Sed0003556 (gene) Chayote v1

Overview
NameSed0003556
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG09: 28732375 .. 28735168 (-)
RNA-Seq ExpressionSed0003556
SyntenySed0003556
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTGATCCTTTCATAGAGACTGTTTTACCTCATCCTTTGCACAGTAGTTTTGACATGCCAGAATTGTGTTCACATGACCTCTGTTCAACTCAAAATGCTCCAATTGATCACATCCATGAGAGTTTAGCTCAAAATGCTCCAGTTAGTCACATTCTTGAGAATTCAGCTGAGGAAAGTCAAGATCACAATCAAGTGCTACATGATAATTTAGCCAATATCAATACAGATGTTATGGCTAAACCTAAAAATGTGGAAATTTCCATTGATGAGGCTTTACCTAATATCTCTCCCTTGTCGATTTATTCTAATTACATTTTGCCTAATGACGTCTCGCTGCCTATTGAAACTGAAGTTCTGCCTGCTGATAGTATAAAGCCTAATGAGGTTGGCTCTTCAAGAGTAGCTTCAGCTAATGTTTGCACACGTAAACCCACCAGATCACGGGTGCCCCATTCTTTTTTGAAGCACTATCACTGTGGGCTACTTATGGACTCTATAGTCTTCAAGAACAATAAGTGTTCCTTTCTCATTCTAATGAATATAGCAGTTGCCTATGCACCTTTTTTCTTTCATCAAGTTGTGAAGGATCAAAATTGGAAGGATGTTATGGATAAAAAATTGATGCAATGGAAAGAACCTAAGCTTGGAGTCTTGTTCCATTGCCGAAAGGATGCCATGTTGTGGGTTGTAAATGGGTCTACAAAGTCAAACATAAAGCTGATGGATAGATATAAGGCTAGGCTCGTTGCCAAGGGTTACAGTTATGTTGACTTCCTCGCTACATTTTCTCCAGTAACTAAAATAGTCTCAGTTAAGGTGCTTTTATCCCTTGCAGCCTCTTATAACTAGCCATTATCACAAATGAATGTTAATGATGCGTTTTTTAATGAAGAATTATTTGAAGAAGTTTATATGTCATTGCCTCAAGGATACTACAAGAATCAGCATGTTATAGCCCACGAACCCCTTGTTTGCAAGCTTCACAATTCCATATATGGTCTCAAACAAGTTTCAAGACAGTAGTTCTCTAAATTCTCCAGTGTCACGATGAATAACAAATTTTCCCAATCGAAAGTAGATTATTCCCTTTTCATAAAAGGAGAAGGAGAGACTTTTGTTGCATTGCTAGTATACATTGATGATATTTTGGTGACAAAGTCTACTCCATCTTGTGTTGAATAAGTTAAAAGACTGCTTAAGTCAAGCTTCATGCTAAAAGGCTTAGGGAATGCTCTGTACTTTTTTGGATTAGAGATCTCTTGGTCCACTACTGGCTTATACCTAACCCAATGAAAATATTGTCTTCAACAAATAGAAGAATAAGGTTTATTGGGAGCTAAGGTTGCAGCTCATCCAATGATGCCTAACCAGAAATTGTCTGCTGTTTCTAGTGAACCGCTTGATAATGGGAAGTCTACTGACTATAGAAGACTCGTTGGAAGGTTGCTTTATCTACAGATAAATAGACCTGACATATGCTTTGTAGTGCACAAATTTAGACAATTCGTATCTAAACCGTGTACCTCTCATTTTGATGTTGCAATGTATCTTCTTAGATACCTTAAAAGTAATGCAGGACAAGGTGTTGTTTTGCGAACTAACAAATCCTTTTAATTGAAGGCCTTTGTCGATTCAGATAGGGGGGTCATCCCTGGACACCAGACGGTCTGTCACCGATTTTTGCATTTTCTTAGGTAGCTCTCCCATATCTTGGAAGACTAAGAAGCAAGCTATTGCATCTAGATCATTTCTAAGGCAGAATATCGAGCATTGGTAGCTGTCATTAGTGAACTGGCTTGGCTTCACTTTCTTCTCAAAGACCTACAGATTATTGTCCCTCTTCCTTTCCTCGTTTACTGCGACAACCTTGCAGCCATAGCCATCACAACCAATCCCGACTTTCATGAACGAACGAAGCATATTGAAGTTGATTGCCACTTTGTAAAAGACAAGATTGATAAGGAACATTGAAACTACTTCCAGTTCGCTCAAATGGTCAGCTAGCCAACATGTTTACCAAACCATTGACCATCACCCACATTAAAAACTTCATGGTCAAGATTGGAATTCTCAATCTCCATGGGGGAGTATCACAATATATTTGCATATTAGTTTTTTTTTATTTTATTTTTATTATTTGTATTCTCTGCCCAATCAATTTCTTCTCCATAATTAGTTAGCTATTTTTATATTATGTTTGTTATTTCTGATCTCTACACAATTAGTAAGTTGTTAATGTTTTAGAGCTCATGTACATGAGACTTCTCCTATATAGACGAGAAGCTTTATTCAATAAAATACAATTGAGATTTTACTCGATGTTGAGCCCCAACACCTCACTTCTTTTACCTAAACACTAAAAAAGAAAAAGAAAAATTGTATCGTGAATTTGTCTAAGAAAAAGAAGAAAAAAAAACTGGATGGATCCCACTAAAAATGTTATTTATAAAATAAGAAAAACAAAAAAACATGGAGCAGCCATTTTTGAAAATGCAAAAAGCGTTTCATCCTCCATTTACGGAACAAACAGAAACAGAGACAGAGACAGAGACAGAGACCCATTTAGTTTACTCAATGGCTCATCCTCTCTCTCTTCCAGTCCTCCACCATTGGCTCTCCATCATCCGCTCCCCGTCCTTCCTCCGTCGCCGCCGCCATCCCCCGTGGTTCTTCCACTCCCTCTCTGGGAGCTCTGTTCCACGTCCTCGAAATCTTCTCCTTCGCCCTCTTCTCCTTCGATTTGCGAGATGGGGCGGAAGAAGAGGATGAACAGTGTTCTTCAATCTAA

mRNA sequence

ATGGTTGTTGATCCTTTCATAGAGACTGTTTTACCTCATCCTTTGCACAGTAGTTTTGACATGCCAGAATTGTGTTCACATGACCTCTGTTCAACTCAAAATGCTCCAATTGATCACATCCATGAGAGTTTAGCTCAAAATGCTCCAGTTAGTCACATTCTTGAGAATTCAGCTGAGGAAAGTCAAGATCACAATCAAGTGCTACATGATAATTTAGCCAATATCAATACAGATGTTATGGCTAAACCTAAAAATGTGGAAATTTCCATTGATGAGGCTTTACCTAATATCTCTCCCTTGTCGATTTATTCTAATTACATTTTGCCTAATGACGTCTCGCTGCCTATTGAAACTGAAGTTCTGCCTGCTGATAGTATAAAGCCTAATGAGGTTGGCTCTTCAAGAGTAGCTTCAGCTAATTCCTCCACCATTGGCTCTCCATCATCCGCTCCCCGTCCTTCCTCCGTCGCCGCCGCCATCCCCCGTGGTTCTTCCACTCCCTCTCTGGGAGCTCTGTTCCACGTCCTCGAAATCTTCTCCTTCGCCCTCTTCTCCTTCGATTTGCGAGATGGGGCGGAAGAAGAGGATGAACAGTGTTCTTCAATCTAA

Coding sequence (CDS)

ATGGTTGTTGATCCTTTCATAGAGACTGTTTTACCTCATCCTTTGCACAGTAGTTTTGACATGCCAGAATTGTGTTCACATGACCTCTGTTCAACTCAAAATGCTCCAATTGATCACATCCATGAGAGTTTAGCTCAAAATGCTCCAGTTAGTCACATTCTTGAGAATTCAGCTGAGGAAAGTCAAGATCACAATCAAGTGCTACATGATAATTTAGCCAATATCAATACAGATGTTATGGCTAAACCTAAAAATGTGGAAATTTCCATTGATGAGGCTTTACCTAATATCTCTCCCTTGTCGATTTATTCTAATTACATTTTGCCTAATGACGTCTCGCTGCCTATTGAAACTGAAGTTCTGCCTGCTGATAGTATAAAGCCTAATGAGGTTGGCTCTTCAAGAGTAGCTTCAGCTAATTCCTCCACCATTGGCTCTCCATCATCCGCTCCCCGTCCTTCCTCCGTCGCCGCCGCCATCCCCCGTGGTTCTTCCACTCCCTCTCTGGGAGCTCTGTTCCACGTCCTCGAAATCTTCTCCTTCGCCCTCTTCTCCTTCGATTTGCGAGATGGGGCGGAAGAAGAGGATGAACAGTGTTCTTCAATCTAA

Protein sequence

MVVDPFIETVLPHPLHSSFDMPELCSHDLCSTQNAPIDHIHESLAQNAPVSHILENSAEESQDHNQVLHDNLANINTDVMAKPKNVEISIDEALPNISPLSIYSNYILPNDVSLPIETEVLPADSIKPNEVGSSRVASANSSTIGSPSSAPRPSSVAAAIPRGSSTPSLGALFHVLEIFSFALFSFDLRDGAEEEDEQCSSI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0003556.1Sed0003556.1mRNA