYQPSEE-----VLPPPQLNQVATVALATPRRGRPPGGQARRNSKRPVAGVER--- 148

Query: 235 TKADDREIDPPYPWSTNRRAKIHTMEYLRSNNIVRITGEVECNQCKEKYEMEYDLVSKFE 294
               DREI PPYPW+T +  KI +   L SNNI  I+G+V C  C     +EY+L  KF 
Sbjct: 149 -NVGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFS 208

Query: 295 EIARFIARNGEDCNNRAPSSWATPVALNCRMCNQQNCVEAVIPKSDFETINWLFLFLGQM 341
           E+  +I  N E+  +RAP SW+TP  + CR C  +  ++ V+ +   E INWLFL LGQM
Sbjct: 209 ELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSE--MKPVMSERK-EEINWLFLLLGQM 265

The following BLAST results are available for this feature:

BLAST of Sed0003953 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439384.1	2.0e-51	42.74	PREDICTED: protein PAF1 homolog [Cucumis melo]	[more]
XP_038895979.1	2.2e-50	46.30	junction-mediating and -regulatory protein-like [Benincasa hispida]	[more]
XP_022135938.1	8.3e-50	42.28	probable serine/threonine-protein kinase samkC [Momordica charantia]	[more]
XP_022972400.1	1.8e-49	55.29	uncharacterized protein KIAA0754-like [Cucurbita maxima]	[more]
KAG7011696.1	1.8e-49	55.29	hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Sed0003953 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55CW2	1.1e-04	30.43	Probable serine/threonine-protein kinase samkC OS=Dictyostelium discoideum OX=44...	[more]

BLAST of Sed0003953 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZB1	9.5e-52	42.74	protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1	[more]
A0A6J1C690	4.0e-50	42.28	probable serine/threonine-protein kinase samkC OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1I8I0	8.9e-50	55.29	uncharacterized protein KIAA0754-like OS=Cucurbita maxima OX=3661 GN=LOC11147096...	[more]
A0A6J1GM83	1.2e-49	55.29	mucin-16-like OS=Cucurbita moschata OX=3662 GN=LOC111455541 PE=4 SV=1	[more]
A0A6J1C462	1.9e-47	40.37	uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Sed0003953 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16190.1	8.0e-35	37.99	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein fam...	[more]
AT1G49330.1	8.9e-34	34.47	hydroxyproline-rich glycoprotein family protein	[more]
AT2G16190.2	6.4e-24	36.14	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..223
None	No IPR available	PANTHER	PTHR34272	EXPRESSED PROTEIN	coord: 128..371

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003953.1	Sed0003953.1	mRNA