Sed0003846 (gene) Chayote v1

Overview


Name	Sed0003846
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MAPK kinase substrate protein At1g80180-like
Location	LG12: 33854427 .. 33854759 (+)
RNA-Seq Expression	Sed0003846
Synteny	Sed0003846

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGTTGCAGAGGTCCGCCGTGTCGTTCCGGCGACAGGGATCCTCCGGCGTGGTTTGGAACGACCAATTCCTCATCGGCGAATTGAAACCCACGTCGAACCGAGACGACGCCGGAGATCAGCTCAGGCATTCGCGGAGCGTCGGATCGTCATCGGCGGCCAGATTTGAACGTTCACGATCTTCCAGAGTGGCCCACCGGGTGGAGGCTATTTTGTCGCCGTCGCCGGCGTCGGATCCATCTTCGCCGAAGCTCTCCGGCTGCGGCTTCTGCGGCATATTTGGCCGCCCCGTCGGTGGGCCCCGCCATCAGAAATCTAACAACCGTTGA

mRNA sequence

ATGGCGGCGTTGCAGAGGTCCGCCGTGTCGTTCCGGCGACAGGGATCCTCCGGCGTGGTTTGGAACGACCAATTCCTCATCGGCGAATTGAAACCCACGTCGAACCGAGACGACGCCGGAGATCAGCTCAGGCATTCGCGGAGCGTCGGATCGTCATCGGCGGCCAGATTTGAACGTTCACGATCTTCCAGAGTGGCCCACCGGGTGGAGGCTATTTTGTCGCCGTCGCCGGCGTCGGATCCATCTTCGCCGAAGCTCTCCGGCTGCGGCTTCTGCGGCATATTTGGCCGCCCCGTCGGTGGGCCCCGCCATCAGAAATCTAACAACCGTTGA

Coding sequence (CDS)

ATGGCGGCGTTGCAGAGGTCCGCCGTGTCGTTCCGGCGACAGGGATCCTCCGGCGTGGTTTGGAACGACCAATTCCTCATCGGCGAATTGAAACCCACGTCGAACCGAGACGACGCCGGAGATCAGCTCAGGCATTCGCGGAGCGTCGGATCGTCATCGGCGGCCAGATTTGAACGTTCACGATCTTCCAGAGTGGCCCACCGGGTGGAGGCTATTTTGTCGCCGTCGCCGGCGTCGGATCCATCTTCGCCGAAGCTCTCCGGCTGCGGCTTCTGCGGCATATTTGGCCGCCCCGTCGGTGGGCCCCGCCATCAGAAATCTAACAACCGTTGA

Protein sequence

MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQLRHSRSVGSSSAARFERSRSSRVAHRVEAILSPSPASDPSSPKLSGCGFCGIFGRPVGGPRHQKSNNR

Homology

[Close]

BLAST of Sed0003846 vs. NCBI nr
Match: XP_022145059.1 (uncharacterized protein At1g15400 [Momordica charantia])

HSP 1 Score: 127.1 bits (318), Expect = 9.4e-26
Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQ--LRHSRSVGSSSAARFE 60
           MA LQRSAVSFRRQGSSG VW+D+F  GELKPT+  +   D   LR SRSVGS S++ F 
Sbjct: 1   MAGLQRSAVSFRRQGSSGRVWDDRFFSGELKPTTCHELLQDDAVLRPSRSVGSVSSS-FH 60

Query: 61  RSRSSRVAHRVEAILSPSP---ASDPSSPKLSGCGFCGIFGRPVGGPRHQKSNNR 111
           RSRSS  AHR+ A++SPSP   ++DP+SPK +GCGFC +FGRP+   RHQKS NR
Sbjct: 61  RSRSSSAAHRM-AVISPSPPPSSADPASPKFAGCGFCRVFGRPIARDRHQKSINR 113

[Close]

BLAST of Sed0003846 vs. NCBI nr
Match: XP_004151607.1 (uncharacterized protein At1g15400 [Cucumis sativus] >KGN65310.1 hypothetical protein Csa_020108 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 3.6e-25
Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNR--DD------AGDQLRHSRSVGSS 60
           MA LQRSAVSFRRQGSSG+VW+D+FL GELKPT+ R  +D         +LR SRSV S 
Sbjct: 1   MAELQRSAVSFRRQGSSGLVWDDRFLSGELKPTTKRLHEDQHNVVFLSGELRPSRSVRSG 60

Query: 61  SAARFERSRSSRVAHRVEAIL---SPSPA-SDPSSPKLSGCGFCGIFGRPVGGPRHQKSN 111
            A  FER RSS  A++++ I    SPSP+  DPSSPK +GCGFCG+FGRPVGG R  KSN
Sbjct: 61  GAPTFERHRSS-AAYKMDTISPSPSPSPSRGDPSSPKFAGCGFCGVFGRPVGGNRQHKSN 120

[Close]

BLAST of Sed0003846 vs. NCBI nr
Match: XP_008465027.1 (PREDICTED: uncharacterized protein At1g15400 [Cucumis melo] >KAA0046761.1 uncharacterized protein E6C27_scaffold216G00440 [Cucumis melo var. makuwa] >TYK29686.1 uncharacterized protein E5676_scaffold64G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 124.4 bits (311), Expect = 6.1e-25
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDD-------AGDQLRHSRSVGSSS 60
           MA LQRSAVSFRRQGSSG+VW+D+FL GELKPT    +          +LR SR VGS  
Sbjct: 1   MAELQRSAVSFRRQGSSGLVWDDRFLSGELKPTKRFHEDQHNVVFLSGELRPSRRVGSGG 60

Query: 61  AARFERSRSSRVAHRVEAILSPSP---ASDPSSPKLSGCGFCGIFGRPVGGPRHQKSNNR 111
              FER+RSS  A++++AI SPSP     DPSSPK +GCGFCG+FGRPVGG R  KSN R
Sbjct: 61  GPSFERTRSSG-AYKMDAI-SPSPPPSRGDPSSPKFAGCGFCGVFGRPVGGNRQHKSNKR 118

[Close]

BLAST of Sed0003846 vs. NCBI nr
Match: XP_023516734.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24
Identity = 72/119 (60.50%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQ---------LRHSRSVGS 60
           MA LQRSAVSFRRQGSSG+VW+D++  GEL PT  R +   Q         LR SR+VGS
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWDDRYFSGELTPTMRRHEEQPQRDALFLSGELRPSRNVGS 60

Query: 61  SSAARFERSRSSRVAHRVEAILSPS---PASDPSSPKLSGCGFCGIFGRPVGGPRHQKS 108
           +S   FERSRSS  +HR+EAI SPS    A++PSSPK +GCGFCG+FGRP+GG RH KS
Sbjct: 61  AST--FERSRSS-ASHRIEAI-SPSRSPSAANPSSPKFTGCGFCGVFGRPIGGARHHKS 115

[Close]

BLAST of Sed0003846 vs. NCBI nr
Match: XP_022960593.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita moschata] >KAG6589861.1 hypothetical protein SDJN03_15284, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-24
Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQ---------LRHSRSVGS 60
           MA LQRSAVSFRRQGSSG+VW+D+F  GEL PT  R +   Q         LR SR+VGS
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWDDRFFSGELTPTMRRHEEQPQRDALFLSGELRPSRNVGS 60

Query: 61  SSAARFERSRSSRVAHRVEAILSPS---PASDPSSPKLSGCGFCGIFGRPVGGPRHQKSN 110
           +S   FERSRSS  +HR+EAI SPS    A++PSSPK +GCGFCG+FGRP+GG R  KS 
Sbjct: 61  AST--FERSRSS-ASHRIEAI-SPSRSPTAANPSSPKFTGCGFCGVFGRPIGGARQHKSK 117

[Close]

BLAST of Sed0003846 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRD----------------------- 60
           M  LQRS +SFRRQGSSG+V++D+ LI EL  + N +                       
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDR-LIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  -DAGDQLRHSRSVGSSSAARFERSRS----SRVAHRVEAILSPSPASDPSSPKLSGCGFC 111
            D  D+LR  ++ G  +    ERSRS    ++  HR    +  SPA DP SP++S CG C
Sbjct: 61  IDEKDKLRPIKT-GGGAPGGIERSRSNGGGAQRHHRTTGRV--SPAVDPPSPRISSCGCC 120

[Close]

BLAST of Sed0003846 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.0e-08
Identity = 46/128 (35.94%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQLRHSRSVGSSSA------ 60
           MA LQRS +SFRRQGSSG+VW+D+ LI EL   +  D  G+ L+        ++      
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDR-LIAELSQQAANDRKGETLQQDEQAKLITSEVQDQT 60

Query: 61  ---------------ARFERSRSSRVA----HRVEAILSPSPASDPSSPKLSGCGFCGIF 104
                             ERSRS+       HR    +  SPA DP SP+LS  G C  F
Sbjct: 61  TKPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRV--SPAVDPPSPRLSAFGCCSAF 120

[Close]

BLAST of Sed0003846 vs. ExPASy TrEMBL
Match: A0A6J1CU40 (uncharacterized protein At1g15400 OS=Momordica charantia OX=3673 GN=LOC111014577 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.5e-26
Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQ--LRHSRSVGSSSAARFE 60
           MA LQRSAVSFRRQGSSG VW+D+F  GELKPT+  +   D   LR SRSVGS S++ F 
Sbjct: 1   MAGLQRSAVSFRRQGSSGRVWDDRFFSGELKPTTCHELLQDDAVLRPSRSVGSVSSS-FH 60

Query: 61  RSRSSRVAHRVEAILSPSP---ASDPSSPKLSGCGFCGIFGRPVGGPRHQKSNNR 111
           RSRSS  AHR+ A++SPSP   ++DP+SPK +GCGFC +FGRP+   RHQKS NR
Sbjct: 61  RSRSSSAAHRM-AVISPSPPPSSADPASPKFAGCGFCRVFGRPIARDRHQKSINR 113

[Close]

BLAST of Sed0003846 vs. ExPASy TrEMBL
Match: A0A0A0LTQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G308810 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.7e-25
Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNR--DD------AGDQLRHSRSVGSS 60
           MA LQRSAVSFRRQGSSG+VW+D+FL GELKPT+ R  +D         +LR SRSV S 
Sbjct: 1   MAELQRSAVSFRRQGSSGLVWDDRFLSGELKPTTKRLHEDQHNVVFLSGELRPSRSVRSG 60

Query: 61  SAARFERSRSSRVAHRVEAIL---SPSPA-SDPSSPKLSGCGFCGIFGRPVGGPRHQKSN 111
            A  FER RSS  A++++ I    SPSP+  DPSSPK +GCGFCG+FGRPVGG R  KSN
Sbjct: 61  GAPTFERHRSS-AAYKMDTISPSPSPSPSRGDPSSPKFAGCGFCGVFGRPVGGNRQHKSN 120

[Close]

BLAST of Sed0003846 vs. ExPASy TrEMBL
Match: A0A5A7TZI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00370 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDD-------AGDQLRHSRSVGSSS 60
           MA LQRSAVSFRRQGSSG+VW+D+FL GELKPT    +          +LR SR VGS  
Sbjct: 1   MAELQRSAVSFRRQGSSGLVWDDRFLSGELKPTKRFHEDQHNVVFLSGELRPSRRVGSGG 60

Query: 61  AARFERSRSSRVAHRVEAILSPSP---ASDPSSPKLSGCGFCGIFGRPVGGPRHQKSNNR 111
              FER+RSS  A++++AI SPSP     DPSSPK +GCGFCG+FGRPVGG R  KSN R
Sbjct: 61  GPSFERTRSSG-AYKMDAI-SPSPPPSRGDPSSPKFAGCGFCGVFGRPVGGNRQHKSNKR 118

[Close]

BLAST of Sed0003846 vs. ExPASy TrEMBL
Match: A0A1S3CMU7 (uncharacterized protein At1g15400 OS=Cucumis melo OX=3656 GN=LOC103502744 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDD-------AGDQLRHSRSVGSSS 60
           MA LQRSAVSFRRQGSSG+VW+D+FL GELKPT    +          +LR SR VGS  
Sbjct: 1   MAELQRSAVSFRRQGSSGLVWDDRFLSGELKPTKRFHEDQHNVVFLSGELRPSRRVGSGG 60

Query: 61  AARFERSRSSRVAHRVEAILSPSP---ASDPSSPKLSGCGFCGIFGRPVGGPRHQKSNNR 111
              FER+RSS  A++++AI SPSP     DPSSPK +GCGFCG+FGRPVGG R  KSN R
Sbjct: 61  GPSFERTRSSG-AYKMDAI-SPSPPPSRGDPSSPKFAGCGFCGVFGRPVGGNRQHKSNKR 118

[Close]

BLAST of Sed0003846 vs. ExPASy TrEMBL
Match: A0A6J1H9E8 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111461328 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24
Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQ---------LRHSRSVGS 60
           MA LQRSAVSFRRQGSSG+VW+D+F  GEL PT  R +   Q         LR SR+VGS
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWDDRFFSGELTPTMRRHEEQPQRDALFLSGELRPSRNVGS 60

Query: 61  SSAARFERSRSSRVAHRVEAILSPS---PASDPSSPKLSGCGFCGIFGRPVGGPRHQKSN 110
           +S   FERSRSS  +HR+EAI SPS    A++PSSPK +GCGFCG+FGRP+GG R  KS 
Sbjct: 61  AST--FERSRSS-ASHRIEAI-SPSRSPTAANPSSPKFTGCGFCGVFGRPIGGARQHKSK 117

[Close]

BLAST of Sed0003846 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-13
Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 3   ALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQLRHSRSVGSSSAARFERSRS 62
           ALQRS  SFRRQGSSG++WND+FL GE++    ++D  +   H     +++ A  +RS S
Sbjct: 2   ALQRSTASFRRQGSSGLIWNDRFLSGEIRNDERQEDRCND--HRDGSMAATTATVKRSAS 61

Query: 63  SRVAHRVEAILSPSPASDPSSPKLS--GCGFCGIFGRPVGGPRHQKSNNR 111
                    +   SPA DP SPK+S  GCGFC +F     G R  +   R
Sbjct: 62  DGGCGHGGRLGELSPALDPPSPKISAVGCGFCSLFSS--NGKRRSRGRRR 107

[Close]

BLAST of Sed0003846 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 7.7e-10
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRD----------------------- 60
           M  LQRS +SFRRQGSSG+V++D+ LI EL  + N +                       
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDR-LIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  -DAGDQLRHSRSVGSSSAARFERSRS----SRVAHRVEAILSPSPASDPSSPKLSGCGFC 111
            D  D+LR  ++ G  +    ERSRS    ++  HR    +  SPA DP SP++S CG C
Sbjct: 61  IDEKDKLRPIKT-GGGAPGGIERSRSNGGGAQRHHRTTGRV--SPAVDPPSPRISSCGCC 120

[Close]

BLAST of Sed0003846 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 7.7e-10
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRD----------------------- 60
           M  LQRS +SFRRQGSSG+V++D+ LI EL  + N +                       
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDR-LIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  -DAGDQLRHSRSVGSSSAARFERSRS----SRVAHRVEAILSPSPASDPSSPKLSGCGFC 111
            D  D+LR  ++ G  +    ERSRS    ++  HR    +  SPA DP SP++S CG C
Sbjct: 61  IDEKDKLRPIKT-GGGAPGGIERSRSNGGGAQRHHRTTGRV--SPAVDPPSPRISSCGCC 120

[Close]

BLAST of Sed0003846 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 7.7e-10
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRD----------------------- 60
           M  LQRS +SFRRQGSSG+V++D+ LI EL  + N +                       
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDR-LIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  -DAGDQLRHSRSVGSSSAARFERSRS----SRVAHRVEAILSPSPASDPSSPKLSGCGFC 111
            D  D+LR  ++ G  +    ERSRS    ++  HR    +  SPA DP SP++S CG C
Sbjct: 61  IDEKDKLRPIKT-GGGAPGGIERSRSNGGGAQRHHRTTGRV--SPAVDPPSPRISSCGCC 120

[Close]

BLAST of Sed0003846 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09
Identity = 46/128 (35.94%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 1   MAALQRSAVSFRRQGSSGVVWNDQFLIGELKPTSNRDDAGDQLRHSRSVGSSSA------ 60
           MA LQRS +SFRRQGSSG+VW+D+ LI EL   +  D  G+ L+        ++      
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDR-LIAELSQQAANDRKGETLQQDEQAKLITSEVQDQT 60

Query: 61  ---------------ARFERSRSSRVA----HRVEAILSPSPASDPSSPKLSGCGFCGIF 104
                             ERSRS+       HR    +  SPA DP SP+LS  G C  F
Sbjct: 61  TKPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRV--SPAVDPPSPRLSAFGCCSAF 120

The following BLAST results are available for this feature:

BLAST of Sed0003846 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145059.1	9.4e-26	62.61	uncharacterized protein At1g15400 [Momordica charantia]	[more]
XP_004151607.1	3.6e-25	60.66	uncharacterized protein At1g15400 [Cucumis sativus] >KGN65310.1 hypothetical pro...	[more]
XP_008465027.1	6.1e-25	60.00	PREDICTED: uncharacterized protein At1g15400 [Cucumis melo] >KAA0046761.1 unchar...	[more]
XP_023516734.1	1.0e-24	60.50	MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960593.1	3.0e-24	59.50	MAPK kinase substrate protein At1g80180-like [Cucurbita moschata] >KAG6589861.1 ...	[more]

BLAST of Sed0003846 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI29	1.1e-08	36.23	Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 P...	[more]
Q9SSC1	7.0e-08	35.94	MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g8...	[more]

BLAST of Sed0003846 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CU40	4.5e-26	62.61	uncharacterized protein At1g15400 OS=Momordica charantia OX=3673 GN=LOC111014577...	[more]
A0A0A0LTQ5	1.7e-25	60.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G308810 PE=4 SV=1	[more]
A0A5A7TZI7	2.9e-25	60.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CMU7	2.9e-25	60.00	uncharacterized protein At1g15400 OS=Cucumis melo OX=3656 GN=LOC103502744 PE=4 S...	[more]
A0A6J1H9E8	1.5e-24	59.50	MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0003846 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20100.1	1.5e-13	40.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15400.1	7.7e-10	36.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.2	7.7e-10	36.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.3	7.7e-10	36.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G80180.1	5.0e-09	35.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031421	Protein of unknown function DUF4666	PFAM	PF15697	DUF4666	coord: 1..98 e-value: 4.9E-25 score: 88.4
IPR031421	Protein of unknown function DUF4666	PANTHER	PTHR33730	OS05G0542732 PROTEIN-RELATED	coord: 1..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..65
None	No IPR available	PANTHER	PTHR33730:SF15	SUBFAMILY NOT NAMED	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003846.1	Sed0003846.1	mRNA