Homology
BLAST of Sed0003814 vs. NCBI nr
Match:
XP_023536820.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1010.7 bits (2612), Expect = 5.3e-291
Identity = 519/630 (82.38%), Postives = 555/630 (88.10%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
M ++GVGP GPEDFGS G LS APSFEEYADEVRMRYVMGLQLM+ELQCE LVKEFNASP
Sbjct: 114 MSNDGVGPIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASP 173
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVT+T+VFDE WAFE +QDSESQ DPENIR SSRHK EPHNLYGQR
Sbjct: 174 VICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQR 233
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW++SLRKKIPLS TLAVSFLACHVAREAI PTD+MKWSLEGKLPYFAAF+DI +RI
Sbjct: 234 VVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRI 293
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPIS KHMYRPSR P QKLESLAAS+AHTIGLNLPPVNFHSIACRYLNKLA+P
Sbjct: 294 GQTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALP 353
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
ID+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILYNLHGFGEWEKSLS
Sbjct: 354 IDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 413
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
NCASS PPNQK HS+P ++F +SENGP F SHN+DN VS+KYSHL PE+TA E
Sbjct: 414 GNCASSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASE 473
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FLHKIEARYHEI ETYEYSK LPTYL HCKDVVFAGLES+ E+H EER+IEQ WKYYQNE
Sbjct: 474 FLHKIEARYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 533
Query: 421 KDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHS 480
KD +Q ED+DQNAASNQKRLRE NDRSSN+ KK R+ED S ES DN+TESNNSQQSHS
Sbjct: 534 KDQEQTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHS 593
Query: 481 SKRSENADEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKI 540
SK SEN D+ELSS+DKASTPTS DEAI+RLKLDMEE RFCYIPPRV PKRF YLHYSRKI
Sbjct: 594 SKSSENVDDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 653
Query: 541 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSV 600
D GALTYAAHADYY+LLRACARAAQV RIMHIGVLSLEKRLSWLESRI+HSL+LTPSSV
Sbjct: 654 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSV 713
Query: 601 SCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
SCEFCSDV P+H LDSI LSDLNI
Sbjct: 714 SCEFCSDVMPDHAT-----LDSIDLSDLNI 738
BLAST of Sed0003814 vs. NCBI nr
Match:
KAG7020963.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1007.7 bits (2604), Expect = 4.5e-290
Identity = 518/630 (82.22%), Postives = 554/630 (87.94%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
M ++GVGP GPEDFGS G LS APSFEEYADEVRMRYVMGLQLM+ELQCE LVKEFNASP
Sbjct: 114 MSNDGVGPIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASP 173
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVT+T+VFDE WAFE +QDSESQ DPENIR SSRHK EPHNLYGQR
Sbjct: 174 VICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQR 233
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW++SLRKKIPLS TLAVSFLACHVAREAI PTD+MKWSLEGKLPYFAAF+DI +RI
Sbjct: 234 VVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRI 293
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPIS KHMYRPSR P QKLESLAAS+AHTIGLNLPPVNFHSIACRYLNKLA+P
Sbjct: 294 GQTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALP 353
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
ID+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILYNLHGFGEWEKSLS
Sbjct: 354 IDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 413
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
NCASS PPNQK HS+P ++F +SENGP F SHN+DNP VS+K SHL PE+TA E
Sbjct: 414 GNCASSFPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASE 473
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FLHKIEARYHEI ETYEYSK LPTYL HCKDVVFAGLES+ E+H EER+IEQ WKYYQNE
Sbjct: 474 FLHKIEARYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 533
Query: 421 KDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHS 480
KD +Q ED+DQNAASNQKRLRE NDRSSN+ KK R+ED S ES DN+TESNNSQQSHS
Sbjct: 534 KDQEQTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHS 593
Query: 481 SKRSENADEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKI 540
SK SEN D+ELSS+DKAST TS DEAI+RLKLDMEE RFCYIPPRV PKRF YLHYSRKI
Sbjct: 594 SKSSENVDDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 653
Query: 541 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSV 600
D GALTYAAHADYY+LLRACARAAQV RIMHIGVLSLEKRLSWLESRI+HSL+LTPSSV
Sbjct: 654 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSV 713
Query: 601 SCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
SCEFCSDV P+H LDSI LSDLNI
Sbjct: 714 SCEFCSDVMPDHAT-----LDSIDLSDLNI 738
BLAST of Sed0003814 vs. NCBI nr
Match:
XP_022965475.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita maxima])
HSP 1 Score: 1006.5 bits (2601), Expect = 9.9e-290
Identity = 517/630 (82.06%), Postives = 554/630 (87.94%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
M ++GVGP GPEDFGS G+LS APSFEEYADEVRMRYVMGLQLM+ELQCE LVKEFNASP
Sbjct: 114 MSNDGVGPIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASP 173
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVT+T+VFDE WAFE +QDSESQ DPENIR SSRHK EPHNLYGQR
Sbjct: 174 VICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQR 233
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW++SLRKKIPLS TLAVSFLACHVAREAI PTD+MKWSLEGKLPYFAAF+DI +RI
Sbjct: 234 VVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRI 293
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPIS KHMYRPSR P QKLESLAAS+AHTIGLNLPPVNFHSIA RYLNKLA+P
Sbjct: 294 GQTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALP 353
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+D+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILYNLHGFGEWEKSLS
Sbjct: 354 VDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 413
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
NCASS PPNQK HS+P ++F +SENGP F SHN+DN VS+K+SHL PE+TA E
Sbjct: 414 GNCASSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASE 473
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FLHKIEARYHEI ETYEYSK LP YL HCKDVVFAGLES+ E+H EER+IEQ WKYYQNE
Sbjct: 474 FLHKIEARYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 533
Query: 421 KDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHS 480
KD +Q EDVDQNAASNQKRLRE NDRSSN+ KK R+ED S ES DN+TESNNSQQSHS
Sbjct: 534 KDQEQTEDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHS 593
Query: 481 SKRSENADEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKI 540
SK SEN D+ELSS+DKASTPTS DEAI+RLKLDMEE RFCYIPPRV PKRF YLHYSRKI
Sbjct: 594 SKSSENVDDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 653
Query: 541 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSV 600
D GALTYAAHADYY+LLRACARAAQV RIMHIGVLSLEKRLSWLESRIHHSL+LTPSSV
Sbjct: 654 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSV 713
Query: 601 SCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
SCEFCSDV P+H LDSI LSDLNI
Sbjct: 714 SCEFCSDVMPDHAT-----LDSIDLSDLNI 738
BLAST of Sed0003814 vs. NCBI nr
Match:
XP_022937641.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita moschata])
HSP 1 Score: 999.6 bits (2583), Expect = 1.2e-287
Identity = 515/630 (81.75%), Postives = 552/630 (87.62%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
M ++GVGP GPEDFGS G LS APSFEEYADEVRMRYVMGLQLM+ELQCE LVKEFNASP
Sbjct: 114 MSNDGVGPIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASP 173
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVT+T+VFDE WAFE +QDSESQ DPENIR SSRHK EPHNLYGQR
Sbjct: 174 VICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQR 233
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW++SLRKKIPLS TLAVSFLACHVAREAI PTD+MKWSLEGKLPYFAAF+DI +RI
Sbjct: 234 VVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRI 293
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPIS KHMYRPSR P QKLESLAAS+AHTIGLNLPPVNFHSIA RYLNKLA+P
Sbjct: 294 GKTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALP 353
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+D+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILYNLHGFGEWEKSLS
Sbjct: 354 VDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 413
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
NCASS PPNQK HS+P + F +SENGP F SHN+DN VS+KYSHL PE+TA E
Sbjct: 414 GNCASSFPPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASE 473
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FLHKIEARYH+I ETYEYSK LPTYL HCKDVVFAGLES+ E+H EER+IEQ WKYYQNE
Sbjct: 474 FLHKIEARYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 533
Query: 421 KDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHS 480
KD +Q ED+DQNAASNQKRLRE NDRSSN+ KK R+ED S ES DN+TESNNSQQSHS
Sbjct: 534 KDQEQTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHS 593
Query: 481 SKRSENADEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKI 540
SK SEN D+ELSS+DKAST TS DEAI+RLKLDMEE RFCYIPPRV PKRF YLHYSRKI
Sbjct: 594 SKSSENVDDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 653
Query: 541 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSV 600
D GALTYAAHADYY+LLRACARAAQV RIMHIGVLSLEKRLSWLESRI+HSL+LTPSSV
Sbjct: 654 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSV 713
Query: 601 SCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
SCEFCSDV P+H LDSI LSDLNI
Sbjct: 714 SCEFCSDVMPDHAT-----LDSIDLSDLNI 738
BLAST of Sed0003814 vs. NCBI nr
Match:
XP_022149924.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Momordica charantia])
HSP 1 Score: 986.1 bits (2548), Expect = 1.4e-283
Identity = 513/633 (81.04%), Postives = 554/633 (87.52%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
+L +GVGPTGPEDFGS G+LS APSFEEYA+EVRMRYVMGLQLM+ELQCEALVKEF ASP
Sbjct: 109 LLDDGVGPTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASP 168
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVTATRVFDE WAFE +QDSESQ QDP NIR SSRHKAEPHNL+GQR
Sbjct: 169 VICGLAASIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQR 228
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW+KSLRKKIPLS TLA+SFLACHVAREAI PTD+MKWSLEGKLPYFAAFIDIENRI
Sbjct: 229 VVVVWVKSLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRI 288
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPISSKHMYRPSR PP QKLESLAASIAHTIGLNLPPVNFH IACRYL+KL++P
Sbjct: 289 GQTSRACPISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLP 348
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+++ L ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILY+LHGFGEWEKSLS
Sbjct: 349 VEKILHHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLS 408
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
INCASS PPNQK+HS+P +F D ENG F SHN+DN S + +L KPE+T E
Sbjct: 409 INCASSFPPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTE 468
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FL KIEARY+EI ETYEYS+DLPTYL HCKDVVFAGLES+ E+H EE++IEQ W YYQN+
Sbjct: 469 FLSKIEARYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQ 528
Query: 421 K-DTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKT-ESNNSQQS 480
K D++Q EDVDQNAASNQKRLREGS DR SNESKK R E+ S ES DNKT SNNSQQS
Sbjct: 529 KEDSEQTEDVDQNAASNQKRLREGSADRLSNESKKPRGEEGISRESSDNKTSNSNNSQQS 588
Query: 481 HSSKRSENAD-EELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYS 540
HSSK SE D EELSSKDKA TSID ++KRLKLDMEEKRFCYIPPRVNPKRF YLHYS
Sbjct: 589 HSSKSSEGGDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYS 648
Query: 541 RKIDGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTP 600
RKIDGGALTYAAHADYYILLRACARAAQ+DIRIMHIGVLSLEKRLSWLE+RIHHSL+LTP
Sbjct: 649 RKIDGGALTYAAHADYYILLRACARAAQIDIRIMHIGVLSLEKRLSWLEARIHHSLHLTP 708
Query: 601 SSVSCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
S VSCEFCSDV PE+ +DSIGLSDLNI
Sbjct: 709 SGVSCEFCSDVVPENAT-----VDSIGLSDLNI 736
BLAST of Sed0003814 vs. ExPASy Swiss-Prot
Match:
Q5XVF0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabidopsis thaliana OX=3702 GN=MEE12 PE=1 SV=1)
HSP 1 Score: 421.4 bits (1082), Expect = 1.8e-116
Identity = 258/608 (42.43%), Postives = 357/608 (58.72%), Query Frame = 0
Query: 8 PTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASPVICGLAA 67
PT P DF ++ L S+E Y DE R RYV +M+ QC+ALV +FN +P+I GL
Sbjct: 111 PTEPVDFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVG 170
Query: 68 SIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHAS--SRHKAEPHNLYGQRAVVVW 127
I LR+V + V+ + WA I+DSE Q +D E ++ A RHKAEP N+ G+RAV +W
Sbjct: 171 PISLRYVALSGVYHKDWANNAIRDSEHQSEDGE-VKDAKRLKRHKAEPRNIDGKRAVTIW 230
Query: 128 IKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRIGHTSR 187
L+K +PLS +L +SFLACH A + PTD+++W+ EGKLPY + F+DI ++G S
Sbjct: 231 FGILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSA 290
Query: 188 ACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVPIDECL 247
ACP+ M RP + Q LE+ A+ IA TIGL LPPVNF+ IA Y+ +L++P D+ L
Sbjct: 291 ACPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKIL 350
Query: 248 PLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS-INCA 307
LA I WS+PP+L+LSTNE +LPSRVCVMSILI+ +R+LYN++G G WE+SL +N +
Sbjct: 351 DLARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNAS 410
Query: 308 SSSPPNQKSHSNPGSSFDSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIEFLHKIEARY 367
+ + FD++ E L +EA+Y
Sbjct: 411 DGDSETNSGTAEKATEFDTQ------------------------------ELLKNLEAKY 470
Query: 368 HEI-TETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEE--RIIEQLWKYYQNEKDTQQA 427
HE+ ET E KDL +YL K+ FAGLE E+ ++ RI++ LW Y ++D +
Sbjct: 471 HEVAAETLESEKDLVSYLSLGKNEFFAGLE---EDSPDDTYRIVDNLWNGYPKDEDIE-- 530
Query: 428 EDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHSSKRSEN 487
KR R+ +D S N+ +D++ N+ S SS+R+E+
Sbjct: 531 --------CLPKRGRDWDDDVSLNQL-----------SLYDSRFSDGNNPCSSSSRRNES 590
Query: 488 A----DEELSSKDKASTPTSIDE-AIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKID 547
D S ++S+P + E AIKRL DM + FCYIPPRV KR DYL Y RK +
Sbjct: 591 VSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQYVRKKE 650
Query: 548 GGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSVS 605
GAL YAAHADYYILLR CA+ A++D+R MH GVLS E+RL+W+E RI L+LT ++
Sbjct: 651 DGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLTRPLMT 658
BLAST of Sed0003814 vs. ExPASy Swiss-Prot
Match:
Q5W770 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0352700 PE=3 SV=2)
HSP 1 Score: 355.5 bits (911), Expect = 1.2e-96
Identity = 225/587 (38.33%), Postives = 325/587 (55.37%), Query Frame = 0
Query: 8 PTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASPVICGLAA 67
P+ P DF + P E+ A VR RYV GLQ++L+ Q EALV+ + LA
Sbjct: 106 PSEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAG 165
Query: 68 SIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQRA----VV 127
+IWLR+V A++VFDE W + + + S + H++S+ K Q++
Sbjct: 166 TIWLRWVAASKVFDEMWVHKMLAIAASVEEG-----HSASKDKQSELEGDAQKSQSSYEF 225
Query: 128 VWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRIGHT 187
++++SLR +P+ TLAV FLACHVARE I PTD+ +W++EGKLPY AAF ++ +G +
Sbjct: 226 LFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLGSS 285
Query: 188 SRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVPIDE 247
CP+SS+ ++RP+R +LE+ A SIA IGL LP VNF+ IA R+L +L++PI++
Sbjct: 286 LNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIEK 345
Query: 248 CLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEK-SLSIN 307
LP ACRIYEW+MP +LWLS+N R+PSRVCVM+ILI+ +R+LY ++G G WE + + N
Sbjct: 346 ILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQTEN 405
Query: 308 CASSSPPNQKSHSNPGSSFDSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIEFLHKIEA 367
S P HS S +SE E A E L + A
Sbjct: 406 AVGSDPEASAPHSIEPDSNNSE-------------------------EFDARELLCTLAA 465
Query: 368 RYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNEKDTQQAE 427
Y +I ++YSK++ +YL +CKDVVF G+ LE EE +I+ W Y+ ++
Sbjct: 466 SYDKINVGHDYSKEVHSYLKYCKDVVFTGMTFSLE---EEHLIDIFWDMYKG----KEVM 525
Query: 428 DVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHSSKRSENA 487
+D+NA Q++L R++N K + F+D
Sbjct: 526 LLDENAKLCQEKL------RTTNGVNKRCRDGRFADTKC--------------------- 585
Query: 488 DEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKIDGGALTY 547
STP + A++ +K MEE FCY+ PR YL Y+R+ G+L Y
Sbjct: 586 ---------CSTPLG-NCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSLIY 616
Query: 548 AAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLN 590
AHADYYILLR A+ A+VD+R++H VL LE+RL W+E R+ SLN
Sbjct: 646 VAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616
BLAST of Sed0003814 vs. ExPASy Swiss-Prot
Match:
B8AX23 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19584 PE=3 SV=1)
HSP 1 Score: 355.1 bits (910), Expect = 1.6e-96
Identity = 225/587 (38.33%), Postives = 325/587 (55.37%), Query Frame = 0
Query: 8 PTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASPVICGLAA 67
P+ P DF + P E+ A VR RYV GLQ++L+ Q EALV+ + LA
Sbjct: 106 PSEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAG 165
Query: 68 SIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQRA----VV 127
+IWLR+V A++VFDE W + + + S + H++S+ K Q++
Sbjct: 166 TIWLRWVAASKVFDEMWVHKMLAIAASVEEG-----HSASKDKQSELEGDAQKSQSSYEF 225
Query: 128 VWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRIGHT 187
++++SLR +P+ TLAV FLACHVARE I PTD+ +W++EGKLPY AAF ++ +G +
Sbjct: 226 LFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLGSS 285
Query: 188 SRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVPIDE 247
CP+SS+ ++RP+R +LE+ A SIA IGL LP VNF+ IA R+L +L++PI++
Sbjct: 286 LNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIEK 345
Query: 248 CLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEK-SLSIN 307
LP ACRIYEW+MP +LWLS+N R+PSRVCVM+ILI+ +R+LY ++G G WE + + N
Sbjct: 346 ILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQTEN 405
Query: 308 CASSSPPNQKSHSNPGSSFDSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIEFLHKIEA 367
S P HS S +SE E A E L + A
Sbjct: 406 AVGSDPEASAPHSIEPDSNNSE-------------------------EFDARELLCTLAA 465
Query: 368 RYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNEKDTQQAE 427
Y +I ++YSK++ +YL +CKDVVF G+ LE EE +I+ W Y+ ++
Sbjct: 466 SYDKIDVGHDYSKEVHSYLKYCKDVVFTGMTFSLE---EEHLIDIFWDMYKG----KEVM 525
Query: 428 DVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHSSKRSENA 487
+D+NA Q++L R++N K + F+D
Sbjct: 526 LLDENAKLCQEKL------RTTNGVNKRCRDGRFADTKC--------------------- 585
Query: 488 DEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKIDGGALTY 547
STP + A++ +K MEE FCY+ PR YL Y+R+ G+L Y
Sbjct: 586 ---------CSTPLG-NCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSLIY 616
Query: 548 AAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLN 590
AHADYYILLR A+ A+VD+R++H VL LE+RL W+E R+ SLN
Sbjct: 646 VAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616
BLAST of Sed0003814 vs. ExPASy TrEMBL
Match:
A0A6J1HNT6 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita maxima OX=3661 GN=LOC111465368 PE=3 SV=1)
HSP 1 Score: 1006.5 bits (2601), Expect = 4.8e-290
Identity = 517/630 (82.06%), Postives = 554/630 (87.94%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
M ++GVGP GPEDFGS G+LS APSFEEYADEVRMRYVMGLQLM+ELQCE LVKEFNASP
Sbjct: 114 MSNDGVGPIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASP 173
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVT+T+VFDE WAFE +QDSESQ DPENIR SSRHK EPHNLYGQR
Sbjct: 174 VICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQR 233
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW++SLRKKIPLS TLAVSFLACHVAREAI PTD+MKWSLEGKLPYFAAF+DI +RI
Sbjct: 234 VVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRI 293
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPIS KHMYRPSR P QKLESLAAS+AHTIGLNLPPVNFHSIA RYLNKLA+P
Sbjct: 294 GQTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALP 353
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+D+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILYNLHGFGEWEKSLS
Sbjct: 354 VDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 413
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
NCASS PPNQK HS+P ++F +SENGP F SHN+DN VS+K+SHL PE+TA E
Sbjct: 414 GNCASSFPPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASE 473
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FLHKIEARYHEI ETYEYSK LP YL HCKDVVFAGLES+ E+H EER+IEQ WKYYQNE
Sbjct: 474 FLHKIEARYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 533
Query: 421 KDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHS 480
KD +Q EDVDQNAASNQKRLRE NDRSSN+ KK R+ED S ES DN+TESNNSQQSHS
Sbjct: 534 KDQEQTEDVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHS 593
Query: 481 SKRSENADEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKI 540
SK SEN D+ELSS+DKASTPTS DEAI+RLKLDMEE RFCYIPPRV PKRF YLHYSRKI
Sbjct: 594 SKSSENVDDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 653
Query: 541 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSV 600
D GALTYAAHADYY+LLRACARAAQV RIMHIGVLSLEKRLSWLESRIHHSL+LTPSSV
Sbjct: 654 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSV 713
Query: 601 SCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
SCEFCSDV P+H LDSI LSDLNI
Sbjct: 714 SCEFCSDVMPDHAT-----LDSIDLSDLNI 738
BLAST of Sed0003814 vs. ExPASy TrEMBL
Match:
A0A6J1FAY0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita moschata OX=3662 GN=LOC111443985 PE=3 SV=1)
HSP 1 Score: 999.6 bits (2583), Expect = 5.9e-288
Identity = 515/630 (81.75%), Postives = 552/630 (87.62%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
M ++GVGP GPEDFGS G LS APSFEEYADEVRMRYVMGLQLM+ELQCE LVKEFNASP
Sbjct: 114 MSNDGVGPIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASP 173
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVT+T+VFDE WAFE +QDSESQ DPENIR SSRHK EPHNLYGQR
Sbjct: 174 VICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQR 233
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW++SLRKKIPLS TLAVSFLACHVAREAI PTD+MKWSLEGKLPYFAAF+DI +RI
Sbjct: 234 VVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRI 293
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPIS KHMYRPSR P QKLESLAAS+AHTIGLNLPPVNFHSIA RYLNKLA+P
Sbjct: 294 GKTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALP 353
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+D+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILYNLHGFGEWEKSLS
Sbjct: 354 VDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 413
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
NCASS PPNQK HS+P + F +SENGP F SHN+DN VS+KYSHL PE+TA E
Sbjct: 414 GNCASSFPPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASE 473
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FLHKIEARYH+I ETYEYSK LPTYL HCKDVVFAGLES+ E+H EER+IEQ WKYYQNE
Sbjct: 474 FLHKIEARYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 533
Query: 421 KDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHS 480
KD +Q ED+DQNAASNQKRLRE NDRSSN+ KK R+ED S ES DN+TESNNSQQSHS
Sbjct: 534 KDQEQTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHS 593
Query: 481 SKRSENADEELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKI 540
SK SEN D+ELSS+DKAST TS DEAI+RLKLDMEE RFCYIPPRV PKRF YLHYSRKI
Sbjct: 594 SKSSENVDDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 653
Query: 541 DGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSV 600
D GALTYAAHADYY+LLRACARAAQV RIMHIGVLSLEKRLSWLESRI+HSL+LTPSSV
Sbjct: 654 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSV 713
Query: 601 SCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
SCEFCSDV P+H LDSI LSDLNI
Sbjct: 714 SCEFCSDVMPDHAT-----LDSIDLSDLNI 738
BLAST of Sed0003814 vs. ExPASy TrEMBL
Match:
A0A6J1D8G5 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordica charantia OX=3673 GN=LOC111018221 PE=3 SV=1)
HSP 1 Score: 986.1 bits (2548), Expect = 6.7e-284
Identity = 513/633 (81.04%), Postives = 554/633 (87.52%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
+L +GVGPTGPEDFGS G+LS APSFEEYA+EVRMRYVMGLQLM+ELQCEALVKEF ASP
Sbjct: 109 LLDDGVGPTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASP 168
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
VICGLAASIWLRFVTATRVFDE WAFE +QDSESQ QDP NIR SSRHKAEPHNL+GQR
Sbjct: 169 VICGLAASIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQR 228
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VVVW+KSLRKKIPLS TLA+SFLACHVAREAI PTD+MKWSLEGKLPYFAAFIDIENRI
Sbjct: 229 VVVVWVKSLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRI 288
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPISSKHMYRPSR PP QKLESLAASIAHTIGLNLPPVNFH IACRYL+KL++P
Sbjct: 289 GQTSRACPISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLP 348
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+++ L ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILY+LHGFGEWEKSLS
Sbjct: 349 VEKILHHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLS 408
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
INCASS PPNQK+HS+P +F D ENG F SHN+DN S + +L KPE+T E
Sbjct: 409 INCASSFPPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTE 468
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEERIIEQLWKYYQNE 420
FL KIEARY+EI ETYEYS+DLPTYL HCKDVVFAGLES+ E+H EE++IEQ W YYQN+
Sbjct: 469 FLSKIEARYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQ 528
Query: 421 K-DTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKT-ESNNSQQS 480
K D++Q EDVDQNAASNQKRLREGS DR SNESKK R E+ S ES DNKT SNNSQQS
Sbjct: 529 KEDSEQTEDVDQNAASNQKRLREGSADRLSNESKKPRGEEGISRESSDNKTSNSNNSQQS 588
Query: 481 HSSKRSENAD-EELSSKDKASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYS 540
HSSK SE D EELSSKDKA TSID ++KRLKLDMEEKRFCYIPPRVNPKRF YLHYS
Sbjct: 589 HSSKSSEGGDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYS 648
Query: 541 RKIDGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTP 600
RKIDGGALTYAAHADYYILLRACARAAQ+DIRIMHIGVLSLEKRLSWLE+RIHHSL+LTP
Sbjct: 649 RKIDGGALTYAAHADYYILLRACARAAQIDIRIMHIGVLSLEKRLSWLEARIHHSLHLTP 708
Query: 601 SSVSCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
S VSCEFCSDV PE+ +DSIGLSDLNI
Sbjct: 709 SGVSCEFCSDVVPENAT-----VDSIGLSDLNI 736
BLAST of Sed0003814 vs. ExPASy TrEMBL
Match:
A0A0A0LHI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074100 PE=3 SV=1)
HSP 1 Score: 919.5 bits (2375), Expect = 7.7e-264
Identity = 481/634 (75.87%), Postives = 542/634 (85.49%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
ML++GVGPTGPEDFGS +LS PSFEEYADEVRMRYVMGLQL++ELQCE LVKEF A+P
Sbjct: 115 MLNDGVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATP 174
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
+ICGLAASIWLRFVTATRVFDE WAF+T+Q+SESQ DPE IR S HK EPHN YGQR
Sbjct: 175 IICGLAASIWLRFVTATRVFDEDWAFQTVQESESQCLDPERIRRVCSSHKDEPHNFYGQR 234
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VV+W+KSLRKKIPL TLAVSFLACHVAREAI PTD++KWSLEGKLPY+AAF+DIE+RI
Sbjct: 235 VVVLWVKSLRKKIPLFSTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRI 294
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPISSK M+RPSR QKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLA+P
Sbjct: 295 GKTSRACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALP 354
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+D+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MRILYNLHGFGEWEKSLS
Sbjct: 355 VDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 414
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
++CAS PP+QK+HS+P ++F DSEN P F SH++DNP VS + P +T E
Sbjct: 415 VDCASCFPPHQKTHSSPANNFSNMQADSENRPGFTSHDVDNPSVSP-----ENPHLTTTE 474
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESM-LENHGEERIIEQLWKYYQN 420
FL KIEARYHEI ETYEYSKDLPTYL +CKDV FAG ES+ +++H E+++IE+LW YYQN
Sbjct: 475 FLRKIEARYHEIAETYEYSKDLPTYLQYCKDVAFAGSESLFIDDHDEQKMIEKLWNYYQN 534
Query: 421 EKDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSR-NEDHFSDESFDNKTESNNSQQS 480
EKD Q EDVDQNAASNQKRLREGSNDR SNESKK + ED S ES +N+T S +S+QS
Sbjct: 535 EKDYDQTEDVDQNAASNQKRLREGSNDRLSNESKKVKGEEDRISRESLNNRTGSIDSRQS 594
Query: 481 HSSKRSENA-DEELSSKDK-ASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYLHY 540
HSSK +N+ D+E SS DK AS+ TSI+EAI++LKLDMEEKRFCYIPPR+NPKRFDYLHY
Sbjct: 595 HSSKSLDNSDDDEQSSVDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRINPKRFDYLHY 654
Query: 541 SRKIDGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLT 600
SRKID GALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLE RIH SL LT
Sbjct: 655 SRKIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKSLRLT 714
Query: 601 PSSVSCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
P+S++CEFCSDV P+H + S+GLSDL+I
Sbjct: 715 PTSITCEFCSDV-PDH-------VGSVGLSDLDI 735
BLAST of Sed0003814 vs. ExPASy TrEMBL
Match:
A0A1S3B4G3 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis melo OX=3656 GN=LOC103485898 PE=3 SV=1)
HSP 1 Score: 912.1 bits (2356), Expect = 1.2e-261
Identity = 480/636 (75.47%), Postives = 539/636 (84.75%), Query Frame = 0
Query: 1 MLSNGVGPTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASP 60
ML++GVGPTGPEDFGS +LS PSFEEYADEVRMRYVMGLQL++ELQCE LVKEF A+P
Sbjct: 115 MLNDGVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATP 174
Query: 61 VICGLAASIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHASSRHKAEPHNLYGQR 120
+ICGLAASIWLRFVTATRVFDE WAF+T+Q+SESQ D E IR S HK EPHN YGQR
Sbjct: 175 IICGLAASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQR 234
Query: 121 AVVVWIKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRI 180
VV+W+KSLRKKIPL TLAVSFLACHVAREAI PTD++KWSLEGKLPY+AAF+DIE+RI
Sbjct: 235 VVVLWVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRI 294
Query: 181 GHTSRACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVP 240
G TSRACPISSK M+RPSR QKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLA+P
Sbjct: 295 GKTSRACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALP 354
Query: 241 IDECLPLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS 300
+D+ LP ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILII MR+LYNLHGFGEWEKSLS
Sbjct: 355 VDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLS 414
Query: 301 INCASSSPPNQKSHSNPGSSF-----DSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIE 360
+NCAS PPNQK+HS+P ++F DSEN P F SH++DNP VS + P +T E
Sbjct: 415 VNCASYFPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSP-----ENPHLTTTE 474
Query: 361 FLHKIEARYHEITETYEYSKDLPTYLLHCKDVVFAGLESM-LENHGEERIIEQLWKYYQN 420
FL KIEARYHEI ETYEYSKDLP+YL +CKDVVFAG ES+ +++H E+++IE+LW YYQN
Sbjct: 475 FLRKIEARYHEIAETYEYSKDLPSYLQYCKDVVFAGSESLFIDDHEEQKMIEKLWNYYQN 534
Query: 421 EKDTQQAEDVDQNAASNQKRLREGSNDRSSNESKKSR-NEDHFSDESFDNKTESNNSQQS 480
EKD Q EDVDQN ASN KRLREGSNDR S+ESKK + ED S ES +N+T S +S+QS
Sbjct: 535 EKDHDQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGEEDCISGESSNNRTGSIDSRQS 594
Query: 481 HSSKRSENA---DEELSSKDK-ASTPTSIDEAIKRLKLDMEEKRFCYIPPRVNPKRFDYL 540
HSSK EN+ D+E SS+DK AS+ TSI+EAI++LKLDMEEKRFCYIPPR NPKRF YL
Sbjct: 595 HSSKSLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRANPKRFGYL 654
Query: 541 HYSRKIDGGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLN 600
HYSRKID GALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLE RIH +L
Sbjct: 655 HYSRKIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKTLR 714
Query: 601 LTPSSVSCEFCSDVGPEHTIDDSIGLDSIGLSDLNI 626
LTPSSV+CEFCSDV P H +DS+GLSDL+I
Sbjct: 715 LTPSSVTCEFCSDV-PNH-------IDSVGLSDLDI 737
BLAST of Sed0003814 vs. TAIR 10
Match:
AT2G02955.1 (maternal effect embryo arrest 12 )
HSP 1 Score: 421.4 bits (1082), Expect = 1.3e-117
Identity = 258/608 (42.43%), Postives = 357/608 (58.72%), Query Frame = 0
Query: 8 PTGPEDFGSDGLLSAAPSFEEYADEVRMRYVMGLQLMLELQCEALVKEFNASPVICGLAA 67
PT P DF ++ L S+E Y DE R RYV +M+ QC+ALV +FN +P+I GL
Sbjct: 111 PTEPVDFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVG 170
Query: 68 SIWLRFVTATRVFDEGWAFETIQDSESQYQDPENIRHAS--SRHKAEPHNLYGQRAVVVW 127
I LR+V + V+ + WA I+DSE Q +D E ++ A RHKAEP N+ G+RAV +W
Sbjct: 171 PISLRYVALSGVYHKDWANNAIRDSEHQSEDGE-VKDAKRLKRHKAEPRNIDGKRAVTIW 230
Query: 128 IKSLRKKIPLSYTLAVSFLACHVAREAIFPTDMMKWSLEGKLPYFAAFIDIENRIGHTSR 187
L+K +PLS +L +SFLACH A + PTD+++W+ EGKLPY + F+DI ++G S
Sbjct: 231 FGILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSA 290
Query: 188 ACPISSKHMYRPSRFPPPQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLAVPIDECL 247
ACP+ M RP + Q LE+ A+ IA TIGL LPPVNF+ IA Y+ +L++P D+ L
Sbjct: 291 ACPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKIL 350
Query: 248 PLACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIVMRILYNLHGFGEWEKSLS-INCA 307
LA I WS+PP+L+LSTNE +LPSRVCVMSILI+ +R+LYN++G G WE+SL +N +
Sbjct: 351 DLARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNAS 410
Query: 308 SSSPPNQKSHSNPGSSFDSENGPRFASHNMDNPYVSSKYSHLQKPEMTAIEFLHKIEARY 367
+ + FD++ E L +EA+Y
Sbjct: 411 DGDSETNSGTAEKATEFDTQ------------------------------ELLKNLEAKY 470
Query: 368 HEI-TETYEYSKDLPTYLLHCKDVVFAGLESMLENHGEE--RIIEQLWKYYQNEKDTQQA 427
HE+ ET E KDL +YL K+ FAGLE E+ ++ RI++ LW Y ++D +
Sbjct: 471 HEVAAETLESEKDLVSYLSLGKNEFFAGLE---EDSPDDTYRIVDNLWNGYPKDEDIE-- 530
Query: 428 EDVDQNAASNQKRLREGSNDRSSNESKKSRNEDHFSDESFDNKTESNNSQQSHSSKRSEN 487
KR R+ +D S N+ +D++ N+ S SS+R+E+
Sbjct: 531 --------CLPKRGRDWDDDVSLNQL-----------SLYDSRFSDGNNPCSSSSRRNES 590
Query: 488 A----DEELSSKDKASTPTSIDE-AIKRLKLDMEEKRFCYIPPRVNPKRFDYLHYSRKID 547
D S ++S+P + E AIKRL DM + FCYIPPRV KR DYL Y RK +
Sbjct: 591 VSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQYVRKKE 650
Query: 548 GGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLESRIHHSLNLTPSSVS 605
GAL YAAHADYYILLR CA+ A++D+R MH GVLS E+RL+W+E RI L+LT ++
Sbjct: 651 DGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLTRPLMT 658
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023536820.1 | 5.3e-291 | 82.38 | TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... | [more] |
KAG7020963.1 | 4.5e-290 | 82.22 | TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... | [more] |
XP_022965475.1 | 9.9e-290 | 82.06 | TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... | [more] |
XP_022937641.1 | 1.2e-287 | 81.75 | TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita... | [more] |
XP_022149924.1 | 1.4e-283 | 81.04 | TATA box-binding protein-associated factor RNA polymerase I subunit B [Momordica... | [more] |
Match Name | E-value | Identity | Description | |
Q5XVF0 | 1.8e-116 | 42.43 | TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabido... | [more] |
Q5W770 | 1.2e-96 | 38.33 | TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s... | [more] |
B8AX23 | 1.6e-96 | 38.33 | TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HNT6 | 4.8e-290 | 82.06 | TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi... | [more] |
A0A6J1FAY0 | 5.9e-288 | 81.75 | TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi... | [more] |
A0A6J1D8G5 | 6.7e-284 | 81.04 | TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordi... | [more] |
A0A0A0LHI6 | 7.7e-264 | 75.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074100 PE=3 SV=1 | [more] |
A0A1S3B4G3 | 1.2e-261 | 75.47 | TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis... | [more] |
Match Name | E-value | Identity | Description | |
AT2G02955.1 | 1.3e-117 | 42.43 | maternal effect embryo arrest 12 | [more] |