Sed0003913 (gene) Chayote v1

Overview


Name	Sed0003913
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S10-1-like
Location	LG07: 13008491 .. 13010812 (+)
RNA-Seq Expression	Sed0003913
Synteny	Sed0003913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGAGACTCATTAACATCTACAAACCCTAACCGCTCCCAACTTCTTCTTCAATTCACGTCTGCGCTTACTCTCATTGTAGAAGCCTCTCTCGCATCTGTTCTTGCTCAACTTCAACCATGGTATTTCCAATTCTCCCTTTCTAAGTTCCTCTCTACGTTCGAAATGAGTCGATTTGTGTGGTTTGAATTGTTGATACTGGGTCAACTTCATCCTCATTTGATTGTTTTCTTCTCAGATCATTTCAGAGAAGAATCGCAGGGAGATTTCCAAGTACCTCTTTCAAGGTATAATTTAACTAGGCGATTCTCTGATCTGTGCATGATTTCGCCATTTTATTGAATTGCTGTTGTTTTTGTCTTTGTAGAGGGGGTTTGCTTTGCCAAGAAAGATTACAATCTGCCCAAGCACCCCGAAATCGATGTGCCCAATCTCCAGGTTATTAAGCTCATGCAGAGCTTCAAGTCCAAGGAGTATGTGCGCGAGACTTTTGCTTGGATGCACTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTTCCCTCCGAAATTGTCCCCGCTACCTTGAAAAAACAAGCTAAGCCTGCGGGCAGACCCTTCGGTGGAGCTTCCGGTGATCGCCCCCGGTATGGATTATATCTACAATGCTCACCAATTCATTCGTGTTTATTGCTGATTTATTAATGCTTCCGAACTATGGATTACGAATTGTTATTGTTACGGACCTAGGTTCATAAACGTTTGTTTATAATGTAGTAGCAGTATTATGCGAGGGCTTGTTTTAAAGCTTCACTTCTGTGGTTTTTATAGTTTATTGTTTTTCTTCTACGATAGGAGATCGTTCATGTAATCGACAATAGGTGCAGTACCTGTTTGTTATTTTGTAAGTAGCATTTAGTAGTATTCTGATTGAATTTTGGTGTTTTTTACGAATCAGGGGTCCACCTCGGTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGAGATGGTTACCGTGGAGGTCCTCGTGGACCAGCCGGTGAGTTTGGTGGTGACAAGGGAGGAGCTCCTGCTGATTACAGACCTTCTTTTGGGGTAATCCTTAGATATTTCATTTTACATCATCAAAGTACCATCCCTAATGTGCTTGATACTCTTTATATTCAAATGCTGCTCTTTCTGATCATTGGATGGTTATTGGAGAAGACATAATAATTCCTCTTTTTTTTTTTTATAGGAAACAAGACATAATTCTTCATGTAACTATTTAGAATTTTATTAAGTTAGAACGCCCTTGCTCAATAAGATTGTAAAATGGTTTAATCGTTTGTACGTAATTTATCCACTGGAATATTGGATAACATCTTACAGATAAGGTATAAATCAGTCTCTTCATATGTTCATTTTTTCCTTCAAAAGAGCTCCCTAATCAGTTTCAATGCTCTGTTAATATCTGGGGTTATAATGTTGAGCAGTAGTTTCTTTTGACATTTGCATATAATGTTCTCTGGTAACTTGCAGTAAAATGAATTTTCTTAGGCTCAATTGTAGAGATTATGATTTGAAATTGGTTTTACCATGTTGGTGGCACATTAAAACTATATAGGCGTTCACGTTGGTGAGTGGTTTAGAATTATGTTCTTCAAGTGAGAATAAGAGTACTAACTAGAGTGATGGGTTAGTTTGAAATGTTAGAAATATCATAGAAACTGGATTTTTTGGGGCTTATGGATCATCCTTGTGTAAAATTTCATTCTTATTATTATAGCATTAGACTGATGTGGAAATTCTTTTGATTGAATTTGAACTTTATGACAGTTGCTTGCGATGTTCTCTGCTGGCTTTACTGATCGTTATCTTGTACCTTTAAATTTTGTCAGGGTCCTGGTGGAAGACCGGGTTTCGGTCGTGGAGCGGGTAGCTTTAGTGGAGGAGGAGCTGCAGCAAGCTCAAATCTTACTTGAAACAGATGGTCGTATGAGCAGTTTAATGAATTTTGATTGGGAATGAGTCGGGATCTTGAATGAAGATCGACTGTCGAGAGAATGAGGAAGCAAACATCTTAAGCAGATTCTTATTGTTACAATTAAGCAGGTTCTTATTCGTTCCCGTGTTTTTTTTGTTTTGATTTATGTTTATGGATTTTTTTGAGGTAAAGTTAATGTTGTTTTTCACAATTGTGTTGTCATATTTTTTAGCTAAAGTTCATGTTTAACAATAAACACTCTTCATATCCATGATCTATCTTCACTTCAAGACAAGATTTTAGCTATTGGCAAATTCCACGAAGATCGGAACTTTCTACTGTTGAGTTTACATTCTAA

mRNA sequence

CCAGAGACTCATTAACATCTACAAACCCTAACCGCTCCCAACTTCTTCTTCAATTCACGTCTGCGCTTACTCTCATTGTAGAAGCCTCTCTCGCATCTGTTCTTGCTCAACTTCAACCATGATCATTTCAGAGAAGAATCGCAGGGAGATTTCCAAGTACCTCTTTCAAGAGGGGGTTTGCTTTGCCAAGAAAGATTACAATCTGCCCAAGCACCCCGAAATCGATGTGCCCAATCTCCAGGTTATTAAGCTCATGCAGAGCTTCAAGTCCAAGGAGTATGTGCGCGAGACTTTTGCTTGGATGCACTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTTCCCTCCGAAATTGTCCCCGCTACCTTGAAAAAACAAGCTAAGCCTGCGGGCAGACCCTTCGGTGGAGCTTCCGGTGATCGCCCCCGGGGTCCACCTCGGTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGAGATGGTTACCGTGGAGGTCCTCGTGGACCAGCCGGTGAGTTTGGTGGTGACAAGGGAGGAGCTCCTGCTGATTACAGACCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTCGGTCGTGGAGCGGGTAGCTTTAGTGGAGGAGGAGCTGCAGCAAGCTCAAATCTTACTTGAAACAGATGGTCGTATGAGCAGTTTAATGAATTTTGATTGGGAATGAGTCGGGATCTTGAATGAAGATCGACTGTCGAGAGAATGAGGAAGCAAACATCTTAAGCAGATTCTTATTGTTACAATTAAGCAGGTTCTTATTCGTTCCCGTGTTTTTTTTGTTTTGATTTATGTTTATGGATTTTTTTGAGGTAAAGTTAATGTTGTTTTTCACAATTGTGTTGTCATATTTTTTAGCTAAAGTTCATGTTTAACAATAAACACTCTTCATATCCATGATCTATCTTCACTTCAAGACAAGATTTTAGCTATTGGCAAATTCCACGAAGATCGGAACTTTCTACTGTTGAGTTTACATTCTAA

Coding sequence (CDS)

ATGATCATTTCAGAGAAGAATCGCAGGGAGATTTCCAAGTACCTCTTTCAAGAGGGGGTTTGCTTTGCCAAGAAAGATTACAATCTGCCCAAGCACCCCGAAATCGATGTGCCCAATCTCCAGGTTATTAAGCTCATGCAGAGCTTCAAGTCCAAGGAGTATGTGCGCGAGACTTTTGCTTGGATGCACTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTTCCCTCCGAAATTGTCCCCGCTACCTTGAAAAAACAAGCTAAGCCTGCGGGCAGACCCTTCGGTGGAGCTTCCGGTGATCGCCCCCGGGGTCCACCTCGGTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGAGATGGTTACCGTGGAGGTCCTCGTGGACCAGCCGGTGAGTTTGGTGGTGACAAGGGAGGAGCTCCTGCTGATTACAGACCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTCGGTCGTGGAGCGGGTAGCTTTAGTGGAGGAGGAGCTGCAGCAAGCTCAAATCTTACTTGA

Protein sequence

MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNLT

Homology

[Close]

BLAST of Sed0003913 vs. NCBI nr
Match: XP_023553253.1 (40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >KAG6577181.1 40S ribosomal protein S10-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015178.1 40S ribosomal protein S10-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 348.2 bits (892), Expect = 4.3e-92
Identity = 177/182 (97.25%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCFAKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAAASS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSY-GGGAAASS 180

Query: 181 NL 183
           NL
Sbjct: 181 NL 181

[Close]

BLAST of Sed0003913 vs. NCBI nr
Match: XP_022985005.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosomal protein S10-1-like [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 9.6e-92
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAAASS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSY-GGGAAASS 180

Query: 181 NL 183
           NL
Sbjct: 181 NL 181

[Close]

BLAST of Sed0003913 vs. NCBI nr
Match: XP_022931372.1 (40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S ribosomal protein S10-1-like [Cucurbita moschata])

HSP 1 Score: 346.3 bits (887), Expect = 1.6e-91
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCFAKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAA+S+
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGGAASSN 180

[Close]

BLAST of Sed0003913 vs. NCBI nr
Match: XP_022982956.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023528948.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 2.8e-91
Identity = 175/182 (96.15%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGA ASS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSY-GGGAGASS 180

Query: 181 NL 183
           NL
Sbjct: 181 NL 181

[Close]

BLAST of Sed0003913 vs. NCBI nr
Match: XP_022942965.1 (40S ribosomal protein S10-1-like [Cucurbita moschata] >KAG6600554.1 40S ribosomal protein S10-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031193.1 40S ribosomal protein S10-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345.5 bits (885), Expect = 2.8e-91
Identity = 175/183 (95.63%), Postives = 177/183 (96.72%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGG-GAAAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GG GA AS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180

Query: 181 SNL 183
           SNL
Sbjct: 181 SNL 183

[Close]

BLAST of Sed0003913 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.6e-73
Identity = 141/179 (78.77%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVCFAKKD+NLPKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGG  GDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG +S    + S
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 174

[Close]

BLAST of Sed0003913 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 141/181 (77.90%), Postives = 153/181 (84.53%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV +AKKDYNL KHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GASGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG G  GDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G   G G  +S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSS 180

[Close]

BLAST of Sed0003913 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 141/181 (77.90%), Postives = 153/181 (84.53%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV +AKKDYNL KHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GASGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG G  GDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G   G G  +S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSS 180

[Close]

BLAST of Sed0003913 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 263.1 bits (671), Expect = 2.4e-69
Identity = 141/180 (78.33%), Postives = 153/180 (85.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGG  GDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG +S    + S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 176

[Close]

BLAST of Sed0003913 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-68
Identity = 148/182 (81.32%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV FAKKD+NLP+HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAA 180
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG F GGGAA
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGF-GGGAA 177

[Close]

BLAST of Sed0003913 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.6e-92
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAAASS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSY-GGGAAASS 180

Query: 181 NL 183
           NL
Sbjct: 181 NL 181

[Close]

BLAST of Sed0003913 vs. ExPASy TrEMBL
Match: A0A6J1EYG0 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 7.9e-92
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCFAKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAA+S+
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGGAASSN 180

[Close]

BLAST of Sed0003913 vs. ExPASy TrEMBL
Match: A0A6J1J0T0 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 175/182 (96.15%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGA ASS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSY-GGGAGASS 180

Query: 181 NL 183
           NL
Sbjct: 181 NL 181

[Close]

BLAST of Sed0003913 vs. ExPASy TrEMBL
Match: A0A6J1FX77 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111447842 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 175/183 (95.63%), Postives = 177/183 (96.72%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGG-GAAAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GG GA AS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180

Query: 181 SNL 183
           SNL
Sbjct: 181 SNL 183

[Close]

BLAST of Sed0003913 vs. ExPASy TrEMBL
Match: A0A0A0KUQ3 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.1e-91
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGG  GDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAA SS
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSY-GGGAAPSS 180

Query: 181 NL 183
           NL
Sbjct: 181 NL 181

[Close]

BLAST of Sed0003913 vs. TAIR 10
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-74
Identity = 141/179 (78.77%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVCFAKKD+NLPKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGG  GDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG +S    + S
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 174

[Close]

BLAST of Sed0003913 vs. TAIR 10
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 263.1 bits (671), Expect = 1.7e-70
Identity = 141/180 (78.33%), Postives = 153/180 (85.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGG  GDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG +S    + S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 176

[Close]

BLAST of Sed0003913 vs. TAIR 10
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 260.8 bits (665), Expect = 8.4e-70
Identity = 148/182 (81.32%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV FAKKD+NLP+HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAA 180
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG F GGGAA
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGF-GGGAA 177

[Close]

BLAST of Sed0003913 vs. TAIR 10
Match: AT4G25740.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-58
Identity = 121/179 (67.60%), Postives = 132/179 (73.74%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVCFAKKD+NLPKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPF                  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPF------------------ 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS 180
                     GGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG +S    + S
Sbjct: 121 ----------GGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 146

[Close]

BLAST of Sed0003913 vs. TAIR 10
Match: AT5G41520.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 110/136 (80.88%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 46  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGA 105
           MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG 
Sbjct: 1   MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 60

Query: 106 SGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPG 165
            GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R G
Sbjct: 61  GGDRPRGPPRGD-GERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQG 120

Query: 166 FGRGAGSFSGGGAAAS 180
           FGRGAG F GGGAA S
Sbjct: 121 FGRGAGGF-GGGAAGS 131

The following BLAST results are available for this feature:

BLAST of Sed0003913 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553253.1	4.3e-92	97.25	40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40...	[more]
XP_022985005.1	9.6e-92	96.70	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosoma...	[more]
XP_022931372.1	1.6e-91	96.11	40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S riboso...	[more]
XP_022982956.1	2.8e-91	96.15	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosoma...	[more]
XP_022942965.1	2.8e-91	95.63	40S ribosomal protein S10-1-like [Cucurbita moschata] >KAG6600554.1 40S ribosoma...	[more]

BLAST of Sed0003913 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW09	3.6e-73	78.77	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
P0DKK8	1.0e-72	77.90	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	1.0e-72	77.90	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9LTF2	2.4e-69	78.33	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9FFS8	1.2e-68	81.32	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of Sed0003913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA51	4.6e-92	96.70	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=...	[more]
A0A6J1EYG0	7.9e-92	96.11	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 P...	[more]
A0A6J1J0T0	1.3e-91	96.15	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=...	[more]
A0A6J1FX77	1.3e-91	95.63	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111447842 P...	[more]
A0A0A0KUQ3	5.1e-91	95.60	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090...	[more]

BLAST of Sed0003913 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25740.1	2.5e-74	78.77	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G52650.1	1.7e-70	78.33	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.1	8.4e-70	81.32	RNA binding Plectin/S10 domain-containing protein	[more]
AT4G25740.2	1.1e-58	67.60	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.2	1.8e-48	80.88	RNA binding Plectin/S10 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 3..94 e-value: 4.6E-43 score: 145.2
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..104 e-value: 1.1E-47 score: 162.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..183
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 1..182
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003913.1	Sed0003913.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome