Sed0003854 (gene) Chayote v1

Overview


Name	Sed0003854
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-H2 finger protein ATL2
Location	LG12: 4964819 .. 4965996 (-)
RNA-Seq Expression	Sed0003854
Synteny	Sed0003854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATCAAAGGGTTGTTTCCCAGTTGCTACATTCTTTGTCATTTCTTGTTGACTTCGGTCAACACAGGAGGCTGCTTGTTTCCTTTCTTCACTGAAACCCCAAGAACTTTCCTCCATAACCCTTTCTTAAAACCCCCATTTCTTCTCTGCAAAAATCGAAACCAACAATGGAAGCCGCCGCCATGGACTACCCCTCTTCTCCTCCGCAACTCAACGACTTCGCCCTCAGCGGCAAAATCATGCTCGCCGCCATCATCATCCTCCTCTTCGTCGTCATCCTCATCGTTTGTCTCCACCTCTACGCCCGCTGGTACATCCTCCGCGCCCGCCGCCGCGGCACCCTCCGCCGCCGCAACCGCCTCGTCTTCTACTTCGAACCTCCCCCTTCCCAAACCCACAACGCCGCCGCCGCCCTTCACCGCGGCCTCGATTCCTCTGTTCTCAACTCCCTCCCTGTTTTCACCTTCTCCTCCAAATCCCACTCCGACCCCCTCGACTGCGCCGTCTGCTTGTCCGAATTCGAAGAAAGTGAAAACGGCCGGAACCTTCCCAGTTGCGGCCATAGCTTTCACACCGATTGCATCGATATGTGGTTTCATTCTCACGACACCTGTCCCCTCTGCCGCTCCCCTGTTGAGCCGCCTCTGCAAATTCCGCCGGAGGAACCGGTGAGTCTCGACCCGGGTTCGAGTTCGGGTTCTTCTGGGTTTTGCGTCGAGTGCGATCGTTCGGACCGGGTGGCCTTGTCTTCCGCTGGTTCGCGGTCGTTTCGGTCGCGCCGGAAGCCGGCGGATGTTTCGATTGAGATTCCGAGGCGGAGCGACGGCGAGTTCGCGGCGACGCTGTCGCCCTTGCCGCCGTCGACGCCGTTCACGCCGTCGTTTAAGTCGCCGATTAGCCGGGTGATGTCGCTGTCGTTTAAGAGGATTATCGGCCGGGAGAAAAGAGGCGGGGTGTCGCCGGCCGGTAATGTTGCCGGCTGTAGCTCCGGCGCCGGCGGGGAGTTGTTGGATATTGAAAAGGGGAAGGAGGTAACTCGGGATTGACTCGGCGACTTGGATGGCGAGTTGACTCAGTGAAGGGTCAAATCCAGCGTGGAAAATGACATGGCATGGGTGGCGAGTTTAGTCAGACTTTGAACGCACACGTGGCAGTGTTTACTTGGATGATGGGTCAAAT

mRNA sequence

TAATCAAAGGGTTGTTTCCCAGTTGCTACATTCTTTGTCATTTCTTGTTGACTTCGGTCAACACAGGAGGCTGCTTGTTTCCTTTCTTCACTGAAACCCCAAGAACTTTCCTCCATAACCCTTTCTTAAAACCCCCATTTCTTCTCTGCAAAAATCGAAACCAACAATGGAAGCCGCCGCCATGGACTACCCCTCTTCTCCTCCGCAACTCAACGACTTCGCCCTCAGCGGCAAAATCATGCTCGCCGCCATCATCATCCTCCTCTTCGTCGTCATCCTCATCGTTTGTCTCCACCTCTACGCCCGCTGGTACATCCTCCGCGCCCGCCGCCGCGGCACCCTCCGCCGCCGCAACCGCCTCGTCTTCTACTTCGAACCTCCCCCTTCCCAAACCCACAACGCCGCCGCCGCCCTTCACCGCGGCCTCGATTCCTCTGTTCTCAACTCCCTCCCTGTTTTCACCTTCTCCTCCAAATCCCACTCCGACCCCCTCGACTGCGCCGTCTGCTTGTCCGAATTCGAAGAAAGTGAAAACGGCCGGAACCTTCCCAGTTGCGGCCATAGCTTTCACACCGATTGCATCGATATGTGGTTTCATTCTCACGACACCTGTCCCCTCTGCCGCTCCCCTGTTGAGCCGCCTCTGCAAATTCCGCCGGAGGAACCGGTGAGTCTCGACCCGGGTTCGAGTTCGGGTTCTTCTGGGTTTTGCGTCGAGTGCGATCGTTCGGACCGGGTGGCCTTGTCTTCCGCTGGTTCGCGGTCGTTTCGGTCGCGCCGGAAGCCGGCGGATGTTTCGATTGAGATTCCGAGGCGGAGCGACGGCGAGTTCGCGGCGACGCTGTCGCCCTTGCCGCCGTCGACGCCGTTCACGCCGTCGTTTAAGTCGCCGATTAGCCGGGTGATGTCGCTGTCGTTTAAGAGGATTATCGGCCGGGAGAAAAGAGGCGGGGTGTCGCCGGCCGGTAATGTTGCCGGCTGTAGCTCCGGCGCCGGCGGGGAGTTGTTGGATATTGAAAAGGGGAAGGAGGTAACTCGGGATTGACTCGGCGACTTGGATGGCGAGTTGACTCAGTGAAGGGTCAAATCCAGCGTGGAAAATGACATGGCATGGGTGGCGAGTTTAGTCAGACTTTGAACGCACACGTGGCAGTGTTTACTTGGATGATGGGTCAAAT

Coding sequence (CDS)

ATGGAAGCCGCCGCCATGGACTACCCCTCTTCTCCTCCGCAACTCAACGACTTCGCCCTCAGCGGCAAAATCATGCTCGCCGCCATCATCATCCTCCTCTTCGTCGTCATCCTCATCGTTTGTCTCCACCTCTACGCCCGCTGGTACATCCTCCGCGCCCGCCGCCGCGGCACCCTCCGCCGCCGCAACCGCCTCGTCTTCTACTTCGAACCTCCCCCTTCCCAAACCCACAACGCCGCCGCCGCCCTTCACCGCGGCCTCGATTCCTCTGTTCTCAACTCCCTCCCTGTTTTCACCTTCTCCTCCAAATCCCACTCCGACCCCCTCGACTGCGCCGTCTGCTTGTCCGAATTCGAAGAAAGTGAAAACGGCCGGAACCTTCCCAGTTGCGGCCATAGCTTTCACACCGATTGCATCGATATGTGGTTTCATTCTCACGACACCTGTCCCCTCTGCCGCTCCCCTGTTGAGCCGCCTCTGCAAATTCCGCCGGAGGAACCGGTGAGTCTCGACCCGGGTTCGAGTTCGGGTTCTTCTGGGTTTTGCGTCGAGTGCGATCGTTCGGACCGGGTGGCCTTGTCTTCCGCTGGTTCGCGGTCGTTTCGGTCGCGCCGGAAGCCGGCGGATGTTTCGATTGAGATTCCGAGGCGGAGCGACGGCGAGTTCGCGGCGACGCTGTCGCCCTTGCCGCCGTCGACGCCGTTCACGCCGTCGTTTAAGTCGCCGATTAGCCGGGTGATGTCGCTGTCGTTTAAGAGGATTATCGGCCGGGAGAAAAGAGGCGGGGTGTCGCCGGCCGGTAATGTTGCCGGCTGTAGCTCCGGCGCCGGCGGGGAGTTGTTGGATATTGAAAAGGGGAAGGAGGTAACTCGGGATTGA

Protein sequence

MEAAAMDYPSSPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRRRNRLVFYFEPPPSQTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVSLDPGSSSGSSGFCVECDRSDRVALSSAGSRSFRSRRKPADVSIEIPRRSDGEFAATLSPLPPSTPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKEVTRD

Homology

[Close]

BLAST of Sed0003854 vs. NCBI nr
Match: XP_038896720.1 (RING-H2 finger protein ATL2 [Benincasa hispida])

HSP 1 Score: 412.1 bits (1058), Expect = 3.9e-111
Identity = 223/296 (75.34%), Postives = 242/296 (81.76%), Query Frame = 0


Query: 1   MEAAAMDY-PSSPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTL 60
           M+AA  D  P SPP LNDFALSGKIML+AIIILLFVVILI+CLHLYARWY+LRARRRGTL
Sbjct: 1   MDAAMEDLSPPSPPGLNDFALSGKIMLSAIIILLFVVILIICLHLYARWYVLRARRRGTL 60

Query: 61  RRRNRLVFYFEPP-PSQTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEF 120
           RRRNRLVFYFEP  PS  H AA + HRGLDSSVLNSLPVFTFSSKSHSDP+DCAVCLSEF
Sbjct: 61  RRRNRLVFYFEPENPSAPHGAAVSQHRGLDSSVLNSLPVFTFSSKSHSDPIDCAVCLSEF 120

Query: 121 EESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVSLDP---GSS 180
           EE+E GR LP C HSFH DCIDMWFHSH TCPLCRSPVE   + P E  +S++      S
Sbjct: 121 EENEKGRTLPKCSHSFHIDCIDMWFHSHATCPLCRSPVELAPETPAEVAISIEEPVIAES 180

Query: 181 SGSSGFCVECDRSDRVALSSAGSRSFRSRRKPAD---VSIEIPRRSDGEFAATLSPLPPS 240
             SSGFC ECDRSDR+A SSAG+RSFR+RRKPA+   VSIEIP R +GEFAA+LSP    
Sbjct: 181 GSSSGFCAECDRSDRMAPSSAGTRSFRARRKPAELAGVSIEIPTRREGEFAASLSPT--- 240

Query: 241 TPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
              TPSFKSPISRVMSLSFK IIGRE+RG VSP GN  GCSSGAGG+ LDIEKGKE
Sbjct: 241 ---TPSFKSPISRVMSLSFKMIIGRERRGDVSPTGNGVGCSSGAGGQ-LDIEKGKE 289

[Close]

BLAST of Sed0003854 vs. NCBI nr
Match: XP_022956344.1 (RING-H2 finger protein ATL2 [Cucurbita moschata])

HSP 1 Score: 398.7 bits (1023), Expect = 4.4e-107
Identity = 224/298 (75.17%), Postives = 239/298 (80.20%), Query Frame = 0


Query: 4   AAMDYPS--SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR 63
           AAMD PS  SPP  NDFALSGKIML+AIIILLFVV+LI+CLHLYARWY+LRARRRGTLRR
Sbjct: 3   AAMDDPSSTSPPGSNDFALSGKIMLSAIIILLFVVVLIICLHLYARWYVLRARRRGTLRR 62

Query: 64  RNRLVFYFEPP-PSQTHNAAAALH-RGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFE 123
           RNRLVFYFEP  PS    AA+A H RGLD SVLNSLPVFTFSSKS SDP+DCAVCLSEFE
Sbjct: 63  RNRLVFYFEPENPSAARAAASASHLRGLDPSVLNSLPVFTFSSKSFSDPIDCAVCLSEFE 122

Query: 124 ESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPE------EPVSLDPG 183
           E+E GR LP C HSFHTDCIDMWFHSH TCPLCR+PVE P + P E      EP   +PG
Sbjct: 123 ENEKGRTLPKCRHSFHTDCIDMWFHSHTTCPLCRTPVERPPETPVEVAVSIGEPAITEPG 182

Query: 184 SSSGSSGFCVECDRSDRVALSSAGSRSFRSRRKP---ADVSIEIPRRSDGEFAATLSPLP 243
            S  SS  CVECD SDR+A SS GSRSFR+RRKP   A VSIEIP R DGEFAA+LSP  
Sbjct: 183 PS--SSDLCVECDISDRMASSSTGSRSFRARRKPGELAGVSIEIPTRRDGEFAASLSPT- 242

Query: 244 PSTPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
                TPSFKSPISRVMSLSFK IIGRE+RGGVSP+G   GCSSGAGGE LDIEKGKE
Sbjct: 243 -----TPSFKSPISRVMSLSFKMIIGRERRGGVSPSGTSVGCSSGAGGE-LDIEKGKE 291

[Close]

BLAST of Sed0003854 vs. NCBI nr
Match: XP_023527938.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 4.4e-107
Identity = 224/298 (75.17%), Postives = 239/298 (80.20%), Query Frame = 0


Query: 4   AAMDYPS--SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR 63
           AAMD PS  SPP  NDFALSGKIML+AIIILLFVV+LI+CLHLYARWY+LRARRRGTLRR
Sbjct: 3   AAMDDPSSTSPPGSNDFALSGKIMLSAIIILLFVVVLIICLHLYARWYVLRARRRGTLRR 62

Query: 64  RNRLVFYFEPP-PSQTHNAAAALH-RGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFE 123
           RNRLVFYFEP  PS    AA+A H RGLD SVLNSLPVFTFSSKS SDP+DCAVCLSEFE
Sbjct: 63  RNRLVFYFEPENPSAARAAASASHLRGLDPSVLNSLPVFTFSSKSFSDPIDCAVCLSEFE 122

Query: 124 ESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPE------EPVSLDPG 183
           E+E GR LP C HSFHTDCIDMWFHSH TCPLCR+PVE P + P E      EP   +PG
Sbjct: 123 ENEKGRTLPKCRHSFHTDCIDMWFHSHTTCPLCRTPVERPPETPVEIAVSIGEPAITEPG 182

Query: 184 SSSGSSGFCVECDRSDRVALSSAGSRSFRSRRKP---ADVSIEIPRRSDGEFAATLSPLP 243
            S  SS  CVECD SDR+A SS GSRSFR+RRKP   A VSIEIP R DGEFAA+LSP  
Sbjct: 183 PS--SSDLCVECDISDRMASSSTGSRSFRARRKPGELAGVSIEIPTRRDGEFAASLSPT- 242

Query: 244 PSTPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
                TPSFKSPISRVMSLSFK IIGRE+RGGVSP+G   GCSSGAGGE LDIEKGKE
Sbjct: 243 -----TPSFKSPISRVMSLSFKMIIGRERRGGVSPSGTSVGCSSGAGGE-LDIEKGKE 291

[Close]

BLAST of Sed0003854 vs. NCBI nr
Match: XP_022979893.1 (RING-H2 finger protein ATL2-like [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 1.7e-106
Identity = 220/296 (74.32%), Postives = 235/296 (79.39%), Query Frame = 0


Query: 4   AAMDYPS--SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR 63
           AAMD PS  SPP  NDFALSGKIML+AIIILLFVV+LI+CLHLYARWY+LRARRRGTLRR
Sbjct: 3   AAMDDPSSTSPPGFNDFALSGKIMLSAIIILLFVVVLIICLHLYARWYVLRARRRGTLRR 62

Query: 64  RNRLVFYFEPPPSQTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEES 123
           RNRLVFYFEP       AAA+  RGLD SVLNSLPVF FSSKS SDP+DCAVCLSEFEE+
Sbjct: 63  RNRLVFYFEPENPSAARAAASHLRGLDPSVLNSLPVFIFSSKSFSDPIDCAVCLSEFEEN 122

Query: 124 ENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPE------EPVSLDPGSS 183
           E GR LP C HSFHTDCIDMWFHSH TCPLCR+PVE P + P E      EP   +PG S
Sbjct: 123 EKGRTLPKCRHSFHTDCIDMWFHSHTTCPLCRTPVERPPETPVEVAVSIGEPAITEPGPS 182

Query: 184 SGSSGFCVECDRSDRVALSSAGSRSFRSRRKP---ADVSIEIPRRSDGEFAATLSPLPPS 243
             SS  CVECDRSDR+A SS GSRSFR+RRKP   A VSIEIP R DGEFAA+LSP    
Sbjct: 183 --SSDLCVECDRSDRMASSSTGSRSFRARRKPGELAGVSIEIPTRRDGEFAASLSPT--- 242

Query: 244 TPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
              TPSFKSPISRVMSLSFK IIGRE+RGGVSP+G    CSSGAGGE LDIEKGKE
Sbjct: 243 ---TPSFKSPISRVMSLSFKMIIGRERRGGVSPSGTSVECSSGAGGE-LDIEKGKE 289

[Close]

BLAST of Sed0003854 vs. NCBI nr
Match: KAG7018598.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-106
Identity = 223/298 (74.83%), Postives = 238/298 (79.87%), Query Frame = 0


Query: 4   AAMDYPS--SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR 63
           AAMD PS  SPP  NDFALSGKIML+AIIILLFVV+LI+CLHLYARWY+LRARRRGTLRR
Sbjct: 3   AAMDDPSSTSPPGSNDFALSGKIMLSAIIILLFVVVLIICLHLYARWYVLRARRRGTLRR 62

Query: 64  RNRLVFYFEPP-PSQTHNAAAALH-RGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFE 123
           RNRLVFYFEP  PS    AA+A H RGLD SVLNSLPVFTFSSKS SDP+DCAVCLSEFE
Sbjct: 63  RNRLVFYFEPENPSAARAAASASHLRGLDPSVLNSLPVFTFSSKSFSDPIDCAVCLSEFE 122

Query: 124 ESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPE------EPVSLDPG 183
           E+E GR LP C HSFHTDCIDMWFHSH TCPLCR+PVE P + P E      EP   +PG
Sbjct: 123 ENEKGRTLPKCRHSFHTDCIDMWFHSHTTCPLCRTPVERPPETPVEVAVSIGEPAITEPG 182

Query: 184 SSSGSSGFCVECDRSDRVALSSAGSRSFRSRRKP---ADVSIEIPRRSDGEFAATLSPLP 243
            S  SS  CVECD SDR+  SS GSRSFR+RRKP   A VSIEIP R DGEFAA+LSP  
Sbjct: 183 PS--SSDVCVECDISDRMPSSSTGSRSFRARRKPGELAGVSIEIPTRRDGEFAASLSPT- 242

Query: 244 PSTPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
                TPSFKSPISRVMSLSFK IIGRE+RGGVSP+G   GCSSGAGGE LDIEKGKE
Sbjct: 243 -----TPSFKSPISRVMSLSFKMIIGRERRGGVSPSGTSVGCSSGAGGE-LDIEKGKE 291

[Close]

BLAST of Sed0003854 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 208.8 bits (530), Expect = 8.5e-53
Identity = 138/299 (46.15%), Postives = 181/299 (60.54%), Query Frame = 0


Query: 18  FALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR-RNR---LVFYFEPPP 77
           +A+SGKIML+AI+IL FVVIL+V LHLYARWY+LRARRR   RR RNR   +VF+   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 78  SQTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEESENGRNLPSCGHS 137
           +   +  A+  RGLD +V+ SLPVFTFS ++H DP++CAVCLSEFEESE GR LP+C H+
Sbjct: 84  TAATSVVAS--RGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHT 143

Query: 138 FHTDCIDMWFHSHDTCPLCRSPVEP---------------PLQIPPEEPVSLDPGSSSGS 197
           FH DCIDMWFHSH TCPLCRS VE                 + +  +  + ++P SSSG 
Sbjct: 144 FHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGL 203

Query: 198 SGFCVECDRSDRVALSSAGSRSFR--SRRKPADVSIEIPRRSDGEFAATLSPLPPSTPFT 257
           +               S  S+  R  S RKPA  +IE+PRR+  EF   L+     +P +
Sbjct: 204 TD----------EPHGSGSSQMLREDSGRKPA--AIEVPRRTFSEFEDELT--RRDSPAS 263

Query: 258 PSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGEL----LDIEKGKEVTR 292
            SF+SP+SR+  LSF R++ R++R   SP       S      +     DIE+G E +R
Sbjct: 264 QSFRSPMSRM--LSFTRMLSRDRRSASSPIAGAPPLSPTLSCRIQMTESDIERGGEESR 304

[Close]

BLAST of Sed0003854 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-34
Identity = 94/235 (40.00%), Postives = 126/235 (53.62%), Query Frame = 0


Query: 18  FALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRRRNRLVFYFEPPPSQTH 77
           +AL+GKIML+++I+L   VI+I+C H YARW   R  RR   R R+ L      P  Q  
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPRDQ-- 81

Query: 78  NAAAALHRGLDSSVLNSLPVFTFSSKSHSDP---LDCAVCLSEFEESENGRNLPSCGHSF 137
                    LD +VL+ +P+F +SSK+   P    +C+VCLSEFEE + GR LP CGHSF
Sbjct: 82  --------ALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 141

Query: 138 HTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVSLDPGSSSGSSGFCVECDRSDRVALS 197
           H DCID WF S  TCPLCR+PV+PP Q+       ++ GSSS SS      +  +R  + 
Sbjct: 142 HVDCIDTWFRSRSTCPLCRAPVQPPFQV-------IETGSSSSSSPLTFPTEGCEREPID 201

Query: 198 SAGSRSFRSRRKPADVSIEIPRRSDGEFAATLSPLPPSTPFTPSFKSPISRVMSL 250
            AG            + ++I R  + E +       P  P     K P SRV+SL
Sbjct: 202 LAG------------IIVDISREVEFEGS------NPGLPIENGSKFPGSRVLSL 221

[Close]

BLAST of Sed0003854 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32
Identity = 97/236 (41.10%), Postives = 130/236 (55.08%), Query Frame = 0


Query: 18  FALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRRR---NRLVFYFEPPPS 77
           ++L+GKIMLA++IIL   VILI+C H YARW   R  RR  +RRR   +         P+
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IRRRISAHLRSLAAARDPT 81

Query: 78  QTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPL-DCAVCLSEFEESENGRNLPSCGHS 137
           Q+ ++ +     LD +VL  +P+F +S K+H  PL +C+VCLSEFEE + GR LP CGH 
Sbjct: 82  QSSSSLSP----LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHV 141

Query: 138 FHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVS-----------LDPGSSSGSSGFC 197
           FH DCID WF S  +CPLCR+PV+P   +   EPV+            + GSSS S    
Sbjct: 142 FHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSS---- 201

Query: 198 VECDRSDRVALSSAGSRSFR-----SRRKPAD---VSIEIPRRSDGEFAATLSPLP 231
              D S+    SS+     R       R+P D   + +EIPR    EF  + S LP
Sbjct: 202 ---DESESSTPSSSSGSPVRFPMEACEREPIDLVGIIVEIPR----EFQDSNSDLP 240

[Close]

BLAST of Sed0003854 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.6e-28
Identity = 86/228 (37.72%), Postives = 122/228 (53.51%), Query Frame = 0


Query: 25  MLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRRRNRLVFYFEPPPSQTHNAAAALH 84
           ML   I++L +VIL+V LHLY RWY+LR+       R      +F  P S          
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRS---SPFNRTTAASTFFTDPSSTP-------- 60

Query: 85  RGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEESENGRNLPSCGHSFHTDCIDMWFH 144
            GL+ S++ SLP+FTFS+ +    ++C+VCLSEF+++E+GR +P+C H+FH  CIDMWFH
Sbjct: 61  GGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFH 120

Query: 145 SHDTCPLCRSPVEP----------PLQIPPEEPVSLDPGSSSGSSGFCVECDRSDRVALS 204
           SH +CPLCRS +EP           + I   +PV  D     G+               +
Sbjct: 121 SHSSCPLCRSQIEPFAGGVKSSMDEVAISISDPVYGDTNHHEGTE--------------T 180

Query: 205 SAGSRSFRSRRKPADVSIEIPRRSDGEFAATLSPLPPSTPFTPSFKSP 243
           +  S    S+RKPA  +IEI +R+ GE    LS        + SF+SP
Sbjct: 181 TGDSVPEDSQRKPA--AIEISQRNLGEIENDLSR-------SHSFRSP 194

[Close]

BLAST of Sed0003854 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-21
Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 21  SGKIMLAAIIILLFVVILIVCLHLYARWY-------ILRARRRGTLRRRNRL-------- 80
           +  ++LAA++ LL VV+ ++ LH YAR++          A R    RRRNR         
Sbjct: 26  NSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRI 85

Query: 81  -----VFYFEPPPSQTHNAAAALHRGLDSSVLNSLPVFTF--SSKSHSDPLDCAVCLSEF 140
                +  F+   S     A    +GLDSSV++S+P+F +  + +   +  +C +CL  +
Sbjct: 86  IPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLW 145

Query: 141 EESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPV 157
           E  + GR L +CGH FH +CIDMW  SH TCPLCRSPV
Sbjct: 146 EAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPV 183

[Close]

BLAST of Sed0003854 vs. ExPASy TrEMBL
Match: A0A6J1GYS2 (RING-H2 finger protein ATL2 OS=Cucurbita moschata OX=3662 GN=LOC111458072 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.1e-107
Identity = 224/298 (75.17%), Postives = 239/298 (80.20%), Query Frame = 0


Query: 4   AAMDYPS--SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR 63
           AAMD PS  SPP  NDFALSGKIML+AIIILLFVV+LI+CLHLYARWY+LRARRRGTLRR
Sbjct: 3   AAMDDPSSTSPPGSNDFALSGKIMLSAIIILLFVVVLIICLHLYARWYVLRARRRGTLRR 62

Query: 64  RNRLVFYFEPP-PSQTHNAAAALH-RGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFE 123
           RNRLVFYFEP  PS    AA+A H RGLD SVLNSLPVFTFSSKS SDP+DCAVCLSEFE
Sbjct: 63  RNRLVFYFEPENPSAARAAASASHLRGLDPSVLNSLPVFTFSSKSFSDPIDCAVCLSEFE 122

Query: 124 ESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPE------EPVSLDPG 183
           E+E GR LP C HSFHTDCIDMWFHSH TCPLCR+PVE P + P E      EP   +PG
Sbjct: 123 ENEKGRTLPKCRHSFHTDCIDMWFHSHTTCPLCRTPVERPPETPVEVAVSIGEPAITEPG 182

Query: 184 SSSGSSGFCVECDRSDRVALSSAGSRSFRSRRKP---ADVSIEIPRRSDGEFAATLSPLP 243
            S  SS  CVECD SDR+A SS GSRSFR+RRKP   A VSIEIP R DGEFAA+LSP  
Sbjct: 183 PS--SSDLCVECDISDRMASSSTGSRSFRARRKPGELAGVSIEIPTRRDGEFAASLSPT- 242

Query: 244 PSTPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
                TPSFKSPISRVMSLSFK IIGRE+RGGVSP+G   GCSSGAGGE LDIEKGKE
Sbjct: 243 -----TPSFKSPISRVMSLSFKMIIGRERRGGVSPSGTSVGCSSGAGGE-LDIEKGKE 291

[Close]

BLAST of Sed0003854 vs. ExPASy TrEMBL
Match: A0A6J1IXL9 (RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111479448 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 8.1e-107
Identity = 220/296 (74.32%), Postives = 235/296 (79.39%), Query Frame = 0


Query: 4   AAMDYPS--SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR 63
           AAMD PS  SPP  NDFALSGKIML+AIIILLFVV+LI+CLHLYARWY+LRARRRGTLRR
Sbjct: 3   AAMDDPSSTSPPGFNDFALSGKIMLSAIIILLFVVVLIICLHLYARWYVLRARRRGTLRR 62

Query: 64  RNRLVFYFEPPPSQTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEES 123
           RNRLVFYFEP       AAA+  RGLD SVLNSLPVF FSSKS SDP+DCAVCLSEFEE+
Sbjct: 63  RNRLVFYFEPENPSAARAAASHLRGLDPSVLNSLPVFIFSSKSFSDPIDCAVCLSEFEEN 122

Query: 124 ENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPE------EPVSLDPGSS 183
           E GR LP C HSFHTDCIDMWFHSH TCPLCR+PVE P + P E      EP   +PG S
Sbjct: 123 EKGRTLPKCRHSFHTDCIDMWFHSHTTCPLCRTPVERPPETPVEVAVSIGEPAITEPGPS 182

Query: 184 SGSSGFCVECDRSDRVALSSAGSRSFRSRRKP---ADVSIEIPRRSDGEFAATLSPLPPS 243
             SS  CVECDRSDR+A SS GSRSFR+RRKP   A VSIEIP R DGEFAA+LSP    
Sbjct: 183 --SSDLCVECDRSDRMASSSTGSRSFRARRKPGELAGVSIEIPTRRDGEFAASLSPT--- 242

Query: 244 TPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
              TPSFKSPISRVMSLSFK IIGRE+RGGVSP+G    CSSGAGGE LDIEKGKE
Sbjct: 243 ---TPSFKSPISRVMSLSFKMIIGRERRGGVSPSGTSVECSSGAGGE-LDIEKGKE 289

[Close]

BLAST of Sed0003854 vs. ExPASy TrEMBL
Match: A0A0A0LAM5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164500 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.4e-106
Identity = 214/295 (72.54%), Postives = 237/295 (80.34%), Query Frame = 0


Query: 4   AAMDYPS--SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR 63
           AAM+ PS  SP  + DFALSGKIML+AIIILLFVV+LI+CLHLYARWY+LRARRRG LRR
Sbjct: 3   AAMEDPSTPSPSGIKDFALSGKIMLSAIIILLFVVLLIICLHLYARWYVLRARRRGNLRR 62

Query: 64  RNRLVFYFEPPPSQT-HNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEE 123
           RNRLVFYFEP  S   H AA + HRGLDSSVLNSLPVFTFSSKSHSDP+DCAVCLSEFEE
Sbjct: 63  RNRLVFYFEPENSSAPHGAALSQHRGLDSSVLNSLPVFTFSSKSHSDPIDCAVCLSEFEE 122

Query: 124 SENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVSLD----PGSSS 183
           +E GR LP C HSFH DCIDMWFHSH TCPLCRSPVE P + P E  +S++      S S
Sbjct: 123 NEKGRTLPKCSHSFHIDCIDMWFHSHATCPLCRSPVEMPTEAPVEVEISMEEPVIAESGS 182

Query: 184 GSSGFCVECDRSDRVALSSAGSRSFRSRRKPAD---VSIEIPRRSDGEFAATLSPLPPST 243
            SSGFC ECDRSDR+A SS GSRSFR+RRKP++   VSIEIP R +GEFA++LSP     
Sbjct: 183 SSSGFCAECDRSDRMAPSSTGSRSFRARRKPSETGGVSIEIPTRREGEFASSLSPT---- 242

Query: 244 PFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
             TPSFKSPISRVMSLSFK IIG E+RGG SP GN  GCSSG+G E +DIEKGKE
Sbjct: 243 --TPSFKSPISRVMSLSFKMIIGLERRGGASPTGNGVGCSSGSGVE-VDIEKGKE 290

[Close]

BLAST of Sed0003854 vs. ExPASy TrEMBL
Match: A0A5D3CWE4 (RING-H2 finger protein ATL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001210 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.2e-104
Identity = 212/297 (71.38%), Postives = 233/297 (78.45%), Query Frame = 0


Query: 1   MEAAAMDYPS-SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTL 60
           MEAA  D  S SP  + DFALSGKIML+AIIILLFVV LI+CLHLYARWY+LRARRRGTL
Sbjct: 1   MEAAMEDTSSPSPSGIKDFALSGKIMLSAIIILLFVVFLIICLHLYARWYVLRARRRGTL 60

Query: 61  RRRNRLVFYFEPPPSQT-HNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEF 120
           RRRNRLVFYFEP  S   H  A +  RGLDSSV+NSLPVFTFSSKSHSDP+DCAVCLSEF
Sbjct: 61  RRRNRLVFYFEPENSSAPHGTAVSQRRGLDSSVINSLPVFTFSSKSHSDPIDCAVCLSEF 120

Query: 121 EESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVSLD----PGS 180
           EE+E GR LP C HSFH DCIDMWFHSH TCPLCRSPVE   + P E  +S++      S
Sbjct: 121 EENEKGRTLPKCSHSFHIDCIDMWFHSHATCPLCRSPVEMATEAPAEVEISMEEPAIAES 180

Query: 181 SSGSSGFCVECDRSDRVALSSAGSRSFRSRRKPAD---VSIEIPRRSDGEFAATLSPLPP 240
            S SSGFC ECDR DR+  SS GSRSFR+RRKP++   VSIEIP R +GEFA++LSP   
Sbjct: 181 GSSSSGFCAECDRPDRMPPSSTGSRSFRARRKPSEMGGVSIEIPTRREGEFASSLSPT-- 240

Query: 241 STPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
               TPSFKSPISRVMSLSFK IIGRE+RGG SP GN  GCSSG+G E LDIEKGKE
Sbjct: 241 ----TPSFKSPISRVMSLSFKMIIGRERRGGTSPTGNGVGCSSGSGVE-LDIEKGKE 290

[Close]

BLAST of Sed0003854 vs. ExPASy TrEMBL
Match: A0A1S3AY49 (RING-H2 finger protein ATL2 OS=Cucumis melo OX=3656 GN=LOC103483864 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.2e-104
Identity = 212/297 (71.38%), Postives = 233/297 (78.45%), Query Frame = 0


Query: 1   MEAAAMDYPS-SPPQLNDFALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTL 60
           MEAA  D  S SP  + DFALSGKIML+AIIILLFVV LI+CLHLYARWY+LRARRRGTL
Sbjct: 1   MEAAMEDTSSPSPSGIKDFALSGKIMLSAIIILLFVVFLIICLHLYARWYVLRARRRGTL 60

Query: 61  RRRNRLVFYFEPPPSQT-HNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEF 120
           RRRNRLVFYFEP  S   H  A +  RGLDSSV+NSLPVFTFSSKSHSDP+DCAVCLSEF
Sbjct: 61  RRRNRLVFYFEPENSSAPHGTAVSQRRGLDSSVINSLPVFTFSSKSHSDPIDCAVCLSEF 120

Query: 121 EESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVSLD----PGS 180
           EE+E GR LP C HSFH DCIDMWFHSH TCPLCRSPVE   + P E  +S++      S
Sbjct: 121 EENEKGRTLPKCSHSFHIDCIDMWFHSHATCPLCRSPVEMATEAPAEVEISMEEPAIAES 180

Query: 181 SSGSSGFCVECDRSDRVALSSAGSRSFRSRRKPAD---VSIEIPRRSDGEFAATLSPLPP 240
            S SSGFC ECDR DR+  SS GSRSFR+RRKP++   VSIEIP R +GEFA++LSP   
Sbjct: 181 GSSSSGFCAECDRPDRMPPSSTGSRSFRARRKPSEMGGVSIEIPTRREGEFASSLSPT-- 240

Query: 241 STPFTPSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGELLDIEKGKE 289
               TPSFKSPISRVMSLSFK IIGRE+RGG SP GN  GCSSG+G E LDIEKGKE
Sbjct: 241 ----TPSFKSPISRVMSLSFKMIIGRERRGGTSPTGNGVGCSSGSGVE-LDIEKGKE 290

[Close]

BLAST of Sed0003854 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 208.8 bits (530), Expect = 6.1e-54
Identity = 138/299 (46.15%), Postives = 181/299 (60.54%), Query Frame = 0


Query: 18  FALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRR-RNR---LVFYFEPPP 77
           +A+SGKIML+AI+IL FVVIL+V LHLYARWY+LRARRR   RR RNR   +VF+   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 78  SQTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEESENGRNLPSCGHS 137
           +   +  A+  RGLD +V+ SLPVFTFS ++H DP++CAVCLSEFEESE GR LP+C H+
Sbjct: 84  TAATSVVAS--RGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHT 143

Query: 138 FHTDCIDMWFHSHDTCPLCRSPVEP---------------PLQIPPEEPVSLDPGSSSGS 197
           FH DCIDMWFHSH TCPLCRS VE                 + +  +  + ++P SSSG 
Sbjct: 144 FHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGL 203

Query: 198 SGFCVECDRSDRVALSSAGSRSFR--SRRKPADVSIEIPRRSDGEFAATLSPLPPSTPFT 257
           +               S  S+  R  S RKPA  +IE+PRR+  EF   L+     +P +
Sbjct: 204 TD----------EPHGSGSSQMLREDSGRKPA--AIEVPRRTFSEFEDELT--RRDSPAS 263

Query: 258 PSFKSPISRVMSLSFKRIIGREKRGGVSPAGNVAGCSSGAGGEL----LDIEKGKEVTR 292
            SF+SP+SR+  LSF R++ R++R   SP       S      +     DIE+G E +R
Sbjct: 264 QSFRSPMSRM--LSFTRMLSRDRRSASSPIAGAPPLSPTLSCRIQMTESDIERGGEESR 304

[Close]

BLAST of Sed0003854 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 7.4e-36
Identity = 94/235 (40.00%), Postives = 126/235 (53.62%), Query Frame = 0


Query: 18  FALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRRRNRLVFYFEPPPSQTH 77
           +AL+GKIML+++I+L   VI+I+C H YARW   R  RR   R R+ L      P  Q  
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPRDQ-- 81

Query: 78  NAAAALHRGLDSSVLNSLPVFTFSSKSHSDP---LDCAVCLSEFEESENGRNLPSCGHSF 137
                    LD +VL+ +P+F +SSK+   P    +C+VCLSEFEE + GR LP CGHSF
Sbjct: 82  --------ALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 141

Query: 138 HTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVSLDPGSSSGSSGFCVECDRSDRVALS 197
           H DCID WF S  TCPLCR+PV+PP Q+       ++ GSSS SS      +  +R  + 
Sbjct: 142 HVDCIDTWFRSRSTCPLCRAPVQPPFQV-------IETGSSSSSSPLTFPTEGCEREPID 201

Query: 198 SAGSRSFRSRRKPADVSIEIPRRSDGEFAATLSPLPPSTPFTPSFKSPISRVMSL 250
            AG            + ++I R  + E +       P  P     K P SRV+SL
Sbjct: 202 LAG------------IIVDISREVEFEGS------NPGLPIENGSKFPGSRVLSL 221

[Close]

BLAST of Sed0003854 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 97/236 (41.10%), Postives = 130/236 (55.08%), Query Frame = 0


Query: 18  FALSGKIMLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRRR---NRLVFYFEPPPS 77
           ++L+GKIMLA++IIL   VILI+C H YARW   R  RR  +RRR   +         P+
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IRRRISAHLRSLAAARDPT 81

Query: 78  QTHNAAAALHRGLDSSVLNSLPVFTFSSKSHSDPL-DCAVCLSEFEESENGRNLPSCGHS 137
           Q+ ++ +     LD +VL  +P+F +S K+H  PL +C+VCLSEFEE + GR LP CGH 
Sbjct: 82  QSSSSLSP----LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHV 141

Query: 138 FHTDCIDMWFHSHDTCPLCRSPVEPPLQIPPEEPVS-----------LDPGSSSGSSGFC 197
           FH DCID WF S  +CPLCR+PV+P   +   EPV+            + GSSS S    
Sbjct: 142 FHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSS---- 201

Query: 198 VECDRSDRVALSSAGSRSFR-----SRRKPAD---VSIEIPRRSDGEFAATLSPLP 231
              D S+    SS+     R       R+P D   + +EIPR    EF  + S LP
Sbjct: 202 ---DESESSTPSSSSGSPVRFPMEACEREPIDLVGIIVEIPR----EFQDSNSDLP 240

[Close]

BLAST of Sed0003854 vs. TAIR 10
Match: AT4G15975.1 (RING/U-box superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29
Identity = 87/228 (38.16%), Postives = 123/228 (53.95%), Query Frame = 0


Query: 25  MLAAIIILLFVVILIVCLHLYARWYILRARRRGTLRRRNRLVFYFEPPPSQTHNAAAALH 84
           ML   I++L +VIL+V LHLY RWY+LR+       R      +F  P S          
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRS---SPFNRTTAASTFFTDPSSTP-------- 60

Query: 85  RGLDSSVLNSLPVFTFSSKSHSDPLDCAVCLSEFEESENGRNLPSCGHSFHTDCIDMWFH 144
            GL+ S++ SLP+FTFS+ +    ++C+VCLSEF+++E+GR +P+C H+FH DCIDMWFH
Sbjct: 61  GGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFH 120

Query: 145 SHDTCPLCRSPVEP----------PLQIPPEEPVSLDPGSSSGSSGFCVECDRSDRVALS 204
           SH +CPLCRS +EP           + I   +PV  D     G+               +
Sbjct: 121 SHSSCPLCRSLIEPFAGGVKSTMDEVAISISDPVYGDTNHHEGTE--------------T 180

Query: 205 SAGSRSFRSRRKPADVSIEIPRRSDGEFAATLSPLPPSTPFTPSFKSP 243
           +  S    S+RKPA  +IEI +R+ GE    LS        + SF+SP
Sbjct: 181 TGDSVPEDSQRKPA--AIEISQRNLGEIENDLSR-------SHSFRSP 194

[Close]

BLAST of Sed0003854 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 103.6 bits (257), Expect = 2.7e-22
Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 21  SGKIMLAAIIILLFVVILIVCLHLYARWY-------ILRARRRGTLRRRNRL-------- 80
           +  ++LAA++ LL VV+ ++ LH YAR++          A R    RRRNR         
Sbjct: 26  NSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRI 85

Query: 81  -----VFYFEPPPSQTHNAAAALHRGLDSSVLNSLPVFTF--SSKSHSDPLDCAVCLSEF 140
                +  F+   S     A    +GLDSSV++S+P+F +  + +   +  +C +CL  +
Sbjct: 86  IPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLW 145

Query: 141 EESENGRNLPSCGHSFHTDCIDMWFHSHDTCPLCRSPV 157
           E  + GR L +CGH FH +CIDMW  SH TCPLCRSPV
Sbjct: 146 EAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPV 183

The following BLAST results are available for this feature:

BLAST of Sed0003854 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896720.1	3.9e-111	75.34	RING-H2 finger protein ATL2 [Benincasa hispida]	[more]
XP_022956344.1	4.4e-107	75.17	RING-H2 finger protein ATL2 [Cucurbita moschata]	[more]
XP_023527938.1	4.4e-107	75.17	RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979893.1	1.7e-106	74.32	RING-H2 finger protein ATL2-like [Cucurbita maxima]	[more]
KAG7018598.1	2.2e-106	74.83	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Sed0003854 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	8.5e-53	46.15	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
O22255	1.0e-34	40.00	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	1.7e-32	41.10	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8LF65	5.6e-28	37.72	RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2	[more]
Q9LUZ9	3.9e-21	37.34	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]

BLAST of Sed0003854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYS2	2.1e-107	75.17	RING-H2 finger protein ATL2 OS=Cucurbita moschata OX=3662 GN=LOC111458072 PE=4 S...	[more]
A0A6J1IXL9	8.1e-107	74.32	RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111479448 PE=...	[more]
A0A0A0LAM5	2.4e-106	72.54	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164500 P...	[more]
A0A5D3CWE4	2.2e-104	71.38	RING-H2 finger protein ATL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AY49	2.2e-104	71.38	RING-H2 finger protein ATL2 OS=Cucumis melo OX=3656 GN=LOC103483864 PE=4 SV=1	[more]

BLAST of Sed0003854 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	6.1e-54	46.15	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	7.4e-36	40.00	RING/U-box superfamily protein	[more]
AT3G62690.1	1.2e-33	41.10	AtL5	[more]
AT4G15975.1	1.0e-29	38.16	RING/U-box superfamily protein	[more]
AT5G58580.1	2.7e-22	37.34	TOXICOS EN LEVADURA 63	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 111..152 e-value: 6.4E-7 score: 39.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 110..153 e-value: 2.1E-12 score: 47.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 111..153 score: 12.961374
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 74..160 e-value: 7.3E-22 score: 78.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..292
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 16..214
None	No IPR available	PANTHER	PTHR45768:SF34	RING-H2 FINGER PROTEIN ATL64	coord: 16..214
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 110..153 e-value: 1.85928E-17 score: 72.3427
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 91..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003854.1	Sed0003854.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane