Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAAACTTCCAAAATATGCCGCACTCAAATCAAAGTACAATCACAAGTACTTGCGTTACCTAAATCAAACATGTTCACCCATCCACACATTTCTTCAATATTCTTCAGATGAGATTCTTACTCCATTTACAAAGTTCGAGTTCGAACAAGCTGCAAGTGACCCATGTTTATACCATATCAAATGTTGTTACAATAACAAATACTGGTCTAGTTTGGCCTCTGACCATCACTTCATAGTTGCAAGTGCAGACATAAAACAAGAAGACAAATCCAAGTGGAATTGCACATTATTCCAACCTGTTTTTGACACTTGCAATCAATCATATCGATTTTGTCATGTCAAACTCGGTTTAAATGTTGTCTTATGGAGAGCTGATCCCCCTTATAATGAAGTTTTACGAGCTCAAAGGTCGGAACCCAATAAAGATCATAGTGATTTAAACATAGTTATCAATTGGGATTCACTGTTTATGTTACCTAAATATGTTGCTTTTAAAGGTGATAATGGTTGTTATCTTAGTGCCCGCTTGATCAACCGTCGTCAACATCTACAATTTTCATCCAATAGTATTGAAGATGGTACCGTTTGGATGGAGACATTTACAACAAACGATGGAAACGTTCGCATCAAATCTATTCACTTTAATTGTTTATGGAAACGGTGTACCTTTAATTGGATTCTTGCTAACGCTTGTCCCAATAGTCCTGAAATTCTTGATACTCTTTTTTCACCAACTAAACTTAGCCCAAATGTTATTGCTTTGTGCAATTTGGGTAACAGAAACTTTGTTAAAAGATTCACTATTGGTGATGAAATAAATCTTCTAAATGCTTTAGTAAAAAACTTGATGCGTTTTCACATTTAGAGATGATAGAACTAGTTCGTTCGAGGAAAATCCACAACGTGAAATTTCACACTGCTTCAGCCAAAATCTTTGAAGGGGTTAGCATTGGATCAAACAGAGAAGTTGTAACAAACAATACAAACTATTCCAAGACTGTACAGTTGAGTTTTCCACACAAAAATGATGTATTTAGTACCTGGAACTCTTCGTGTACGACCAAGTTAGGCGTGAAGACAATACTCGAATCTGAGATTGCTGTGATTGGTGATTGTGATAAGATTGAGATTTTACCAACAAAGTTTAGTGGAG
mRNA sequence
ATGTCGAAACTTCCAAAATATGCCGCACTCAAATCAAAGTACAATCACAAGTACTTGCGTTACCTAAATCAAACATGTTCACCCATCCACACATTTCTTCAATATTCTTCAGATGAGATTCTTACTCCATTTACAAAGTTCGAGTTCGAACAAGCTGCAAGTGACCCATGTTTATACCATATCAAATGTTGTTACAATAACAAATACTGGTCTAGTTTGGCCTCTGACCATCACTTCATAGTTGCAAGTGCAGACATAAAACAAGAAGACAAATCCAAGTGGAATTGCACATTATTCCAACCTGTTTTTGACACTTGCAATCAATCATATCGATTTTGTCATGTCAAACTCGGTTTAAATGTTGTCTTATGGAGAGCTGATCCCCCTTATAATGAAGTTTTACGAGCTCAAAGGTCGGAACCCAATAAAGATCATAGTGATTTAAACATAGTTATCAATTGGGATTCACTGTTTATGTTACCTAAATATGTTGCTTTTAAAGGTGATAATGGTTGTTATCTTAGTGCCCGCTTGATCAACCGTCGTCAACATCTACAATTTTCATCCAATAGTATTGAAGATGGTACCGTTTGGATGGAGACATTTACAACAAACGATGGAAACGTTCGCATCAAATCTATTCACTTTAATTGTTTATGGAAACGGTGTACCTTTAATTGGATTCTTGCTAACGCTTGTCCCAATAGTCCTGAAATTCTTGATACTCTTTTTTCACCAACTAAACTTAGCCCAAATGTTATTGCTTTGTGCAATTTGGGTAACAGAAACTTTGTTAAAAGATTCACTATTGGTGATGAAATAAATCTTCTAAATGCTTTAGTAAAAAACTTGATGCGTTTTCACATTTAGAGATGATAGAACTAGTTCGTTCGAGGAAAATCCACAACGTGAAATTTCACACTGCTTCAGCCAAAATCTTTGAAGGGGTTAGCATTGGATCAAACAGAGAAGTTGTAACAAACAATACAAACTATTCCAAGACTGTACAGTTGAGTTTTCCACACAAAAATGATGTATTTAGTACCTGGAACTCTTCGTGTACGACCAAGTTAGGCGTGAAGACAATACTCGAATCTGAGATTGCTGTGATTGGTGATTGTGATAAGATTGAGATTTTACCAACAAAGTTTAGTGGAG
Coding sequence (CDS)
ATGTCGAAACTTCCAAAATATGCCGCACTCAAATCAAAGTACAATCACAAGTACTTGCGTTACCTAAATCAAACATGTTCACCCATCCACACATTTCTTCAATATTCTTCAGATGAGATTCTTACTCCATTTACAAAGTTCGAGTTCGAACAAGCTGCAAGTGACCCATGTTTATACCATATCAAATGTTGTTACAATAACAAATACTGGTCTAGTTTGGCCTCTGACCATCACTTCATAGTTGCAAGTGCAGACATAAAACAAGAAGACAAATCCAAGTGGAATTGCACATTATTCCAACCTGTTTTTGACACTTGCAATCAATCATATCGATTTTGTCATGTCAAACTCGGTTTAAATGTTGTCTTATGGAGAGCTGATCCCCCTTATAATGAAGTTTTACGAGCTCAAAGGTCGGAACCCAATAAAGATCATAGTGATTTAAACATAGTTATCAATTGGGATTCACTGTTTATGTTACCTAAATATGTTGCTTTTAAAGGTGATAATGGTTGTTATCTTAGTGCCCGCTTGATCAACCGTCGTCAACATCTACAATTTTCATCCAATAGTATTGAAGATGGTACCGTTTGGATGGAGACATTTACAACAAACGATGGAAACGTTCGCATCAAATCTATTCACTTTAATTGTTTATGGAAACGGTGTACCTTTAATTGGATTCTTGCTAACGCTTGTCCCAATAGTCCTGAAATTCTTGATACTCTTTTTTCACCAACTAAACTTAGCCCAAATGTTATTGCTTTGTGCAATTTGGGTAACAGAAACTTTGTTAAAAGATTCACTATTGGTGATGAAATAAATCTTCTAAATGCTTTAGTAAAAAACTTGATGCGTTTTCACATTTAG
Protein sequence
MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYHIKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLNVVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLINRRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEILDTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRFHI
Homology
BLAST of Sed0003936 vs. NCBI nr
Match:
KAG6592983.1 (hypothetical protein SDJN03_12459, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 411.0 bits (1055), Expect = 8.5e-111
Identity = 188/287 (65.51%), Postives = 228/287 (79.44%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LPK A LKSKYNH YLR++N+ CSP+ TF+QYS EIL+PFT+FEFEQA DP LYH
Sbjct: 1 MVQLPKSAVLKSKYNHNYLRFVNEACSPVRTFMQYSGKEILSPFTQFEFEQAKCDPSLYH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW SLA DHHFIVA AD K EDKSKW CTLF+PV+D+C+QS+RFCHV LGLN
Sbjct: 61 IKCCYNNKYWVSLARDHHFIVAGADQKDEDKSKWTCTLFRPVYDSCHQSFRFCHVHLGLN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWR PY E LRAQ S P+KD DL+IVI+W SL+ LPK++AF+GDNG YLSAR I+
Sbjct: 121 VVLWRVGAPYGECLRAQWSVPDKDLCDLSIVIDWGSLWSLPKFIAFRGDNGSYLSARSID 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
+LQFSSN+I+D TV METF TNDG +R+KS HF W+R T NWI A++C + + L
Sbjct: 181 NHSYLQFSSNNIDDPTVQMETFITNDGKIRVKSAHFQKFWRRGTSNWIFADSCETTVQNL 240
Query: 241 DTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRF 288
DTLFSPTKL+P+++AL NLGN NFVKR+T +++ L A VKN+ F
Sbjct: 241 DTLFSPTKLAPHIVALRNLGNNNFVKRYTSASKVSCLMAGVKNIDEF 287
BLAST of Sed0003936 vs. NCBI nr
Match:
XP_023514586.1 (uncharacterized protein LOC111778837 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 407.9 bits (1047), Expect = 7.2e-110
Identity = 186/287 (64.81%), Postives = 228/287 (79.44%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LPK A LKSKYNH YLR++N+ CSP+ TF+QYS EIL+PFT+FEFEQA DP LYH
Sbjct: 1 MVQLPKSAVLKSKYNHNYLRFVNEACSPVRTFMQYSGKEILSPFTQFEFEQAKCDPSLYH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW SLA DHHFIVA AD K EDKSKW CTLF+PV+D+C+QS+RFCHV LGLN
Sbjct: 61 IKCCYNNKYWVSLARDHHFIVAGADQKDEDKSKWTCTLFRPVYDSCHQSFRFCHVHLGLN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWR PPY E LRAQ S P+KD DL++VI+ +SL+ LPK++AF+GDNG YLSAR I+
Sbjct: 121 VVLWRVGPPYGECLRAQWSVPDKDLCDLSVVIDSESLWSLPKFIAFRGDNGSYLSARSID 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
+LQFSSN+I+D TV METF TNDG +R+KS HF W+R T NWI A++C + + L
Sbjct: 181 NHSYLQFSSNNIDDPTVQMETFITNDGKIRVKSAHFQKFWRRDTSNWIFADSCETTAQNL 240
Query: 241 DTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRF 288
DTLFSPTKL+ +++AL NLGN NFVKR+T +++ L A VKN+ F
Sbjct: 241 DTLFSPTKLASHIVALRNLGNNNFVKRYTSASKVSCLMAAVKNIDEF 287
BLAST of Sed0003936 vs. NCBI nr
Match:
XP_022960406.1 (uncharacterized protein LOC111461141 [Cucurbita moschata])
HSP 1 Score: 399.1 bits (1024), Expect = 3.4e-107
Identity = 184/287 (64.11%), Postives = 228/287 (79.44%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LP++AALKSKYN YLRY+N+TCSP+ +FLQYS +ILTPFTKFEFEQA DP L+H
Sbjct: 1 MVQLPRFAALKSKYNDNYLRYINETCSPVRSFLQYSGKDILTPFTKFEFEQARCDPSLFH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW S A DHHFIVA AD K+ED+ KW CTLF+PV+++C+QSYRFCHV+LG N
Sbjct: 61 IKCCYNNKYWVSWACDHHFIVAGADHKEEDRYKWTCTLFRPVYESCHQSYRFCHVRLGFN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWR PP+ E LRAQ S+P++D DL+IVIN +S++ LPKY+AFK DNG YLSARLI+
Sbjct: 121 VVLWRGGPPFGECLRAQWSDPDRDLCDLSIVINRESIWSLPKYIAFKSDNGSYLSARLIS 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
+ +LQFSS SI+D ++ METF TNDG +RIKSI F WKR T NWI A++ +S E L
Sbjct: 181 QLPYLQFSSKSIDDPSIQMETFITNDGKIRIKSIFFQKFWKRGTSNWIFADSTDDSSENL 240
Query: 241 DTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRF 288
DTLFSPT++S V+AL NLGN NFVKR+++ + N LNA K + F
Sbjct: 241 DTLFSPTQVSSTVVALRNLGNGNFVKRYSLASKANFLNAGAKEIDSF 287
BLAST of Sed0003936 vs. NCBI nr
Match:
XP_023514585.1 (uncharacterized protein LOC111778836 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-106
Identity = 182/287 (63.41%), Postives = 226/287 (78.75%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LP++AALKSKYN YL Y+N+TCSP+ FLQYS +IL+PFTKFEFEQA DP L+H
Sbjct: 1 MVQLPRFAALKSKYNDNYLGYINETCSPVRPFLQYSGKDILSPFTKFEFEQARCDPSLFH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW S A DHHFIVA AD K+ED+ KW CTLF+PV+++C+QSYRFCHV+ G N
Sbjct: 61 IKCCYNNKYWVSWACDHHFIVAGADHKEEDRYKWTCTLFRPVYESCHQSYRFCHVRRGFN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWR PP+ E LRAQ S+P++D DL+IVINW+S++ LPKY+AFK DNG YLSARLI+
Sbjct: 121 VVLWRGGPPFGECLRAQWSDPDRDLCDLSIVINWESIWSLPKYIAFKSDNGSYLSARLIS 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
+ +LQFSS SI+D ++ METF TNDG +RIKSI F WKR T NWI A++ +S E L
Sbjct: 181 QLPYLQFSSKSIDDPSIQMETFITNDGKIRIKSIFFQKFWKRGTSNWIFADSTDDSSENL 240
Query: 241 DTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRF 288
DTLFSPT++S V+AL NLGN NFVKR+++ + N LNA K + F
Sbjct: 241 DTLFSPTQVSSTVVALRNLGNGNFVKRYSLASKANFLNAGAKEIDSF 287
BLAST of Sed0003936 vs. NCBI nr
Match:
KAG6592982.1 (hypothetical protein SDJN03_12458, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 395.6 bits (1015), Expect = 3.7e-106
Identity = 182/287 (63.41%), Postives = 227/287 (79.09%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LP++AALKSKYN YLRY+N+TCSP+ +FLQYS +IL+PFTKFEFEQA DP L+H
Sbjct: 1 MVQLPRFAALKSKYNDNYLRYINETCSPVRSFLQYSGKDILSPFTKFEFEQARCDPSLFH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW S A DHHFIVA AD K+ED+ KW CTLF+PV+++C+QSYRFCHV+LG N
Sbjct: 61 IKCCYNNKYWVSWACDHHFIVAGADHKEEDRYKWTCTLFRPVYESCHQSYRFCHVRLGFN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWR PP+ E LRAQ S+P++D DL+IVIN +S++ LPKY+AFK DNG YLSARLI+
Sbjct: 121 VVLWRGGPPFGECLRAQWSDPDRDLCDLSIVINRESIWSLPKYIAFKSDNGSYLSARLIS 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
+ +LQFSS SI+D ++ METF TNDG + IKSI F WKR T NWI A++ +S E L
Sbjct: 181 QLPYLQFSSKSIDDPSIQMETFITNDGKIHIKSIFFQKFWKRGTSNWIFADSTDDSSENL 240
Query: 241 DTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRF 288
DTLFSPT++S V+AL NLGN NFVKR+++ + N LNA K + F
Sbjct: 241 DTLFSPTQVSSTVVALRNLGNGNFVKRYSLASKANFLNAGAKEIDSF 287
BLAST of Sed0003936 vs. ExPASy TrEMBL
Match:
A0A6J1H7H4 (uncharacterized protein LOC111461141 OS=Cucurbita moschata OX=3662 GN=LOC111461141 PE=4 SV=1)
HSP 1 Score: 399.1 bits (1024), Expect = 1.6e-107
Identity = 184/287 (64.11%), Postives = 228/287 (79.44%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LP++AALKSKYN YLRY+N+TCSP+ +FLQYS +ILTPFTKFEFEQA DP L+H
Sbjct: 1 MVQLPRFAALKSKYNDNYLRYINETCSPVRSFLQYSGKDILTPFTKFEFEQARCDPSLFH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW S A DHHFIVA AD K+ED+ KW CTLF+PV+++C+QSYRFCHV+LG N
Sbjct: 61 IKCCYNNKYWVSWACDHHFIVAGADHKEEDRYKWTCTLFRPVYESCHQSYRFCHVRLGFN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWR PP+ E LRAQ S+P++D DL+IVIN +S++ LPKY+AFK DNG YLSARLI+
Sbjct: 121 VVLWRGGPPFGECLRAQWSDPDRDLCDLSIVINRESIWSLPKYIAFKSDNGSYLSARLIS 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
+ +LQFSS SI+D ++ METF TNDG +RIKSI F WKR T NWI A++ +S E L
Sbjct: 181 QLPYLQFSSKSIDDPSIQMETFITNDGKIRIKSIFFQKFWKRGTSNWIFADSTDDSSENL 240
Query: 241 DTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRF 288
DTLFSPT++S V+AL NLGN NFVKR+++ + N LNA K + F
Sbjct: 241 DTLFSPTQVSSTVVALRNLGNGNFVKRYSLASKANFLNAGAKEIDSF 287
BLAST of Sed0003936 vs. ExPASy TrEMBL
Match:
A0A0A0K956 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G080920 PE=4 SV=1)
HSP 1 Score: 341.7 bits (875), Expect = 3.1e-90
Identity = 172/287 (59.93%), Postives = 208/287 (72.47%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M LPK+AALKSKYN+KYL Y+N+ S + TFL+YS DEILTPFTK EFEQA SDP YH
Sbjct: 1 MVYLPKFAALKSKYNNKYLCYVNEKSSTVRTFLRYSGDEILTPFTKLEFEQAQSDPSSYH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKY S +SDHH+IVA AD KQEDKSKW CTLF+P +D +QS++F HV LG +
Sbjct: 61 IKCCYNNKYLVSASSDHHYIVAGADQKQEDKSKWTCTLFRPAYDNYHQSFQFSHVFLGSH 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDH-SDLNIVINWDSLFMLPKYVAFKGDNGCYLS--AR 180
VVLWR+ PY E LRAQ S+P DH SDLN+VIN +SL LPK++AF GDNG YL R
Sbjct: 121 VVLWRSTAPYGECLRAQSSDPTTDHLSDLNMVINMESLISLPKFLAFTGDNGLYLREIMR 180
Query: 181 LINRRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKR-CTFNWIL----ANA 240
N HLQF S+S++D T+ METF T DGN RIKS H W+R T N+I+ N
Sbjct: 181 GNNNIPHLQFGSSSLDDSTIQMETFITKDGNTRIKSSHLGRFWRREHTSNYIVVDYSTNN 240
Query: 241 CPNSPEILDTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNA 280
N+ I+DTLFSPT++S NV+AL NLGN FVKR+ +++N L A
Sbjct: 241 NNNTQSIIDTLFSPTQISSNVVALRNLGNGKFVKRYNFANDLNFLFA 287
BLAST of Sed0003936 vs. ExPASy TrEMBL
Match:
A0A6J1D9W8 (uncharacterized protein LOC111018555 OS=Momordica charantia OX=3673 GN=LOC111018555 PE=3 SV=1)
HSP 1 Score: 340.9 bits (873), Expect = 5.3e-90
Identity = 159/285 (55.79%), Postives = 209/285 (73.33%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LP++ ALKSKYN YLRYLN+ SP+ TFLQYS D +L+P+TKF+ EQA DP L +
Sbjct: 1 MVQLPRHVALKSKYNANYLRYLNE-ASPVQTFLQYSGDTVLSPYTKFDIEQAKCDPSLVN 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
I+CCYNNKYW SL SDH++IVA AD +EDKSKWNCTLFQP++D + ++RF H+ LG N
Sbjct: 61 IRCCYNNKYWVSLPSDHNYIVAQADKTEEDKSKWNCTLFQPIYDNTHHAFRFRHIYLGFN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
+VLWR PPY + LRAQ S+P++D DL+ +I+W +L +PKY+AFKGDNGC+LS+R I
Sbjct: 121 IVLWRVGPPYGDCLRAQWSDPDRDLCDLSTIIDWGTLLSIPKYIAFKGDNGCFLSSRWIE 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
Q+ QF+SN I D T+ METF T DG++R+KS +F W+R NWI A++ S
Sbjct: 181 GHQYHQFASNDIGDPTIGMETFITKDGSIRVKSNYFGKFWRRSP-NWIWADSTDTSTNNP 240
Query: 241 DTLFSPTKL-SPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNL 285
DTLF PTK+ + NVIAL NLGN NF+KR T + + LNA + +
Sbjct: 241 DTLFWPTKVDNNNVIALRNLGNNNFIKRLTTEGKTSCLNAAINTI 283
BLAST of Sed0003936 vs. ExPASy TrEMBL
Match:
A0A6J1H7S9 (uncharacterized protein LOC111461222 OS=Cucurbita moschata OX=3662 GN=LOC111461222 PE=4 SV=1)
HSP 1 Score: 331.6 bits (849), Expect = 3.2e-87
Identity = 148/216 (68.52%), Postives = 175/216 (81.02%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M +LPK LKSKYNH YLR++N+ CSP+ TF+QYS EIL+PFT FEFEQA DP LYH
Sbjct: 1 MVQLPKSVVLKSKYNHNYLRFVNEACSPVRTFMQYSGKEILSPFTPFEFEQAKCDPSLYH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW SLA DHHFIVA AD K EDKSKW CTLF+PV+D C+QS+RFCHV LGLN
Sbjct: 61 IKCCYNNKYWVSLARDHHFIVAGADRKDEDKSKWTCTLFRPVYDNCHQSFRFCHVHLGLN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWR PPY E LRAQ S P+KD DL++VI+W SL+ LPK++AF+GDNG YL+AR I+
Sbjct: 121 VVLWRVGPPYGECLRAQWSVPDKDLCDLSVVIDWGSLWSLPKFIAFRGDNGSYLTARSID 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHF 217
+LQFSSN+I+D T+ METF TNDG +R+KS HF
Sbjct: 181 NYSYLQFSSNNIDDPTIQMETFITNDGKIRVKSAHF 216
BLAST of Sed0003936 vs. ExPASy TrEMBL
Match:
A0A6J1H8Z5 (uncharacterized protein LOC111461140 OS=Cucurbita moschata OX=3662 GN=LOC111461140 PE=4 SV=1)
HSP 1 Score: 331.6 bits (849), Expect = 3.2e-87
Identity = 160/287 (55.75%), Postives = 204/287 (71.08%), Query Frame = 0
Query: 1 MSKLPKYAALKSKYNHKYLRYLNQTCSPIHTFLQYSSDEILTPFTKFEFEQAASDPCLYH 60
M LPK+ LKSK N YLRY+N+ SPI +FL+YS EIL+PFTKFEFEQA SDP L+H
Sbjct: 1 MVGLPKFGVLKSKCNDSYLRYINEIGSPIRSFLKYSGQEILSPFTKFEFEQAKSDPSLFH 60
Query: 61 IKCCYNNKYWSSLASDHHFIVASADIKQEDKSKWNCTLFQPVFDTCNQSYRFCHVKLGLN 120
IKCCYNNKYW S A DH FI+A A+ K+ED+SKW CTLF+P++D+ QSYRF HV LGLN
Sbjct: 61 IKCCYNNKYWVSWACDHGFIIAGAEDKEEDRSKWTCTLFRPIYDSSQQSYRFQHVHLGLN 120
Query: 121 VVLWRADPPYNEVLRAQRSEPNKDHSDLNIVINWDSLFMLPKYVAFKGDNGCYLSARLIN 180
VVLWRA + + LRA S P++ DL+IVI+W+S+++LPK++ FK +NG YLS R +
Sbjct: 121 VVLWRAGSHFRDCLRAHLSTPDRHLCDLSIVIDWESMWLLPKFIVFKSENGFYLSGRRRH 180
Query: 181 RRQHLQFSSNSIEDGTVWMETFTTNDGNVRIKSIHFNCLWKRCTFNWILANACPNSPEIL 240
+LQF S S+ED ++ MET TNDG RIKSI F WKR T +WI A+ ++ +
Sbjct: 181 NLPYLQFLSQSLEDPSIMMETVFTNDGKFRIKSIFFQRFWKRGTLDWIFADLDDSNSQDP 240
Query: 241 DTLFSPTKLSPNVIALCNLGNRNFVKRFTIGDEINLLNALVKNLMRF 288
D LFSP KLSP V+AL NLG F+KR+T + LNA V + +F
Sbjct: 241 DALFSPIKLSPLVVALRNLGADKFIKRYTNFGIESGLNAAVSEIDKF 287
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6592983.1 | 8.5e-111 | 65.51 | hypothetical protein SDJN03_12459, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023514586.1 | 7.2e-110 | 64.81 | uncharacterized protein LOC111778837 [Cucurbita pepo subsp. pepo] | [more] |
XP_022960406.1 | 3.4e-107 | 64.11 | uncharacterized protein LOC111461141 [Cucurbita moschata] | [more] |
XP_023514585.1 | 1.3e-106 | 63.41 | uncharacterized protein LOC111778836 [Cucurbita pepo subsp. pepo] | [more] |
KAG6592982.1 | 3.7e-106 | 63.41 | hypothetical protein SDJN03_12458, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1H7H4 | 1.6e-107 | 64.11 | uncharacterized protein LOC111461141 OS=Cucurbita moschata OX=3662 GN=LOC1114611... | [more] |
A0A0A0K956 | 3.1e-90 | 59.93 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G080920 PE=4 SV=1 | [more] |
A0A6J1D9W8 | 5.3e-90 | 55.79 | uncharacterized protein LOC111018555 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1H7S9 | 3.2e-87 | 68.52 | uncharacterized protein LOC111461222 OS=Cucurbita moschata OX=3662 GN=LOC1114612... | [more] |
A0A6J1H8Z5 | 3.2e-87 | 55.75 | uncharacterized protein LOC111461140 OS=Cucurbita moschata OX=3662 GN=LOC1114611... | [more] |
Match Name | E-value | Identity | Description | |