Sed0003571 (gene) Chayote v1

Overview


Name	Sed0003571
Type	gene
Organism	Sechium edule (Chayote v1)
Description	UPF0496 protein At1g20180
Location	LG11: 26783603 .. 26786989 (-)
RNA-Seq Expression	Sed0003571
Synteny	Sed0003571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACAACTTCTCTATGGACCAGCCTTAGATCTTCCATCTTTAATCCAAAAGGTTAGCTTTAACAACACTATGTTATGATGCTAACTTTTCAATCCTTGTTAATTTATTGTGTGCTAACTATATATAAAACACAATCAAATATATATCTTTTCAGATTAGGTTTGATATTATTAGTTGTTTTTTGGTATTTTGGGTATGGAGTAACTCTTCTACCTTCATATTTCCTTTGTCTTTGTTATGTGTTTTCCATGCAAATGATAACCATTTATTTGGTTGTTTTTGAAAAATTTGTCAAAGTATTTGAATTTTAACCCACTTCTAAAAACCAAAATCAAGTTTTTGGAAGGATTTTATTTTTTATTTTTGAATATATATTAAGGGAGGGGTTAGGTACCGACTCTCAGGATTGAACCTGTGATGCTGGTGATGAACTGATTTACAATCAAATAATAAAACCATTAGAATAATGATAATAATTTTATTTTCAAAATAAAAAAATAAAATGGTTATCGAGCAATATTTCATGACTAGCAAAATAAAAAATCTACCTATACTAAAATTAAAAAAAAAAAAGGTAAAAATTGATTCAATCGAGTTAAATTTTATTGCTAAGATTCAATTAATATACTTTAGCGAAAGTTAAAATATTTTCGTATATATATATTTTTTCTAAAAAATTTGCTATCATTAAAATATGGATATTGATACTAGAATTTGCACATCAAATTTTCAGGTTTTGATTTTAATTTTTTAAATTTCGCTGAAAATTCAAAATTTTTCTTACCAAGATAATAAAAGTTGGAATAAAGCTTGAACTTTAAAAAACCAAAAACAAAAGGCTAGAGCTTTTTTTTTAGCACAGTTTGTTTTAGAAACGCTATTTTATATCCATATACATTTTAGAGAGATTTCTGGTTGACAACGGCACGTTGAAAAGATGAAAAATTCCATATTCTTCTATAAACTTTACTTCTCATGTTTATCTGATATTTTCATAAAATTTTTAGTTTAACTTTTTTCTATATTTTCTATGACTAAAGGATTTGTTATTCAAATTCGAATATTGGTGAAAAAAAAACGAGGATACCAAAAATAACTTTATTTAAAAACATTCCTTGGCCTTTTATTTTATTAATTAAACATGAAGTTAGGTAGTTATTTCTTCAAAAGTCAGCCATTTTAATATGCTATCAACGTTTTCCAAAATCATTCCAATAACAAAAACGTTTTCAAAACCTCTTTAATAAATATAAAAAAAAACCCTTTTTTTATTTTATCATTATTAACTTTTAGTTTTGCTTTTAGTTTTCATCTTGATCTACATCCATATATTATCTGGAAATGACGTGTAATATAATTTTGAATTGGTCACAGAGAGATCACCATCATCGAAAAACAAGGCTATTACAAATGCCTTGTCGGGCAAGTTAAACGTTAACGAAGAATACAAACAAGCCTTCAGAACTAAATCCTACATTGAATTCACAACCACCAACAAAGACAACATGTCATCGTCGCCAACGTCGTCATGTCTGCTCGAACCGGACCAAGAGCTTCTAAACGACATGTTTCGGAGCTGCAATGGCGGCCGTGGTCACAATCTTTTAGTTGACTATTTCGAAACTAGTTTCGAAGCTTTTAAAACTTGCCAACTTCTTCTTCGAGCTGTGGACCAAATTTGTATTAACCATGCTGTTGTCAATCGAGTCATCAAGCTCACAACAAGGTCTTTAATGGCGGATAAGGACAACCTAAGTTACAACAAAAGGGAGTTGTTGTCTTCTTTCTCCCAACACAAAAACCCTTTCTCTACTCTCATCCACAATCGGTTTCTTGGCTTACACAAAACACATTCCGAGTTGCTTCGGAGACTCTCGAACGAGCGCAACGAAACTCGAAGGAAGCTAAGGTAAGCTTAAGTTGATAGATTATGATAAATTGCCAAGTTAAGCTGATTTAATTTTATACTTTTAACAAGGAATAGTTCTCACTAAGCTAAGCTTTTGATATGATTTTTTTTTCAATTTTGAATTGTGTGTTTAATAGGTTGTTAGGTTATAGGGGATTTTGTATGTATAATAAAAAAAACAAAATATTTCTATGTCTAGCATGAAAGATTAATTCATTTGTAGCTGTAAATTTAAATTGAGTTCTATCAGTGATAGAATTTAATCAGTGATAGAATTTTATCACGGATAGAAAATTATGTGCTATAAATGAAGTATTTTAGAAATTGTGCTACAAATATAATACAAAATGTGTCGTTGAGGATAGATTCTCTAGGTTATAATTAGGTTATTGTAATCAACATTTTTAAGGGTAATTTTTATATGTGTTTTTAGTTCAACGATAATTGAGATAGGTAGTTCGAACACATGACCTATTAATTATAAAATATATTTATATATGTTGAACTATTTTTCTTATTGATCAGTATAACATGAATTTATTTATATAAAAAAATAAAAAAAATTATGGCATGAATATATTAGACACCAACAAAGTTGAGTGATCTTCTTGTTTTCTTTTTTTTTTTTTTTTTTTTGAAAATTGTATAGACTAAATATGAAGTAAAATATGAAGACCTGAATAAAGTTGATAGACTAGTCAATTATATTTATTTACTTTCATAATACTCTCTTTCAATCTCGTAATTAAAAAAAGACTTCACTTGTGTGCTTAGATAAACTAATGTAGAGCCAATATAAATAACTGTAAGTATTTAGTACTATGAAATGAATCATTACCCTGTTAAATTCCTTCCATTACAATCCACATTGGGACTTATCTCAACCTAAAAGTGTAAGCAAATAGATTATAACAAATTTAAACATGTATTCATATTCTTAACCAGGTTCCAAAAGATATGGAAGAAAGCAGCCACAAGTTGTTTTATAATATCAAACGTGACGGTTCTAATCACTTTACTAGTTTTGGCTTTACACAGTCTCGTCGGTTTCGCGGCGGCACCGGGGTTGATTGTTTGCTTCACATGTTCGTCGAAGAAGAAGAGAGCTCATAAGCTCAGTTCACGGGAGCTTGTTCTTAGAAAAATGGAGGTTGCAGCGAGGGCGACGTATATAACAATGAATGATTTGGACACATTGAGTCGAATGGCAGTGAGGCTCGACGGCGAGGTGGAGCATCTAAGGGTGGTGGCCGAGATGTGGTTGAGAAGTAGCCGAAGGCGTGAGATATTGAAGGAGGTTGTGAAGGAGTTTGTTGCAGAAGAAGACGCCATTGTTGAGCAAATGAAGGAGCTTCAACAACATATATACTTGTGTTTTCTTACAATAAATAGGTCTAGAAGGCTTGTTATGAATGAAATTGTGGGAGCTAATGAAGGATCAAATTGGTTGATGACTGGTTATGTCAATGTTTGA

mRNA sequence

ATGAAAACAACTTCTCTATGGACCAGCCTTAGATCTTCCATCTTTAATCCAAAAGAGAGATCACCATCATCGAAAAACAAGGCTATTACAAATGCCTTGTCGGGCAAGTTAAACGTTAACGAAGAATACAAACAAGCCTTCAGAACTAAATCCTACATTGAATTCACAACCACCAACAAAGACAACATGTCATCGTCGCCAACGTCGTCATGTCTGCTCGAACCGGACCAAGAGCTTCTAAACGACATGTTTCGGAGCTGCAATGGCGGCCGTGGTCACAATCTTTTAGTTGACTATTTCGAAACTAGTTTCGAAGCTTTTAAAACTTGCCAACTTCTTCTTCGAGCTGTGGACCAAATTTGTATTAACCATGCTGTTGTCAATCGAGTCATCAAGCTCACAACAAGGTCTTTAATGGCGGATAAGGACAACCTAAGTTACAACAAAAGGGAGTTGTTGTCTTCTTTCTCCCAACACAAAAACCCTTTCTCTACTCTCATCCACAATCGGTTTCTTGGCTTACACAAAACACATTCCGAGTTGCTTCGGAGACTCTCGAACGAGCGCAACGAAACTCGAAGGAAGCTAAGGTTCCAAAAGATATGGAAGAAAGCAGCCACAAGTTGTTTTATAATATCAAACGTGACGGTTCTAATCACTTTACTAGTTTTGGCTTTACACAGTCTCGTCGGTTTCGCGGCGGCACCGGGGTTGATTGTTTGCTTCACATGTTCGTCGAAGAAGAAGAGAGCTCATAAGCTCAGTTCACGGGAGCTTGTTCTTAGAAAAATGGAGGTTGCAGCGAGGGCGACGTATATAACAATGAATGATTTGGACACATTGAGTCGAATGGCAGTGAGGCTCGACGGCGAGGTGGAGCATCTAAGGGTGGTGGCCGAGATGTGGTTGAGAAGTAGCCGAAGGCGTGAGATATTGAAGGAGGTTGTGAAGGAGTTTGTTGCAGAAGAAGACGCCATTGTTGAGCAAATGAAGGAGCTTCAACAACATATATACTTGTGTTTTCTTACAATAAATAGGTCTAGAAGGCTTGTTATGAATGAAATTGTGGGAGCTAATGAAGGATCAAATTGGTTGATGACTGGTTATGTCAATGTTTGA

Coding sequence (CDS)

ATGAAAACAACTTCTCTATGGACCAGCCTTAGATCTTCCATCTTTAATCCAAAAGAGAGATCACCATCATCGAAAAACAAGGCTATTACAAATGCCTTGTCGGGCAAGTTAAACGTTAACGAAGAATACAAACAAGCCTTCAGAACTAAATCCTACATTGAATTCACAACCACCAACAAAGACAACATGTCATCGTCGCCAACGTCGTCATGTCTGCTCGAACCGGACCAAGAGCTTCTAAACGACATGTTTCGGAGCTGCAATGGCGGCCGTGGTCACAATCTTTTAGTTGACTATTTCGAAACTAGTTTCGAAGCTTTTAAAACTTGCCAACTTCTTCTTCGAGCTGTGGACCAAATTTGTATTAACCATGCTGTTGTCAATCGAGTCATCAAGCTCACAACAAGGTCTTTAATGGCGGATAAGGACAACCTAAGTTACAACAAAAGGGAGTTGTTGTCTTCTTTCTCCCAACACAAAAACCCTTTCTCTACTCTCATCCACAATCGGTTTCTTGGCTTACACAAAACACATTCCGAGTTGCTTCGGAGACTCTCGAACGAGCGCAACGAAACTCGAAGGAAGCTAAGGTTCCAAAAGATATGGAAGAAAGCAGCCACAAGTTGTTTTATAATATCAAACGTGACGGTTCTAATCACTTTACTAGTTTTGGCTTTACACAGTCTCGTCGGTTTCGCGGCGGCACCGGGGTTGATTGTTTGCTTCACATGTTCGTCGAAGAAGAAGAGAGCTCATAAGCTCAGTTCACGGGAGCTTGTTCTTAGAAAAATGGAGGTTGCAGCGAGGGCGACGTATATAACAATGAATGATTTGGACACATTGAGTCGAATGGCAGTGAGGCTCGACGGCGAGGTGGAGCATCTAAGGGTGGTGGCCGAGATGTGGTTGAGAAGTAGCCGAAGGCGTGAGATATTGAAGGAGGTTGTGAAGGAGTTTGTTGCAGAAGAAGACGCCATTGTTGAGCAAATGAAGGAGCTTCAACAACATATATACTTGTGTTTTCTTACAATAAATAGGTCTAGAAGGCTTGTTATGAATGAAATTGTGGGAGCTAATGAAGGATCAAATTGGTTGATGACTGGTTATGTCAATGTTTGA

Protein sequence

MKTTSLWTSLRSSIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNMSSSPTSSCLLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRVIKLTTRSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSKKKRAHKLSSRELVLRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEIVGANEGSNWLMTGYVNV

Homology

[Close]

BLAST of Sed0003571 vs. NCBI nr
Match: XP_038884832.1 (UPF0496 protein At1g20180-like [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 4.2e-110
Identity = 244/375 (65.07%), Postives = 290/375 (77.33%), Query Frame = 0


Query: 4   TSLWTSLRSSIFNPKERSPS-SKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTT--NK 63
           TSLWTSLRS+I N KERS S  KNKAI NALS KLN+NEEY+ AFRT SY+EFTTT  NK
Sbjct: 3   TSLWTSLRSTISNLKERSSSLKKNKAIRNALSNKLNLNEEYQAAFRTNSYVEFTTTNNNK 62

Query: 64  DNMSSSPTSSCLLEPDQELLNDMFRSC-NGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQ 123
           DN SSS   SCLLEPDQ++     +SC NGG  H+LL++YF  SFEAFK+CQLLL+A+ Q
Sbjct: 63  DNTSSSSLLSCLLEPDQDV---FLQSCNNGGHVHHLLIEYFHASFEAFKSCQLLLQALHQ 122

Query: 124 ICINHA-VVNRVIKLTTRSLMADKDN---LSYNKRE--LLSSFSQHKNP-FSTLIH--NR 183
             INHA +VNRV KLTT +LMAD D+   L Y + +  LLSSF Q KNP FS L H   +
Sbjct: 123 TRINHAIIVNRVAKLTTTALMADDDDNCGLVYREDQLMLLSSFCQLKNPNFSILAHIDGQ 182

Query: 184 FLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLV 243
           FL LH++HSELL++L+ +RNE RR+LR ++IWK+AA  CF+ISN  VL+ LL+LA HSL+
Sbjct: 183 FLRLHESHSELLQKLTCKRNEIRRELRLKRIWKRAARGCFLISNAAVLVALLLLAFHSLI 242

Query: 244 GFAAAPGLIVCFT--CSSKKKRAHK-LSSRELVLRKMEVAARATYITMNDLDTLSRMAVR 303
           G  AAPGLI CF      KK+R +K + S E+VLR+ME+AARATYITMNDLDTLSRMA R
Sbjct: 243 GIVAAPGLITCFVGLLKKKKRRDYKVVFSSEMVLRQMEIAARATYITMNDLDTLSRMAAR 302

Query: 304 LDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRS 363
           LD EVEHLR V EM++RSSRR EIL    KEFV E+DA+VEQMK+LQQHIYLC LTINRS
Sbjct: 303 LDVEVEHLRAVCEMYIRSSRRCEIL----KEFVVEDDAVVEQMKDLQQHIYLCLLTINRS 362

[Close]

BLAST of Sed0003571 vs. NCBI nr
Match: XP_023002422.1 (UPF0496 protein At1g20180 isoform X1 [Cucurbita maxima])

HSP 1 Score: 392.5 bits (1007), Expect = 4.0e-105
Identity = 230/350 (65.71%), Postives = 256/350 (73.14%), Query Frame = 0


Query: 13  SIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNMSSS--PTSS 72
           S+FN  +RS S KNKAI NALS KLN+NEEYKQAFRT S+IEFTTT KDN +SS  P   
Sbjct: 8   SLFNKTDRSSSDKNKAIMNALSRKLNINEEYKQAFRTTSFIEFTTTYKDNNTSSSPPPPP 67

Query: 73  CLLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRV 132
           C LEPDQ+LL+DM RSCNG   H LL++YFE SF+AFK CQLLL+AV Q  INHAVV   
Sbjct: 68  CRLEPDQKLLHDMLRSCNGRHVHPLLLEYFEASFQAFKACQLLLQAVHQTRINHAVV--- 127

Query: 133 IKLTTRSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLHKTHSELLRRLSNERN 192
            KL T + MAD DN S N   +             +    FL LH  HSELLR+LS  RN
Sbjct: 128 -KLATTASMADDDNQSSNNNGM-------------VYKELFLSLHDLHSELLRKLSCLRN 187

Query: 193 ETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSKKKR 252
           ETR+KLR +   KK AT CF+ISN  VLITLLVLALHSLVG  A PGLIVCF  S KKKR
Sbjct: 188 ETRKKLRLRCFRKKVATGCFVISNAAVLITLLVLALHSLVGIVAMPGLIVCFVGSLKKKR 247

Query: 253 AHKLSSRELVLRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEMWLRSSRRRE 312
                  + +LR+ME+AARATYITMNDLDTLSRMAVRLDGEVEHLR V  MW+RS R RE
Sbjct: 248 ----RDHKGILRQMEIAARATYITMNDLDTLSRMAVRLDGEVEHLRAVGGMWMRSGRMRE 307

Query: 313 ILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEIVGANE 361
           IL    KEFV E+DAIVEQMKELQQHIYLCF+TINRSRRLVMNEIV A +
Sbjct: 308 IL----KEFVEEDDAIVEQMKELQQHIYLCFVTINRSRRLVMNEIVEAKD 332

[Close]

BLAST of Sed0003571 vs. NCBI nr
Match: KAG6585525.1 (UPF0496 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-100
Identity = 223/365 (61.10%), Postives = 257/365 (70.41%), Query Frame = 0


Query: 4   TSLWTSLRSSIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNM 63
           TS W SL    FN  +RS S KNKAI NALS KLN+NEEYKQAFRT S+IEFTTTNKDN 
Sbjct: 3   TSHWISL----FNKTDRSSSDKNKAIMNALSRKLNINEEYKQAFRTTSFIEFTTTNKDNN 62

Query: 64  SSSPTSS--------CLLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLR 123
           + S +SS        C LEPDQ+LL +MFRSCNG   H LL++YFE SF+AFK CQ LL+
Sbjct: 63  TISSSSSSLPPSPPPCRLEPDQKLLTEMFRSCNGRHVHPLLLEYFEASFQAFKACQFLLQ 122

Query: 124 AVDQICINHAVVNRVIKLTTRSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLH 183
            V Q  INHA V         + MAD D+            +Q  +    +    FLGLH
Sbjct: 123 TVHQTRINHAAVE------LATTMADDDD------------NQSSDNNGMVYRELFLGLH 182

Query: 184 KTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAA 243
             HSELLR+LS  RN+TRRKLR ++  KK AT CF+ISN+ VL+ LLVLALHSLVG  A 
Sbjct: 183 DIHSELLRKLSCLRNDTRRKLRLRRFGKKVATGCFVISNMAVLVALLVLALHSLVGIVAM 242

Query: 244 PGLIVCFTCSSKKKRAHKLSSRELVLRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHL 303
           PGLIVCF  S KKKR       + +LR+ME+AARATYITMNDLDTLS+MAVRLDGEVEHL
Sbjct: 243 PGLIVCFVGSLKKKR----RDHKGILRQMEIAARATYITMNDLDTLSQMAVRLDGEVEHL 302

Query: 304 RVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEI 361
           R VA MW+RS   REIL    KEF+ E+DAIVEQ+KELQQHIYLC +TINRSRRLVMNEI
Sbjct: 303 RAVAGMWMRSGGMREIL----KEFIEEDDAIVEQLKELQQHIYLCCVTINRSRRLVMNEI 337

[Close]

BLAST of Sed0003571 vs. NCBI nr
Match: XP_023538283.1 (UPF0496 protein At1g20180 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.5 bits (968), Expect = 1.3e-100
Identity = 227/363 (62.53%), Postives = 256/363 (70.52%), Query Frame = 0


Query: 4   TSLWTSLRSSIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDN- 63
           TS W SL    FN  +RS S KNKAI NALS KLN+NEEYKQAFRT S+IEFTTTNKDN 
Sbjct: 3   TSHWISL----FNKTDRSSSDKNKAIMNALSRKLNINEEYKQAFRTTSFIEFTTTNKDNN 62

Query: 64  -MSSSPTSS---CLLEPDQELLNDMFRSCNGGR-GHNLLVDYFETSFEAFKTCQLLLRAV 123
            +SSSP  S   C LEPDQ+LL +MF+SCNG   GH LL++YFE SF+AFK CQ LL+ V
Sbjct: 63  TISSSPPPSPPPCRLEPDQKLLTEMFQSCNGRHVGHPLLLEYFEASFQAFKACQFLLQTV 122

Query: 124 DQICINHAVVNRVIKLTTRSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLHKT 183
            Q  INHA V         + MAD DN S +   +             +    FL LH T
Sbjct: 123 HQTRINHATVE------LATTMADDDNQSSDNNGM-------------VYRELFLSLHDT 182

Query: 184 HSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAPG 243
           HSELLR+LS  RN TRRKLR ++  KK A  CF+ISN  VL+ LLVLALHSLVG  A PG
Sbjct: 183 HSELLRKLSCLRNNTRRKLRLRRFGKKVARGCFVISNTAVLVALLVLALHSLVGIVAMPG 242

Query: 244 LIVCFTCSSKKKRAHKLSSRELVLRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHLRV 303
           LIVCF  S KKKR       + +LR+ME+AARATYITMNDLDTLSRMAVRLDGEVEHLR 
Sbjct: 243 LIVCFVGSLKKKR----RDHKGILRQMEIAARATYITMNDLDTLSRMAVRLDGEVEHLRA 302

Query: 304 VAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEIVG 361
           VA MW+RS   REIL    KEFV E+DAIVEQ+KELQQHIYLC +TINRSRRLVMNEIVG
Sbjct: 303 VAGMWMRSGGMREIL----KEFVEEDDAIVEQLKELQQHIYLCCVTINRSRRLVMNEIVG 334

[Close]

BLAST of Sed0003571 vs. NCBI nr
Match: XP_023002423.1 (UPF0496 protein At1g20180 isoform X2 [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 1.9e-99
Identity = 219/332 (65.96%), Postives = 243/332 (73.19%), Query Frame = 0


Query: 31  NALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNMSSS--PTSSCLLEPDQELLNDMFRSCN 90
           NALS KLN+NEEYKQAFRT S+IEFTTT KDN +SS  P   C LEPDQ+LL+DM RSCN
Sbjct: 2   NALSRKLNINEEYKQAFRTTSFIEFTTTYKDNNTSSSPPPPPCRLEPDQKLLHDMLRSCN 61

Query: 91  GGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRVIKLTTRSLMADKDNLSYN 150
           G   H LL++YFE SF+AFK CQLLL+AV Q  INHAVV    KL T + MAD DN S N
Sbjct: 62  GRHVHPLLLEYFEASFQAFKACQLLLQAVHQTRINHAVV----KLATTASMADDDNQSSN 121

Query: 151 KRELLSSFSQHKNPFSTLIHNRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATS 210
              +             +    FL LH  HSELLR+LS  RNETR+KLR +   KK AT 
Sbjct: 122 NNGM-------------VYKELFLSLHDLHSELLRKLSCLRNETRKKLRLRCFRKKVATG 181

Query: 211 CFIISNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSKKKRAHKLSSRELVLRKMEVAA 270
           CF+ISN  VLITLLVLALHSLVG  A PGLIVCF  S KKKR       + +LR+ME+AA
Sbjct: 182 CFVISNAAVLITLLVLALHSLVGIVAMPGLIVCFVGSLKKKR----RDHKGILRQMEIAA 241

Query: 271 RATYITMNDLDTLSRMAVRLDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVE 330
           RATYITMNDLDTLSRMAVRLDGEVEHLR V  MW+RS R REIL    KEFV E+DAIVE
Sbjct: 242 RATYITMNDLDTLSRMAVRLDGEVEHLRAVGGMWMRSGRMREIL----KEFVEEDDAIVE 301

Query: 331 QMKELQQHIYLCFLTINRSRRLVMNEIVGANE 361
           QMKELQQHIYLCF+TINRSRRLVMNEIV A +
Sbjct: 302 QMKELQQHIYLCFVTINRSRRLVMNEIVEAKD 308

[Close]

BLAST of Sed0003571 vs. ExPASy Swiss-Prot
Match: Q6DYE5 (UPF0496 protein At1g20180 OS=Arabidopsis thaliana OX=3702 GN=At1g20180 PE=2 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-52
Identity = 143/370 (38.65%), Postives = 222/370 (60.00%), Query Frame = 0


Query: 26  NKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNM-----------SSSPTSSC--- 85
           +K    +L+ KL+VNEEYK+AFRT SY+E  T  +D +           S SP+SS    
Sbjct: 23  DKECCRSLTSKLSVNEEYKEAFRTNSYLETRTKAEDQLGITSCSKLSSSSPSPSSSSDLS 82

Query: 86  --------LLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICIN 145
                   LL+P QE L+ + +  +     NL+V +F+ S EA   C+ LL+ + QI IN
Sbjct: 83  FHSHFTDYLLDPPQETLDALMQDSS---LDNLIVTFFDLSSEACDVCETLLQCLQQIKIN 142

Query: 146 HAVVNRVIKLTTR------SLMADKDNLSYNKRELLSSFSQHKNPFSTLIHN-RFLGLHK 205
           H  + RV+K+  R      +L    + L     + LS F+  KNP   +++  +F  +H 
Sbjct: 143 HNKIKRVMKIGKRVCNGAKTLECSPEMLCALIFQELSRFAALKNPLCRIVNEAQFRIVHD 202

Query: 206 THSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAP 265
            +S+LL +L++++   RRK+RF K  KK      +I++  ++ITLL++ALHS++G  AAP
Sbjct: 203 ANSDLLTKLTSKKRRIRRKIRFFKFCKKLGGYSLVITHSAIVITLLIIALHSILGVFAAP 262

Query: 266 GLI-VCFTCSSKKKRA----HKLSSRELVLRKM----EVAARATYITMNDLDTLSRMAVR 325
            L+ +C  C  +KK+A    HK S+++  L K+    ++AA+  +I +NDLDTLSR+A R
Sbjct: 263 ALLGLCSFCLLRKKKAKGRMHK-SNKDTTLEKLGTQIDIAAKGMFILINDLDTLSRLAGR 322

Query: 326 LDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRS 358
           L  E+EH + VA M  + SR+ E+LKE ++EF   E+   +Q++EL++H+YLCF TINRS
Sbjct: 323 LCDEIEHRKTVAAMCAK-SRKIEVLKEALREFNGHEEKFSDQLQELEEHLYLCFHTINRS 382

[Close]

BLAST of Sed0003571 vs. ExPASy Swiss-Prot
Match: Q9SMU4 (UPF0496 protein At3g49070 OS=Arabidopsis thaliana OX=3702 GN=At3g49070 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.9e-26
Identity = 117/392 (29.85%), Postives = 188/392 (47.96%), Query Frame = 0


Query: 1   MKTTSLWTSLRSSIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTT--- 60
           +K +S+ T+  SS  NPK+                 ++V EEY  AFRT+SY  F T   
Sbjct: 49  LKLSSIGTASGSS--NPKD--------------GADVDVREEYANAFRTESYNHFWTRVV 108

Query: 61  --TNKDNMSSSPTSS--------------------CLLEPDQELLNDMFRSCNGGR-GHN 120
             + K +  SS +SS                     LL+PD   +  +      GR    
Sbjct: 109 QLSRKKSAVSSSSSSPPIESSSTSARLMSYRLFAHNLLDPDLNTITRILDVSRVGRHTRT 168

Query: 121 LLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRVIKLTTRSLMADKDNLSYNKRELLS 180
           LL DYF  +  AF  C  LL+      I+H      ++    SL     + ++N   L+ 
Sbjct: 169 LLSDYFLETANAFLLCTQLLKN-----IHH------LRSKYESLKPKFHSENHNSLALID 228

Query: 181 SFSQHKNPFSTLIH--NRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFII 240
            F++    F   I   +R   +      LL+RL + R++TR KL+       ++    + 
Sbjct: 229 QFTEISKWFDPFISSGSRIQLIRSGCLYLLKRLESRRDKTRAKLKLINGLTHSSGLLVLA 288

Query: 241 SNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSKKKRAHKLSSRELVLRKMEVAARATY 300
              T+++T   +A H+   F AAP L+     +S+ K A   +       +++VAA+ TY
Sbjct: 289 LTTTLIVT---IASHAFALFLAAPTLL-----ASQFKPAGLRNKLTKTAARLDVAAKGTY 348

Query: 301 ITMNDLDTLSRMAVRLDGEVEHLRVVAEMWL-RSSRRREILKEVVKEFVAEEDAIVEQMK 360
           I   DLDT+SR+  R++ EV H+R +AE W+ R S R    +EV +E    E++  E++ 
Sbjct: 349 ILSRDLDTISRLVTRINDEVNHVRAMAEFWVGRGSGRVRGSEEVARELKRCEESFSEELD 405

Query: 361 ELQQHIYLCFLTINRSRRLVMNEIVGANEGSN 364
           EL++HIYLCF+TINR+R L++ EI+ +++  N
Sbjct: 409 ELEEHIYLCFMTINRARNLLVKEILDSDDPPN 405

[Close]

BLAST of Sed0003571 vs. ExPASy Swiss-Prot
Match: A2YH25 (Putative UPF0496 protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_023618 PE=3 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-22
Identity = 86/271 (31.73%), Postives = 135/271 (49.82%), Query Frame = 0


Query: 91  RGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRVIKLTTRSLMADKDNLSYNKR 150
           R   LL++YF+ + EA + C  LL A+     +H  + R   L  R    D D    + +
Sbjct: 122 RVETLLIEYFDVTEEACEACSALLAAIGAARRHHLTLRR---LLLRLDGGDDD----DAK 181

Query: 151 ELLSSFSQHKNPFSTLIHNRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCF 210
           + L+   +  NP S    + F  +H   S L  RL+  +   RR  R  +I +  A +  
Sbjct: 182 DALARHVRLDNPLSPGSLSEFHDVHARCSPLASRLAAAQRRLRRLARALRIARGTAAAAL 241

Query: 211 IISNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSS----KKKRAHKLSSRELVL--RKM 270
           + +    ++  +VLA H+LVG   A          +     ++ A K+SSR        +
Sbjct: 242 VGACAAAIVAAVVLAAHALVGIGVAAAAFGATPAGAARWWARRAAEKVSSRHYARAGATL 301

Query: 271 EVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEED 330
           + AAR  YI   DLDT+SRM  R   E+EH R VA + +R    R +L+EV +E    E+
Sbjct: 302 DAAARGAYIVGRDLDTVSRMVRRAHDELEHGRDVARIAMRGHGERPLLQEVAREEEECEE 361

Query: 331 AIVEQMKELQQHIYLCFLTINRSRRLVMNEI 356
            +  Q+ EL++H+ LC +TINR+RRLV +E+
Sbjct: 362 DLRAQLAELEEHVCLCLITINRTRRLVAHEM 385

[Close]

BLAST of Sed0003571 vs. ExPASy Swiss-Prot
Match: Q5Z8N6 (Putative UPF0496 protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0718300 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-22
Identity = 86/271 (31.73%), Postives = 135/271 (49.82%), Query Frame = 0


Query: 91  RGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRVIKLTTRSLMADKDNLSYNKR 150
           R   LL++YF+ + EA + C  LL A+     +H  + R   L  R    D D    + +
Sbjct: 122 RVETLLIEYFDVTEEACEACSALLAAIGAARRHHLTLRR---LLLRLDGGDDD----DAK 181

Query: 151 ELLSSFSQHKNPFSTLIHNRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCF 210
           + L+   +  NP S    + F  +H   S L  RL+  +   RR  R  +I +  A +  
Sbjct: 182 DALARHVRLDNPLSPGSLSEFHDVHARCSPLASRLAAAQRRLRRLARALRIARGTAAAAL 241

Query: 211 IISNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSK----KKRAHKLSSRELVL--RKM 270
           + +    ++  +VLA H+LVG   A          +     ++ A K+SSR        +
Sbjct: 242 VGACAAAIVAAVVLAAHALVGIGVAAAAFGATPAGAARWWGRRAAEKVSSRHYARAGATL 301

Query: 271 EVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEED 330
           + AAR  YI   DLDT+SRM  R   E+EH R VA + +R    R +L+EV +E    E+
Sbjct: 302 DAAARGAYIVGRDLDTVSRMVRRAHDELEHGRDVARIAMRGHGERPLLQEVAREEEECEE 361

Query: 331 AIVEQMKELQQHIYLCFLTINRSRRLVMNEI 356
            +  Q+ EL++H+ LC +TINR+RRLV +E+
Sbjct: 362 DLRAQLAELEEHVCLCLITINRTRRLVAHEM 385

[Close]

BLAST of Sed0003571 vs. ExPASy Swiss-Prot
Match: A2XCJ1 (UPF0496 protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_009784 PE=3 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-17
Identity = 93/363 (25.62%), Postives = 163/363 (44.90%), Query Frame = 0


Query: 32  ALSGKLNVNEEYKQAFRTKSYIEF------------------------TTTNKDNMSSSP 91
           A S   +  EEY  AFRT+SY +F                           +K   S   
Sbjct: 27  APSSSFDFREEYTSAFRTESYNDFWARVLDITLAHGAALVPRHGGGGGCAASKRLPSYRL 86

Query: 92  TSSCLLEPDQELLNDMFRSCNGGR----GHNLLVDYFETSFEAFKTCQLLLRAVDQICIN 151
            +  LLEPDQ  +     S  G R       LL  Y+  +  A   C  LL+ ++ I + 
Sbjct: 87  FAEHLLEPDQRAVAAALASPRGSRLRPDVRGLLAAYYAETANASFLCSHLLKDIEHIRLR 146

Query: 152 HAVVNRVIKLTTRSLMADKDNLSYNKRELLSSFSQHKNPFSTLI--HNRFLGLHKTHSEL 211
           +    R +K T R L +D          L    +    PF+ L     R   +     +L
Sbjct: 147 Y----RPLKHTLRKLASD-----VGVSGLADVSAALGQPFTALAASQGRLREVQAGSGDL 206

Query: 212 LRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAPGLIVC 271
           LR L   R + R ++R     ++A +  F+ +   V +    + +H L  FAA P +   
Sbjct: 207 LRGLDAGRKKARHRIRSVARLRRALSVSFVTAVAVVAVVGACIGVHILAAFAAFPMMSPA 266

Query: 272 FTCSSKKKRAHKLSSRELVLRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEM 331
           +    ++  + + + R LV  ++E AA+ TYI   D++T+SR+  R+  E EH+  +  +
Sbjct: 267 WL--GERFFSGRAARRALV--QLEAAAKGTYILNRDMETISRLVARVRDEGEHMVALLRL 326

Query: 332 WLR------SSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEI 359
            +       +  +  +++EV+++    E++  +Q+ EL++H++LCF+TIN++R +VMN +
Sbjct: 327 CVEHRPAAGAGGKGRLVQEVLRQLSKNEESFRQQLDELEEHLFLCFMTINKARIMVMNFM 376

[Close]

BLAST of Sed0003571 vs. ExPASy TrEMBL
Match: A0A6J1KJG4 (UPF0496 protein At1g20180 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496268 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 2.0e-105
Identity = 230/350 (65.71%), Postives = 256/350 (73.14%), Query Frame = 0


Query: 13  SIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNMSSS--PTSS 72
           S+FN  +RS S KNKAI NALS KLN+NEEYKQAFRT S+IEFTTT KDN +SS  P   
Sbjct: 8   SLFNKTDRSSSDKNKAIMNALSRKLNINEEYKQAFRTTSFIEFTTTYKDNNTSSSPPPPP 67

Query: 73  CLLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRV 132
           C LEPDQ+LL+DM RSCNG   H LL++YFE SF+AFK CQLLL+AV Q  INHAVV   
Sbjct: 68  CRLEPDQKLLHDMLRSCNGRHVHPLLLEYFEASFQAFKACQLLLQAVHQTRINHAVV--- 127

Query: 133 IKLTTRSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLHKTHSELLRRLSNERN 192
            KL T + MAD DN S N   +             +    FL LH  HSELLR+LS  RN
Sbjct: 128 -KLATTASMADDDNQSSNNNGM-------------VYKELFLSLHDLHSELLRKLSCLRN 187

Query: 193 ETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSKKKR 252
           ETR+KLR +   KK AT CF+ISN  VLITLLVLALHSLVG  A PGLIVCF  S KKKR
Sbjct: 188 ETRKKLRLRCFRKKVATGCFVISNAAVLITLLVLALHSLVGIVAMPGLIVCFVGSLKKKR 247

Query: 253 AHKLSSRELVLRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEMWLRSSRRRE 312
                  + +LR+ME+AARATYITMNDLDTLSRMAVRLDGEVEHLR V  MW+RS R RE
Sbjct: 248 ----RDHKGILRQMEIAARATYITMNDLDTLSRMAVRLDGEVEHLRAVGGMWMRSGRMRE 307

Query: 313 ILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEIVGANE 361
           IL    KEFV E+DAIVEQMKELQQHIYLCF+TINRSRRLVMNEIV A +
Sbjct: 308 IL----KEFVEEDDAIVEQMKELQQHIYLCFVTINRSRRLVMNEIVEAKD 332

[Close]

BLAST of Sed0003571 vs. ExPASy TrEMBL
Match: A0A6J1KTI4 (UPF0496 protein At1g20180 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496268 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 9.4e-100
Identity = 219/332 (65.96%), Postives = 243/332 (73.19%), Query Frame = 0


Query: 31  NALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNMSSS--PTSSCLLEPDQELLNDMFRSCN 90
           NALS KLN+NEEYKQAFRT S+IEFTTT KDN +SS  P   C LEPDQ+LL+DM RSCN
Sbjct: 2   NALSRKLNINEEYKQAFRTTSFIEFTTTYKDNNTSSSPPPPPCRLEPDQKLLHDMLRSCN 61

Query: 91  GGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRVIKLTTRSLMADKDNLSYN 150
           G   H LL++YFE SF+AFK CQLLL+AV Q  INHAVV    KL T + MAD DN S N
Sbjct: 62  GRHVHPLLLEYFEASFQAFKACQLLLQAVHQTRINHAVV----KLATTASMADDDNQSSN 121

Query: 151 KRELLSSFSQHKNPFSTLIHNRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATS 210
              +             +    FL LH  HSELLR+LS  RNETR+KLR +   KK AT 
Sbjct: 122 NNGM-------------VYKELFLSLHDLHSELLRKLSCLRNETRKKLRLRCFRKKVATG 181

Query: 211 CFIISNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSKKKRAHKLSSRELVLRKMEVAA 270
           CF+ISN  VLITLLVLALHSLVG  A PGLIVCF  S KKKR       + +LR+ME+AA
Sbjct: 182 CFVISNAAVLITLLVLALHSLVGIVAMPGLIVCFVGSLKKKR----RDHKGILRQMEIAA 241

Query: 271 RATYITMNDLDTLSRMAVRLDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVE 330
           RATYITMNDLDTLSRMAVRLDGEVEHLR V  MW+RS R REIL    KEFV E+DAIVE
Sbjct: 242 RATYITMNDLDTLSRMAVRLDGEVEHLRAVGGMWMRSGRMREIL----KEFVEEDDAIVE 301

Query: 331 QMKELQQHIYLCFLTINRSRRLVMNEIVGANE 361
           QMKELQQHIYLCF+TINRSRRLVMNEIV A +
Sbjct: 302 QMKELQQHIYLCFVTINRSRRLVMNEIVEAKD 308

[Close]

BLAST of Sed0003571 vs. ExPASy TrEMBL
Match: A0A6J1GIK9 (UPF0496 protein At1g20180 OS=Cucurbita moschata OX=3662 GN=LOC111454488 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 9.4e-100
Identity = 224/365 (61.37%), Postives = 255/365 (69.86%), Query Frame = 0


Query: 4   TSLWTSLRSSIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNM 63
           TS W SL    FN  +RS S KNKAI NALS KLN+NEEYKQAFRT S+IEFTTTNKDN 
Sbjct: 3   TSHWISL----FNKTDRSSSDKNKAIMNALSRKLNINEEYKQAFRTTSFIEFTTTNKDNN 62

Query: 64  SSSPTSS--------CLLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLR 123
           + S +SS        C LEPDQ+LL +MFRSCNG   H LL++YFE SF+AFK CQ LL+
Sbjct: 63  TISSSSSSLPPSPPPCRLEPDQKLLTEMFRSCNGRHVHPLLLEYFEASFQAFKACQFLLQ 122

Query: 124 AVDQICINHAVVNRVIKLTTRSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLH 183
            V Q  INHA V         + MAD D+            +Q  +    +    FLGLH
Sbjct: 123 TVHQTRINHAAVE------LATTMADDDD------------NQSSDNNGMVYRELFLGLH 182

Query: 184 KTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAA 243
             HSELLR+LS  RN TRRKLR ++  KK AT CF+ISN  VL+ LLVLALHSLVG  A 
Sbjct: 183 DIHSELLRKLSCLRN-TRRKLRLRRFGKKVATGCFVISNTAVLVALLVLALHSLVGIVAM 242

Query: 244 PGLIVCFTCSSKKKRAHKLSSRELVLRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHL 303
           PGLIVCF  S KKKR       + +LR+ME+AARATYITMNDLDTLSRMAVRLDGEVEHL
Sbjct: 243 PGLIVCFVGSLKKKR----RDHKGILRQMEIAARATYITMNDLDTLSRMAVRLDGEVEHL 302

Query: 304 RVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEI 361
           R VA MW+RS   REIL    KEF+ E+DAIVEQ+KELQQHIYLC +TINRSRRLVMNEI
Sbjct: 303 RAVAGMWMRSGGMREIL----KEFIEEDDAIVEQLKELQQHIYLCCVTINRSRRLVMNEI 336

[Close]

BLAST of Sed0003571 vs. ExPASy TrEMBL
Match: A0A1S3BDA5 (UPF0496 protein At1g20180-like OS=Cucumis melo OX=3656 GN=LOC103488392 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 6.1e-99
Identity = 227/377 (60.21%), Postives = 283/377 (75.07%), Query Frame = 0


Query: 1   MKTTSLWTSLRSSIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNK 60
           MKT+S+WTSLRS+I N KERS S KNKA  NALS KLN+NEEY+ AFRT SY+EFT T  
Sbjct: 1   MKTSSVWTSLRSAISNLKERSSSKKNKANANALSNKLNLNEEYQAAFRTNSYVEFTATTN 60

Query: 61  DNMSSSPTS--SCLLEPDQELLNDMFRSCNGGRGHN--LLVDYFETSFEAFKTCQLLLRA 120
           +  SSS +S  SCLL+PDQ++L+++  + NGG  HN  LL+ YF+ SFEAF+TC+LLL+A
Sbjct: 61  NTSSSSSSSLMSCLLQPDQDMLHNI--TSNGGHVHNHDLLIQYFQASFEAFETCRLLLQA 120

Query: 121 VDQICINHAV-VNRVIKLTTRSLMADKDN-----LSYNKRE---LLSSFSQHKNP-FS-- 180
           ++Q  INH + VN  IKLT  +L A+ D+     L Y + +    LSSFS  K+P FS  
Sbjct: 121 LNQTKINHHILVNATIKLTAMALRAEDDDNGNHGLVYGEDDRLISLSSFSHLKDPNFSIL 180

Query: 181 TLIHNRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVL 240
           T I  RFL LH++HSELL++L+++RNETR KLR +++ K+AA  C +ISN  VL+ LL+L
Sbjct: 181 TRIGGRFLALHESHSELLQKLASKRNETRSKLRLKRLRKRAAKGCLLISNAAVLVALLLL 240

Query: 241 ALHSLVGFAAAPGLIV-CFTCSSKK--KRAHKLS-SRELVLRKMEVAARATYITMNDLDT 300
           ALHSLVG  AAPGL++ CF    KK  KR +KL  + E  L++ME+AAR TYITMNDLDT
Sbjct: 241 ALHSLVGIVAAPGLLIACFVGLLKKKVKRDYKLPFTLETSLQQMEIAARGTYITMNDLDT 300

Query: 301 LSRMAVRLDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLC 358
           LSRMA RLD EVEHLR V EMW+RSSR      E++KEFV E++AIVEQMKELQQHIYLC
Sbjct: 301 LSRMAARLDVEVEHLRAVGEMWMRSSRSG---CEILKEFVVEDEAIVEQMKELQQHIYLC 360

[Close]

BLAST of Sed0003571 vs. ExPASy TrEMBL
Match: A0A0A0LN80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346030 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 4.8e-96
Identity = 224/377 (59.42%), Postives = 276/377 (73.21%), Query Frame = 0


Query: 1   MKTTSLWTSLRS--SIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTTT 60
           MKT+S+WTSLRS  SI   +ERS S KNKA  NALS KLN+NEEY+ AFRT SY+EFT  
Sbjct: 1   MKTSSVWTSLRSAISILKGRERSSSKKNKANANALSNKLNLNEEYQAAFRTNSYVEFTAI 60

Query: 61  NKDNMSSSPTSSCLLEPDQELLNDMFRSCNGG--RGHNLLVDYFETSFEAFKTCQLLLRA 120
             +  S S   SCLLEPDQ++L     S NGG    H+LL+ YF+ SFEAF+TCQLLL+A
Sbjct: 61  TNNTSSPSSLISCLLEPDQDMLLHNITS-NGGHVHDHDLLIQYFQASFEAFETCQLLLQA 120

Query: 121 VDQICINHAV-VNRVIKLTTRSLMA-DKDNLSYNK-------RELLSSFSQHKNP-FSTL 180
           ++Q  INH + VN  +KLTT +L A D DN ++ +         L S FS+ KNP FS L
Sbjct: 121 LNQTKINHHILVNATVKLTTMALRAGDDDNGNHGRVYGEDDPLILSSFFSRLKNPNFSIL 180

Query: 181 --IHNRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVL 240
             I +RFL LH++HSELL++L++++NETRRKLR ++I K+ A  C +ISN  VL+ LL+L
Sbjct: 181 NQIGSRFLALHESHSELLQKLASKQNETRRKLRLKRIRKRVAKGCLLISNAAVLVALLLL 240

Query: 241 ALHSLVGFAAAPGLIV-CFTCSSKK--KRAHKLS-SRELVLRKMEVAARATYITMNDLDT 300
           ALHSLVG  AAPGL++ CF    KK  KR +KL  + E  L++ME+AAR TYITMNDLDT
Sbjct: 241 ALHSLVGIVAAPGLLIACFVGLLKKKVKRDYKLPFTPETSLQQMEIAARGTYITMNDLDT 300

Query: 301 LSRMAVRLDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLC 358
           LSRMA RLD EVEHLR V EMW+RSSR R    E++KEFV E++AIVEQMKELQQHIYLC
Sbjct: 301 LSRMAARLDVEVEHLRAVGEMWMRSSRSR---CEILKEFVVEDEAIVEQMKELQQHIYLC 360

[Close]

BLAST of Sed0003571 vs. TAIR 10
Match: AT1G20180.1 (Protein of unknown function (DUF677) )

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-53
Identity = 143/370 (38.65%), Postives = 222/370 (60.00%), Query Frame = 0


Query: 26  NKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNM-----------SSSPTSSC--- 85
           +K    +L+ KL+VNEEYK+AFRT SY+E  T  +D +           S SP+SS    
Sbjct: 23  DKECCRSLTSKLSVNEEYKEAFRTNSYLETRTKAEDQLGITSCSKLSSSSPSPSSSSDLS 82

Query: 86  --------LLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICIN 145
                   LL+P QE L+ + +  +     NL+V +F+ S EA   C+ LL+ + QI IN
Sbjct: 83  FHSHFTDYLLDPPQETLDALMQDSS---LDNLIVTFFDLSSEACDVCETLLQCLQQIKIN 142

Query: 146 HAVVNRVIKLTTR------SLMADKDNLSYNKRELLSSFSQHKNPFSTLIHN-RFLGLHK 205
           H  + RV+K+  R      +L    + L     + LS F+  KNP   +++  +F  +H 
Sbjct: 143 HNKIKRVMKIGKRVCNGAKTLECSPEMLCALIFQELSRFAALKNPLCRIVNEAQFRIVHD 202

Query: 206 THSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAP 265
            +S+LL +L++++   RRK+RF K  KK      +I++  ++ITLL++ALHS++G  AAP
Sbjct: 203 ANSDLLTKLTSKKRRIRRKIRFFKFCKKLGGYSLVITHSAIVITLLIIALHSILGVFAAP 262

Query: 266 GLI-VCFTCSSKKKRA----HKLSSRELVLRKM----EVAARATYITMNDLDTLSRMAVR 325
            L+ +C  C  +KK+A    HK S+++  L K+    ++AA+  +I +NDLDTLSR+A R
Sbjct: 263 ALLGLCSFCLLRKKKAKGRMHK-SNKDTTLEKLGTQIDIAAKGMFILINDLDTLSRLAGR 322

Query: 326 LDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRS 358
           L  E+EH + VA M  + SR+ E+LKE ++EF   E+   +Q++EL++H+YLCF TINRS
Sbjct: 323 LCDEIEHRKTVAAMCAK-SRKIEVLKEALREFNGHEEKFSDQLQELEEHLYLCFHTINRS 382

[Close]

BLAST of Sed0003571 vs. TAIR 10
Match: AT1G20180.2 (Protein of unknown function (DUF677) )

HSP 1 Score: 170.6 bits (431), Expect = 2.3e-42
Identity = 130/370 (35.14%), Postives = 202/370 (54.59%), Query Frame = 0


Query: 26  NKAITNALSGKLNVNEEYKQAFRTKSYIEFTTTNKDNM-----------SSSPTSSC--- 85
           +K    +L+ KL+VNEEYK+AFRT SY+E  T  +D +           S SP+SS    
Sbjct: 23  DKECCRSLTSKLSVNEEYKEAFRTNSYLETRTKAEDQLGITSCSKLSSSSPSPSSSSDLS 82

Query: 86  --------LLEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICIN 145
                   LL+P QE L+ + +  +     NL+V +F+ S EA   C+ LL+ + QI IN
Sbjct: 83  FHSHFTDYLLDPPQETLDALMQDSS---LDNLIVTFFDLSSEACDVCETLLQCLQQIKIN 142

Query: 146 HAVVNRVIKLTTR------SLMADKDNLSYNKRELLSSFSQHKNPFSTLIHN-RFLGLHK 205
           H  + RV+K+  R      +L    + L     + LS F+  KNP   +++  +F  +H 
Sbjct: 143 HNKIKRVMKIGKRVCNGAKTLECSPEMLCALIFQELSRFAALKNPLCRIVNEAQFRIVHD 202

Query: 206 THSELLRRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAP 265
            +S+LL +L++++   RRK+                               S++G  AAP
Sbjct: 203 ANSDLLTKLTSKKRRIRRKI-------------------------------SILGVFAAP 262

Query: 266 GLI-VCFTCSSKKKRA----HKLSSRELVLRKM----EVAARATYITMNDLDTLSRMAVR 325
            L+ +C  C  +KK+A    HK S+++  L K+    ++AA+  +I +NDLDTLSR+A R
Sbjct: 263 ALLGLCSFCLLRKKKAKGRMHK-SNKDTTLEKLGTQIDIAAKGMFILINDLDTLSRLAGR 322

Query: 326 LDGEVEHLRVVAEMWLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRS 358
           L  E+EH + VA M  + SR+ E+LKE ++EF   E+   +Q++EL++H+YLCF TINRS
Sbjct: 323 LCDEIEHRKTVAAMCAK-SRKIEVLKEALREFNGHEEKFSDQLQELEEHLYLCFHTINRS 356

[Close]

BLAST of Sed0003571 vs. TAIR 10
Match: AT3G49070.1 (Protein of unknown function (DUF677) )

HSP 1 Score: 120.6 bits (301), Expect = 2.8e-27
Identity = 117/392 (29.85%), Postives = 188/392 (47.96%), Query Frame = 0


Query: 1   MKTTSLWTSLRSSIFNPKERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSYIEFTT--- 60
           +K +S+ T+  SS  NPK+                 ++V EEY  AFRT+SY  F T   
Sbjct: 49  LKLSSIGTASGSS--NPKD--------------GADVDVREEYANAFRTESYNHFWTRVV 108

Query: 61  --TNKDNMSSSPTSS--------------------CLLEPDQELLNDMFRSCNGGR-GHN 120
             + K +  SS +SS                     LL+PD   +  +      GR    
Sbjct: 109 QLSRKKSAVSSSSSSPPIESSSTSARLMSYRLFAHNLLDPDLNTITRILDVSRVGRHTRT 168

Query: 121 LLVDYFETSFEAFKTCQLLLRAVDQICINHAVVNRVIKLTTRSLMADKDNLSYNKRELLS 180
           LL DYF  +  AF  C  LL+      I+H      ++    SL     + ++N   L+ 
Sbjct: 169 LLSDYFLETANAFLLCTQLLKN-----IHH------LRSKYESLKPKFHSENHNSLALID 228

Query: 181 SFSQHKNPFSTLIH--NRFLGLHKTHSELLRRLSNERNETRRKLRFQKIWKKAATSCFII 240
            F++    F   I   +R   +      LL+RL + R++TR KL+       ++    + 
Sbjct: 229 QFTEISKWFDPFISSGSRIQLIRSGCLYLLKRLESRRDKTRAKLKLINGLTHSSGLLVLA 288

Query: 241 SNVTVLITLLVLALHSLVGFAAAPGLIVCFTCSSKKKRAHKLSSRELVLRKMEVAARATY 300
              T+++T   +A H+   F AAP L+     +S+ K A   +       +++VAA+ TY
Sbjct: 289 LTTTLIVT---IASHAFALFLAAPTLL-----ASQFKPAGLRNKLTKTAARLDVAAKGTY 348

Query: 301 ITMNDLDTLSRMAVRLDGEVEHLRVVAEMWL-RSSRRREILKEVVKEFVAEEDAIVEQMK 360
           I   DLDT+SR+  R++ EV H+R +AE W+ R S R    +EV +E    E++  E++ 
Sbjct: 349 ILSRDLDTISRLVTRINDEVNHVRAMAEFWVGRGSGRVRGSEEVARELKRCEESFSEELD 405

Query: 361 ELQQHIYLCFLTINRSRRLVMNEIVGANEGSN 364
           EL++HIYLCF+TINR+R L++ EI+ +++  N
Sbjct: 409 ELEEHIYLCFMTINRARNLLVKEILDSDDPPN 405

[Close]

BLAST of Sed0003571 vs. TAIR 10
Match: AT3G19330.1 (Protein of unknown function (DUF677) )

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-12
Identity = 81/354 (22.88%), Postives = 151/354 (42.66%), Query Frame = 0


Query: 19  ERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSY--------IEFTTTNKDNMSSSPTSS 78
           E   +S ++   +  S   N++ E   AF+T SY        +    T   +    P   
Sbjct: 27  ESGVASTSRNDASISSPTFNLSRELAHAFQTPSYHDVRSRVHVVVDLTQIHHRLIQPDIE 86

Query: 79  CL----LEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAV 138
            L    L+P++E + +  R        NL+  YF+ S +A + C  L + V      H +
Sbjct: 87  LLLSQVLQPNKECVQEAIRHVKQTTLTNLVSTYFQHSEDATRLCLNLYQNVHS--ARHHL 146

Query: 139 VNRVIKLTT----RSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLHKTHSELL 198
              ++ L       SL A  ++L     ++       +NPFS+     F       S+L 
Sbjct: 147 YTPLLDLFNIFPGDSLPAIDESLCDLAFDVFLKLDTFENPFSSPESYSFRDTQLCFSQLK 206

Query: 199 RRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAPGLIVCF 258
             L     ++R ++R        ++ C + + V V  + +V+A H+L      P L+V  
Sbjct: 207 HNLDRRLRKSRSRVRLIHHATAGSSLCLVAAVVAVAASAVVIASHAL------PILLVVA 266

Query: 259 TCSSKKKRAHKLSSRELV-LRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEM 318
                    H    +EL  + ++  A++ T++   DLDT+ R+  RL   +E+ + +  +
Sbjct: 267 GPLCSPYLPHSFKRKELTNICQLNAASKGTFVLNKDLDTIDRLVSRLHTGIEYDKFLIRL 326

Query: 319 WLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEI 356
            L   R    ++E++K        +  Q+K+L+ HI L F  +N++R L++ EI
Sbjct: 327 GLERGRDVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARSLLLTEI 372

[Close]

BLAST of Sed0003571 vs. TAIR 10
Match: AT3G19330.3 (Protein of unknown function (DUF677) )

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-07
Identity = 76/354 (21.47%), Postives = 139/354 (39.27%), Query Frame = 0


Query: 19  ERSPSSKNKAITNALSGKLNVNEEYKQAFRTKSY--------IEFTTTNKDNMSSSPTSS 78
           E   +S ++   +  S   N++ E   AF+T SY        +    T   +    P   
Sbjct: 27  ESGVASTSRNDASISSPTFNLSRELAHAFQTPSYHDVRSRVHVVVDLTQIHHRLIQPDIE 86

Query: 79  CL----LEPDQELLNDMFRSCNGGRGHNLLVDYFETSFEAFKTCQLLLRAVDQICINHAV 138
            L    L+P++E + +  R        NL+  YF+ S +A + C  L + V      H +
Sbjct: 87  LLLSQVLQPNKECVQEAIRHVKQTTLTNLVSTYFQHSEDATRLCLNLYQNVHS--ARHHL 146

Query: 139 VNRVIKLTT----RSLMADKDNLSYNKRELLSSFSQHKNPFSTLIHNRFLGLHKTHSELL 198
              ++ L       SL A  ++L     ++       +NPFS+     F       S+L 
Sbjct: 147 YTPLLDLFNIFPGDSLPAIDESLCDLAFDVFLKLDTFENPFSSPESYSFRDTQLCFSQLK 206

Query: 199 RRLSNERNETRRKLRFQKIWKKAATSCFIISNVTVLITLLVLALHSLVGFAAAPGLIVCF 258
             L     ++R ++R                          L  H+  G   +P L    
Sbjct: 207 HNLDRRLRKSRSRVR--------------------------LIHHATAGPLCSPYL---- 266

Query: 259 TCSSKKKRAHKLSSRELV-LRKMEVAARATYITMNDLDTLSRMAVRLDGEVEHLRVVAEM 318
                    H    +EL  + ++  A++ T++   DLDT+ R+  RL   +E+ + +  +
Sbjct: 267 --------PHSFKRKELTNICQLNAASKGTFVLNKDLDTIDRLVSRLHTGIEYDKFLIRL 326

Query: 319 WLRSSRRREILKEVVKEFVAEEDAIVEQMKELQQHIYLCFLTINRSRRLVMNEI 356
            L   R    ++E++K        +  Q+K+L+ HI L F  +N++R L++ EI
Sbjct: 327 GLERGRDVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARSLLLTEI 340

The following BLAST results are available for this feature:

BLAST of Sed0003571 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884832.1	4.2e-110	65.07	UPF0496 protein At1g20180-like [Benincasa hispida]	[more]
XP_023002422.1	4.0e-105	65.71	UPF0496 protein At1g20180 isoform X1 [Cucurbita maxima]	[more]
KAG6585525.1	1.0e-100	61.10	UPF0496 protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023538283.1	1.3e-100	62.53	UPF0496 protein At1g20180 [Cucurbita pepo subsp. pepo]	[more]
XP_023002423.1	1.9e-99	65.96	UPF0496 protein At1g20180 isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0003571 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DYE5	2.4e-52	38.65	UPF0496 protein At1g20180 OS=Arabidopsis thaliana OX=3702 GN=At1g20180 PE=2 SV=2	[more]
Q9SMU4	3.9e-26	29.85	UPF0496 protein At3g49070 OS=Arabidopsis thaliana OX=3702 GN=At3g49070 PE=2 SV=1	[more]
A2YH25	2.6e-22	31.73	Putative UPF0496 protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_023618 ...	[more]
Q5Z8N6	2.6e-22	31.73	Putative UPF0496 protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0718...	[more]
A2XCJ1	1.1e-17	25.62	UPF0496 protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_009784 PE=3 SV=2	[more]

BLAST of Sed0003571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJG4	2.0e-105	65.71	UPF0496 protein At1g20180 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496268...	[more]
A0A6J1KTI4	9.4e-100	65.96	UPF0496 protein At1g20180 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496268...	[more]
A0A6J1GIK9	9.4e-100	61.37	UPF0496 protein At1g20180 OS=Cucurbita moschata OX=3662 GN=LOC111454488 PE=3 SV=...	[more]
A0A1S3BDA5	6.1e-99	60.21	UPF0496 protein At1g20180-like OS=Cucumis melo OX=3656 GN=LOC103488392 PE=3 SV=1	[more]
A0A0A0LN80	4.8e-96	59.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346030 PE=3 SV=1	[more]

BLAST of Sed0003571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20180.1	1.7e-53	38.65	Protein of unknown function (DUF677)	[more]
AT1G20180.2	2.3e-42	35.14	Protein of unknown function (DUF677)	[more]
AT3G49070.1	2.8e-27	29.85	Protein of unknown function (DUF677)	[more]
AT3G19330.1	9.5e-12	22.88	Protein of unknown function (DUF677)	[more]
AT3G19330.3	2.4e-07	21.47	Protein of unknown function (DUF677)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..195
None	No IPR available	PANTHER	PTHR31113:SF20	UPF0496 PROTEIN 2-RELATED	coord: 19..359
IPR007749	Protein of unknown function DUF677	PFAM	PF05055	DUF677	coord: 94..355 e-value: 5.6E-14 score: 51.8
IPR007749	Protein of unknown function DUF677	PANTHER	PTHR31113	UPF0496 PROTEIN 3-RELATED	coord: 19..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003571.1	Sed0003571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane