Sed0003594 (gene) Chayote v1

Overview


Name	Sed0003594
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	LG14: 2872016 .. 2872639 (+)
RNA-Seq Expression	Sed0003594
Synteny	Sed0003594

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGAGCATGTGCCCACCACAGCAAGAAACACCCGAAACACCGGAAAATCTACGCCGGAATCCTAATCTTCCTGTTCATCCTCCTCCTCACGATCCTCCTGGTTTGGGCCGTTCTAAAGCCCACAAAGCCCAAATTCACAGTCCAAGACGCCACCATCTTCATCTTCAACGTCTCCGCCCAAAACCTCATCTCCTCCACCATACAGGTCACCGTCGCCTCCCGCAACCCCAACGACAACGTCGGAATCTACTACGACCGCCTCGACGTCGCCGCCGTCTACCGGAACCAGCAGATCACCCTCCGAACCGCCATTCCGGCCAACTACCAAGGCCACAACGACTACAACGTCTGGTCCCCCTTCCTCGTCGGCGTCAACGTTCCGATCTCGCCCTACACCGGCGCCGCCCTCTACCAGGACCGGTCCTTCGGAACCGTCCGGTTGAACTTCAAACTCGCCGGTCGGGTTCGGTTCAAGGTCGGTTCCTTCACCTCCGCCCGGTACCACATCGACGTTGACTGCCCCGCCACGATCTCCGTCGGAAACCCCGCCGCCGGTGTCATAGTCGGCGAAAACGCCGTTAAGTACCAGTTGGCTCAGTCCTGCGACGTCAGTTTATAA

mRNA sequence

ATGTCAAGAGCATGTGCCCACCACAGCAAGAAACACCCGAAACACCGGAAAATCTACGCCGGAATCCTAATCTTCCTGTTCATCCTCCTCCTCACGATCCTCCTGGTTTGGGCCGTTCTAAAGCCCACAAAGCCCAAATTCACAGTCCAAGACGCCACCATCTTCATCTTCAACGTCTCCGCCCAAAACCTCATCTCCTCCACCATACAGGTCACCGTCGCCTCCCGCAACCCCAACGACAACGTCGGAATCTACTACGACCGCCTCGACGTCGCCGCCGTCTACCGGAACCAGCAGATCACCCTCCGAACCGCCATTCCGGCCAACTACCAAGGCCACAACGACTACAACGTCTGGTCCCCCTTCCTCGTCGGCGTCAACGTTCCGATCTCGCCCTACACCGGCGCCGCCCTCTACCAGGACCGGTCCTTCGGAACCGTCCGGTTGAACTTCAAACTCGCCGGTCGGGTTCGGTTCAAGGTCGGTTCCTTCACCTCCGCCCGGTACCACATCGACGTTGACTGCCCCGCCACGATCTCCGTCGGAAACCCCGCCGCCGGTGTCATAGTCGGCGAAAACGCCGTTAAGTACCAGTTGGCTCAGTCCTGCGACGTCAGTTTATAA

Coding sequence (CDS)

ATGTCAAGAGCATGTGCCCACCACAGCAAGAAACACCCGAAACACCGGAAAATCTACGCCGGAATCCTAATCTTCCTGTTCATCCTCCTCCTCACGATCCTCCTGGTTTGGGCCGTTCTAAAGCCCACAAAGCCCAAATTCACAGTCCAAGACGCCACCATCTTCATCTTCAACGTCTCCGCCCAAAACCTCATCTCCTCCACCATACAGGTCACCGTCGCCTCCCGCAACCCCAACGACAACGTCGGAATCTACTACGACCGCCTCGACGTCGCCGCCGTCTACCGGAACCAGCAGATCACCCTCCGAACCGCCATTCCGGCCAACTACCAAGGCCACAACGACTACAACGTCTGGTCCCCCTTCCTCGTCGGCGTCAACGTTCCGATCTCGCCCTACACCGGCGCCGCCCTCTACCAGGACCGGTCCTTCGGAACCGTCCGGTTGAACTTCAAACTCGCCGGTCGGGTTCGGTTCAAGGTCGGTTCCTTCACCTCCGCCCGGTACCACATCGACGTTGACTGCCCCGCCACGATCTCCGTCGGAAACCCCGCCGCCGGTGTCATAGTCGGCGAAAACGCCGTTAAGTACCAGTTGGCTCAGTCCTGCGACGTCAGTTTATAA

Protein sequence

MSRACAHHSKKHPKHRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNVSAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISVGNPAAGVIVGENAVKYQLAQSCDVSL

Homology

[Close]

BLAST of Sed0003594 vs. NCBI nr
Match: XP_038881034.1 (NDR1/HIN1-like protein 1 [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 150/208 (72.12%), Postives = 177/208 (85.10%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           MS+ C HHSKK PK  R+IYAGILIFLF++LLTILL+WA+L+PTKPKF +QDAT+F+FNV
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVTV+SRNPND +G+YYDRLDV AVYRNQQITLRT I   YQGHND N+W
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPFLVG +VPISPY GAAL QD++ GTV+L+ KL GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFLVGNDVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AG+IVG NAVKYQL + C VS+
Sbjct: 181 MFGNPTAGIIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. NCBI nr
Match: XP_008462618.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0025219.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 312.4 bits (799), Expect = 3.0e-81
Identity = 149/208 (71.63%), Postives = 177/208 (85.10%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           MS+ C HHSKK PK  R+IYAGILIFLF++LLTILL+WA+L+PTKPKF +QDAT+++FN+
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNI 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVTV+SRNPND +G+YYDRLDV AVYRNQQITLRT I   YQGHND N+W
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTGIQPTYQGHNDLNIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPFLVG +VPISPY GAAL QD++ GTV+L+ KL GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFLVGNSVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AGVIVG NAVKYQL + C VS+
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. NCBI nr
Match: XP_004143336.1 (NDR1/HIN1-like protein 1 [Cucumis sativus] >KGN48300.1 hypothetical protein Csa_003405 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80
Identity = 148/208 (71.15%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           MS+ CAHHSKK PK  R+IYAGILIFLF++LLTILL+WA+L+PTKPKF +QDAT+++FN+
Sbjct: 1   MSKECAHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNL 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVTV SRNPND +G+YYDRLDV AVY NQQITLRT I   YQGHND N+W
Sbjct: 61  TAANFISSSIQVTVYSRNPNDKIGVYYDRLDVYAVYHNQQITLRTGIQPTYQGHNDVNIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPFL+G NVPISPY GA L QD++ GTV+L+ KL GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFLIGNNVPISPYNGATLNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AGVIVG NAVKYQL + C VS+
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. NCBI nr
Match: XP_022978373.1 (NDR1/HIN1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-80
Identity = 148/208 (71.15%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           M + CAHHSKK PK  RKIYAG+LIFLF++LLTILL+WA+L+PTKPKF +QDAT+F+FNV
Sbjct: 1   MVKECAHHSKKRPKLIRKIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVT++SRNPND +GIYYDRLDV AVYRNQQITLRT I  NYQGHND N+W
Sbjct: 61  TAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPF+VG  VPISPY GAAL QD++ GTV L+ K+ GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AG+IVG N VKYQL + C VS+
Sbjct: 181 MFGNPTAGIIVGNNVVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. NCBI nr
Match: XP_022926048.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata] >KAG6604318.1 NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034470.1 NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-80
Identity = 148/208 (71.15%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           M + CAHHSKK PK  R+IYAG+LIFLF++LLTILL+WA+L+PTKPKF +QDAT+F+FNV
Sbjct: 1   MVKECAHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           SA N ISS+IQVT++SRNPND +GIYYDRLDV AVYRNQQITLRT I  NYQGHND N+W
Sbjct: 61  SAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPF+VG  VPISPY GAAL QD++ GTV L+ K+ GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AG+IVG N VKYQL + C VS+
Sbjct: 181 MFGNPTAGIIVGNNVVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.6e-59
Identity = 110/206 (53.40%), Postives = 149/206 (72.33%), Query Frame = 0


Query: 5   CAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNVSAQ- 64
           C +H     K  R+I+  I+  LFI+ LTILL+WA+L+P+KP+F +QDAT++ FNVS   
Sbjct: 4   CENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 63

Query: 65  -NLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSP 124
            NL++S  Q+T++SRNPN+ +GIYYDRLDV A YR+QQIT  T+IP  YQGH D ++WSP
Sbjct: 64  PNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSP 123

Query: 125 FLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISV 184
           F+ G +VPI+P+ G +L  D+  G V L  +  GRVR+KVG+F + +YH+ V CPA I+ 
Sbjct: 124 FVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINF 183

Query: 185 GNPAAGVIVGENAVKYQLAQSCDVSL 208
           GN A GVIVG+NAVKY    SC VS+
Sbjct: 184 GNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of Sed0003594 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-54
Identity = 103/191 (53.93%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 17  KIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNVSAQNLISSTIQVTVASR 76
           +I   I+ F+ I+L+TI LVW +L+PTKP+F +QDAT++ FN+S  NL++S  Q+T+ASR
Sbjct: 20  RICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASR 79

Query: 77  NPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSPFLVGVNVPISPYTGA 136
           N N  +GIYYDRL V A YRNQQITLRTAIP  YQGH + NVWSPF+ G +VPI+P+   
Sbjct: 80  NRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAV 139

Query: 137 ALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISVGNPAAGVIVGENAVK 196
           AL  +++ G V L  +  GRVR+KVG+  + +YH+ V C A I++ + AAGV VGENAVK
Sbjct: 140 ALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVK 199

Query: 197 YQLAQSCDVSL 208
           Y L   C V++
Sbjct: 200 YMLINKCSVNV 210

[Close]

BLAST of Sed0003594 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.5e-31
Identity = 65/171 (38.01%), Postives = 111/171 (64.91%), Query Frame = 0


Query: 14  KHRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV--SAQNLISSTIQV 73
           +H+K++     F   LLL I LVW +L P +P+F++ +A I+  N+  S+ +L++S++Q+
Sbjct: 23  RHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQL 82

Query: 74  TVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSPFLVGVNVPIS 133
           T+ S+NPN  VGIYYD+L V A YR QQIT   ++P  YQ H + N+ + FL G  +P++
Sbjct: 83  TLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVA 142

Query: 134 PYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISVG 183
              G  + ++RS G + +  K+ G++R+K+G++ S  Y  +V+C A ++ G
Sbjct: 143 QSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFG 193

[Close]

BLAST of Sed0003594 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 18  IYAGILIFLFILL-LTILLVWAVLKPTKPKFTVQDATIFIF-NVSAQNLISSTIQVTVAS 77
           ++  ++I L ++L +  L+ W +++P   KF V DA++  F + S  N++   + +TV  
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 78  RNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSPFLVGVNVPI-SPYT 137
           RNPN  +G+YYDR++  A Y  ++ +  T  P  YQGH +  V +P   G N+ I +   
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPF-YQGHKNTTVLTPTFQGQNLVIFNAGQ 159

Query: 138 GAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDC 176
              L  +R  G   +  K   RVRFK+G     R    VDC
Sbjct: 160 SRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]

BLAST of Sed0003594 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13
Identity = 50/171 (29.24%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 22  ILIFLFILL-LTILLVWAVLKPTKPKFTVQDATIFIFNVSAQNLISSTIQVTVASRNPND 81
           ILI + +LL +  L++W + +P   KF V DA +  F +   N +   + +    RNPN 
Sbjct: 51  ILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNR 110

Query: 82  NVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSPFLVGVN-VPISPYTGAALY 141
            +G+YYD ++V   Y +Q+  +   I   YQGH +  V    LVG   V +       L 
Sbjct: 111 RIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLN 170

Query: 142 QDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISV-GNPAAGVI 190
           +D +    R++ KL  ++RFK G   S R+   + C   + +  N  +G +
Sbjct: 171 EDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFV 221

[Close]

BLAST of Sed0003594 vs. ExPASy TrEMBL
Match: A0A5A7SIT9 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00660 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.4e-81
Identity = 149/208 (71.63%), Postives = 177/208 (85.10%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           MS+ C HHSKK PK  R+IYAGILIFLF++LLTILL+WA+L+PTKPKF +QDAT+++FN+
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNI 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVTV+SRNPND +G+YYDRLDV AVYRNQQITLRT I   YQGHND N+W
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTGIQPTYQGHNDLNIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPFLVG +VPISPY GAAL QD++ GTV+L+ KL GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFLVGNSVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AGVIVG NAVKYQL + C VS+
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. ExPASy TrEMBL
Match: A0A1S3CIY0 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500933 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.4e-81
Identity = 149/208 (71.63%), Postives = 177/208 (85.10%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           MS+ C HHSKK PK  R+IYAGILIFLF++LLTILL+WA+L+PTKPKF +QDAT+++FN+
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNI 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVTV+SRNPND +G+YYDRLDV AVYRNQQITLRT I   YQGHND N+W
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTGIQPTYQGHNDLNIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPFLVG +VPISPY GAAL QD++ GTV+L+ KL GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFLVGNSVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AGVIVG NAVKYQL + C VS+
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. ExPASy TrEMBL
Match: A0A0A0KF12 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G454475 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.1e-81
Identity = 148/208 (71.15%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           MS+ CAHHSKK PK  R+IYAGILIFLF++LLTILL+WA+L+PTKPKF +QDAT+++FN+
Sbjct: 1   MSKECAHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNL 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVTV SRNPND +G+YYDRLDV AVY NQQITLRT I   YQGHND N+W
Sbjct: 61  TAANFISSSIQVTVYSRNPNDKIGVYYDRLDVYAVYHNQQITLRTGIQPTYQGHNDVNIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPFL+G NVPISPY GA L QD++ GTV+L+ KL GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFLIGNNVPISPYNGATLNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AGVIVG NAVKYQL + C VS+
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. ExPASy TrEMBL
Match: A0A6J1ISX4 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478384 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.3e-81
Identity = 148/208 (71.15%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           M + CAHHSKK PK  RKIYAG+LIFLF++LLTILL+WA+L+PTKPKF +QDAT+F+FNV
Sbjct: 1   MVKECAHHSKKRPKLIRKIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           +A N ISS+IQVT++SRNPND +GIYYDRLDV AVYRNQQITLRT I  NYQGHND N+W
Sbjct: 61  TAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPF+VG  VPISPY GAAL QD++ GTV L+ K+ GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AG+IVG N VKYQL + C VS+
Sbjct: 181 MFGNPTAGIIVGNNVVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. ExPASy TrEMBL
Match: A0A6J1EGY4 (NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111433283 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.3e-81
Identity = 148/208 (71.15%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MSRACAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           M + CAHHSKK PK  R+IYAG+LIFLF++LLTILL+WA+L+PTKPKF +QDAT+F+FNV
Sbjct: 1   MVKECAHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           SA N ISS+IQVT++SRNPND +GIYYDRLDV AVYRNQQITLRT I  NYQGHND N+W
Sbjct: 61  SAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPF+VG  VPISPY GAAL QD++ GTV L+ K+ GRVRFKVG+F S RYH++VDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
             GNP AG+IVG N VKYQL + C VS+
Sbjct: 181 MFGNPTAGIIVGNNVVKYQLVRPCSVSV 208

[Close]

BLAST of Sed0003594 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-60
Identity = 113/208 (54.33%), Postives = 148/208 (71.15%), Query Frame = 0


Query: 1   MSRACAHH-SKKHPKHRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNV 60
           MS+ C +H   K    RK+ A I+ F+ I+L+TI LVW +L+PTKP+F +QDAT++ FN+
Sbjct: 1   MSKDCGNHGGGKEVVVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNL 60

Query: 61  SAQNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVW 120
           S  NL++S  QVT+ASRNPN  +GIYYDRL V A Y NQQITLRTAIP  YQGH + NVW
Sbjct: 61  SQPNLLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVW 120

Query: 121 SPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATI 180
           SPF+ G  VPI+PY   AL +++  G V L  +  G VR+KV +  + +YHI V C A I
Sbjct: 121 SPFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFI 180

Query: 181 SVGNPAAGVIVGENAVKYQLAQSCDVSL 208
           ++GN AAGV+VG+NAVKY LA  C V++
Sbjct: 181 NLGNKAAGVLVGDNAVKYTLANKCSVNV 208

[Close]

BLAST of Sed0003594 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 228.8 bits (582), Expect = 4.0e-60
Identity = 110/206 (53.40%), Postives = 149/206 (72.33%), Query Frame = 0


Query: 5   CAHHSKKHPK-HRKIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNVSAQ- 64
           C +H     K  R+I+  I+  LFI+ LTILL+WA+L+P+KP+F +QDAT++ FNVS   
Sbjct: 4   CENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 63

Query: 65  -NLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSP 124
            NL++S  Q+T++SRNPN+ +GIYYDRLDV A YR+QQIT  T+IP  YQGH D ++WSP
Sbjct: 64  PNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSP 123

Query: 125 FLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISV 184
           F+ G +VPI+P+ G +L  D+  G V L  +  GRVR+KVG+F + +YH+ V CPA I+ 
Sbjct: 124 FVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINF 183

Query: 185 GNPAAGVIVGENAVKYQLAQSCDVSL 208
           GN A GVIVG+NAVKY    SC VS+
Sbjct: 184 GNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of Sed0003594 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 213.0 bits (541), Expect = 2.3e-55
Identity = 103/191 (53.93%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 17  KIYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNVSAQNLISSTIQVTVASR 76
           +I   I+ F+ I+L+TI LVW +L+PTKP+F +QDAT++ FN+S  NL++S  Q+T+ASR
Sbjct: 20  RICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASR 79

Query: 77  NPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSPFLVGVNVPISPYTGA 136
           N N  +GIYYDRL V A YRNQQITLRTAIP  YQGH + NVWSPF+ G +VPI+P+   
Sbjct: 80  NRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAV 139

Query: 137 ALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISVGNPAAGVIVGENAVK 196
           AL  +++ G V L  +  GRVR+KVG+  + +YH+ V C A I++ + AAGV VGENAVK
Sbjct: 140 ALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVK 199

Query: 197 YQLAQSCDVSL 208
           Y L   C V++
Sbjct: 200 YMLINKCSVNV 210

[Close]

BLAST of Sed0003594 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 208.4 bits (529), Expect = 5.6e-54
Identity = 108/207 (52.17%), Postives = 141/207 (68.12%), Query Frame = 0


Query: 3   RACAHHSKKHPKHRK-IYAGILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNVSA 62
           + C HH  +  K RK I A +L FL  +L  + LVWA+L P  P+F +QDATI+ FNVS 
Sbjct: 4   KECEHHHDEDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQ 63

Query: 63  QNLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNVWSP 122
            N ++S +QVT++SRNPND +GI+YDRLD+ A YRNQQ+TL T +PA YQGH D  +WSP
Sbjct: 64  PNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSP 123

Query: 123 FLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPATISV 182
           FL G  VP++PY   AL QD + G V LN K+ G VR+KVG++ S RY + V+CPA I++
Sbjct: 124 FLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYITL 183

Query: 183 GNPAAGVIVGEN-AVKYQLAQSCDVSL 208
               AG   G+  AVKYQL Q C V +
Sbjct: 184 ----AGHFSGDGPAVKYQLVQRCAVDV 206

[Close]

BLAST of Sed0003594 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 208.4 bits (529), Expect = 5.6e-54
Identity = 109/209 (52.15%), Postives = 143/209 (68.42%), Query Frame = 0


Query: 2   SRACAHHSKKHPKHRKIYA-GILIFLFILLLTILLVWAVLKPTKPKFTVQDATIFIFNVS 61
           S+ C  H      +RKI    I I L ++L+ ILLVWA+L+P+KP+F +QDAT+F FNVS
Sbjct: 3   SKDCGSHDSHSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVS 62

Query: 62  AQ--NLISSTIQVTVASRNPNDNVGIYYDRLDVAAVYRNQQITLRTAIPANYQGHNDYNV 121
               NL++S  Q T++SRNPND +GIYYDRLDV A YR+QQITL + +   YQGH + NV
Sbjct: 63  GNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNV 122

Query: 122 WSPFLVGVNVPISPYTGAALYQDRSFGTVRLNFKLAGRVRFKVGSFTSARYHIDVDCPAT 181
           WSPF+ G +VP++PY    L QD S G + L   L GRVR+KVGSF + +YH+ V C A 
Sbjct: 123 WSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHAL 182

Query: 182 ISVGNPAAGVIVGENAVKYQLAQSCDVSL 208
           I+ G+ AAGVIVG    KY L ++C VS+
Sbjct: 183 INFGSSAAGVIVG----KYMLTETCSVSV 207

The following BLAST results are available for this feature:

BLAST of Sed0003594 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881034.1	1.7e-81	72.12	NDR1/HIN1-like protein 1 [Benincasa hispida]	[more]
XP_008462618.1	3.0e-81	71.63	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0025219.1 NDR1/HIN1-like...	[more]
XP_004143336.1	1.5e-80	71.15	NDR1/HIN1-like protein 1 [Cucumis sativus] >KGN48300.1 hypothetical protein Csa_...	[more]
XP_022978373.1	1.9e-80	71.15	NDR1/HIN1-like protein 1 [Cucurbita maxima]	[more]
XP_022926048.1	1.9e-80	71.15	NDR1/HIN1-like protein 1 [Cucurbita moschata] >KAG6604318.1 NDR1/HIN1-like prote...	[more]

BLAST of Sed0003594 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	5.6e-59	53.40	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	3.2e-54	53.93	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	6.5e-31	38.01	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ52	1.3e-15	32.30	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	6.1e-13	29.24	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]

BLAST of Sed0003594 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIT9	1.4e-81	71.63	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3CIY0	1.4e-81	71.63	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500933 PE=4 SV=1	[more]
A0A0A0KF12	7.1e-81	71.15	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G454475 PE=4 ...	[more]
A0A6J1ISX4	9.3e-81	71.15	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478384 PE=4 SV=1	[more]
A0A6J1EGY4	9.3e-81	71.15	NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111433283 PE=4 SV=1	[more]

BLAST of Sed0003594 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52470.1	1.1e-60	54.33	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	4.0e-60	53.40	NDR1/HIN1-like 1	[more]
AT2G35960.1	2.3e-55	53.93	NDR1/HIN1-like 12	[more]
AT3G44220.1	5.6e-54	52.17	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	5.6e-54	52.15	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 72..175 e-value: 1.2E-11 score: 45.0
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 10..206
None	No IPR available	PANTHER	PTHR31415:SF107	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	coord: 10..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003594.1	Sed0003594.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma