Sed0003723 (gene) Chayote v1

Overview


Name	Sed0003723
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-binding protein
Location	LG07: 2931233 .. 2935984 (+)
RNA-Seq Expression	Sed0003723
Synteny	Sed0003723

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCAAAAGGTTGAAATTCAACTATTAGTTCTAATCATACAAAATCCCATTTAAGGGTCGATGTTGCAATAATTTAATTGTTGAGTGAATTAGTTCAACACTAGTGTTGCGGGTTCGAGTCCGACAATCGGTATTTCTCCCTTGTATTCCAAAAAAAAGAAAAAGAAATCTAGAATGATCGAGAAGGATGCATAGAATAGAACCAGAAATCGAACACCGAAAATGGTGAAATTGCTTGCAGCACCGAAACAATGGCGGAATTTTCCATAGCTCTCTCCTTTTGCTTCATTTTCTTCTCTGCAATCTCTGAAGCATCCCGTTGCTCCATCACTGGTACGTACTTTTCTTCTTCAATCTTCAGCCCTAAGCTTCCTTATAGTTCTTGCTTCATCGTTTCGCTGTTCTACTCTGAAAACGTCGAGTTCTATCATCTTTTAGGGATTTATTTCGAATTTACTAGGCCGCAATCTGGTCGATGTATTCCTTCAATTTTCTCACATAGAATTTGTAAGGATTTTGATAACTGAAGAGGGAAATTGGATAAGGGTGAAGGATAGAACGAAATGATGGCAGCTGAGTTAATCTTCGATTTTTAATGATGGTTTACCACGAAGAGGAATCTTTGTATAGGCACAACCGAAAGATATCCATGAAATTGGTCTCAGTTTTTCCACGATTGCCTTCACTGGTTATGGGGATTTGCATCTTTGCAGCTTTTAATTCTCCCAAGTTTTGGGTTGTGTTCTCATATTAGAATTATGATGTGGGTTTTAAGGTATGCTCCCCTCAAGCTTTAGGTTACTCGCGTGTAATATTAATTTGTATTTGTAGACTCCTCCATGTCTCCATTCATATCTTCAGTGTCAAGCCTAGGGATGGGTGCGGTTACCCCAGGTGTAGTGGAGCGAAGCTCCGATTTTTCAGTTTCCTAAAAAATTAGAGTTATGGTGTTCTTTCGTTTCAGGGTATTTGAATATTGAGCATATTATGTCTAGATAGCATTGGGGATAAAGAGCTACACGTTTACTACTGAACTAATAGATGTTCTGATTCGATTTATGTCTTGAAATTGTTGCATTTGCATATGAACATATCTATGTCTCGAGCATTTGGATTTGGATCTTATTGTTTTGATGTGTACTTGAGAACTGTACTTTATTTACCCGACCGGCTTCTGTATGGTAGTTCACATTTTTTGTTCTTTCTAAATACATCTAGGGTTTTTTCCTTAATGCACAGGGTTGCCCCTGGTGAGAAATATTAGTGAGCTTCCACAAGATAACTTTGGAAGAGGGGGCTTGTCTCACATTACCCTTGCAGGTTCATTATTGCATGGGTTGAAGGAGGTATGTTGTGTTCATCCTTCAAGTTTCTAGAACCTAGTTAAGATCAAGCTATGTGAAAGAAGAAACAAAGATATATTTATTGGCTTGTTCTAGCTTTTTATCGCTCTACTCTATGGGCTTTTACAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCATACACACCCATTCACAGGCACTCGTGTGAAGAAGTTTTCGTGGTTCTAAAGGGGACTGGCTCGCTTTATCTCGCTCCTAATTCTCATGAAAAGTACCCTGGAACACCAAAGGAATTTTCTATCCATTCAAACAGTACATTTTTCATACCTGTTAATGATGCTCACCAGGTACGTTGATCTGCTTAAATCTCCTCATTGCTTCAGAATTATCCATATATTTTGTGGGCTTAGTTGATGTACATCATTTTTGCTTGCTTACTAATTTTTAGGATAGTAAACTCAAGAATTTCATATGAGGTCTCAAGTCTCAAATGTCTGTGCCAGATACATCAATGACCCGTCTTGCTAAATCTTGATTTTTTTTTAATAGGAAACCTGATTAATGAAAGAACAAAAATGTTCATTGAAACATTAAGGGGGTGTTTGGGATTTGGTGCTGGGGAGAGGAGGGGAAGGAGAAATCAAAACTCCATGTTTGTTTTTAGGTTATCAACTTCTCCTCAATCTTTCCTCTAATATTACATCAAATTTTTTATATAGTCCTTTAAATGTCACATCAAACCTTTTTTTTTTAATCTTCAACCATATAATATAATATAAATATATTTTATCTAATCTTATCAAATATCACATCAAACTTTCTTTTATTTTCAACCACACAATATAAAATAAAATATATTATATTTATCAATCAATTCAAAATCTACCATCATTACATAATAAAAAATCAATATAAAATAAATACTTTTACAACATCTCCTCTCAAAAACATCAATTTTCAAACAACTACTTTATATCCTCAAATCACTCCACTTCCTCTTTTTCTTCAACTTTCCCTCCTCTCCTCTTTCCAACACCAAAATCCAATCATCCCCTAAGATGTTGCCAATGTGTAAATAAATAGGCTAGGCCATAGTTACAAAAAGGAGATAGCCTATGACTCCAAAAAATTCCATCATGTAAAGTTGATTAACTGAGTGAAGCGAGGGAAGCTTTGGCATCTTTGAAAATCCGGTTGTTTCTTTCTCCCACCAATTCCAGAAAAAAACATCAACAATGTCTTGCTAAATCTTTAGAACTCTTGTTGCCATTGCAAAGAGTATTTGAAAGCTTATGGAGAACTTTTTCCTGAAAGTTGGAGAGGTTCAGTGGGTTCTTTCATTGTTTGGTGAAGTCAGGTGTAGTATCCACTGGTTAGGTATCGGGGTTCGGTTGAGATGGATAGCTAACTTGGGTTGAGATACTTGGATAAGATGGATTAAAGTGAATGCAACAACCAGGAAATATAGCAAAACAAAGTTAAAGATTAACATTATTCAATTAAATTAACTCCCAGAAAAAACACTCAAAAGAAGACATAATAGCTGAATTCATTCCTCCTTTGTCAACTAAAAGCCAGGGAAAGTGCCAAAGTAATCCCATTCCCATTTCAAGGGAAAACTGCTGTTTATGGGATGGAGGGTGTATTTGCTCTTGGAATGGAATTTGGTTTCCCCCCCTTTGTGTTCCATATAGAAAAAAACTCAAAAAAGAATGGGATTATAGCTATAAGCCTATATATTCCTCTCCTTTTAGTGGAACAAAGAATCATGAAATCTGGCTTAGATGAAACCTTATCCAGTGATCTGTGAACTGTAAACCAATGTTCCTGGGATCAGATCAAACCACTGGCCACGCTTCAGCCCCTGCTCCCAACTATTTTCTCTATCAATTGAGGCGTTCTTGTGATTAATTTGGTATTCGAAAACATCGAAGTACTTGACTTAGATAAGAGAAAATAGTTGAGAGTATCAAAGATATTTTTTTTTTGATATGTGTGACTGTCCGGGCCAGCTTGTGCACACTTCAACCTTAACTCTACAATATTTGGATGTTAAAAAACTTGTAGGAAATTAATTTTTAGGTAGTCAGCTACCAACTCATCACCTCTTAACTCCCTAAGGTCCTCTTGACCATAGACCTTATTTGGTTTTTTCCTTTCCAAAAAAATATTTTCAGTTTAGAATTTCTACCACTGTGGTTGTAGTTCTCAACTTGAGCCAAGCCTCTGGTTTCACTTGAATGTTTAACCATTTATACAGGTATGGAATACGAACGAACATGAGGATTTACAGGTGCTTGTTATCATTTCCAGGCCACCAGTCAAAGTGTGCGTATTGTGTTTTTCCATTTTCATTCTATATTTCATCTTTATTTGTTTATAATTGATTATAGTGTAATTTAAAGAAGCTTATTCATTGGTCTTAATGAATTATACACATTTAATCACAAATACACATACACAAACACACATCAATGCAGAAAAAAAAAAAAAAAAAAAAACCTTTGAACTTTGGGGTTGTATTAAGTAGAACCTCAAACTAATAATTGCGTGAATTTAAACCCGAACTTTCAAAAGTGAATTTTGGTCCATTTAAAATCAGCAAATTTATCATGTAAATTTTTCTAAATAAGTAAAGAAAAGGTTGAAGAAAAAAAAAGAAAGATGAAAAACCACCTATATAAGCAAAATCCACTCATATTCCTTTGGTTATGGTATTTCTATCTTGCATATCATTAATCATTACATTTAAAATAGTCTTATAAGTGTGTTCTATGACCTAGAGGTTATGAGTTCGAATTTTTCCACCTTAATTGAAAAAGAATCGTTTGAGAATTATGTATTAACCGTTTTCAAACGAAATCCTAATGAAGAGTTAATTGATTCACAGATGGAAGTTTAAATTTTTAATTGATACAACCTCCCAAGTTAATTTTCCTCTAAATACACGGATCTTTTGAGCAGCTATTTCAAGCTGTTTTGTGGGGCTGTTTGGGGTTTAAGACTCTTGGACAACCAAGATACTATTGGTTTAGACAAAGGAACAAACACTGCAAAATGCCAAATACATTGATCTCACTTATGTATTTATAATTAATTTTGTGGTTTGGTTGCAGGTTTATTTATAATGACTGGTTCATGCCCCACACTGCTGCAAAGTTGAAGTTCCCCTTCTTTTGGGATGAACAGTGTTTTGAAGCGCCTGTGAAGGATGAACTTTGATGTTCTATCAAACTTGATTTGTTTTTACCTTTGACATTGAAGTATAAGTTCAGATCTCCAGAAACCTGTGGAAAATAAGGGTGTATTTCTCGTGTTTAGACTATCAAATTCATTCTTTCCATAATCACATGTTTCAAAATCTACATTTTCATTCTCCTCTTAATTACTTTTGATTTTTTCCACAACTTTTTATCAACTAC

mRNA sequence

CTTTCAAAAGGTTGAAATTCAACTATTAGTTCTAATCATACAAAATCCCATTTAAGGGTCGATGTTGCAATAATTTAATTGTTGAGTGAATTAGTTCAACACTAGTGTTGCGGGTTCGAGTCCGACAATCGGTATTTCTCCCTTGTATTCCAAAAAAAAGAAAAAGAAATCTAGAATGATCGAGAAGGATGCATAGAATAGAACCAGAAATCGAACACCGAAAATGGTGAAATTGCTTGCAGCACCGAAACAATGGCGGAATTTTCCATAGCTCTCTCCTTTTGCTTCATTTTCTTCTCTGCAATCTCTGAAGCATCCCGTTGCTCCATCACTGGGTTGCCCCTGGTGAGAAATATTAGTGAGCTTCCACAAGATAACTTTGGAAGAGGGGGCTTGTCTCACATTACCCTTGCAGGTTCATTATTGCATGGGTTGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCATACACACCCATTCACAGGCACTCGTGTGAAGAAGTTTTCGTGGTTCTAAAGGGGACTGGCTCGCTTTATCTCGCTCCTAATTCTCATGAAAAGTACCCTGGAACACCAAAGGAATTTTCTATCCATTCAAACAGTACATTTTTCATACCTGTTAATGATGCTCACCAGGTATGGAATACGAACGAACATGAGGATTTACAGGTGCTTGTTATCATTTCCAGGCCACCAGTCAAAGTGTTTATTTATAATGACTGGTTCATGCCCCACACTGCTGCAAAGTTGAAGTTCCCCTTCTTTTGGGATGAACAGTGTTTTGAAGCGCCTGTGAAGGATGAACTTTGATGTTCTATCAAACTTGATTTGTTTTTACCTTTGACATTGAAGTATAAGTTCAGATCTCCAGAAACCTGTGGAAAATAAGGGTGTATTTCTCGTGTTTAGACTATCAAATTCATTCTTTCCATAATCACATGTTTCAAAATCTACATTTTCATTCTCCTCTTAATTACTTTTGATTTTTTCCACAACTTTTTATCAACTAC

Coding sequence (CDS)

ATGGCGGAATTTTCCATAGCTCTCTCCTTTTGCTTCATTTTCTTCTCTGCAATCTCTGAAGCATCCCGTTGCTCCATCACTGGGTTGCCCCTGGTGAGAAATATTAGTGAGCTTCCACAAGATAACTTTGGAAGAGGGGGCTTGTCTCACATTACCCTTGCAGGTTCATTATTGCATGGGTTGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCATACACACCCATTCACAGGCACTCGTGTGAAGAAGTTTTCGTGGTTCTAAAGGGGACTGGCTCGCTTTATCTCGCTCCTAATTCTCATGAAAAGTACCCTGGAACACCAAAGGAATTTTCTATCCATTCAAACAGTACATTTTTCATACCTGTTAATGATGCTCACCAGGTATGGAATACGAACGAACATGAGGATTTACAGGTGCTTGTTATCATTTCCAGGCCACCAGTCAAAGTGTTTATTTATAATGACTGGTTCATGCCCCACACTGCTGCAAAGTTGAAGTTCCCCTTCTTTTGGGATGAACAGTGTTTTGAAGCGCCTGTGAAGGATGAACTTTGA

Protein sequence

MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHGLKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNSTFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCFEAPVKDEL

Homology

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BLAST of Sed0003723 vs. NCBI nr
Match: XP_038896169.1 (auxin-binding protein T85 [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94
Identity = 165/188 (87.77%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA  S+ALSFC IF  AISEASRCSI GLPLVRNISELPQDN+GRGG SHIT+AGSLLHG
Sbjct: 3   MAGLSLALSFCLIFLFAISEASRCSIIGLPLVRNISELPQDNYGRGGFSHITVAGSLLHG 62

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTG+LYLAP+SHEKYPGTPKEF I+SNS
Sbjct: 63  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHEKYPGTPKEFPIYSNS 122

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQVWNTNEHEDLQ+L IISRPP KVFIY+DWFMPHTAA+LKFP++WDEQCF
Sbjct: 123 TFLIPVNDAHQVWNTNEHEDLQMLAIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 182

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 183 EAPVKDEL 190

[Close]

BLAST of Sed0003723 vs. NCBI nr
Match: XP_022150242.1 (auxin-binding protein T85 isoform X2 [Momordica charantia])

HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94
Identity = 165/188 (87.77%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA   +AL FC IFF AISEASRCSITGLPLVRNISELPQDN+GRGGLSHIT+AGS+LHG
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVFVVLKGTG+LYLAP SHEKYPGTPKEFSI+SNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYSNS 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IP+NDAHQVWNTNEHEDLQ+LVIISRPP KVFIYNDW MPHTAA+LKFP+ WDEQCF
Sbjct: 121 TFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQCF 180

Query: 181 EAPVKDEL 189
           E PVKDEL
Sbjct: 181 EPPVKDEL 188

[Close]

BLAST of Sed0003723 vs. NCBI nr
Match: XP_022992557.1 (auxin-binding protein T85 [Cucurbita maxima])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 162/188 (86.17%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA  S+ALS C IF  AISEASRCSI GLPLVRNISELPQDN+GRGGLSHIT+AGSLLHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVFVVLKGTG+L+LAP+SH KYPGTPKEFSI+SN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQ+LVIISRPP KVFIY+DW MPHTAA+LKFP++WDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Sed0003723 vs. NCBI nr
Match: XP_008451403.1 (PREDICTED: auxin-binding protein T85 [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 5.8e-92
Identity = 165/189 (87.30%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA FS ALSFC IF  AI+EASRCSI GLPLVRNISELPQDN+GRGGLSHIT+AGSLLHG
Sbjct: 1   MAGFSFALSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVFVVLKGTG+LY AP+SHEKYPGTPKEF I+SNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQV NTNEHEDLQ+LVIISRPP KVFIY+DWFMPHTAA+LKFP++WDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EA-PVKDEL 189
           EA PVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Sed0003723 vs. NCBI nr
Match: XP_022953527.1 (auxin-binding protein T85 [Cucurbita moschata] >KAG6575883.1 Auxin-binding protein T85, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.8 bits (891), Expect = 5.8e-92
Identity = 161/188 (85.64%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA  S+ALS C IF  AISEASRCSI GLPLVRNISELPQDN+GRGGLSHIT+AGSLLHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVF+VLKGTG+L+LAP+SH KYPGTPKEFSI+SN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQ+LVIISRPP KVFIY DW MPHTAA+LKFP++WDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Sed0003723 vs. ExPASy Swiss-Prot
Match: P33490 (Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 7.6e-79
Identity = 132/177 (74.58%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 13  IFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHGLKEVEVWLQTFS 72
           +   A +EAS+CSI GLPLVRNISELPQ+N+GR GLSH T+AGS+LHG+KE+EVWLQTF+
Sbjct: 11  VLLFATAEASQCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFA 70

Query: 73  PGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNSTFFIPVNDAHQV 132
           PGS TPIHRHSCEE+FVVLKG G LYL P+SH KYPG P+EF I  NSTF IPVND HQV
Sbjct: 71  PGSRTPIHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQV 130

Query: 133 WNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCFEAPV-KDEL 189
           WNT EHEDLQVLV+ISRPPVKVF+Y+DW MPHTAAKLKFP++WDE+C++    KDEL
Sbjct: 131 WNTGEHEDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWKDEL 187

[Close]

BLAST of Sed0003723 vs. ExPASy Swiss-Prot
Match: P33491 (Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.4e-77
Identity = 129/177 (72.88%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 13  IFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHGLKEVEVWLQTFS 72
           +F+ A +EAS CSI GLPLVRNISELPQ+N+GR GLSH T+AGS+LHG+KE+EVWLQTF+
Sbjct: 11  VFWFATAEASHCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFA 70

Query: 73  PGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNSTFFIPVNDAHQV 132
           PG  TPIHRHSCEE+F+VLKG G+LYL P+SH KYPG P+EF I  NSTF IPVND HQV
Sbjct: 71  PGFRTPIHRHSCEEIFIVLKGQGTLYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQV 130

Query: 133 WNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCFEAPV-KDEL 189
           WNT E EDLQVL +ISRPPVKVF+Y+DW MPHTAAKLKFP++WDE+C++    KDEL
Sbjct: 131 WNTGEQEDLQVLDVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSRKDEL 187

[Close]

BLAST of Sed0003723 vs. ExPASy Swiss-Prot
Match: P33487 (Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.4e-72
Identity = 129/185 (69.73%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 4   FSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHGLKE 63
           FS+AL     +FS  S  + C I GLP+VRNIS+LPQDN+GR GLSH+T+AGS+LHG+KE
Sbjct: 18  FSVAL--LLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKE 77

Query: 64  VEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNSTFF 123
           VE+WLQTF+PGS TPIHRHSCEEVFVVLKG+G+LYLA  +H  +PG P EF I +NST  
Sbjct: 78  VEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIH 137

Query: 124 IPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCFEAP 183
           IP+NDAHQV NT  HEDLQVLVIISRPP+K+FIY DWFMPHTAA+LKFP++WDEQC +  
Sbjct: 138 IPINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQES 197

Query: 184 VKDEL 189
            KDEL
Sbjct: 198 QKDEL 198

[Close]

BLAST of Sed0003723 vs. ExPASy Swiss-Prot
Match: P33488 (Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.3e-64
Identity = 114/158 (72.15%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 31  LVRNISELPQDNFGRGGLSHITLAGSLLHGLKEVEVWLQTFSPGSYTPIHRHSCEEVFVV 90
           LVR+IS + Q N+GR G SHIT+ G+L HG KEVEVWLQTF PG  TPIHRHSCEEVF+V
Sbjct: 49  LVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108

Query: 91  LKGTGSLYLAPNSHEKYPGTPKEFSIHSNSTFFIPVNDAHQVWNTNEHEDLQVLVIISRP 150
           LKG G+L L  +S  KYPG P+E  +  N+TF IPVND HQVWN+NEHEDLQVLVIISRP
Sbjct: 109 LKGKGTLLLG-SSSLKYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRP 168

Query: 151 PVKVFIYNDWFMPHTAAKLKFPFFWDEQCFEAPVKDEL 189
           PVK+FIY+DW MPHTAAKLKFP+FWDE C  AP KDEL
Sbjct: 169 PVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAP-KDEL 204

[Close]

BLAST of Sed0003723 vs. ExPASy Swiss-Prot
Match: P13689 (Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.0e-62
Identity = 112/158 (70.89%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 31  LVRNISELPQDNFGRGGLSHITLAGSLLHGLKEVEVWLQTFSPGSYTPIHRHSCEEVFVV 90
           LVR+IS++PQ ++G  GLSHIT+AG+L HG+KEVEVWLQT SPG  TPIHRHSCEEVF V
Sbjct: 46  LVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTV 105

Query: 91  LKGTGSLYLAPNSHEKYPGTPKEFSIHSNSTFFIPVNDAHQVWNTNEHEDLQVLVIISRP 150
           LKG G+L L  +S  KYPG P+E     N+TF IPVND HQVWN++EHEDLQVLVIISRP
Sbjct: 106 LKGKGTL-LMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRP 165

Query: 151 PVKVFIYNDWFMPHTAAKLKFPFFWDEQCFEAPVKDEL 189
           P K+F+Y+DW MPHTAA LKFPF WDE CFEA  KDEL
Sbjct: 166 PAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEA-AKDEL 201

[Close]

BLAST of Sed0003723 vs. ExPASy TrEMBL
Match: A0A6J1DA75 (auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018456 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.3e-94
Identity = 165/188 (87.77%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA   +AL FC IFF AISEASRCSITGLPLVRNISELPQDN+GRGGLSHIT+AGS+LHG
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVFVVLKGTG+LYLAP SHEKYPGTPKEFSI+SNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYSNS 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IP+NDAHQVWNTNEHEDLQ+LVIISRPP KVFIYNDW MPHTAA+LKFP+ WDEQCF
Sbjct: 121 TFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQCF 180

Query: 181 EAPVKDEL 189
           E PVKDEL
Sbjct: 181 EPPVKDEL 188

[Close]

BLAST of Sed0003723 vs. ExPASy TrEMBL
Match: A0A6J1JQ76 (auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.6e-93
Identity = 162/188 (86.17%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA  S+ALS C IF  AISEASRCSI GLPLVRNISELPQDN+GRGGLSHIT+AGSLLHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVFVVLKGTG+L+LAP+SH KYPGTPKEFSI+SN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQ+LVIISRPP KVFIY+DW MPHTAA+LKFP++WDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Sed0003723 vs. ExPASy TrEMBL
Match: A0A6J1GNG5 (auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.8e-92
Identity = 161/188 (85.64%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA  S+ALS C IF  AISEASRCSI GLPLVRNISELPQDN+GRGGLSHIT+AGSLLHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVF+VLKGTG+L+LAP+SH KYPGTPKEFSI+SN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQ+LVIISRPP KVFIY DW MPHTAA+LKFP++WDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Sed0003723 vs. ExPASy TrEMBL
Match: A0A1S3BS71 (auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.8e-92
Identity = 165/189 (87.30%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA FS ALSFC IF  AI+EASRCSI GLPLVRNISELPQDN+GRGGLSHIT+AGSLLHG
Sbjct: 1   MAGFSFALSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVFVVLKGTG+LY AP+SHEKYPGTPKEF I+SNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQV NTNEHEDLQ+LVIISRPP KVFIY+DWFMPHTAA+LKFP++WDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EA-PVKDEL 189
           EA PVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Sed0003723 vs. ExPASy TrEMBL
Match: A0A0A0K905 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.0e-91
Identity = 163/189 (86.24%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAEFSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHG 60
           MA FS+ALSFC IF  AI+EASRCSI G+PLVRNISELPQDN+GRGGLSHIT+AGSLLHG
Sbjct: 1   MAVFSLALSFCSIFLFAIAEASRCSIIGVPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNS 120
           LKEVEVWLQTFSPGS+TPIHRHSCEEVFVVLKGTG+LY AP+SHEK PGTPKEF I+SNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKCPGTPKEFPIYSNS 120

Query: 121 TFFIPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCF 180
           TF IPVNDAHQV NTNEHEDLQ+LVIISRPP KVFIY+DWFMPHTAA+LKFP++WDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EA-PVKDEL 189
           EA PVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Sed0003723 vs. TAIR 10
Match: AT4G02980.1 (endoplasmic reticulum auxin binding protein 1 )

HSP 1 Score: 273.1 bits (697), Expect = 1.7e-73
Identity = 129/185 (69.73%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 4   FSIALSFCFIFFSAISEASRCSITGLPLVRNISELPQDNFGRGGLSHITLAGSLLHGLKE 63
           FS+AL     +FS  S  + C I GLP+VRNIS+LPQDN+GR GLSH+T+AGS+LHG+KE
Sbjct: 18  FSVAL--LLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKE 77

Query: 64  VEVWLQTFSPGSYTPIHRHSCEEVFVVLKGTGSLYLAPNSHEKYPGTPKEFSIHSNSTFF 123
           VE+WLQTF+PGS TPIHRHSCEEVFVVLKG+G+LYLA  +H  +PG P EF I +NST  
Sbjct: 78  VEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIH 137

Query: 124 IPVNDAHQVWNTNEHEDLQVLVIISRPPVKVFIYNDWFMPHTAAKLKFPFFWDEQCFEAP 183
           IP+NDAHQV NT  HEDLQVLVIISRPP+K+FIY DWFMPHTAA+LKFP++WDEQC +  
Sbjct: 138 IPINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQES 197

Query: 184 VKDEL 189
            KDEL
Sbjct: 198 QKDEL 198

The following BLAST results are available for this feature:

BLAST of Sed0003723 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896169.1	4.7e-94	87.77	auxin-binding protein T85 [Benincasa hispida]	[more]
XP_022150242.1	4.7e-94	87.77	auxin-binding protein T85 isoform X2 [Momordica charantia]	[more]
XP_022992557.1	2.0e-92	86.17	auxin-binding protein T85 [Cucurbita maxima]	[more]
XP_008451403.1	5.8e-92	87.30	PREDICTED: auxin-binding protein T85 [Cucumis melo]	[more]
XP_022953527.1	5.8e-92	85.64	auxin-binding protein T85 [Cucurbita moschata] >KAG6575883.1 Auxin-binding prote...	[more]

BLAST of Sed0003723 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33490	7.6e-79	74.58	Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1	[more]
P33491	2.4e-77	72.88	Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1	[more]
P33487	2.4e-72	69.73	Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1	[more]
P33488	5.3e-64	72.15	Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1	[more]
P13689	5.0e-62	70.89	Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1	[more]

BLAST of Sed0003723 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DA75	2.3e-94	87.77	auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1JQ76	9.6e-93	86.17	auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1	[more]
A0A6J1GNG5	2.8e-92	85.64	auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=...	[more]
A0A1S3BS71	2.8e-92	87.30	auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1	[more]
A0A0A0K905	4.0e-91	86.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1	[more]

BLAST of Sed0003723 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02980.1	1.7e-73	69.73	endoplasmic reticulum auxin binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000526	Auxin-binding protein	PRINTS	PR00655	AUXINBINDNGP	coord: 160..179 score: 80.45 coord: 73..97 score: 82.55 coord: 138..160 score: 84.58 coord: 30..49 score: 70.0 coord: 117..132 score: 71.02 coord: 50..70 score: 78.35 coord: 104..117 score: 56.49
IPR000526	Auxin-binding protein	PFAM	PF02041	Auxin_BP	coord: 21..188 e-value: 1.3E-95 score: 317.7
IPR000526	Auxin-binding protein	PANTHER	PTHR37236	AUXIN-BINDING PROTEIN 1	coord: 7..188
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 24..188 e-value: 1.9E-64 score: 217.8
None	No IPR available	PANTHER	PTHR37236:SF1	AUXIN-BINDING PROTEIN 1	coord: 7..188
None	No IPR available	CDD	cd02220	cupin_ABP1	coord: 30..181 e-value: 1.76343E-112 score: 315.123
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 29..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003723.1	Sed0003723.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0051781	positive regulation of cell division
biological_process	GO:0045793	positive regulation of cell size
biological_process	GO:0032877	positive regulation of DNA endoreduplication
biological_process	GO:0009826	unidimensional cell growth
cellular_component	GO:0005788	endoplasmic reticulum lumen
molecular_function	GO:0010011	auxin binding