Homology
BLAST of Sed0003655 vs. NCBI nr
Match:
XP_038890004.1 (DNA mismatch repair protein MSH2 [Benincasa hispida])
HSP 1 Score: 1772.7 bits (4590), Expect = 0.0e+00
Identity = 888/942 (94.27%), Postives = 915/942 (97.13%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MD+NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGD+AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S ALSSVS SKNMFESI RDLLLERMDH LELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNASEALSSVSVSKNMFESITRDLLLERMDHILELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVALFP FR+NGC+VGLGYVDLTKRVMG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRENGCMVGLGYVDLTKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGKF DIKPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LE KTDANKNFS+FGLMNRTCT GMGKRLLHMWLKQPLLDVKEI+SRLD+VQAF
Sbjct: 301 MRALNVLERKTDANKNFSLFGLMNRTCTVGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIR+PFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRIPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYD LSKLKN Q
Sbjct: 421 FSSLIKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDRGLSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
E+IEQQIQDLH++VANDLDLP DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ETIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYKS QKELVHRVIETASSFNEVFRPLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRP+ITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPNITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALAHGNTD EPHGKQ+VGV NFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQMVGVENFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFS++TTTSA T +E PLKRKREFGSDDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSSDTTTSATTGKEIPLKRKREFGSDDMSKGVARARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of Sed0003655 vs. NCBI nr
Match:
XP_023516636.1 (DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1770.7 bits (4585), Expect = 0.0e+00
Identity = 886/942 (94.06%), Postives = 915/942 (97.13%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MD+NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S ALSSVS SKNMFESI RDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVAL PNFR+NGCIVGL YVDLTKR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKF D+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLD+VQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKY+E LEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKN Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQIQDLH++VANDLDL DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYK+FQKELVHRVIETASSFNEVFRPLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALAHGNTD EPHGKQIVGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFST++TTSA T +E P KRKREFGS+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVARARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of Sed0003655 vs. NCBI nr
Match:
KAG7023250.1 (DNA mismatch repair protein MSH2 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1768.1 bits (4578), Expect = 0.0e+00
Identity = 884/942 (93.84%), Postives = 914/942 (97.03%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MD+NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S ALSSVS SKNMFESI RDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVAL PNFR+NGCIVGL YVDLTKR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKF D+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLD+VQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKY+E LEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKN Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQIQDLH++VANDLDL DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYK+FQKELVHRVIETASSFNEVFRPLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTAL HGNTD EPHGKQIVGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFST++TTSA T +E P KRKREFGS+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of Sed0003655 vs. NCBI nr
Match:
XP_022922057.1 (DNA mismatch repair protein MSH2 [Cucurbita moschata])
HSP 1 Score: 1766.1 bits (4573), Expect = 0.0e+00
Identity = 884/942 (93.84%), Postives = 914/942 (97.03%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MD+NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S ALSSVS SKNMFESI RDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVAL PNFR+NGCIVGL YVDLTKR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKF D+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLD+VQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKY+E LEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKN Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQIQDLH++VANDLDL DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYK+FQKELVHRVIETASSFNEVFRPLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALAHGNTD EPHGKQIVGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFST++TTSA T +E P KRKREFGS+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDA +SNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAANSNWLQQFL 942
BLAST of Sed0003655 vs. NCBI nr
Match:
KAG6589561.1 (DNA mismatch repair protein MSH2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1765.7 bits (4572), Expect = 0.0e+00
Identity = 882/942 (93.63%), Postives = 914/942 (97.03%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MD+NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S ALSSVS SKNMFESI RDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVAL PNFR+NGCIVGL YVDLTKR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKF D+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLD+VQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKY+E LEIWTDNDHLNKFNNLVETAVDLDQLENGEY+ISSSYDPALSKLK+ Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYLISSSYDPALSKLKHVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ES+EQQIQDLH++VANDLDL DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESVEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYK+FQKELVHRVIETASSFNEVFRPLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTAL HGNTD EPHGKQIVGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFST++TTSA T +E P KRKREFGS+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of Sed0003655 vs. ExPASy Swiss-Prot
Match:
O24617 (DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV=1)
HSP 1 Score: 1412.9 bits (3656), Expect = 0.0e+00
Identity = 689/942 (73.14%), Postives = 824/942 (87.47%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
M+ N ++Q+KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYTAHG+++VFIAKT
Sbjct: 1 MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YY TTTALR+LG+GS ALSSVS S+NMFE+I RDLLLER DHT+ELYEGSGSNWRL+K+G
Sbjct: 61 YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQD+P +V++FP+F D C++G+ YVDLT+RV+G+AEFLDDS
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTN+ES+L+ LG KEC+ P ESGK ++ K L+D+L +C VM+TERKK EFK RDL DL
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKG++EPVRDLVSGF+ A ALGALL+++ELL++E NYG + I++Y++ +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN++ESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VE+ LRQ+LRQHLKRISD+ERL LE+RR GLQHI+KLYQS+IRLPFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
F+SL+ E+YL+ LE +D DHL KF +LVE +VDLDQLENGEYMISSSYD L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
E +EQQI +LHK+ A +LDL DKALKLDK QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQ ++D+Y+S QKELV RV+ET +SF+EVF LA LLSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLL F+DLA+SCPTPY RP+ITSSD G+I+LEGSRHPCVEAQDWVNFIPN C+L+RGKSW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV+V +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA N++ + VGVANFHVSAHID+ KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFP SVVALAREKAAELEDFS ++ +E+ ++ RE D++S+G RA +F
Sbjct: 841 EFANFPESVVALAREKAAELEDFS--PSSMIINNEESGKRKSREDDPDEVSRGAERAHKF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
L+EF+ +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 LKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937
BLAST of Sed0003655 vs. ExPASy Swiss-Prot
Match:
Q9XGC9 (DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1)
HSP 1 Score: 1278.1 bits (3306), Expect = 0.0e+00
Identity = 640/940 (68.09%), Postives = 756/940 (80.43%), Query Frame = 0
Query: 2 DDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKTY 61
DD + KLPE KLDA+QAQGF++FFK LP D RAVR FDRRDYYTAHG++A FIA+TY
Sbjct: 4 DDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIARTY 63
Query: 62 YRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSGS 121
Y T +ALR+LG+ S + S S SK MFE+I R++LLER D TLELYEGSGSNWRL KSG+
Sbjct: 64 YHTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGT 123
Query: 122 PGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSHF 181
PGNIGSFED+LF+NN+M+DSP IVALFP R++ VGL ++D+T R +G+AEF +DS F
Sbjct: 124 PGNIGSFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRF 183
Query: 182 TNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSR 241
TNVESALV LGCKECLLP + K D+ PL D ++ C V+LTE+KK++FK RDL QDL R
Sbjct: 184 TNVESALVALGCKECLLPADCEKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGR 243
Query: 242 LVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAAM 301
+++GSVEPVRDL+S F++A LGALL+YAELLAD+ NYG Y I+KYNL+ YMRLDSAA+
Sbjct: 244 IIRGSVEPVRDLLSQFDYALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAV 303
Query: 302 RALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAFV 361
RALNI E KTD NKNFS+FGLMNRTCT GMGKRLL+ WLKQPLLDV EIN+RLD+VQAFV
Sbjct: 304 RALNIAEGKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFV 363
Query: 362 EDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQF 421
ED LRQ LRQ LKRISDI+RLTH L K+ A LQ +VKLYQS R+P+IK L+ Y GQF
Sbjct: 364 EDPELRQGLRQQLKRISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQF 423
Query: 422 SSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQE 481
S+L++ K+LE LE W + +F++LVETA+DL QLENGEY IS Y L LK+
Sbjct: 424 STLIRSKFLEPLEEWMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELS 483
Query: 482 SIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLET 541
+E I +LH A+DLDL DK LKL+KG+ GHVFR++KKEE KVRKKL+ ++++ET
Sbjct: 484 VVENHINNLHVDTASDLDLSVDKQLKLEKGS-LGHVFRMSKKEEQKVRKKLTGSYLIIET 543
Query: 542 RKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELDV 601
RKDGVKFTN+KLK L DQYQ + EY S QK++V V+ + +F+EVF A +LSELDV
Sbjct: 544 RKDGVKFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDV 603
Query: 602 LLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSWF 661
L F+DLA+SCP PY RPDIT+SDEG+I+L GSRHPC+EAQD VNFIPN C LVRGKSWF
Sbjct: 604 LQSFADLATSCPVPYVRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWF 663
Query: 662 QIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVST 721
QIITGPNMGGKSTFIRQVGVN+LMAQVG FVPCD+ASISVRDCIFARVGAGDCQL GVST
Sbjct: 664 QIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVST 723
Query: 722 FMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHF 781
FMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHL+EV +APTLFATHF
Sbjct: 724 FMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHF 783
Query: 782 HELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVAE 841
HELTALAH N D H I GVAN+HV AHID KLTMLYKVEPGACDQSFGIHVAE
Sbjct: 784 HELTALAHRNDDEHQHISDI-GVANYHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAE 843
Query: 842 FANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQFL 901
FANFP +VVALA+ KAAELEDFST T S E KRKR F DD+++G RAR FL
Sbjct: 844 FANFPEAVVALAKSKAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFL 903
Query: 902 EEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQF 942
EEF+ LP+D+MD + L+ ++++ L+KDA D+ WLQQF
Sbjct: 904 EEFAALPMDEMDGSKILEMATKMKADLQKDAADNPWLQQF 941
BLAST of Sed0003655 vs. ExPASy Swiss-Prot
Match:
Q5XXB5 (DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1)
HSP 1 Score: 707.2 bits (1824), Expect = 2.5e-202
Identity = 398/932 (42.70%), Postives = 582/932 (62.45%), Query Frame = 0
Query: 14 LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHGDDAVFIAKTYYRTTTALRKLG 73
L+L++ GF+ FF+++P + VR FDR D+YTAHG+DA+ A+ ++T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 74 -NGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSN-------WRLIKSGSPGN 133
G+ L SV SK FES V+DLLL R + +E+Y+ N W L SPGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 128
Query: 134 IGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSHFTNV 193
+ FED+LF NN+M S +V + + D VG+GYVD T+R +G+ EF D+ F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188
Query: 194 ESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
E+ L+ +G KEC+LP D+ L + + G+++TERKK++F +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 248
Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 313
G E + V + A ++L A++ + ELL+D+ N+G + + ++ YM+LD AA
Sbjct: 249 GKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308
Query: 314 MRALNILE-SKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQA 373
+RALN+ + S D + S+ L+N+ C G+RL++ W+KQPL+D I RL++V+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368
Query: 374 FVEDTALRQNLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYV 433
FVED LRQ L++ L+R D+ RL +++ A LQ +LYQ +LP + ALE +
Sbjct: 369 FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE 428
Query: 434 GQFSSLLKEKYLEFLEIWTD-NDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
G+ LL ++ L TD +KF ++ET +D+DQ+EN E+++ S+DP LS+L+
Sbjct: 429 GKHQKLLLAVFVTPL---TDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488
Query: 494 NAQESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
+E+++Q A DL L K +KLD TQFG+ FR+T KEE +R + +F
Sbjct: 489 EIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFS 548
Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLS 613
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ +S + E + L ++L+
Sbjct: 549 TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA 608
Query: 614 ELDVLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRG 673
+LD ++ F+ +++ P PY RP I +G IIL+ SRH CVE QD + FIPN +
Sbjct: 609 QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKD 668
Query: 674 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
K F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 728
Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLF 793
GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ I A +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF 788
Query: 794 ATHFHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGI 853
ATHFHELTALA+ QI V N HV+A ++ LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848
Query: 854 HVAEFANFPSSVVALAREKAAELEDF----STETTTSAPTAQETPLKRKREFGSDDMSKG 913
HVAE ANFP V+ A++KA ELE+F ++ P A++ L+R+ +G
Sbjct: 849 HVAELANFPKHVIECAKQKALELEEFQYIGESQGYDMEPAAKKCYLERE---------QG 908
Query: 914 VVRARQFLEEFSNLPLDKMDLKEALQQVSQLR 926
++FL + +P +M + ++ QL+
Sbjct: 909 EKIIQEFLSKVKQMPFTEMSEENITIKLKQLK 911
BLAST of Sed0003655 vs. ExPASy Swiss-Prot
Match:
Q3MHE4 (DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1)
HSP 1 Score: 706.4 bits (1822), Expect = 4.2e-202
Identity = 397/933 (42.55%), Postives = 582/933 (62.38%), Query Frame = 0
Query: 14 LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHGDDAVFIAKTYYRTTTALRKLG 73
L+LD+ GF+ FF+ +P + VR FDR D+YTAH +DA+ A+ ++T ++ +G
Sbjct: 9 LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68
Query: 74 -NGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSN-------WRLIKSGSPGN 133
G+ L SV SK FES V+DLLL R + +E+Y+ N W L SPGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 128
Query: 134 IGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSHFTNV 193
+ FED+LF NN+M S +V + + D VG+GYVD T+R +G+ EF D+ F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188
Query: 194 ESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
E+ L+ +G KEC++P D+ L + + G+++TERK+++F +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVMP-GGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248
Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 313
G E V V + A ++L A++ + ELL+D+ N+G + + ++ YM+LD AA
Sbjct: 249 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308
Query: 314 MRALNILE-SKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQA 373
+RALN+ + S D + + S+ L+N+ C G+RL++ W+KQPL+D I RL++V+A
Sbjct: 309 VRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368
Query: 374 FVEDTALRQNLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYV 433
FVED LRQNL++ L+R D+ RL +++ A LQ +LYQ +LP + ALE Y
Sbjct: 369 FVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 428
Query: 434 GQFSSLLKEKYL-EFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
G+ +L ++ +++ +D +KF ++ET +D+DQ+EN E+++ S+DP LS+L+
Sbjct: 429 GKHQALFLAVFVTPLIDLRSD---FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488
Query: 494 NAQESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
+ +E+++Q A DL L K +KLD TQFG+ FR+T KEE +R + +F
Sbjct: 489 EIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFS 548
Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLS 613
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ +S + E + L ++L+
Sbjct: 549 TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLA 608
Query: 614 ELDVLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRG 673
+LD ++ F+ ++ + P PY RP I G I L+ SRH CVE QD V FIPN +
Sbjct: 609 QLDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD 668
Query: 674 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
K F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK 728
Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLF 793
GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ I A +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF 788
Query: 794 ATHFHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGI 853
ATHFHELTALA+ QI V N HV+A ++ LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848
Query: 854 HVAEFANFPSSVVALAREKAAELEDFST-----ETTTSAPTAQETPLKRKREFGSDDMSK 913
HVAE ANFP V+ A++KA ELE+F E P A+ L+R+ +
Sbjct: 849 HVAELANFPRHVIECAKQKALELEEFQNIGKPQECDEMEPAAKRCYLERE---------Q 908
Query: 914 GVVRARQFLEEFSNLPLDKMDLKEALQQVSQLR 926
G ++FL + +P +M + +++ QL+
Sbjct: 909 GEKIIQEFLSKVKQVPFTEMSEESITRKLKQLK 912
BLAST of Sed0003655 vs. ExPASy Swiss-Prot
Match:
P43247 (DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1)
HSP 1 Score: 705.3 bits (1819), Expect = 9.4e-202
Identity = 393/928 (42.35%), Postives = 578/928 (62.28%), Query Frame = 0
Query: 14 LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHGDDAVFIAKTYYRTTTALRKLG 73
L+L+ GF+ FF+ +P S VR FDR D+YTAHG+DA+ A+ ++T ++ +G
Sbjct: 9 LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 74 -NGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSN-------WRLIKSGSPGN 133
GS L SV SK FES V+DLLL R + +E+Y+ N W L SPGN
Sbjct: 69 PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 128
Query: 134 IGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSHFTNV 193
+ FED+LF NN+M S ++ + D VG+GYVD T+R +G+ EF ++ F+N+
Sbjct: 129 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 188
Query: 194 ESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
E+ L+ +G KEC+LP D+ L + + G+++TERK+++F +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248
Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 313
G E + + A ++L A++ + ELL+D+ N+G + + ++ YM+LD AA
Sbjct: 249 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 308
Query: 314 MRALNILE-SKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQA 373
+RALN+ + S D + S+ L+N+ C G+RL++ W+KQPL+D I RL++V+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 368
Query: 374 FVEDTALRQNLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYV 433
FVED+ LRQ+L++ L+R D+ RL +++ A LQ +LYQ +LP + ALE Y
Sbjct: 369 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 428
Query: 434 GQFSSLLKEKYL-EFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
G+ +LL ++ +++ +D +KF ++ET +D+DQ+EN E+++ S+DP LS+L+
Sbjct: 429 GRHQALLLAVFVTPLIDLRSD---FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488
Query: 494 NAQESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
+ +E+++Q A L L K +KLD QFG+ FR+T KEE +R + +F
Sbjct: 489 EVMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFS 548
Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLS 613
++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ +S + E + L ++L+
Sbjct: 549 TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA 608
Query: 614 ELDVLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRG 673
LD ++ F+ ++++ P PY RP I +G IIL+ SRH CVE QD V FIPN +
Sbjct: 609 HLDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD 668
Query: 674 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
K F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 728
Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLF 793
GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI +++ I A +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF 788
Query: 794 ATHFHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGI 853
ATHFHELTALA+ QI V N HV+A ++ LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848
Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRA 913
HVAE ANFP V+A A++KA ELE+F T+ E KR+ + +G
Sbjct: 849 HVAELANFPRHVIACAKQKALELEEFQNIGTSLGCDEAEPAAKRR----CLEREQGEKII 908
Query: 914 RQFLEEFSNLPLDKMDLKEALQQVSQLR 926
+FL + +P M + ++ QL+
Sbjct: 909 LEFLSKVKQVPFTAMSEESISAKLKQLK 912
BLAST of Sed0003655 vs. ExPASy TrEMBL
Match:
A0A6J1E222 (DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 PE=3 SV=1)
HSP 1 Score: 1766.1 bits (4573), Expect = 0.0e+00
Identity = 884/942 (93.84%), Postives = 914/942 (97.03%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MD+NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S ALSSVS SKNMFESI RDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVAL PNFR+NGCIVGL YVDLTKR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKF D+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLD+VQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKY+E LEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKN Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQIQDLH++VANDLDL DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYK+FQKELVHRVIETASSFNEVFRPLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALAHGNTD EPHGKQIVGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFST++TTSA T +E P KRKREFGS+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDA +SNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAANSNWLQQFL 942
BLAST of Sed0003655 vs. ExPASy TrEMBL
Match:
A0A6J1JGF9 (DNA mismatch repair protein MSH2 OS=Cucurbita maxima OX=3661 GN=LOC111484889 PE=3 SV=1)
HSP 1 Score: 1763.4 bits (4566), Expect = 0.0e+00
Identity = 880/942 (93.42%), Postives = 917/942 (97.35%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
M++NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDY+T HGD+AVFIAKT
Sbjct: 1 MNENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYFTVHGDNAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S ALSSVS SKNMFESI RDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVAL PNFR+NGCIVGL Y+DLTKR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYIDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKF D+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLD+VQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKY+E LEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKL+NAQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLRNAQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQIQDLH++VANDLDL DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQK+++EYK+FQKELVHRVIETASSFNEVFRPLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKLVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKA ISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKAIISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKG+TEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGSTEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALAHGNTD EPHGKQIVGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKA+ELEDFST++TTSA T +E P KRKREFGS+DMSKGVVRARQF
Sbjct: 841 EFANFPSSVVALAREKASELEDFSTDSTTSANTGKEIPSKRKREFGSEDMSKGVVRARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of Sed0003655 vs. ExPASy TrEMBL
Match:
A0A6J1BZ63 (DNA mismatch repair protein MSH2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007070 PE=3 SV=1)
HSP 1 Score: 1749.9 bits (4531), Expect = 0.0e+00
Identity = 885/946 (93.55%), Postives = 909/946 (96.09%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
M DNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGD+AVFIAKT
Sbjct: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGNGS ALSSVS SKNMFESIVRDLLLERMDHTLELYEGSGS WRL+KSG
Sbjct: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVAL PNFR+NGCIVGLGYVDL+KRVMG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGKF DIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADE NYG Y +QKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLD+VQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTALRQ+LRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIR+PFIKNALENY GQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKYLEFLEIWTD +HLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKN Q
Sbjct: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQI DLH++VANDLDLP DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYKSFQKELV RVIETASSF EVF PLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPY+RPDITSSDEG+IILEGSRHPCVEAQDWVNFIPN CKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYSRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA NTD EPHGKQIVGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPL----KRKREFGSDDMSKGVVR 900
EFANFPSSVVALAREKAAELEDFST TT SA +E + KRKREF SDDM KGV R
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMYKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 946
BLAST of Sed0003655 vs. ExPASy TrEMBL
Match:
A0A5D3DX26 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00250 PE=3 SV=1)
HSP 1 Score: 1749.2 bits (4529), Expect = 0.0e+00
Identity = 880/942 (93.42%), Postives = 906/942 (96.18%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MDDNVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAH D+AVFIAKT
Sbjct: 1 MDDNVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S +LSSVS SKNMFESI RDLLLER DHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVALFP FRDNGCIVGLGYVDLTKRVMG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGK DIKPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
+RALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLD+VQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTAL Q+LRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKYLEFLE TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD LSKLKN Q
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQIQDLH++VANDLDLP DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYKS QK+LVHRVIETASSFNEVF+PLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALAHGNTD + HGKQ+VGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFST+TT +E P KRKREF SDDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of Sed0003655 vs. ExPASy TrEMBL
Match:
A0A5A7UX35 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003570 PE=3 SV=1)
HSP 1 Score: 1746.1 bits (4521), Expect = 0.0e+00
Identity = 878/942 (93.21%), Postives = 905/942 (96.07%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
MDDNVD++SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAH D+AVFIAKT
Sbjct: 1 MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YYRTTTALR+LGN S +LSSVS SKNMFESI RDLLLER DHTLELYEGSGSNWRLIKSG
Sbjct: 61 YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQDSP IVALFP FRDNGCIVGLGYVDLTKR MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGK DIKPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADE NYG YNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
+RALN+LESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLD+VQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VEDTAL Q+LRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENY GQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
FSSL+KEKYLEFLE TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD LSKLKN Q
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQIQDLH++VANDLDLP DKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKI++EYKS QK+LVHRVIETASSFNEVF+PLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLLGF+DLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPN CKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALAHGNTD + HGKQ+VGVANFHVSAHIDSS HKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFPSSVVALAREKAAELEDFST+TT +E P KRKREF SDDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of Sed0003655 vs. TAIR 10
Match:
AT3G18524.1 (MUTS homolog 2 )
HSP 1 Score: 1412.9 bits (3656), Expect = 0.0e+00
Identity = 689/942 (73.14%), Postives = 824/942 (87.47%), Query Frame = 0
Query: 1 MDDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDDAVFIAKT 60
M+ N ++Q+KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYTAHG+++VFIAKT
Sbjct: 1 MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60
Query: 61 YYRTTTALRKLGNGSAALSSVSASKNMFESIVRDLLLERMDHTLELYEGSGSNWRLIKSG 120
YY TTTALR+LG+GS ALSSVS S+NMFE+I RDLLLER DHT+ELYEGSGSNWRL+K+G
Sbjct: 61 YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120
Query: 121 SPGNIGSFEDVLFSNNEMQDSPTIVALFPNFRDNGCIVGLGYVDLTKRVMGIAEFLDDSH 180
SPGNIGSFEDVLF+NNEMQD+P +V++FP+F D C++G+ YVDLT+RV+G+AEFLDDS
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFSDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTN+ES+L+ LG KEC+ P ESGK ++ K L+D+L +C VM+TERKK EFK RDL DL
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADERNYGIYNIQKYNLDSYMRLDSAA 300
RLVKG++EPVRDLVSGF+ A ALGALL+++ELL++E NYG + I++Y++ +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300
Query: 301 MRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF 360
MRALN++ESKTDANKNFS+FGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360
Query: 361 VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYVGQ 420
VE+ LRQ+LRQHLKRISD+ERL LE+RR GLQHI+KLYQS+IRLPFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420
Query: 421 FSSLLKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNAQ 480
F+SL+ E+YL+ LE +D DHL KF +LVE +VDLDQLENGEYMISSSYD L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480
Query: 481 ESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
E +EQQI +LHK+ A +LDL DKALKLDK QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQ ++D+Y+S QKELV RV+ET +SF+EVF LA LLSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600
Query: 601 VLLGFSDLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNACKLVRGKSW 660
VLL F+DLA+SCPTPY RP+ITSSD G+I+LEGSRHPCVEAQDWVNFIPN C+L+RGKSW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV+V +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780
Query: 781 FHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSSIHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA N++ + VGVANFHVSAHID+ KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTETTTSAPTAQETPLKRKREFGSDDMSKGVVRARQF 900
EFANFP SVVALAREKAAELEDFS ++ +E+ ++ RE D++S+G RA +F
Sbjct: 841 EFANFPESVVALAREKAAELEDFS--PSSMIINNEESGKRKSREDDPDEVSRGAERAHKF 900
Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
L+EF+ +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 LKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937
BLAST of Sed0003655 vs. TAIR 10
Match:
AT3G24495.1 (MUTS homolog 7 )
HSP 1 Score: 207.6 bits (527), Expect = 4.4e-53
Identity = 185/660 (28.03%), Postives = 283/660 (42.88%), Query Frame = 0
Query: 244 KGSVEPVRDLVSGF---EFAPAALGALLAYAELLADE---RNYGIYNIQKYNLDSYMRLD 303
KGS E V G + A +ALG L+ + L E ++ I+ Q Y +R+D
Sbjct: 499 KGSSESWNCAVDGLNECDVALSALGELINHLSRLKLEDVLKHGDIFPYQVYR--GCLRID 558
Query: 304 SAAMRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVV 363
M L I + D + +++ ++ C + GKRLL W+ PL DV+ IN RLDVV
Sbjct: 559 GQTMVNLEIFNNSCDGGPSGTLYKYLD-NCVSPTGKRLLRNWICHPLKDVESINKRLDVV 618
Query: 364 QAFVEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENY 423
+ F ++ Q Q+L ++ D+ERL L IK+++ +
Sbjct: 619 EEFTANSESMQITGQYLHKLPDLERL-----------------------LGRIKSSVRSS 678
Query: 424 VGQFSSLLKEKYLEFLEIWTDNDHLNKFNNLVE---TAVD-LDQLENGEYMISSSYDPAL 483
+LL +K L+ + F +V+ + +D L L+ M+S Y
Sbjct: 679 ASVLPALLGKKVLK--------QRVKAFGQIVKGFRSGIDLLLALQKESNMMSLLYKLCK 738
Query: 484 SKLKNAQESIEQQIQDLHKRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLS 543
+ + +E + A D D P
Sbjct: 739 LPILVGKSGLELFLSQF--EAAIDSDFP-------------------------------- 798
Query: 544 THFIVLETRKDGVKFTNTKLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLA 603
Q Q + DE L+ IE A+ ++EV
Sbjct: 799 -----------------------NYQNQDVTDENAETLTILIELFIERATQWSEVI---- 858
Query: 604 ELLSELDVLLGFSDLAS----SCPTPYTRPDITSSDEGN------IILEGSRHPCVEAQD 663
+S LDVL F+ AS S P P+ ++D+ + ++G HP A D
Sbjct: 859 HTISCLDVLRSFAIAASLSAGSMARPVIFPESEATDQNQKTKGPILKIQGLWHPFAVAAD 918
Query: 664 WVNFIPNACKLVRGK-------SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDK 723
+PN L + ++TGPNMGGKST +R + ++ AQ+GC+VPC+
Sbjct: 919 GQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCES 978
Query: 724 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDG 783
IS+ D IF R+GA D + G STF+ E ETAS+L+ AT+ SL+I+DELGRGTST+DG
Sbjct: 979 CEISLVDTIFTRLGASDRIMTGESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDG 1038
Query: 784 FGLAWAICEHLVEVIKAPTLFATHFHELTALAHGNTDPEPHGKQIVGVANFHVSAHIDSS 843
+ +A+++ HLVE ++ LFATH+H LT + P K +
Sbjct: 1039 YAIAYSVFRHLVEKVQCRMLFATHYHPLT--KEFASHPRVTSKHMACAFKSRSDYQPRGC 1061
Query: 844 IHKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELEDFSTETTTSAPTAQE 877
L LY++ GAC +S+G+ VA A P+ VV A A ++ E S+ E
Sbjct: 1099 DQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETASGAAQAMKRSIGENFKSSELRSE 1061
BLAST of Sed0003655 vs. TAIR 10
Match:
AT4G02070.1 (MUTS homolog 6 )
HSP 1 Score: 204.1 bits (518), Expect = 4.8e-52
Identity = 171/614 (27.85%), Postives = 285/614 (46.42%), Query Frame = 0
Query: 289 NLDSYMRLDSAAMRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVK 348
N +M LD+AA+ L I E+ + + +++ +N+ C GKRLL WL +PL + +
Sbjct: 691 NEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTE 750
Query: 349 EINSRLDVVQAF-VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRL 408
I R D V E+ R+ L R+ D+ERL + I ++ ++
Sbjct: 751 LIKERQDAVAILRGENLPYSLEFRKSLSRLPDMERLIARM------FSSIEASGRNGDKV 810
Query: 409 PFIKNALENYVGQFSSLLK------------------EKYLEFLEIWTDNDHLNKFNNLV 468
++ + V +F S L+ + L + T L ++ +
Sbjct: 811 VLYEDTAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSI 870
Query: 469 ---ETAVDLDQLENGEYMI-----SSSYDPALSKLKNAQESIEQQIQDLHKRVA----ND 528
+ A D + N +I YD A ++ + S+++ +++ K + N
Sbjct: 871 KYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINY 930
Query: 529 LDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGV-KFTNTKLKKL 588
+ + D+ L E P+ H L + K GV ++ +KKL
Sbjct: 931 VTVGKDEYL----------------LEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKL 990
Query: 589 GDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELDVLLGFSDLASSCPTPY 648
+ + E +S K + R+I E +R L +ELDVL+ + + S
Sbjct: 991 LKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVR 1050
Query: 649 TRPDI---TSSDEGNIILEGSRHPCVEAQDW--VNFIPNACKLVRG-KSWFQIITGPNMG 708
RP I TS ++ G HP + +F+PN K+ K+ F ++TGPNMG
Sbjct: 1051 CRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMG 1110
Query: 709 GKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 768
GKST +RQV + +++AQ+G VP + +S D I R+GA D + G STF+ E+ ETA
Sbjct: 1111 GKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETA 1170
Query: 769 SILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALAHG 828
+L AT SL+++DELGRGT+T DG +A ++ EH +E ++ F+TH+H L+
Sbjct: 1171 VMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLS--VDY 1230
Query: 829 NTDPEPHGKQIVGVANFHVSAHIDSSI---HKLTMLYKVEPGACDQSFGIHVAEFANFPS 862
T+P+ V+ H++ I I ++T LY++ PGAC +S+G++VA A P
Sbjct: 1231 QTNPK--------VSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPD 1271
BLAST of Sed0003655 vs. TAIR 10
Match:
AT4G02070.2 (MUTS homolog 6 )
HSP 1 Score: 204.1 bits (518), Expect = 4.8e-52
Identity = 171/614 (27.85%), Postives = 285/614 (46.42%), Query Frame = 0
Query: 289 NLDSYMRLDSAAMRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVK 348
N +M LD+AA+ L I E+ + + +++ +N+ C GKRLL WL +PL + +
Sbjct: 688 NEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTE 747
Query: 349 EINSRLDVVQAF-VEDTALRQNLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRL 408
I R D V E+ R+ L R+ D+ERL + I ++ ++
Sbjct: 748 LIKERQDAVAILRGENLPYSLEFRKSLSRLPDMERLIARM------FSSIEASGRNGDKV 807
Query: 409 PFIKNALENYVGQFSSLLK------------------EKYLEFLEIWTDNDHLNKFNNLV 468
++ + V +F S L+ + L + T L ++ +
Sbjct: 808 VLYEDTAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSI 867
Query: 469 ---ETAVDLDQLENGEYMI-----SSSYDPALSKLKNAQESIEQQIQDLHKRVA----ND 528
+ A D + N +I YD A ++ + S+++ +++ K + N
Sbjct: 868 KYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINY 927
Query: 529 LDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGV-KFTNTKLKKL 588
+ + D+ L E P+ H L + K GV ++ +KKL
Sbjct: 928 VTVGKDEYL----------------LEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKL 987
Query: 589 GDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELDVLLGFSDLASSCPTPY 648
+ + E +S K + R+I E +R L +ELDVL+ + + S
Sbjct: 988 LKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVR 1047
Query: 649 TRPDI---TSSDEGNIILEGSRHPCVEAQDW--VNFIPNACKLVRG-KSWFQIITGPNMG 708
RP I TS ++ G HP + +F+PN K+ K+ F ++TGPNMG
Sbjct: 1048 CRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMG 1107
Query: 709 GKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 768
GKST +RQV + +++AQ+G VP + +S D I R+GA D + G STF+ E+ ETA
Sbjct: 1108 GKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETA 1167
Query: 769 SILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALAHG 828
+L AT SL+++DELGRGT+T DG +A ++ EH +E ++ F+TH+H L+
Sbjct: 1168 VMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLS--VDY 1227
Query: 829 NTDPEPHGKQIVGVANFHVSAHIDSSI---HKLTMLYKVEPGACDQSFGIHVAEFANFPS 862
T+P+ V+ H++ I I ++T LY++ PGAC +S+G++VA A P
Sbjct: 1228 QTNPK--------VSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPD 1268
BLAST of Sed0003655 vs. TAIR 10
Match:
AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )
HSP 1 Score: 200.7 bits (509), Expect = 5.3e-51
Identity = 176/617 (28.53%), Postives = 284/617 (46.03%), Query Frame = 0
Query: 294 MRLDSAAMRALNILESKTDANKNFSMFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSR 353
M L + ++ L ++++ +D +++ S+F MN T T G RLL W+ PL D I++R
Sbjct: 420 MTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTV-YGSRLLRHWVTHPLCDRNLISAR 479
Query: 354 LDVV----------------QAFVEDTALR-----------QNLRQHLKRISDIER-LTH 413
LD V VE+ + R ++ + R SDI+R +T
Sbjct: 480 LDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITR 539
Query: 414 YLEKRRAGLQHI-----VKLYQSSIRLPFIKNALENYVGQFS---SLLKEKYLEFLEIWT 473
+ + I + L I+ IK E Q + S L K + +
Sbjct: 540 IFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPV 599
Query: 474 DNDHLNKFNNLV--ETAVDLDQLENGEYMISSSYDPALSKLKNA----QESIEQQIQDLH 533
D+ K + + E AV D L+ + SS P L++ + A +E ++ I
Sbjct: 600 VVDNAGKLLSALNKEAAVRGDLLD--ILITSSDQFPELAEARQAVLVIREKLDSSIASFR 659
Query: 534 KRVANDLDLPADKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGVKFTNT 593
K++A + +F V IT E V K+ +++ + + K +++
Sbjct: 660 KKLA-------------IRNLEFLQVSGITHLIELPVDSKVPMNWVKVNSTKKTIRYHPP 719
Query: 594 KLKKLGDQYQKIIDEYKSFQKELVHRVIETASSFNEVFRPLAELLSELDVLLGFSDLASS 653
++ D+ + + +++ S + F+ + L+ LD L S L+ +
Sbjct: 720 EIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRN 779
Query: 654 CPTPYTRPDITSSDEG-NIILEGSRHPCVEAQDWVNFIPNACKLVRGKSWFQIITGPNMG 713
Y RP+ E I ++ RHP +E NF+PN L + QIITGPNMG
Sbjct: 780 --KNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMG 839
Query: 714 GKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 773
GKS +IRQV + +MAQVG FVP A + V D +F R+GA D G STF++E+ E +
Sbjct: 840 GKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEAS 899
Query: 774 SILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALAHG 833
I++ + +SL+I+DELGRGTST+DG +A+A +HL+ + LF TH+ E+ +++G
Sbjct: 900 HIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNG 959
Query: 834 NTDPEPHGKQIVGVANFHVS---AHIDSSIH---KLTMLYKVEPGACDQSFGIHVAEFAN 862
V +HVS D + +T LYK+ G C +SFG VA+ A
Sbjct: 960 FPG---------SVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQ 1009
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038890004.1 | 0.0e+00 | 94.27 | DNA mismatch repair protein MSH2 [Benincasa hispida] | [more] |
XP_023516636.1 | 0.0e+00 | 94.06 | DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo] | [more] |
KAG7023250.1 | 0.0e+00 | 93.84 | DNA mismatch repair protein MSH2 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022922057.1 | 0.0e+00 | 93.84 | DNA mismatch repair protein MSH2 [Cucurbita moschata] | [more] |
KAG6589561.1 | 0.0e+00 | 93.63 | DNA mismatch repair protein MSH2, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
Match Name | E-value | Identity | Description | |
O24617 | 0.0e+00 | 73.14 | DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV... | [more] |
Q9XGC9 | 0.0e+00 | 68.09 | DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1 | [more] |
Q5XXB5 | 2.5e-202 | 42.70 | DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV... | [more] |
Q3MHE4 | 4.2e-202 | 42.55 | DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1 | [more] |
P43247 | 9.4e-202 | 42.35 | DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E222 | 0.0e+00 | 93.84 | DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 P... | [more] |
A0A6J1JGF9 | 0.0e+00 | 93.42 | DNA mismatch repair protein MSH2 OS=Cucurbita maxima OX=3661 GN=LOC111484889 PE=... | [more] |
A0A6J1BZ63 | 0.0e+00 | 93.55 | DNA mismatch repair protein MSH2 isoform X1 OS=Momordica charantia OX=3673 GN=LO... | [more] |
A0A5D3DX26 | 0.0e+00 | 93.42 | DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7UX35 | 0.0e+00 | 93.21 | DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=11946... | [more] |