Sed0003660 (gene) Chayote v1

Overview


Name	Sed0003660
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NAC domain-containing protein
Location	LG02: 44246534 .. 44247244 (+)
RNA-Seq Expression	Sed0003660
Synteny	Sed0003660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAAATCATAATGTACCGTCGAAGACGGCATCGCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTGCAATGGTTCATTTACTCTACCCGTGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACTCGAGTATTTTCCGAGGCTATCGGTACCTTTATCGGTAGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCGAAAGGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAACAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAAAGATCGGTTCCAAAGACCAACACAAACATTGGCTTCTTCTCGGCCTACAACATCGGTTCCAAGACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGA

mRNA sequence

ATGGATCAAATCATAATGTACCGTCGAAGACGGCATCGCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTGCAATGGTTCATTTACTCTACCCGTGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACTCGAGTATTTTCCGAGGCTATCGGTACCTTTATCGGTAGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCGAAAGGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAACAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAAAGATCGGTTCCAAAGACCAACACAAACATTGGCTTCTTCTCGGCCTACAACATCGGTTCCAAGACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGA

Coding sequence (CDS)

ATGGATCAAATCATAATGTACCGTCGAAGACGGCATCGCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTGCAATGGTTCATTTACTCTACCCGTGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACTCGAGTATTTTCCGAGGCTATCGGTACCTTTATCGGTAGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCGAAAGGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAACAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAAAGATCGGTTCCAAAGACCAACACAAACATTGGCTTCTTCTCGGCCTACAACATCGGTTCCAAGACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGA

Protein sequence

MDQIIMYRRRRHRVFAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTKIGSKDQHKHWLLLGLQHRFQDQHKHWLLLGLRHRWKYTNRITPFQPRWRITTQI

Homology

[Close]

BLAST of Sed0003660 vs. NCBI nr
Match: XP_038880323.1 (NAC domain-containing protein 96-like [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-48
Identity = 96/167 (57.49%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           F+PTDEEL   YL+ KI  D      L V+DLY +EPS +WQ  GGIDGQD + FT L K
Sbjct: 13  FSPTDEELLSFYLFHKIVGDFIPPIVLQVIDLYNEEPSQIWQRCGGIDGQDIYFFTNLKK 72

Query: 75  KKSRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCSWTMYE 134
           KKSR++RKV SNGATWSGENKA  VFS      IGSVKRFHYEN K+K + ++ SW MYE
Sbjct: 73  KKSRVIRKVGSNGATWSGENKANMVFSSINNALIGSVKRFHYENSKVKLN-DNHSWIMYE 132

Query: 135 YTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQP--LASWP 180
           YTL P FVPKG  HDS+VLCK+R +I+K  ++ + T +Q     +WP
Sbjct: 133 YTLHPTFVPKGVVHDSFVLCKLRNKILKKEKRALSTAIQTSFFPNWP 178

[Close]

BLAST of Sed0003660 vs. NCBI nr
Match: XP_008443570.1 (PREDICTED: NAC domain-containing protein 105-like [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 6.4e-48
Identity = 101/182 (55.49%), Postives = 124/182 (68.13%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           F PTDEEL   YL+ K+  +      LPV+DLY  EPS +WQ  GG+D QD + FTTL K
Sbjct: 12  FCPTDEELLGYYLFNKVLGEQAPLLELPVIDLYIHEPSEIWQKCGGVDKQDVYFFTTLKK 71

Query: 75  KKSRIVRKVASNGATWSGENKATRVFSEAIG-TFIGSVKRFHYENPKLKG--SIEDCSWT 134
           KKSRI+RKV SNG TWS EN+A +VFS  I    +GSVKRFHY+ PK K    I DC+W 
Sbjct: 72  KKSRIIRKVGSNGNTWSCENRARQVFSSTIDHLLLGSVKRFHYQKPKAKDCTDINDCTWI 131

Query: 135 MYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLAS-WPPTKIGSKDQ-H 192
           MYEYTLDP+ VPKG  HDSYVLC IRK+IVK+ +  + +  + ++S WP T +   DQ H
Sbjct: 132 MYEYTLDPSIVPKGLVHDSYVLCMIRKKIVKSQKIVMTSKKRQISSNWPTTSMHVDDQTH 191

[Close]

BLAST of Sed0003660 vs. NCBI nr
Match: KAE8652623.1 (hypothetical protein Csa_013642 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-44
Identity = 95/185 (51.35%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 14  VFAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLN 73
           VF PT+EEL   YLY K+  +      LPV+DLYTQEPS +WQ   G+D +D + FTTL 
Sbjct: 11  VFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNKDIYFFTTLQ 70

Query: 74  KKKSRIVRKVASNGATWSGENKATRVFSEAI-GTFIGSVKRFHYENPKLKGSIEDCSWTM 133
           KKKSRI+RKV SNG TWSGENK  +VFS  I    +G++KRF YE  ++K   EDC+W M
Sbjct: 71  KKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK---EDCTWIM 130

Query: 134 YEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKIGSKDQ-H 193
           YEYTL+P  VP+G  HDSYVLC IRK+IVK+ +  + +  +  +  +WP T +   +Q H
Sbjct: 131 YEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWPMTSMHVDNQNH 190

Query: 194 KHWLL 195
           K   L
Sbjct: 191 KRMKL 192

[Close]

BLAST of Sed0003660 vs. NCBI nr
Match: XP_011660358.2 (uncharacterized protein LOC105436381 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-44
Identity = 95/185 (51.35%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 14  VFAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLN 73
           VF PT+EEL   YLY K+  +      LPV+DLYTQEPS +WQ   G+D +D + FTTL 
Sbjct: 11  VFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNKDIYFFTTLQ 70

Query: 74  KKKSRIVRKVASNGATWSGENKATRVFSEAI-GTFIGSVKRFHYENPKLKGSIEDCSWTM 133
           KKKSRI+RKV SNG TWSGENK  +VFS  I    +G++KRF YE  ++K   EDC+W M
Sbjct: 71  KKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK---EDCTWIM 130

Query: 134 YEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKIGSKDQ-H 193
           YEYTL+P  VP+G  HDSYVLC IRK+IVK+ +  + +  +  +  +WP T +   +Q H
Sbjct: 131 YEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWPMTSMHVDNQNH 190

Query: 194 KHWLL 195
           K   L
Sbjct: 191 KRMKL 192

[Close]

BLAST of Sed0003660 vs. NCBI nr
Match: KGN65836.2 (hypothetical protein Csa_019715 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 2.5e-44
Identity = 91/179 (50.84%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 14  VFAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLN 73
           +F PT+EEL   YLY K+         LPV+DLYTQEPS +WQ   G+D QD + FTTL 
Sbjct: 11  IFCPTEEELLGYYLYNKVLGGQTPPLVLPVIDLYTQEPSQIWQQCRGVDNQDIYFFTTLQ 70

Query: 74  KKKSRIVRKVASNGATWSGENKATRVFSEAI-GTFIGSVKRFHYENPKLKGSIEDCSWTM 133
           KKKSRI+RK+ SNG TWSGENK  +VFS  I    +G++KRF YE  ++K   EDC+W M
Sbjct: 71  KKKSRIIRKIGSNGGTWSGENKPQQVFSSIIDNLLLGTMKRFRYEKSQVK---EDCTWIM 130

Query: 134 YEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLA--SWPPTKIGSKDQH 190
           YEYTL+P+ VP+G  HDSYVLC IRK+IVK+ +  + +  +  +  +WP T +   +Q+
Sbjct: 131 YEYTLNPSIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRRASNNNWPMTSMHVDNQN 186

[Close]

BLAST of Sed0003660 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 45/149 (30.20%), Postives = 62/149 (41.61%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQ-PFGGIDGQDFFCFTTLN 74
           F PTDEEL   YL  K+ +       +  VDL   EP   W+ P     G+  + F TL 
Sbjct: 26  FHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEP---WELPEKAKMGEKEWYFFTLR 85

Query: 75  KKK--SRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRF-HYENPKLKGSIEDCSW 134
            +K  + +    A+    W    K   + S    + +G  K    Y+    KG  E   W
Sbjct: 86  DRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKG--EKSCW 145

Query: 135 TMYEYTLDPAF---VPKGKAHDSYVLCKI 157
            M+EY LD  F        A D +VLCK+
Sbjct: 146 VMHEYRLDGKFSYHYISSSAKDEWVLCKV 169

[Close]

BLAST of Sed0003660 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07
Identity = 48/151 (31.79%), Postives = 64/151 (42.38%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEP-SLLWQPFGGIDGQDFFCFTTLN 74
           F PTDEEL   YL  KI         +P VDLY  EP  L  +       Q++F F+  +
Sbjct: 12  FHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEWFFFSPRD 71

Query: 75  KKKSRIVR-KVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCSWTM 134
           +K     R   A+ G  W    K  RV        IG+ K   Y   +    I    W M
Sbjct: 72  RKYPNGSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIR-TGWVM 131

Query: 135 YEYTLDPAFVPKGK--AHDSYVLCKIRKRIV 162
           +EY LD +          D+Y LC++ K+IV
Sbjct: 132 HEYRLDESECEPSAFGMQDAYALCRVFKKIV 159

[Close]

BLAST of Sed0003660 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.7e-07
Identity = 41/131 (31.30%), Postives = 57/131 (43.51%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQ-PFGGIDGQDFFCFTTLN 74
           F PTDEEL   YL  K+ + C  S  +  VDL   EP   WQ P     G+  + F +L 
Sbjct: 23  FHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEP---WQLPGRAKMGEKEWYFFSLR 82

Query: 75  KKK--SRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRF-HYENPKLKGSIEDCSW 134
            +K  + +    A+    W    K   +FS      +G  K    Y+    KG  E  +W
Sbjct: 83  DRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKG--EKSNW 142

Query: 135 TMYEYTLDPAF 142
            M+EY L+  F
Sbjct: 143 VMHEYRLEGKF 148

[Close]

BLAST of Sed0003660 vs. ExPASy Swiss-Prot
Match: F4HYV5 (NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.3e-06
Identity = 48/170 (28.24%), Postives = 74/170 (43.53%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQ--PFGGIDGQDFFCFTTL 74
           F PTDEEL + YL  K+A        +  VDLY  EP  L +    G  +  +++ F+  
Sbjct: 13  FHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGNEEQSEWYFFSHK 72

Query: 75  NKKKSRIVR-KVASNGATW--SGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCS 134
           +KK     R   A+    W  +G +KA  +    IG     V    Y+     G   D  
Sbjct: 73  DKKYPTGTRTNRATKAGFWKATGRDKAIYIRHSLIGMRKTLV---FYKGRAPNGQKSD-- 132

Query: 135 WTMYEYTLDPAFVPKGKAHDSYVLCKI-RKRIVKTVRKGVPTFVQPLASW 179
           W M+EY L+ +        + +V+C++ +K++  TVRK       P   W
Sbjct: 133 WIMHEYRLETS-ENGTPQEEGWVVCRVFKKKLAATVRKMGDYHSSPSQHW 176

[Close]

BLAST of Sed0003660 vs. ExPASy Swiss-Prot
Match: Q84K00 (NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05
Identity = 48/150 (32.00%), Postives = 67/150 (44.67%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSF---TLPVVDLYTQEPSLLWQPFGGIDGQD--FFCF 74
           F PTDEEL   YL  K+   CN  F    + V D+Y  EP  L      +  +D  ++ F
Sbjct: 15  FHPTDEELVRYYLKRKV---CNKPFKFDAISVTDIYKSEPWDL-PDKSKLKSRDLEWYFF 74

Query: 75  TTLNKKKSRIVRKVASNGATWSGENKATRVFSEAI--GTFIGSVKRFHYENPKLKGSIED 134
           + L+KK S   +   +N AT  G  K T    E       +G  K   Y   +     E 
Sbjct: 75  SMLDKKYSNGSK---TNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRG-ER 134

Query: 135 CSWTMYEYTLDPAFVPK-GKAHDSYVLCKI 157
            +W M+EY L    + K G   ++YVLC+I
Sbjct: 135 TNWVMHEYRLSDEDLKKAGVPQEAYVLCRI 156

[Close]

BLAST of Sed0003660 vs. ExPASy TrEMBL
Match: A0A1S3B8F1 (NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 101/182 (55.49%), Postives = 124/182 (68.13%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           F PTDEEL   YL+ K+  +      LPV+DLY  EPS +WQ  GG+D QD + FTTL K
Sbjct: 12  FCPTDEELLGYYLFNKVLGEQAPLLELPVIDLYIHEPSEIWQKCGGVDKQDVYFFTTLKK 71

Query: 75  KKSRIVRKVASNGATWSGENKATRVFSEAIG-TFIGSVKRFHYENPKLKG--SIEDCSWT 134
           KKSRI+RKV SNG TWS EN+A +VFS  I    +GSVKRFHY+ PK K    I DC+W 
Sbjct: 72  KKSRIIRKVGSNGNTWSCENRARQVFSSTIDHLLLGSVKRFHYQKPKAKDCTDINDCTWI 131

Query: 135 MYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLAS-WPPTKIGSKDQ-H 192
           MYEYTLDP+ VPKG  HDSYVLC IRK+IVK+ +  + +  + ++S WP T +   DQ H
Sbjct: 132 MYEYTLDPSIVPKGLVHDSYVLCMIRKKIVKSQKIVMTSKKRQISSNWPTTSMHVDDQTH 191

[Close]

BLAST of Sed0003660 vs. ExPASy TrEMBL
Match: A0A6J1F2C3 (NAC domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111441766 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.6e-44
Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           FAPTDEEL   YL+ KI  D   S +LPV+D+Y+ EP+++WQ  GG++ +D + FTTL K
Sbjct: 12  FAPTDEELLIYYLFHKIVGDIVPSISLPVIDIYSHEPAMIWQQCGGMEDKDIYFFTTLKK 71

Query: 75  KKSRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYE-NPKLKGSIEDCSWTMY 134
           KKSRI+RKV  NG TWSGE+K  +VFS A    IG++KRFHYE +  +  + +DCSW M+
Sbjct: 72  KKSRIIRKVGLNGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMH 131

Query: 135 EYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQ 174
           EYTLDP  +  G  HDSYV+C IRKRI+K VR  V + +Q
Sbjct: 132 EYTLDPTVLTNGFVHDSYVVCLIRKRILKKVRNTVSSTIQ 171

[Close]

BLAST of Sed0003660 vs. ExPASy TrEMBL
Match: A0A5A7UPM7 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00950 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.1e-43
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           F PTDEEL   YLY KI  D      LPV+D+YTQEP  +W+  GG++G+D   FTTL K
Sbjct: 12  FCPTDEELLTFYLYHKIMGDFIPPIMLPVIDIYTQEPPQIWEQCGGVEGRDVHFFTTLKK 71

Query: 75  KKSRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDC----SW 134
           +KSRI+RKV SNGA WSGE+KAT+VFS    T +G+ KRFHYEN K+   ++DC    SW
Sbjct: 72  RKSRIIRKVGSNGAMWSGESKATKVFSHD-NTLVGTFKRFHYENSKMT-KVDDCNNIYSW 131

Query: 135 TMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK 163
            MYEYTL P  VP+G  HDS+VLC +RK+I+K
Sbjct: 132 IMYEYTLQPNLVPQGVIHDSFVLCMLRKKILK 161

[Close]

BLAST of Sed0003660 vs. ExPASy TrEMBL
Match: A0A5D3BHG6 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00980 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.1e-43
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           F PTDEEL   YLY KI  D      LPV+D+YTQEP  +W+  GG++G+D   FTTL K
Sbjct: 12  FCPTDEELLTFYLYHKIMGDFIPPIMLPVIDIYTQEPPQIWEQCGGVEGRDVHFFTTLKK 71

Query: 75  KKSRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDC----SW 134
           +KSRI+RKV SNGA WSGE+KAT+VFS    T +G+ KRFHYEN K+   ++DC    SW
Sbjct: 72  RKSRIIRKVGSNGAMWSGESKATKVFSHD-NTLVGTFKRFHYENSKMT-KVDDCNNIYSW 131

Query: 135 TMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK 163
            MYEYTL P  VP+G  HDS+VLC +RK+I+K
Sbjct: 132 IMYEYTLQPNLVPQGVIHDSFVLCMLRKKILK 161

[Close]

BLAST of Sed0003660 vs. ExPASy TrEMBL
Match: A0A6J1F881 (NAC domain-containing protein 96-like OS=Cucurbita moschata OX=3662 GN=LOC111441754 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.7e-42
Identity = 82/149 (55.03%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 14  VFAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLN 73
           VF PTD+ELF+ YL+ KI  + +  + LPVVDLY++EPS+LWQ +GGID Q    FT L 
Sbjct: 42  VFCPTDQELFQFYLHHKIVGN-DTPYVLPVVDLYSEEPSVLWQNYGGIDDQYLHVFTQLK 101

Query: 74  KKKSRIVRKVASNGATWSGENKATRVF-SEAIGTFIGSVKRFHYENPKLKGSIEDCSWTM 133
           KKKSR++RKV SNG TWSGE+ A ++F S+     +G++KRFHYEN K++ S E+CSW M
Sbjct: 102 KKKSRVIRKVGSNGGTWSGESAAVKIFSSDDNHILLGTLKRFHYENRKVEKSNENCSWIM 161

Query: 134 YEYTLDPAFVPKGKAHDSYVLCKIRKRIV 162
           +EYT++P  VP G  HD +V CKIR +I+
Sbjct: 162 HEYTINPDLVPNGNVHDRFVFCKIRHKIL 189

[Close]

BLAST of Sed0003660 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 62.8 bits (151), Expect = 4.3e-10
Identity = 41/150 (27.33%), Postives = 66/150 (44.00%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           F PTDEEL   YL  KIA+       +  VDL   EP  L +    + G++++ F+  ++
Sbjct: 22  FHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEK-AKMGGKEWYFFSLRDR 81

Query: 75  KKSRIVR-KVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCSWTMY 134
           K    VR   A+N   W    K   +F+      +G  K   +   +     + C W M+
Sbjct: 82  KYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTC-WVMH 141

Query: 135 EYTLDPAFVPKGKAHDSYVLCKIRKRIVKT 164
           EY L      +    D +V+C++ K+   T
Sbjct: 142 EYRLHSKSSYRTSKQDEWVVCRVFKKTEAT 169

[Close]

BLAST of Sed0003660 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 62.8 bits (151), Expect = 4.3e-10
Identity = 41/150 (27.33%), Postives = 66/150 (44.00%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNK 74
           F PTDEEL   YL  KIA+       +  VDL   EP  L +    + G++++ F+  ++
Sbjct: 22  FHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEK-AKMGGKEWYFFSLRDR 81

Query: 75  KKSRIVR-KVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCSWTMY 134
           K    VR   A+N   W    K   +F+      +G  K   +   +     + C W M+
Sbjct: 82  KYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTC-WVMH 141

Query: 135 EYTLDPAFVPKGKAHDSYVLCKIRKRIVKT 164
           EY L      +    D +V+C++ K+   T
Sbjct: 142 EYRLHSKSSYRTSKQDEWVVCRVFKKTEAT 169

[Close]

BLAST of Sed0003660 vs. TAIR 10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 8.2e-09
Identity = 45/149 (30.20%), Postives = 62/149 (41.61%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEPSLLWQ-PFGGIDGQDFFCFTTLN 74
           F PTDEEL   YL  K+ +       +  VDL   EP   W+ P     G+  + F TL 
Sbjct: 26  FHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEP---WELPEKAKMGEKEWYFFTLR 85

Query: 75  KKK--SRIVRKVASNGATWSGENKATRVFSEAIGTFIGSVKRF-HYENPKLKGSIEDCSW 134
            +K  + +    A+    W    K   + S    + +G  K    Y+    KG  E   W
Sbjct: 86  DRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKG--EKSCW 145

Query: 135 TMYEYTLDPAF---VPKGKAHDSYVLCKI 157
            M+EY LD  F        A D +VLCK+
Sbjct: 146 VMHEYRLDGKFSYHYISSSAKDEWVLCKV 169

[Close]

BLAST of Sed0003660 vs. TAIR 10
Match: AT3G17730.1 (NAC domain containing protein 57 )

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08
Identity = 47/148 (31.76%), Postives = 62/148 (41.89%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEP-SLLWQPFGGIDGQDFFCFTTLN 74
           F PTDEEL   YL  KI         +P VDLY  EP  L  + F      +++ F   +
Sbjct: 12  FHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSRDPEWYFFGPRD 71

Query: 75  KKKSRIVR-KVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCSWTM 134
           +K     R   A+ G  W    K  RV S++    IG  K   Y   +    I    W M
Sbjct: 72  RKYPNGFRTNRATRGGYWKSTGKDRRVTSQS--RAIGMKKTLVYYKGRAPQGIR-TDWVM 131

Query: 135 YEYTLDPAFV-PKGKAHDSYVLCKIRKR 160
           +EY LD           DSY LC++ K+
Sbjct: 132 HEYRLDDKDCDDPSSLQDSYALCRVFKK 156

[Close]

BLAST of Sed0003660 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 )

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08
Identity = 48/151 (31.79%), Postives = 64/151 (42.38%), Query Frame = 0


Query: 15  FAPTDEELFELYLYPKIAEDCNGSFTLPVVDLYTQEP-SLLWQPFGGIDGQDFFCFTTLN 74
           F PTDEEL   YL  KI         +P VDLY  EP  L  +       Q++F F+  +
Sbjct: 12  FHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEWFFFSPRD 71

Query: 75  KKKSRIVR-KVASNGATWSGENKATRVFSEAIGTFIGSVKRFHYENPKLKGSIEDCSWTM 134
           +K     R   A+ G  W    K  RV        IG+ K   Y   +    I    W M
Sbjct: 72  RKYPNGSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIR-TGWVM 131

Query: 135 YEYTLDPAFVPKGK--AHDSYVLCKIRKRIV 162
           +EY LD +          D+Y LC++ K+IV
Sbjct: 132 HEYRLDESECEPSAFGMQDAYALCRVFKKIV 159

The following BLAST results are available for this feature:

BLAST of Sed0003660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880323.1	2.9e-48	57.49	NAC domain-containing protein 96-like [Benincasa hispida]	[more]
XP_008443570.1	6.4e-48	55.49	PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]	[more]
KAE8652623.1	1.9e-44	51.35	hypothetical protein Csa_013642 [Cucumis sativus]	[more]
XP_011660358.2	1.9e-44	51.35	uncharacterized protein LOC105436381 [Cucumis sativus]	[more]
KGN65836.2	2.5e-44	50.84	hypothetical protein Csa_019715 [Cucumis sativus]	[more]

BLAST of Sed0003660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRV4	1.2e-07	30.20	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
Q9FFI5	3.3e-07	31.79	NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 ...	[more]
O04017	5.7e-07	31.30	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
F4HYV5	6.3e-06	28.24	NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 ...	[more]
Q84K00	1.4e-05	32.00	NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 ...	[more]

BLAST of Sed0003660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8F1	3.1e-48	55.49	NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 P...	[more]
A0A6J1F2C3	3.6e-44	54.38	NAC domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111441...	[more]
A0A5A7UPM7	5.1e-43	57.24	NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5D3BHG6	5.1e-43	57.24	NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1F881	5.7e-42	55.03	NAC domain-containing protein 96-like OS=Cucurbita moschata OX=3662 GN=LOC111441...	[more]

BLAST of Sed0003660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24430.1	4.3e-10	27.33	NAC domain containing protein 38	[more]
AT2G24430.2	4.3e-10	27.33	NAC domain containing protein 38	[more]
AT3G15170.1	8.2e-09	30.20	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G17730.1	2.4e-08	31.76	NAC domain containing protein 57	[more]
AT5G17260.1	2.4e-08	31.79	NAC domain containing protein 86	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 15..137 e-value: 9.7E-14 score: 52.4
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 9..159 score: 21.522949
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 18..162 e-value: 6.4E-19 score: 70.3
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 15..158
None	No IPR available	PANTHER	PTHR31989:SF371	SUBFAMILY NOT NAMED	coord: 14..170
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 14..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003660.1	Sed0003660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003677	DNA binding