Sed0003665 (gene) Chayote v1

Overview


Name	Sed0003665
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor bHLH84-like
Location	LG13: 3024975 .. 3026884 (-)
RNA-Seq Expression	Sed0003665
Synteny	Sed0003665

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACATATAGGAGCCATTTCAGAAAGGGAATGGATCTCTTTGAGTGGAACATATACAGCTGAGGAATCTGATTTTATGGCTAATTTTCTCAATAATTATTGTCTTCCAAATGAGCTAATTAACTCAGATTTGAGCTTAGAAATCTCATCTAATTATTGGGTTGCCAATGAACAAACATCATTGTCCATCGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATGTATGGCCACCCTCTTTGGTTCCCCAATGGTGCCTCTTTCTCCTACGAGGGTGTCGGGAATCCCGACAACGGTTCGAGTCGAAAAACAAACCAATGCAGGCTACAACATTCCCCTACTGACCCTGCTGCTTGTGTCAATGAGAGGAGTTTACAGCTTAAGAGGAAAGCAGAGGAGGACGAAGCTACGAGAGACGAGAAAGTTGCGCTGATGTCAGTTGACGACAAGTCAAAGAAGCGATCCCGGAGTTTACCTGATGTAAGATTGATTATATGACTGTTTGTTTGTTTGTTTGTTTTTGTTTTTAAGATCCTAATGGTGTTATGGTTTTTGTGATTTGGTGATGTAGGTTGAAAAGTCGAAGAGGAGCGGGAGGGCACCGAAAATCCCAAAGCTTTCTTCGGCTAGCTGCAACCAAGAGGATCACATTGTTAGTCCAAATGGGCAGTGCACAAGCAGCTTCAGCTCTGAGGATGAGTGTAATGAAGTTCAAGAAATCAATGGTGGAATTACTTCAAGTGAAAACTCAAAAGGAAAGTCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCTAGGGTAACCCTCTAAATCACACCCCTGTTTATTCTTTTCCCTTTCCGAACACCAGACCAAAAATACACTAGTTTACATAATTCACTAACGTTGTGTTAGCTACATCCATAAACAGAAAAGAGAAACAATTTTATTAAAGATAAGAATGCAAATGGTTGATAAGAGAGTTTATATAGTGGACCTCATAGAACATTATTTGCCTCAACTACATAAAGTTCAACACAAAAAAATATGAATGAAACAAAAAACTTAGGTCCCATTCTATAACCATTTGATTTTTTGTTTTCGGTTTTTGAAATTTAAGCCTACAATAACTAGTTTACCATATGTTTTTTCTTACCTATATTTATAGAAACTAAACCAAAATTTGAAAATATAGAAAGTAGCTTCCAAAAATTTGTTCTTGTTAATAAAAATTGATTAGCATTCACATACTTTCTCAAGAAAAGATGGATACAATGTAGGAAAAGTGAAACACATATAGGATGAGTAAGAATAGGCTTAAATTTCAAAAAACAAAAAAAAAAAAAATTGGTTATCAAACGAGACCTTAGTGTTCGTAGTGCAACATAGTTCAAAACATTTCAATCTCTATACATCACTGAAAACAAAAAACTTAAAACTAAATTGCAACTCTGTTCCTTTTTTTTTTTCAGAAAAGAAGAGAAAGGATCAATGAGAGGTTGAGAATCTTACAAAGCCTCGTCCCGAACGGCACAAAGGTAAGACGATATATCTCACGATCATGTTACGAACGATATCGCGGTGTTTTAATTGTTGGCATAAGTTTCATTCCATCTATATCTTGGTCAACAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTTGAATATGTGAAGTTTTTGCAGCTTCAAATCAAGGTAAATGCTGATTAATGAATCATTCAAGATAATCATAACATATAATTTTGAAACCAAGGCCTAATTTTGTCATTGAATCTAATGTTTACAGTTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAATTTGAAGCTCATGAAGCATGACAATGCATCACAATAG

mRNA sequence

ATGGAACATATAGGAGCCATTTCAGAAAGGGAATGGATCTCTTTGAGTGGAACATATACAGCTGAGGAATCTGATTTTATGGCTAATTTTCTCAATAATTATTGTCTTCCAAATGAGCTAATTAACTCAGATTTGAGCTTAGAAATCTCATCTAATTATTGGGTTGCCAATGAACAAACATCATTGTCCATCGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATGTATGGCCACCCTCTTTGGTTCCCCAATGGTGCCTCTTTCTCCTACGAGGGTGTCGGGAATCCCGACAACGGTTCGAGTCGAAAAACAAACCAATGCAGGCTACAACATTCCCCTACTGACCCTGCTGCTTGTGTCAATGAGAGGAGTTTACAGCTTAAGAGGAAAGCAGAGGAGGACGAAGCTACGAGAGACGAGAAAGTTGCGCTGATGTCAGTTGACGACAAGTCAAAGAAGCGATCCCGGAGTTTACCTGATGTTGAAAAGTCGAAGAGGAGCGGGAGGGCACCGAAAATCCCAAAGCTTTCTTCGGCTAGCTGCAACCAAGAGGATCACATTGTTAGTCCAAATGGGCAGTGCACAAGCAGCTTCAGCTCTGAGGATGAGTGTAATGAAGTTCAAGAAATCAATGGTGGAATTACTTCAAGTGAAAACTCAAAAGGAAAGTCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCTAGGAAAAGAAGAGAAAGGATCAATGAGAGGTTGAGAATCTTACAAAGCCTCGTCCCGAACGGCACAAAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTTGAATATGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAATTTGAAGCTCATGAAGCATGACAATGCATCACAATAG

Coding sequence (CDS)

ATGGAACATATAGGAGCCATTTCAGAAAGGGAATGGATCTCTTTGAGTGGAACATATACAGCTGAGGAATCTGATTTTATGGCTAATTTTCTCAATAATTATTGTCTTCCAAATGAGCTAATTAACTCAGATTTGAGCTTAGAAATCTCATCTAATTATTGGGTTGCCAATGAACAAACATCATTGTCCATCGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATGTATGGCCACCCTCTTTGGTTCCCCAATGGTGCCTCTTTCTCCTACGAGGGTGTCGGGAATCCCGACAACGGTTCGAGTCGAAAAACAAACCAATGCAGGCTACAACATTCCCCTACTGACCCTGCTGCTTGTGTCAATGAGAGGAGTTTACAGCTTAAGAGGAAAGCAGAGGAGGACGAAGCTACGAGAGACGAGAAAGTTGCGCTGATGTCAGTTGACGACAAGTCAAAGAAGCGATCCCGGAGTTTACCTGATGTTGAAAAGTCGAAGAGGAGCGGGAGGGCACCGAAAATCCCAAAGCTTTCTTCGGCTAGCTGCAACCAAGAGGATCACATTGTTAGTCCAAATGGGCAGTGCACAAGCAGCTTCAGCTCTGAGGATGAGTGTAATGAAGTTCAAGAAATCAATGGTGGAATTACTTCAAGTGAAAACTCAAAAGGAAAGTCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCTAGGAAAAGAAGAGAAAGGATCAATGAGAGGTTGAGAATCTTACAAAGCCTCGTCCCGAACGGCACAAAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTTGAATATGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAATTTGAAGCTCATGAAGCATGACAATGCATCACAATAG

Protein sequence

MEHIGAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSIAAMDEPSYYSSDASDSSNMYGHPLWFPNGASFSYEGVGNPDNGSSRKTNQCRLQHSPTDPAACVNERSLQLKRKAEEDEATRDEKVALMSVDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNEVQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ

Homology

[Close]

BLAST of Sed0003665 vs. NCBI nr
Match: XP_038903006.1 (transcription factor bHLH84-like [Benincasa hispida])

HSP 1 Score: 447.6 bits (1150), Expect = 9.3e-122
Identity = 264/358 (73.74%), Postives = 287/358 (80.17%), Query Frame = 0


Query: 1   MEHIGAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANE-Q 60
           ME IGAISEREWISLSG YTAEESDFMAN LNNYCLPNEL NSDLSLEI S YW +NE  
Sbjct: 1   MEPIGAISEREWISLSGAYTAEESDFMANLLNNYCLPNEL-NSDLSLEIPSAYWASNEPP 60

Query: 61  TSLSIAAMDEPSYYSSDASDSSNMY----------------GHPLWFP-NGAS----FSY 120
            SL++AAMDEPSYYSSDASDSSN+Y                 HPLW P NGAS    FS 
Sbjct: 61  PSLTMAAMDEPSYYSSDASDSSNVYNLPPANNNNHPYTFTDSHPLWLPNNGASLSLDFSM 120

Query: 121 EGVGN-----PDNGSS-RKTNQCRLQHSPTDPAACVNERSLQLKRKAEE---DEATRDEK 180
           E VGN      DNGS+ RKT QCRLQHS  DP   +N +S Q KR+AEE   +E  RD+K
Sbjct: 121 EDVGNADCLADDNGSNVRKTRQCRLQHSSADPV--LNGKSSQPKRRAEEATMEETMRDDK 180

Query: 181 VALMSVDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQED-HIVSPNGQCTSSFSS 240
           V  +SV++ S+KRS+SL DVEK+KRS RA K  K++SASCN++D HIVSPNGQCTSSFSS
Sbjct: 181 VVPVSVENVSRKRSQSLLDVEKTKRSVRARKSSKIASASCNEDDHHIVSPNGQCTSSFSS 240

Query: 241 EDECNEVQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNG 300
           ED+CNE QEINGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNG
Sbjct: 241 EDDCNEPQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNG 300

Query: 301 TKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TKVDISTMLEEAV+YVKFLQLQIKLLSSD+LWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 301 TKVDISTMLEEAVQYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLNLKLMKQDNASQ 355

[Close]

BLAST of Sed0003665 vs. NCBI nr
Match: XP_022149290.1 (transcription factor bHLH84-like [Momordica charantia])

HSP 1 Score: 447.2 bits (1149), Expect = 1.2e-121
Identity = 264/366 (72.13%), Postives = 290/366 (79.23%), Query Frame = 0


Query: 1   MEHIGAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQT 60
           ME IGAISEREWISLSGTYTAEESDFM N L+NYCLPNEL NS LSLEI  +YW ANE +
Sbjct: 1   MESIGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNEL-NSGLSLEIPPSYWAANEPS 60

Query: 61  -SLSIAAMDEPSYYSSDASDSSNMYG--------------HPLWFPNGAS----FSYEGV 120
            +L++AAM+EPSYYSSDASDSSN+YG              HPLWFPNGAS    FS E V
Sbjct: 61  PALAMAAMEEPSYYSSDASDSSNIYGLPQGNNNPYSLNDSHPLWFPNGASLSLDFSMEDV 120

Query: 121 GN-------PDNGSSRKTNQCRLQHSPTDP--AACVNERSLQLKRKAE--EDEATRDEKV 180
           GN        DNGSS+KT QCRLQ SPT+   AA +N +S Q KR+ E   +EA RD++V
Sbjct: 121 GNDDSARLDDDNGSSQKTRQCRLQQSPTNSAVAAAINGKSSQPKRRTEVTAEEAMRDDEV 180

Query: 181 A-LMSVDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSS-ASCNQEDHIVSPNGQCTSSFSS 240
           A  +S+DD  KKRS SLPDVEK+KRS R+ K PKL+S +SCN+EDHIVSPNGQ TSSFSS
Sbjct: 181 APTISIDDNPKKRSPSLPDVEKTKRSVRSRKSPKLASGSSCNEEDHIVSPNGQSTSSFSS 240

Query: 241 EDECNEVQEINGGITSSENSK--------GKSRASRGSATDPQSLYARKRRERINERLRI 300
           ED+CNE QEIN G+TSS NSK        GK RASRGSATDPQSLYARKRRERINERLRI
Sbjct: 241 EDDCNEPQEINCGVTSSTNSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLRI 300

Query: 301 LQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK 327
           LQSLVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN KLMK
Sbjct: 301 LQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNSKLMK 360

[Close]

BLAST of Sed0003665 vs. NCBI nr
Match: XP_008454391.1 (PREDICTED: transcription factor bHLH84-like [Cucumis melo] >KAA0044344.1 transcription factor bHLH84-like [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 5.5e-114
Identity = 250/352 (71.02%), Postives = 275/352 (78.12%), Query Frame = 0


Query: 5   GAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSI 64
           GAISEREWISLSG YTAEESDFMAN LNNYC+PNEL NSDL+LEI S+YW          
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNEL-NSDLTLEIPSSYW---------- 63

Query: 65  AAMDEPSYYSSDASDSSNMY---------------GHPLWFP-NGAS-----FSYEGVGN 124
           A+ +EPSYYSSDASDSSN+Y                +PLW P NGAS     FS E VGN
Sbjct: 64  ASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGN 123

Query: 125 ----PDNGSS-RKTNQC-RLQHSPTDPAACVNERSLQLKRKAE---EDEATRDEKVALMS 184
                DNGS+ RKT QC RLQ SP D  + VN +S Q KR+A+    +EA RD+KV  +S
Sbjct: 124 ADCLDDNGSNIRKTRQCSRLQQSPAD--SVVNGKSSQQKRRADGVMVEEAMRDDKVGPVS 183

Query: 185 VDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNE 244
           V++ S+KR +SL DVEK+KRSGRA K  K++S SCN+ED IVSPNGQCTSSFSSED+CNE
Sbjct: 184 VENASRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNE 243

Query: 245 VQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 304
            QEINGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS
Sbjct: 244 AQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 303

Query: 305 TMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 304 TMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0003665 vs. NCBI nr
Match: TYK29473.1 (transcription factor bHLH84-like [Cucumis melo var. makuwa])

HSP 1 Score: 421.4 bits (1082), Expect = 7.1e-114
Identity = 250/352 (71.02%), Postives = 275/352 (78.12%), Query Frame = 0


Query: 5   GAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSI 64
           GAISEREWISLSG YTAEESDFMAN LNNYC+PNEL NSDL+LEI S+YW          
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNEL-NSDLTLEIPSSYW---------- 63

Query: 65  AAMDEPSYYSSDASDSSNMY---------------GHPLWFP-NGAS-----FSYEGVGN 124
           A+ +EPSYYSSDASDSSN+Y                +PLW P NGAS     FS E VGN
Sbjct: 64  ASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGN 123

Query: 125 ----PDNGSS-RKTNQC-RLQHSPTDPAACVNERSLQLKRKAE---EDEATRDEKVALMS 184
                DNGS+ RKT QC RLQ SP D  + VN +S Q KR+A+    +EA RD+KV  +S
Sbjct: 124 ADCLDDNGSNIRKTRQCSRLQQSPAD--SVVNGKSSQPKRRADGVMVEEAMRDDKVGPVS 183

Query: 185 VDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNE 244
           V++ S+KR +SL DVEK+KRSGRA K  K++S SCN+ED IVSPNGQCTSSFSSED+CNE
Sbjct: 184 VENASRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNE 243

Query: 245 VQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 304
            QEINGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS
Sbjct: 244 AQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 303

Query: 305 TMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 304 TMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0003665 vs. NCBI nr
Match: XP_004152375.1 (transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetical protein Csa_014823 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 1.3e-110
Identity = 247/352 (70.17%), Postives = 271/352 (76.99%), Query Frame = 0


Query: 5   GAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSI 64
           GAISEREWISLSG YTAEESDFMAN L+NYC+PNEL NSDLSLEI S+YW          
Sbjct: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNEL-NSDLSLEIPSSYW---------- 62

Query: 65  AAMDEPSYYSSDASDSSNMY----------------GHPLWFP-NGAS----FSYEGVGN 124
           A+ +EPSYYSSDASDSSN+Y                   LW P NGAS    FS E V N
Sbjct: 63  ASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRN 122

Query: 125 ----PDNGSS-RKTNQC-RLQHSPTDPAACVNERSLQLKRKAEE---DEATRDEKVALMS 184
                DNGS+ RKT QC RLQ SP D  + VN +S Q KR+A +   +EA RD+KV  +S
Sbjct: 123 ADCLDDNGSNIRKTRQCSRLQQSPAD--SVVNGKSSQPKRRANDVMVEEAMRDDKVGPVS 182

Query: 185 VDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNE 244
           V++ S+KR +SL DVEK+KRSGRA K  K++S SCN+ED IVSPNGQCTSSFSSED+CNE
Sbjct: 183 VENFSRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNE 242

Query: 245 VQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 304
            QE NGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS
Sbjct: 243 AQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 302

Query: 305 TMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 303 TMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341

[Close]

BLAST of Sed0003665 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-38
Identity = 140/340 (41.18%), Postives = 186/340 (54.71%), Query Frame = 0


Query: 11  EW-ISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISS----------NYWVANEQ 70
           EW   L G YT EE+DFM   L +Y  P    +S+ +  +++           +  + E 
Sbjct: 6   EWSTGLGGIYT-EEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQES 65

Query: 71  TSLS--IAAM---DEPSYYSSDASDSSNMYGHPLWFPNGASFSYEGVGNPDNGSSRKTNQ 130
           +S S   AAM   +E +    DA+ ++N+Y                +   +      T  
Sbjct: 66  SSYSGYCAAMPRQEEDNNGMEDATINTNLY----------------LVGEETSECDATEY 125

Query: 131 CRLQHSPTDPAACVNERSLQLKRKAEEDEATRDEKVALMSVDDKSKKRSRSLPDVEKSKR 190
                 P +  A  ++ S  + +       T DEK  + +  + SKKR+R+    +K+KR
Sbjct: 126 SGKSLLPLETVAENHDHS--MLQPENSLTTTTDEK--MFNQCESSKKRTRA-TTTDKNKR 185

Query: 191 SGRAPKIPKL-----SSASCNQEDHIVSPNG-QCTSSFSSEDECNEVQEINGGIT----- 250
           + +A +  K       + +  +E++     G + T     +  C    E NGG T     
Sbjct: 186 ANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKE 245

Query: 251 SSENSK-----GKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 310
             E+SK     GK+RASRG+ATDPQSLYARKRRERINERLRILQ LVPNGTKVDISTMLE
Sbjct: 246 DGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLE 305

Query: 311 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 319
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LKL
Sbjct: 306 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 323

[Close]

BLAST of Sed0003665 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.6e-36
Identity = 135/348 (38.79%), Postives = 186/348 (53.45%), Query Frame = 0


Query: 11  EWISLSG---TYTAEESDFMANFLNNYCLPNELINSD--LSLEISSNYW-VANEQTSLSI 70
           EW +  G   TY  EE+DFM   L +Y  P    +S    S +    YW + +    LS+
Sbjct: 6   EWSNNLGGMYTYATEEADFMNQLLASYDHPGTGSSSGAAASGDHQGLYWNLGSHHNHLSL 65

Query: 71  AAMDEPSYYSSDASD-SSNMYGHPLWFP--------NGASFSYEGVGNPDNG--SSRKTN 130
            +      +S ++S  S+   G+    P            F  E V    N      +T+
Sbjct: 66  VSEAGSFCFSQESSSYSAGNSGYYTVVPPTVEENQNETMDFGMEDVTINTNSYLVGEETS 125

Query: 131 QCRLQHSPTDPAACVNERSLQLKRKAEEDEATRDEKVALMSVDD--KSKKRSRSLPDVEK 190
           +C ++   +       E  ++     +++E+    ++++ +      SKKRSR+    +K
Sbjct: 126 ECDVEKYSSGKTLMPLETVVE---NHDDEESLLQSEISVTTTKSLTGSKKRSRA-TSTDK 185

Query: 191 SKR---SGRAPKIPKLSSASCNQEDH------------IVSPNGQCTSSFSSEDECNEVQ 250
           +KR   + RA K  ++S  +   E+              +      +++F +E+E N   
Sbjct: 186 NKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCAD 245

Query: 251 EINGGITSSE---------NSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPN 310
           +  GG  SS          N  GK+RASRG+ATDPQSLYARKRRERINERLRILQ+LVPN
Sbjct: 246 QDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPN 305

Query: 311 GTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 316
           GTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 306 GTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLS 349

[Close]

BLAST of Sed0003665 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-33
Identity = 93/177 (52.54%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 143 EATRDEKVALMSVDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQC 202
           + T   K  L+ V++  K  S    DV + + +    K    S ++   E +    +GQ 
Sbjct: 91  QETSSLKRKLLDVENLCKTNSNC--DVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQS 150

Query: 203 TSSFSSEDECNEVQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQ 262
            S+ SS+DE   V  +          KGK+RA++G+ATDPQSLYARKRRE+INERL+ LQ
Sbjct: 151 LSN-SSDDEKASVTSV----------KGKTRATKGTATDPQSLYARKRREKINERLKTLQ 210

Query: 263 SLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLM 320
           +LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+
Sbjct: 211 NLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLL 254

[Close]

BLAST of Sed0003665 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.9e-33
Identity = 84/141 (59.57%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 180 KIPKLSSAS-CNQEDHIVSPNGQCTSSFSSEDECNEVQEINGGITSSENSKGKSRASRGS 239
           K  KLSS S    E      +GQ  SS++S D+   +  ++    +S++ K K++A+RG 
Sbjct: 82  KKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVS---NTSKSLKRKAKANRGI 141

Query: 240 ATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDD 299
           A+DPQSLYARKRRERIN+RL+ LQSLVPNGTKVDISTMLE+AV YVKFLQLQIKLLSS+D
Sbjct: 142 ASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSED 201

Query: 300 LWMYAPIAYNGMDIGLNLKLM 320
           LWMYAP+A+NG+++GL+  L+
Sbjct: 202 LWMYAPLAHNGLNMGLHHNLL 219

[Close]

BLAST of Sed0003665 vs. ExPASy Swiss-Prot
Match: Q2QQ32 (Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-22
Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 210 DECNEVQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGT 269
           D  NE+         ++ S  K+     SA   QS YA+ RR+RINERLRILQ L+PNGT
Sbjct: 86  DTENELMTNRSKEVRTKMSVSKACKHSVSAESSQSYYAKNRRQRINERLRILQELIPNGT 145

Query: 270 KVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYN 309
           KVDISTMLEEA++YVKFL LQIKLLSSD++WMYAP+A++
Sbjct: 146 KVDISTMLEEAIQYVKFLHLQIKLLSSDEMWMYAPLAFD 184

[Close]

BLAST of Sed0003665 vs. ExPASy TrEMBL
Match: A0A6J1D5B1 (transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.9e-122
Identity = 264/366 (72.13%), Postives = 290/366 (79.23%), Query Frame = 0


Query: 1   MEHIGAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQT 60
           ME IGAISEREWISLSGTYTAEESDFM N L+NYCLPNEL NS LSLEI  +YW ANE +
Sbjct: 1   MESIGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNEL-NSGLSLEIPPSYWAANEPS 60

Query: 61  -SLSIAAMDEPSYYSSDASDSSNMYG--------------HPLWFPNGAS----FSYEGV 120
            +L++AAM+EPSYYSSDASDSSN+YG              HPLWFPNGAS    FS E V
Sbjct: 61  PALAMAAMEEPSYYSSDASDSSNIYGLPQGNNNPYSLNDSHPLWFPNGASLSLDFSMEDV 120

Query: 121 GN-------PDNGSSRKTNQCRLQHSPTDP--AACVNERSLQLKRKAE--EDEATRDEKV 180
           GN        DNGSS+KT QCRLQ SPT+   AA +N +S Q KR+ E   +EA RD++V
Sbjct: 121 GNDDSARLDDDNGSSQKTRQCRLQQSPTNSAVAAAINGKSSQPKRRTEVTAEEAMRDDEV 180

Query: 181 A-LMSVDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSS-ASCNQEDHIVSPNGQCTSSFSS 240
           A  +S+DD  KKRS SLPDVEK+KRS R+ K PKL+S +SCN+EDHIVSPNGQ TSSFSS
Sbjct: 181 APTISIDDNPKKRSPSLPDVEKTKRSVRSRKSPKLASGSSCNEEDHIVSPNGQSTSSFSS 240

Query: 241 EDECNEVQEINGGITSSENSK--------GKSRASRGSATDPQSLYARKRRERINERLRI 300
           ED+CNE QEIN G+TSS NSK        GK RASRGSATDPQSLYARKRRERINERLRI
Sbjct: 241 EDDCNEPQEINCGVTSSTNSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLRI 300

Query: 301 LQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK 327
           LQSLVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN KLMK
Sbjct: 301 LQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNSKLMK 360

[Close]

BLAST of Sed0003665 vs. ExPASy TrEMBL
Match: A0A5A7TMH6 (Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00700 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.6e-114
Identity = 250/352 (71.02%), Postives = 275/352 (78.12%), Query Frame = 0


Query: 5   GAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSI 64
           GAISEREWISLSG YTAEESDFMAN LNNYC+PNEL NSDL+LEI S+YW          
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNEL-NSDLTLEIPSSYW---------- 63

Query: 65  AAMDEPSYYSSDASDSSNMY---------------GHPLWFP-NGAS-----FSYEGVGN 124
           A+ +EPSYYSSDASDSSN+Y                +PLW P NGAS     FS E VGN
Sbjct: 64  ASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGN 123

Query: 125 ----PDNGSS-RKTNQC-RLQHSPTDPAACVNERSLQLKRKAE---EDEATRDEKVALMS 184
                DNGS+ RKT QC RLQ SP D  + VN +S Q KR+A+    +EA RD+KV  +S
Sbjct: 124 ADCLDDNGSNIRKTRQCSRLQQSPAD--SVVNGKSSQQKRRADGVMVEEAMRDDKVGPVS 183

Query: 185 VDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNE 244
           V++ S+KR +SL DVEK+KRSGRA K  K++S SCN+ED IVSPNGQCTSSFSSED+CNE
Sbjct: 184 VENASRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNE 243

Query: 245 VQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 304
            QEINGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS
Sbjct: 244 AQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 303

Query: 305 TMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 304 TMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0003665 vs. ExPASy TrEMBL
Match: A0A1S3BZ99 (transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.6e-114
Identity = 250/352 (71.02%), Postives = 275/352 (78.12%), Query Frame = 0


Query: 5   GAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSI 64
           GAISEREWISLSG YTAEESDFMAN LNNYC+PNEL NSDL+LEI S+YW          
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNEL-NSDLTLEIPSSYW---------- 63

Query: 65  AAMDEPSYYSSDASDSSNMY---------------GHPLWFP-NGAS-----FSYEGVGN 124
           A+ +EPSYYSSDASDSSN+Y                +PLW P NGAS     FS E VGN
Sbjct: 64  ASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGN 123

Query: 125 ----PDNGSS-RKTNQC-RLQHSPTDPAACVNERSLQLKRKAE---EDEATRDEKVALMS 184
                DNGS+ RKT QC RLQ SP D  + VN +S Q KR+A+    +EA RD+KV  +S
Sbjct: 124 ADCLDDNGSNIRKTRQCSRLQQSPAD--SVVNGKSSQQKRRADGVMVEEAMRDDKVGPVS 183

Query: 185 VDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNE 244
           V++ S+KR +SL DVEK+KRSGRA K  K++S SCN+ED IVSPNGQCTSSFSSED+CNE
Sbjct: 184 VENASRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNE 243

Query: 245 VQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 304
            QEINGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS
Sbjct: 244 AQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 303

Query: 305 TMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 304 TMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0003665 vs. ExPASy TrEMBL
Match: A0A5D3E098 (Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00700 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 3.4e-114
Identity = 250/352 (71.02%), Postives = 275/352 (78.12%), Query Frame = 0


Query: 5   GAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSI 64
           GAISEREWISLSG YTAEESDFMAN LNNYC+PNEL NSDL+LEI S+YW          
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNEL-NSDLTLEIPSSYW---------- 63

Query: 65  AAMDEPSYYSSDASDSSNMY---------------GHPLWFP-NGAS-----FSYEGVGN 124
           A+ +EPSYYSSDASDSSN+Y                +PLW P NGAS     FS E VGN
Sbjct: 64  ASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGN 123

Query: 125 ----PDNGSS-RKTNQC-RLQHSPTDPAACVNERSLQLKRKAE---EDEATRDEKVALMS 184
                DNGS+ RKT QC RLQ SP D  + VN +S Q KR+A+    +EA RD+KV  +S
Sbjct: 124 ADCLDDNGSNIRKTRQCSRLQQSPAD--SVVNGKSSQPKRRADGVMVEEAMRDDKVGPVS 183

Query: 185 VDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNE 244
           V++ S+KR +SL DVEK+KRSGRA K  K++S SCN+ED IVSPNGQCTSSFSSED+CNE
Sbjct: 184 VENASRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNE 243

Query: 245 VQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 304
            QEINGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS
Sbjct: 244 AQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 303

Query: 305 TMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 304 TMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]

BLAST of Sed0003665 vs. ExPASy TrEMBL
Match: A0A0A0KT10 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 6.1e-111
Identity = 247/352 (70.17%), Postives = 271/352 (76.99%), Query Frame = 0


Query: 5   GAISEREWISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISSNYWVANEQTSLSI 64
           GAISEREWISLSG YTAEESDFMAN L+NYC+PNEL NSDLSLEI S+YW          
Sbjct: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNEL-NSDLSLEIPSSYW---------- 62

Query: 65  AAMDEPSYYSSDASDSSNMY----------------GHPLWFP-NGAS----FSYEGVGN 124
           A+ +EPSYYSSDASDSSN+Y                   LW P NGAS    FS E V N
Sbjct: 63  ASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRN 122

Query: 125 ----PDNGSS-RKTNQC-RLQHSPTDPAACVNERSLQLKRKAEE---DEATRDEKVALMS 184
                DNGS+ RKT QC RLQ SP D  + VN +S Q KR+A +   +EA RD+KV  +S
Sbjct: 123 ADCLDDNGSNIRKTRQCSRLQQSPAD--SVVNGKSSQPKRRANDVMVEEAMRDDKVGPVS 182

Query: 185 VDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQCTSSFSSEDECNE 244
           V++ S+KR +SL DVEK+KRSGRA K  K++S SCN+ED IVSPNGQCTSSFSSED+CNE
Sbjct: 183 VENFSRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNE 242

Query: 245 VQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 304
            QE NGGITSS  S GK RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS
Sbjct: 243 AQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIS 302

Query: 305 TMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 327
           TMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 303 TMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341

[Close]

BLAST of Sed0003665 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-39
Identity = 140/340 (41.18%), Postives = 186/340 (54.71%), Query Frame = 0


Query: 11  EW-ISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISS----------NYWVANEQ 70
           EW   L G YT EE+DFM   L +Y  P    +S+ +  +++           +  + E 
Sbjct: 6   EWSTGLGGIYT-EEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQES 65

Query: 71  TSLS--IAAM---DEPSYYSSDASDSSNMYGHPLWFPNGASFSYEGVGNPDNGSSRKTNQ 130
           +S S   AAM   +E +    DA+ ++N+Y                +   +      T  
Sbjct: 66  SSYSGYCAAMPRQEEDNNGMEDATINTNLY----------------LVGEETSECDATEY 125

Query: 131 CRLQHSPTDPAACVNERSLQLKRKAEEDEATRDEKVALMSVDDKSKKRSRSLPDVEKSKR 190
                 P +  A  ++ S  + +       T DEK  + +  + SKKR+R+    +K+KR
Sbjct: 126 SGKSLLPLETVAENHDHS--MLQPENSLTTTTDEK--MFNQCESSKKRTRA-TTTDKNKR 185

Query: 191 SGRAPKIPKL-----SSASCNQEDHIVSPNG-QCTSSFSSEDECNEVQEINGGIT----- 250
           + +A +  K       + +  +E++     G + T     +  C    E NGG T     
Sbjct: 186 ANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKE 245

Query: 251 SSENSK-----GKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLE 310
             E+SK     GK+RASRG+ATDPQSLYARKRRERINERLRILQ LVPNGTKVDISTMLE
Sbjct: 246 DGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLE 305

Query: 311 EAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 319
           EAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LKL
Sbjct: 306 EAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 323

[Close]

BLAST of Sed0003665 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-37
Identity = 135/348 (38.79%), Postives = 186/348 (53.45%), Query Frame = 0


Query: 11  EWISLSG---TYTAEESDFMANFLNNYCLPNELINSD--LSLEISSNYW-VANEQTSLSI 70
           EW +  G   TY  EE+DFM   L +Y  P    +S    S +    YW + +    LS+
Sbjct: 6   EWSNNLGGMYTYATEEADFMNQLLASYDHPGTGSSSGAAASGDHQGLYWNLGSHHNHLSL 65

Query: 71  AAMDEPSYYSSDASD-SSNMYGHPLWFP--------NGASFSYEGVGNPDNG--SSRKTN 130
            +      +S ++S  S+   G+    P            F  E V    N      +T+
Sbjct: 66  VSEAGSFCFSQESSSYSAGNSGYYTVVPPTVEENQNETMDFGMEDVTINTNSYLVGEETS 125

Query: 131 QCRLQHSPTDPAACVNERSLQLKRKAEEDEATRDEKVALMSVDD--KSKKRSRSLPDVEK 190
           +C ++   +       E  ++     +++E+    ++++ +      SKKRSR+    +K
Sbjct: 126 ECDVEKYSSGKTLMPLETVVE---NHDDEESLLQSEISVTTTKSLTGSKKRSRA-TSTDK 185

Query: 191 SKR---SGRAPKIPKLSSASCNQEDH------------IVSPNGQCTSSFSSEDECNEVQ 250
           +KR   + RA K  ++S  +   E+              +      +++F +E+E N   
Sbjct: 186 NKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCAD 245

Query: 251 EINGGITSSE---------NSKGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPN 310
           +  GG  SS          N  GK+RASRG+ATDPQSLYARKRRERINERLRILQ+LVPN
Sbjct: 246 QDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPN 305

Query: 311 GTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 316
           GTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 306 GTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLS 349

[Close]

BLAST of Sed0003665 vs. TAIR 10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-36
Identity = 140/353 (39.66%), Postives = 186/353 (52.69%), Query Frame = 0


Query: 11  EW-ISLSGTYTAEESDFMANFLNNYCLPNELINSDLSLEISS----------NYWVANEQ 70
           EW   L G YT EE+DFM   L +Y  P    +S+ +  +++           +  + E 
Sbjct: 6   EWSTGLGGIYT-EEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQES 65

Query: 71  TSLS--IAAM---DEPSYYSSDASDSSNMYGHPLWFPNGASFSYEGVGNPDNGSSRKTNQ 130
           +S S   AAM   +E +    DA+ ++N+Y                +   +      T  
Sbjct: 66  SSYSGYCAAMPRQEEDNNGMEDATINTNLY----------------LVGEETSECDATEY 125

Query: 131 CRLQHSPTDPAACVNERSLQLKRKAEEDEATRDEKVALMSVDDKSKKRSRSLPDVEKSKR 190
                 P +  A  ++ S  + +       T DEK  + +  + SKKR+R+    +K+KR
Sbjct: 126 SGKSLLPLETVAENHDHS--MLQPENSLTTTTDEK--MFNQCESSKKRTRA-TTTDKNKR 185

Query: 191 SGRAPKIPKL-----SSASCNQEDHIVSPNG-QCTSSFSSEDECNEVQEINGGIT----- 250
           + +A +  K       + +  +E++     G + T     +  C    E NGG T     
Sbjct: 186 ANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKE 245

Query: 251 SSENSK-----GKSRASRGSATDPQSLYAR-------------KRRERINERLRILQSLV 310
             E+SK     GK+RASRG+ATDPQSLYAR             KRRERINERLRILQ LV
Sbjct: 246 DGEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLV 305

Query: 311 PNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 319
           PNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LKL
Sbjct: 306 PNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 336

[Close]

BLAST of Sed0003665 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 145.2 bits (365), Expect = 9.2e-35
Identity = 93/177 (52.54%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 143 EATRDEKVALMSVDDKSKKRSRSLPDVEKSKRSGRAPKIPKLSSASCNQEDHIVSPNGQC 202
           + T   K  L+ V++  K  S    DV + + +    K    S ++   E +    +GQ 
Sbjct: 91  QETSSLKRKLLDVENLCKTNSNC--DVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQS 150

Query: 203 TSSFSSEDECNEVQEINGGITSSENSKGKSRASRGSATDPQSLYARKRRERINERLRILQ 262
            S+ SS+DE   V  +          KGK+RA++G+ATDPQSLYARKRRE+INERL+ LQ
Sbjct: 151 LSN-SSDDEKASVTSV----------KGKTRATKGTATDPQSLYARKRREKINERLKTLQ 210

Query: 263 SLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLM 320
           +LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+
Sbjct: 211 NLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLL 254

[Close]

BLAST of Sed0003665 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-34
Identity = 84/141 (59.57%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 180 KIPKLSSAS-CNQEDHIVSPNGQCTSSFSSEDECNEVQEINGGITSSENSKGKSRASRGS 239
           K  KLSS S    E      +GQ  SS++S D+   +  ++    +S++ K K++A+RG 
Sbjct: 82  KKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVS---NTSKSLKRKAKANRGI 141

Query: 240 ATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDD 299
           A+DPQSLYARKRRERIN+RL+ LQSLVPNGTKVDISTMLE+AV YVKFLQLQIKLLSS+D
Sbjct: 142 ASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSED 201

Query: 300 LWMYAPIAYNGMDIGLNLKLM 320
           LWMYAP+A+NG+++GL+  L+
Sbjct: 202 LWMYAPLAHNGLNMGLHHNLL 219

The following BLAST results are available for this feature:

BLAST of Sed0003665 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903006.1	9.3e-122	73.74	transcription factor bHLH84-like [Benincasa hispida]	[more]
XP_022149290.1	1.2e-121	72.13	transcription factor bHLH84-like [Momordica charantia]	[more]
XP_008454391.1	5.5e-114	71.02	PREDICTED: transcription factor bHLH84-like [Cucumis melo] >KAA0044344.1 transcr...	[more]
TYK29473.1	7.1e-114	71.02	transcription factor bHLH84-like [Cucumis melo var. makuwa]	[more]
XP_004152375.1	1.3e-110	70.17	transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetical protein C...	[more]

BLAST of Sed0003665 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XHI9	3.0e-38	41.18	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q84WK0	3.6e-36	38.79	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q8LEG1	1.3e-33	52.54	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q3E7L7	4.9e-33	59.57	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q2QQ32	1.7e-22	59.60	Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133...	[more]

BLAST of Sed0003665 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5B1	5.9e-122	72.13	transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 ...	[more]
A0A5A7TMH6	2.6e-114	71.02	Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BZ99	2.6e-114	71.02	transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV...	[more]
A0A5D3E098	3.4e-114	71.02	Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0KT10	6.1e-111	70.17	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 S...	[more]

BLAST of Sed0003665 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14760.1	2.1e-39	41.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G33880.1	2.6e-37	38.79	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT2G14760.3	1.3e-36	39.66	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	9.2e-35	52.54	root hair defective 6-like 4	[more]
AT5G43175.1	3.5e-34	59.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 244..293 e-value: 8.7E-12 score: 55.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 248..288 e-value: 2.1E-9 score: 37.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 238..287 score: 15.503742
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 240..296 e-value: 4.0E-12 score: 47.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 238..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..242
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 4..323
None	No IPR available	PANTHER	PTHR16223:SF232	TRANSCRIPTION FACTOR BHLH84-LIKE	coord: 4..323
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 239..301 e-value: 1.03663E-37 score: 127.123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003665.1	Sed0003665.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding