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Sed0003652 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGGAGTGGCCTTCCATATTTTGTATTGTTCTGTGACACTTGGTGTAGGTTGAGGGAGCATAATAGAGACAGAGAAGAACAACAACAAATAGGATTTTATTTTCTGAAAATCCCCTTTTTTTGATTTTGTGACCAACAAACAAATAAGGGGTAGTGGGAATTAGGAAACAATCACTTTGAGAGGTGAAATAAAGAGATTTGTTTTTTCTTTTTTTTTTGGTAATTTCTAGAGATACCCTTTTGAGATGGAGGAAGTTGAGAATGGAATTAGGCAATCCAAGTTTAGAAGGATTTGTGTGTTTTGTGGGAGTAGTCAAGGAAGGAAAAGTAGCTACCAAGATGCTGCCATTGAGCTTGGCAAGGAATTGGTATTGTTTCTTTCTTTTCTTTTCTCTTCTTCTTGGGGTTTAAGAAATTTCAACCAATCTTTGTTTTTCATTGCTTTTTTCAAGATGGGGTTTCTTTAAAGTTAGTGTTTAAGCCTTTTCTGGGGTTTTCTTTGCTTTCTTTTTGTTTGTCTATTTATTTTTGCTCATTGTCCTAAAATGGTTGTTTTTATTCTTGCCATATTCGTCTATTCTGATTCCTCTGTATTGTGTCATAATCTGTCTATCAAAATACCTTGAACTTAACATTTTTTTTTTCTTTTTGGCTATAAACTAACTTTTTTTCCCATTCTTTGCCTTTTGGAATTATCCTATCCTTTTTTTGAAGGTTTCAAGGAGCATAAACTTGGTGTATGGAGGAGGAAGTATAGGGCTAATGGGTTTGGTTTCCCAAGCTGTTCATGATGGTGGAGGCCATGTTCTTGGGTAAGTTTAAGAGACTCATTTTTTGTTTCATTTTTGAAGTATTGAGAACACATTTGAAAAGTTATAGACAAGAATGAGTGATGAAGGAAGGGGAAAATTATTGAGTTTGGTACTGTTTTTAGGCCTTGGTTTTTCTTTGTAAATATATAACTAATTTTTGTCTTCTTGTTGTTTTTTTCTCTACAGAGTCATTCCCAAGACGCTCATGCCTCGAGAGGTATGTCTGCTACTGCTAGAAAACATTCTTAACCTTTTCAAAATAGACCAAATATGAATTGAATATAGCCTTTACTTACTACCCCTCACTTTTCTTTTCTCTGAGCTGCTGTTTTCGAAACTTTCACTAATGTTCGGGTTAGCTTACGCCGACCTCGACTATGCTTCGTGACATATACGCCTCATTCTACAACGTTTAGATATTTTGGACTAGTAGTAAATTAACTTCTCCATTGATGTGTTTTCTCTTGCTATTTACCAAGTGGTTTTCAAGAGTTGTCTTTTTTGTGGGATTCTTGGCCTAATCTATGCACAACCTCACTTGTTAGGCACAAATCAAATGGTTGGCTATAGTTGGAGACATAAATATTTGGGGATCTTCTAATAACTATTTTGAGCTATTGAGTGTTTGTTTCATTGTTTTTTATCCCTTGGCCTTTTCCTACAAGTGAACATTTTGTTTTGTTTTATCTCCTTGTGAGTTTGAAATATTGTGGCTAGGGAATATCTGACCAAGAAATTATTCCTGCAACACTCATCATTACTTTATTACAAAAAAAATTTAAGTTTTTTTTTTGTGCCTTGTTTTTTTTCCTTTTGTGCAGTTAACTGGTGAAACAGTAGGGGAAGTGAAGGCAGTGGCAGATATGCACCAAAGGAAGGCTGAAATGGCTAAGCATTCTGACGCATTTATTGCCTTGCCTGGTTAGTACAAGCCTCACACCATTCCCTCTTGCACTTCAATATTTGAGTATGTTTCTAAAACATAATGCTCTGGCCTTTCTGTTCTTGCTGCTTATCAGAGCATTTAAGACTTGACCAAATCTCTTTAGTCTTTAGTCTCCAATAATGACCAAAGCCCTTCTCTAATTTGCTCTCTGGCTGAACTTATGTCAAAGTGGATGAAACCATAATCTGAACAATGAGTGGTAGTACTCTTCGCCCTTGGCGAACAATAGCAATAGTTCAGTAGCATAAGTGTATGTCTATGAACAAAGAGGTCGGTGAATTTGAATCTCCCACCTTTCTTCATTCTTTGCTTTTGGATTTTTGTCCAATGTCTCTTTGGCTGAATATCCTTGTGGAAAGAGTGTAAAGAAATGAAAAGAGGAAAAGAAAAAAGAGGGGAAAATGACTTGTTTTTCTTTCGGTGCCAGCACTTTTTATGTTTATTTTGTCTAGTGAAAAATCTGGTTTAGTCCCTTTCAAGAATTGAAGCAAGGAATCTGTATTTTCTTTTTTTCTTTTTTTTTTAAGTCTAACTGAACGTTATCCTTTACTTTAATGGCTTCTACTTGGCTTTAAGGTCTCTGGCTTGCTTGTCATAATTACTCATCAACAACTCCTCACAAACCCCAAGACACAATGATTATGGTGTAGCCTTTCAAACCCCAACTCTTGACTAATGACCCATCAACATTTTACACTGAAAAATAGAGTTCCGGAAATGCTCCAACTCTGTGCTTGCTTTCCCACAATGTTGTCTCAGCCATAACCTTGATCCTACCGTTCCAAATTTTATTCAGGTTACATTTAGGGTGTATTTGTGCCACCAAGAACAAAGGCGAAGAATGAGAATAGAGATGGTTTCCCGTGTTTGGGCTACTGAGAATCATTCTCACCATAATGGCGTTTTTTCCAAAATCACCTTTTTTATTCTCCTCCTAACTACTTTTGATTCTCCCCCACAACAACTTTTATGCATCATATCACTATTTTTCACTCTCATCATACACATTTTTTTTCTTATAATCATTCCCTTCACTCCAGACAAAAATAATCGTTCTCCTCATAACCATTCTCTTCATCTCAAACACAAATAATCATTCTCTCCATAATCATTTCCTTTCCTAATTGTCCCCCTATTTCTCATTCCCTCATAATCATTCTCATTCCCCTTTCTCCAAACATACTCTTAGCATAACAAAAAGTTCACTCATTTTTCCAAATTGTTTCCTTGCCTCCAGAGGGGCAATTTTGCTTCATTCCTCAATCTCCTTTGAAGATGTGTGTTTGTGACATTACTTACAGCTGCAAAATATTTTGACTATGCTTAGTTATGAAGTGGGGGAGCGGTTATCGGGGTTTGGGAGCGACATTGACAATGACCGTAAAAGTCCTATTGAATAATTTGTTTTTTTTGCTAAACTTTCCCACATAAATTCTGGTGACAGCTAGAATGCTGAAGAACTGGTTGATCAGGCCTTTTAGATCGTCAAAGCACACTACAACCAAATATATGCTGTTATGACCAGAAGATTGGATTGTTCTGTATATGCATATTCCTGCAAATTCTTGTGCTAAATTGGCTATAAGCAATTAAATATTGAAGAAAAAAAATTCAAAATCGTATCAACTCTTGTGCTTGTAAATAATCCACGAGGTGTCTCTAATATTTAAATATGTCCTGCAGGTGGTTATGGAACTTTAGAGGAGTTGCTTGAAGTAATTACTTGGGCTCAGCTTGGAATTCATGATAAACCTGTAAATTCCCCTTCTCCAACTCTTTATCCAAATCATTTTAGAATGAATGCTATTTTTCTAGCTGGGGAATTAACTCAGGGCAAATCAATATCAAAATTTGCAGGTGGGTTTGCTGAATGTTGATGGATACTACAATTCTTTGCTGTCCTTTATCGACAAAGCTGTGGAAGAGGGATTCGTCAGTCCGAGTGCACGAGAAATAATCTTATCCGCTCCAACAGCTAAGGAGTTGATGATGAAATTGGAGGTATTTCTCTACCTCCCAACTACTCTATTGCCCAACCATTTATATTGCTTTAGGGTGTGATTGGGGGACCGTTTATGCAAATGCGAGGTTGGGTTATATAACCCAACTAACGTTTGGTCCACCAGTTATAATAACTAGTGGGTTGGCTCAAACTCAAGCCGTCATTTCACATCATTCATGCACCGTTTGAGATTAACCATTTATCTTCCTTGTTATAATAACTTGCATTCTAAATATTGTTTATTATAACTCCTGTTATAGTAACCTGCACCTCAAACACAATTGATAATTAGTCATTGTTTACTATAACCTAACCGATGCCCCAAACGGCGCTTAATGTCTTGAAGGAGTTGGTAATTTTGTTTTGTTGGAAGGAGTCTCTGTTTCTGTCATGTCTAATAGTAGCTGTTGACTGTTGTAGGACTATGCTCCTTGTCATGAAAGAGTTGCTTCAAAGTTGAACTGGGAAATAGAGCAGCTTAGCTTTCTCTAGAGAGAGGATATAGAATGGGATAAGAAAGAAAGAAGGAATCTGAATTTTGAAGCTCTAAATTCCTATTTTAGGGGATTCTTTTTTGTAAATTATTGCAAATTGACCTCAGTAAATGAAGTTTGTTATATTTTCCTTCTCCATGAAACACTGATTTCCTTTAGAAATTGTAAGTAAATGAGGTTGATGAAGTTTCCCCTCTGAAAATGGCTACTCTACTAACATTAGACAGAAAAAGATAAAGATATTTGCTAGTGATTCATCAAA TGGGGAGTGGCCTTCCATATTTTGTATTGTTCTGTGACACTTGGTGTAGGTTGAGGGAGCATAATAGAGACAGAGAAGAACAACAACAAATAGGATTTTATTTTCTGAAAATCCCCTTTTTTTGATTTTGTGACCAACAAACAAATAAGGGGTAGTGGGAATTAGGAAACAATCACTTTGAGAGGTGAAATAAAGAGATTTGTTTTTTCTTTTTTTTTTGGTAATTTCTAGAGATACCCTTTTGAGATGGAGGAAGTTGAGAATGGAATTAGGCAATCCAAGTTTAGAAGGATTTGTGTGTTTTGTGGGAGTAGTCAAGGAAGGAAAAGTAGCTACCAAGATGCTGCCATTGAGCTTGGCAAGGAATTGGTTTCAAGGAGCATAAACTTGGTGTATGGAGGAGGAAGTATAGGGCTAATGGGTTTGGTTTCCCAAGCTGTTCATGATGGTGGAGGCCATGTTCTTGGAGTCATTCCCAAGACGCTCATGCCTCGAGAGTTAACTGGTGAAACAGTAGGGGAAGTGAAGGCAGTGGCAGATATGCACCAAAGGAAGGCTGAAATGGCTAAGCATTCTGACGCATTTATTGCCTTGCCTGGTGGTTATGGAACTTTAGAGGAGTTGCTTGAAGTAATTACTTGGGCTCAGCTTGGAATTCATGATAAACCTGTGGGTTTGCTGAATGTTGATGGATACTACAATTCTTTGCTGTCCTTTATCGACAAAGCTGTGGAAGAGGGATTCGTCAGTCCGAGTGCACGAGAAATAATCTTATCCGCTCCAACAGCTAAGGAGTTGATGATGAAATTGGAGGACTATGCTCCTTGTCATGAAAGAGTTGCTTCAAAGTTGAACTGGGAAATAGAGCAGCTTAGCTTTCTCTAGAGAGAGGATATAGAATGGGATAAGAAAGAAAGAAGGAATCTGAATTTTGAAGCTCTAAATTCCTATTTTAGGGGATTCTTTTTTGTAAATTATTGCAAATTGACCTCAGTAAATGAAGTTTGTTATATTTTCCTTCTCCATGAAACACTGATTTCCTTTAGAAATTGTAAGTAAATGAGGTTGATGAAGTTTCCCCTCTGAAAATGGCTACTCTACTAACATTAGACAGAAAAAGATAAAGATATTTGCTAGTGATTCATCAAA ATGGAGGAAGTTGAGAATGGAATTAGGCAATCCAAGTTTAGAAGGATTTGTGTGTTTTGTGGGAGTAGTCAAGGAAGGAAAAGTAGCTACCAAGATGCTGCCATTGAGCTTGGCAAGGAATTGGTTTCAAGGAGCATAAACTTGGTGTATGGAGGAGGAAGTATAGGGCTAATGGGTTTGGTTTCCCAAGCTGTTCATGATGGTGGAGGCCATGTTCTTGGAGTCATTCCCAAGACGCTCATGCCTCGAGAGTTAACTGGTGAAACAGTAGGGGAAGTGAAGGCAGTGGCAGATATGCACCAAAGGAAGGCTGAAATGGCTAAGCATTCTGACGCATTTATTGCCTTGCCTGGTGGTTATGGAACTTTAGAGGAGTTGCTTGAAGTAATTACTTGGGCTCAGCTTGGAATTCATGATAAACCTGTGGGTTTGCTGAATGTTGATGGATACTACAATTCTTTGCTGTCCTTTATCGACAAAGCTGTGGAAGAGGGATTCGTCAGTCCGAGTGCACGAGAAATAATCTTATCCGCTCCAACAGCTAAGGAGTTGATGATGAAATTGGAGGACTATGCTCCTTGTCATGAAAGAGTTGCTTCAAAGTTGAACTGGGAAATAGAGCAGCTTAGCTTTCTCTAG MEEVENGIRQSKFRRICVFCGSSQGRKSSYQDAAIELGKELVSRSINLVYGGGSIGLMGLVSQAVHDGGGHVLGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFVSPSAREIILSAPTAKELMMKLEDYAPCHERVASKLNWEIEQLSFL Homology
BLAST of Sed0003652 vs. NCBI nr
Match: XP_022143714.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Momordica charantia]) HSP 1 Score: 410.6 bits (1054), Expect = 8.2e-111 Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0
BLAST of Sed0003652 vs. NCBI nr
Match: XP_038883317.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Benincasa hispida]) HSP 1 Score: 400.6 bits (1028), Expect = 8.5e-108 Identity = 198/210 (94.29%), Postives = 205/210 (97.62%), Query Frame = 0
BLAST of Sed0003652 vs. NCBI nr
Match: XP_022962747.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucurbita moschata] >XP_022972796.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucurbita maxima] >XP_023517589.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucurbita pepo subsp. pepo] >KAG6595249.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027266.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 400.6 bits (1028), Expect = 8.5e-108 Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Sed0003652 vs. NCBI nr
Match: XP_004143250.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis sativus] >XP_008449247.1 PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo] >KAE8647393.1 hypothetical protein Csa_003416 [Cucumis sativus]) HSP 1 Score: 398.3 bits (1022), Expect = 4.2e-107 Identity = 197/210 (93.81%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of Sed0003652 vs. NCBI nr
Match: XP_022979089.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucurbita maxima]) HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106 Identity = 195/210 (92.86%), Postives = 205/210 (97.62%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 3.2e-102 Identity = 180/211 (85.31%), Postives = 201/211 (95.26%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 1.3e-98 Identity = 175/211 (82.94%), Postives = 197/211 (93.36%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 6.5e-95 Identity = 170/200 (85.00%), Postives = 189/200 (94.50%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.1e-93 Identity = 164/202 (81.19%), Postives = 187/202 (92.57%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 2.7e-93 Identity = 165/202 (81.68%), Postives = 188/202 (93.07%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy TrEMBL
Match: A0A6J1CQ55 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111013555 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.0e-111 Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy TrEMBL
Match: A0A6J1I6Y3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111471299 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.1e-108 Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy TrEMBL
Match: A0A6J1HDE9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111463146 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.1e-108 Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy TrEMBL
Match: A0A1S3BKZ9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103491183 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107 Identity = 197/210 (93.81%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of Sed0003652 vs. ExPASy TrEMBL
Match: A0A6J1IVQ4 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111478831 PE=3 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106 Identity = 195/210 (92.86%), Postives = 205/210 (97.62%), Query Frame = 0
BLAST of Sed0003652 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 372.5 bits (955), Expect = 2.3e-103 Identity = 180/211 (85.31%), Postives = 201/211 (95.26%), Query Frame = 0
BLAST of Sed0003652 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 360.5 bits (924), Expect = 9.0e-100 Identity = 175/211 (82.94%), Postives = 197/211 (93.36%), Query Frame = 0
BLAST of Sed0003652 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 356.7 bits (914), Expect = 1.3e-98 Identity = 179/235 (76.17%), Postives = 200/235 (85.11%), Query Frame = 0
BLAST of Sed0003652 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 348.2 bits (892), Expect = 4.6e-96 Identity = 170/200 (85.00%), Postives = 189/200 (94.50%), Query Frame = 0
BLAST of Sed0003652 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 324.3 bits (830), Expect = 7.2e-89 Identity = 157/204 (76.96%), Postives = 184/204 (90.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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