Sed0003946 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACTACAATCCGATCGGGATCGACGCAGTCTCCACCATGAGCAGCCTTGAAGCTAAAGACAATCCTTATGTTCAGTTTTCATCTGCTTCTGCATCTCCAAATGGGAAAAGTTTGCTTTCTTTTGCTTTGCTCTTAATGTGTTTGTAAAAATGCCTCTGTGAATACTGATGACCTTTTTTTCTATTTTGTTGCCAATGTTTATTAGATAAGACGTGGGAAGTGTTGGATCGGTGCGGGAAGAGGTTTGAAAATAGCACCATGAGCATTAAAGCTGCTGCAGATAACGTCTGGAATCATTGTCAGTTCTTTGATCTATCCTTAATTCAATTTACTTTTCTGAATCTGTTGTGTTGGTTTCACCTAGAATCTAATAACAACCCATTGCTTCATTTTGATACTGTAGTAAGATTTAGTTCTCTCATCTCTTTAATTTGATTGGTAAACCTTTCAATGAATATGTTCAAGTTTCGTGATAATACGGAATTCCATCTCAAAATTAATTGGCAATGAATGGAATAGTTTATTTATCTTATAAATTCTAGGGGGTTTTCTTACTTTTACTTTTCTCATGTTGGATCTTCAATATGTCCCCTCAAAATTGCGTTTCTTTGGGTTTATTAATCTTGAACTGGATCTTAATTTTACTTTTATTGAATTGAATACTCATTTAAGTTTAATGGGTTTTCATAAAATATTTGATAATATGGACTTCCATCTCAAAACCAAGTCCATTTATTTTATAAATGCCATGAAGTCTCCTCACTTTTCTAACATCGGATCTCAACGTTACCTAAGTAAAGAATTGGTTTATTTCAAAAGAAAAGTGAATTTTAGTTATCTTCTTGTTAATTTGATTGGTAGAGCTTTCAATCAAATTGGTTCCAAAGAATTAAAAAGAGTTTATGTTAAGACACTGCTAACACTAAAATACACCATATAACTATATTACGATATAATAGATGTTACAATGTCAATGGTCTTTCGAGAGGGTTATGTCTCTCCCAAAGTCTCTACCTAAGATAATATAATACCAAAACATTCTCTACTCTCTAAGAATCCTAACTCTCCTATTTAACTAACTAAGACACTCATTTCTAATCTACTATGACCTTATCAATATTATACTAAAATTCCCAACCTAGCCCTTCTCAGTACTCAACAGCTTCTTTCGGTAAAGAATTGGTTCGGATTTCCCTTCATGTTGTCTGATTATTTCAAACAATTAATGATAACTTCAAATATCAAATGACATGTCACAAGTGAAAACAAAACCAACTTTATTGCGCAAGGGTATGCTTCATTCCTTTTGGTCCTTTATAGAGCAATGAAATTGGGACAACCTAAGCATAGCTGAATTGATTAAGAAAAATATACACTCGACCTTGAATTTCAACCCAACATATTGTTGAATTAGAAAAAAAGAATAATGAACCCTGAATTTTTGTTCATGATTGATGTCTTCTCGGGCATATTAGCTTCTAAACTACAACAAATTTCTTCTCAACAGTGAAACTTAGTTCTAGTGTCACCGATGCGGCCATGGTGAGGCTTTGTCGAGGGACGAAGTTGCTCACGGAAGGTGGCTACGAAGAAGTGTTTCAGCAGACGTTTGGTTTTGTTGATGGAGACAAATACTTAGATTCCTTTGCTTGCTATCTGAGCACTTCCTCTGGGCCTGTAAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTCTATAGTGAGTTTCCTCTTTGTCACTATCCTTCTCCTGGCCAGCCACAGTGGATTCATTACAAGGTATGCCTCACCCATTACTCTTGAAAATATTTTTTCTGATGTATCTGAAATAGAGTTAGGATATAGACATTAGTTTGGCAACCTTTTTTTTAATGCTTTGAAAATTAAGCTTATAAACATTACTTCCACCTTGCTTTATTATCTGTTTAAACTTTAAAGCATTTTTCAGAACTTGATTTTTGTTTTTGAAACGTGACTAAAAATTCAAGGGTCTTCTAAAGTGAAAAACCTTACCAAAACATTGTGAGAACAAACATAATTTCAAAACTAAAAAAAATAGTTATCAAACAAAACTTGTTTACTTGTAAACAATCGATAGAGTTCCTACGAGTTATGAGTTCAATCCATAGTGTAACCATTTACTCAAGAATTAATTTCCTACAGGTTTCCCGTAGGGTCAAATGATTTGTTTCATAAGAATAGTCGAAGTGCGCGTAAGCTGGTCCTACACTCCAAGATACAAAAAAAGCAATCAATAGAGTAGATATATTGAAGGAAATACAAAACAGAAAGAATACAAGATCACTCATGTGTTTGAGATTCCCCACAAAAAGATGCTACTGGGTTAACTCTCACTGTTCACATCCCCACAAAAAGATGCTACTGGGTTAACTCTCTCTATTCCCATCCCCACTTACATATACTTCTCTGATCTAACTAATAATGAGGGTCCTGCTTCCTTCACTTCCAGAAGTTTTTTTTTTTTTTTGCGAGTATTCAAACCAGTTTGAGCACACGTTGAAGTCTCCCGAAACAACTGTCTGACTTTACTATATTTGGTTGTCAAACTATATTGAATCCTAGCTGTAGCCACCAGTACCATAGGTTGGACTCAGCTCTTTATTATTTGCATAGCCTTTGTTGACCACTATGCCAACTCATTGTGGTTCCAAAAGATATTATATTTTTTCCCTCTAACTTCCTCTTGTATTTCCCGCCCTTTCATATTTGAATATGCGATATGCTTAGGTGGCCTCTTTGAGTGTACTAGCAGCTACCCTGCGTTTTTATCTTAGTTTACAATGAAGAGATAGTTATTAACTGGTTCGTTGCCAAGTTATGTCTATAGAATTGTTCTCTGAACTTGCTTTAGTATGAATATCTTTTTATGTTCTTCACAATTTTGGATAGTATGATTATTTTTATGTGGTTCATTCTCTTGTTTTTTCCATACGAAAAGTTTTGTTTCCTATAAAAATTGACGTATGTGACCCCCCGAGCGAACCAGGTCCACATTGGAATGAGAGAGCTTAAAAGATATGATTTACACTACCTATATCAACAAGATGCACCTCCTTTTTCGGTGGCTCAATCCAAGGAACTTCATAGCTAAGCGTGCTTAGCTTGGAGTAGTCTTGGGTTGGGTAATCTCCTATGAGTTTATTCCTAGAATGCACGTGAGTGAGGACAAAATATGTTGAAAGGACCCGTGTTGGTTTGTGGGGACAGTTTTCATTCTTAAAAGCATTAACATGGTCAGATTGCAAAGGGACGCAAGGGAAGAATGCCCGTGCCAATAGGGTTGCGCTCATAGGAGCAAATCTGGATTCTAAATCCTGGTCCAAATCTTGGGCCTGGGGCGTTATTTTCCCCGAGGGGTAGCACGGTGGCCGGTTTTGTAGGCTTCGATTTTGAAGGTATACTCCTTTCAAGTTCTAGACTTACTTATGACATTAATTTGTAGACACCTCTCGTGTCTCCATTCCTTCAATATCACCCGGTGCCTGGCCAAGGGACGAACGTGGTTACCCCGATATAGTGGAGCGAAACTCCAATTTTTCAGTTTCCAAAAAAATAATAATAATAATAATAATTGAAGCCCAAATCCATAAACCTTCAAAAACAGCAAATTTTCAAATTCAAGAAATGTTGCCAAAAGATTTATGCACAGAAGAAAGTTGAAATCGTATGAGATAAAACTTGAAAGAGAAACATCTAGACTTATAGTTTGAACCTGGATTCAAAACCTGCGAGAATTAGTGTGTTCATGATCTTCCTCAAGAATATAACTTGGGCTTTGTTTTGTAAGGATTATGAGACTGAAAAACATAGTATATTAGGGACTAGAATTCAAATGGAATGGTATTATTCCTTCTGGTGTCTTCAGTAATCTTCCAAGCAGGCCATACTGTTCACTAAGAAGTATAATGATGAGCCCATGATTAAATACCATTTAATACACCCATTCACCCATTAAATAGGCTAACATAATTGTCCTTTCTTTGTTACCCACTATGAATTTTTCAATAAATTGGGCATCAGGGGATTAGGAAATGAAAATGTAAGGATGCAGTGCCTGATCTGCCAGTAGGATACCATTGATGGAGTGTCAGTCCACAGAAGAAACTATAAGCTGATGTGCAAGAACATGTTCTTGATTTCAAGAGTAGTAAATGAAACCATTTAAAGAGTGAGTTGAAGTCTGCAGCTTTATAAAAGCTCATCCATCAATTGAAAAGTAAGTTTAGCAAAGATTTGCGCAACTATCTCACGGCAATATTTTTAAAAGCTCAAGGTGCACTAAGACACAATAATCTACTAGAGATTAGGCACAAGGTGAAAAAATACTATGGATTTTTTTTGGTGAGGCACAAAAAGTAACTGGGGGACTTTTTTTTATGAGGCGCATTATGAAAAGAACATCCATAAAGAAGAGGTAGCATAGTTGGAGTGAAAACATTTTTAAAAACTCTAATTGGTGGGGCACCGGTTTGGTTATGATAAACGGAAGGTTATGATAGACGGTGAGTTATGATAAACGGCGAGTTATTATAAATGATGTTTGAAGGGCAAATTATTATAACATGGATTATGATAAACGGTGTTTGGGGGGCTAGTTATGTAACAAAATGTAATATATATATATATATATATATATAAGGTATAGATAAACGAGCACGCAAGTTTAGGTAACCACCATTTATAATAAACGATGAGGCAAACATCAGTTAGGTTATTATAACCAACTCAACCGTTTACATAAACAGGGGCCCAAACATACCCAAGATTCGTAAATATTATATTATTAGTTAACAAAGAGCAAAATAAATCCTTAATCCAAAAATTTTCGAGTTTAAGGTTATTAAAACTTCTCTTTTTACAATTAACCATAGAAGGCGAGCACTTTTGTACCTGAGGTCGCTAGACCTGTGCCTTAAGCCTAGGCATGCACTAGCCAAGTCGTTTAAAATATTGCTCCCCAGGCCTTAAATACTTCTCCTGCTAAAGTCAATGTTTAGAGAATCTCCTATTCCTATCATATATTTGCTTGAAAACTATGTGTGTTACTAGTTGATCTTGCATTCTATCCCCTTCTCAAATTATTGGTATTTGCATTCTTGAGTAGAACCAGCTAGAATTATTAGCGAATGAATCATCAAGTTTCGTCGAGTTTCTTGTACTAAATGATCTATCGGTTTCGCTCGTGTTTTCAACTTTGGACGTTCGGTTATTTTATTTAGCTGGGTTCTTTTTCATGACTATGATGAATATATAGGTGGTGATAGCAGTTGATCAGTGAGGAAAATCAATGCTTCTTCAAACCTTAAGGACCCCTCACAAAAATACATTCAAATAATCACGAGGGATTTTCATGAATTCTGGTTCATGGGATTCATATCATATAACACGGCTGTCAAGACTTTAACCGATGCATTGGAGCGATCTCGTGCCTAG ATGAAGAACTACAATCCGATCGGGATCGACGCAGTCTCCACCATGAGCAGCCTTGAAGCTAAAGACAATCCTTATGTTCAGTTTTCATCTGCTTCTGCATCTCCAAATGGGAAAAATAAGACGTGGGAAGTGTTGGATCGGTGCGGGAAGAGGTTTGAAAATAGCACCATGAGCATTAAAGCTGCTGCAGATAACGTCTGGAATCATTTGAAACTTAGTTCTAGTGTCACCGATGCGGCCATGGTGAGGCTTTGTCGAGGGACGAAGTTGCTCACGGAAGGTGGCTACGAAGAAGTGTTTCAGCAGACGTTTGGTTTTGTTGATGGAGACAAATACTTAGATTCCTTTGCTTGCTATCTGAGCACTTCCTCTGGGCCTGTAAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTCTATAGTGAGTTTCCTCTTTGTCACTATCCTTCTCCTGGCCAGCCACAGAAAATCAATGCTTCTTCAAACCTTAAGGACCCCTCACAAAAATACATTCAAATAATCACGAGGGATTTTCATGAATTCTGGTTCATGGGATTCATATCATATAACACGGCTGTCAAGACTTTAACCGATGCATTGGAGCGATCTCGTGCCTAG ATGAAGAACTACAATCCGATCGGGATCGACGCAGTCTCCACCATGAGCAGCCTTGAAGCTAAAGACAATCCTTATGTTCAGTTTTCATCTGCTTCTGCATCTCCAAATGGGAAAAATAAGACGTGGGAAGTGTTGGATCGGTGCGGGAAGAGGTTTGAAAATAGCACCATGAGCATTAAAGCTGCTGCAGATAACGTCTGGAATCATTTGAAACTTAGTTCTAGTGTCACCGATGCGGCCATGGTGAGGCTTTGTCGAGGGACGAAGTTGCTCACGGAAGGTGGCTACGAAGAAGTGTTTCAGCAGACGTTTGGTTTTGTTGATGGAGACAAATACTTAGATTCCTTTGCTTGCTATCTGAGCACTTCCTCTGGGCCTGTAAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTCTATAGTGAGTTTCCTCTTTGTCACTATCCTTCTCCTGGCCAGCCACAGAAAATCAATGCTTCTTCAAACCTTAAGGACCCCTCACAAAAATACATTCAAATAATCACGAGGGATTTTCATGAATTCTGGTTCATGGGATTCATATCATATAACACGGCTGTCAAGACTTTAACCGATGCATTGGAGCGATCTCGTGCCTAG MKNYNPIGIDAVSTMSSLEAKDNPYVQFSSASASPNGKNKTWEVLDRCGKRFENSTMSIKAAADNVWNHLKLSSSVTDAAMVRLCRGTKLLTEGGYEEVFQQTFGFVDGDKYLDSFACYLSTSSGPVNGTLYISTKRVAFYSEFPLCHYPSPGQPQKINASSNLKDPSQKYIQIITRDFHEFWFMGFISYNTAVKTLTDALERSRA Homology
BLAST of Sed0003946 vs. NCBI nr
Match: XP_038887655.1 (GEM-like protein 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 315.1 bits (806), Expect = 4.5e-82 Identity = 156/206 (75.73%), Postives = 173/206 (83.98%), Query Frame = 0
BLAST of Sed0003946 vs. NCBI nr
Match: XP_038887653.1 (GEM-like protein 2 isoform X1 [Benincasa hispida] >XP_038887654.1 GEM-like protein 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 311.6 bits (797), Expect = 5.0e-81 Identity = 156/207 (75.36%), Postives = 174/207 (84.06%), Query Frame = 0
BLAST of Sed0003946 vs. NCBI nr
Match: XP_008460398.1 (PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 309.3 bits (791), Expect = 2.5e-80 Identity = 155/213 (72.77%), Postives = 177/213 (83.10%), Query Frame = 0
BLAST of Sed0003946 vs. NCBI nr
Match: XP_022159858.1 (GEM-like protein 2 [Momordica charantia]) HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77 Identity = 149/203 (73.40%), Postives = 167/203 (82.27%), Query Frame = 0
BLAST of Sed0003946 vs. NCBI nr
Match: XP_008460396.1 (PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 294.7 bits (753), Expect = 6.4e-76 Identity = 155/243 (63.79%), Postives = 178/243 (73.25%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.4e-41 Identity = 88/201 (43.78%), Postives = 127/201 (63.18%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.5e-38 Identity = 87/210 (41.43%), Postives = 129/210 (61.43%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.1e-37 Identity = 85/204 (41.67%), Postives = 123/204 (60.29%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 148.7 bits (374), Expect = 7.4e-35 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23 Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy TrEMBL
Match: A0A1S3CCD7 (GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80 Identity = 155/213 (72.77%), Postives = 177/213 (83.10%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy TrEMBL
Match: A0A6J1E018 (GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.6e-78 Identity = 149/203 (73.40%), Postives = 167/203 (82.27%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy TrEMBL
Match: A0A1S3CCH4 (GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 3.1e-76 Identity = 155/243 (63.79%), Postives = 178/243 (73.25%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy TrEMBL
Match: A0A1S3CCV4 (GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 1.0e-71 Identity = 137/181 (75.69%), Postives = 152/181 (83.98%), Query Frame = 0
BLAST of Sed0003946 vs. ExPASy TrEMBL
Match: A0A067K7X8 (GRAM domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_14146 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 3.1e-52 Identity = 105/205 (51.22%), Postives = 146/205 (71.22%), Query Frame = 0
BLAST of Sed0003946 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42 Identity = 88/201 (43.78%), Postives = 127/201 (63.18%), Query Frame = 0
BLAST of Sed0003946 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 160.2 bits (404), Expect = 1.7e-39 Identity = 87/210 (41.43%), Postives = 129/210 (61.43%), Query Frame = 0
BLAST of Sed0003946 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 159.8 bits (403), Expect = 2.3e-39 Identity = 86/201 (42.79%), Postives = 124/201 (61.69%), Query Frame = 0
BLAST of Sed0003946 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38 Identity = 85/204 (41.67%), Postives = 123/204 (60.29%), Query Frame = 0
BLAST of Sed0003946 vs. TAIR 10
Match: AT4G40100.1 (GRAM domain family protein ) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-31 Identity = 79/197 (40.10%), Postives = 110/197 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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