Sed0003528 (gene) Chayote v1

Overview


Name	Sed0003528
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein 3-like
Location	LG05: 27442811 .. 27443792 (+)
RNA-Seq Expression	Sed0003528
Synteny	Sed0003528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAACTGTAAAACAGTGCCATTTCTGTTCTATACATAGAACCAACAAACCCCTCTCTACACTTATTACCATTTTCAATAACCCTTTCTCTCTCTTCTTCTTCTTCTTCCATTATCAATGGAGCTTCTTCCCCTATCAATCTCTGTTTCAGAGTCTTCTCCAAAACTACAAATTCCCCAACTGGGTTTCGATCTCAGCCTCTGCAACAACGATTCCGATCATGGGTCGAACCCGGAACTCAATCTAATCCACTCTTTCGATCCCAATTCGGTGGCGGACCCAACCGAGTCAGAAACAGAGCTCAGGGTTTTCTCTTGCAACTATTGCCATAGAAAGTTTTACAGTTCTCAGGCTCTTGGGGGTCACCAAAATGCCCACAAGCGCGAGAGGACGTTGGCCAAGATGTATCACCGGGTCGGGTCGGGGTTCGATTTCGGGCTCGCTCATCGCTTTTCGAGTTTCGGTTCGCTTCCTCTTCACAGGTCGCTTGGAATTCAGGCTCATTCGGTTGTTCATAAGCCTTCTTTTTTGGGGATTTGTGGTCACGGTGGCTGGTCGCGGCGCCCGGCGGTTGCCCGGCTGATGCAGGGGAGTTCCGACGTCGGAAGTTTCAGAGGTGTTTCGTCCAACAGTGGAGCTGCAAGGTTTGAGGGACTCGGAAAATTCTCTGCCGCGTCGGCACTGCTCGGTGGGTTTTGGTGGGACGGCGGAAGTGGCGGCGGCGGCGGCGGGTTTAGTGAATTGAAGAGGAAGCCTAAGCAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAACTAGAAAGGGAACTTTTTTTCCTTTTTGAAATTTGATGCTTTGTTCTAAGATGGGAATTGATTTAGATCCTTCTTTTTTGTTTCCAATACTTGACAAGATTGTCTCTGTAAATAATCCATTTTGGCAATAGAAGAACAGAAATGTAAACCTCTTGAAAGGGTAATCTTTGGAATTCGACA

mRNA sequence

CTCCAACTGTAAAACAGTGCCATTTCTGTTCTATACATAGAACCAACAAACCCCTCTCTACACTTATTACCATTTTCAATAACCCTTTCTCTCTCTTCTTCTTCTTCTTCCATTATCAATGGAGCTTCTTCCCCTATCAATCTCTGTTTCAGAGTCTTCTCCAAAACTACAAATTCCCCAACTGGGTTTCGATCTCAGCCTCTGCAACAACGATTCCGATCATGGGTCGAACCCGGAACTCAATCTAATCCACTCTTTCGATCCCAATTCGGTGGCGGACCCAACCGAGTCAGAAACAGAGCTCAGGGTTTTCTCTTGCAACTATTGCCATAGAAAGTTTTACAGTTCTCAGGCTCTTGGGGGTCACCAAAATGCCCACAAGCGCGAGAGGACGTTGGCCAAGATGTATCACCGGGTCGGGTCGGGGTTCGATTTCGGGCTCGCTCATCGCTTTTCGAGTTTCGGTTCGCTTCCTCTTCACAGGTCGCTTGGAATTCAGGCTCATTCGGTTGTTCATAAGCCTTCTTTTTTGGGGATTTGTGGTCACGGTGGCTGGTCGCGGCGCCCGGCGGTTGCCCGGCTGATGCAGGGGAGTTCCGACGTCGGAAGTTTCAGAGGTGTTTCGTCCAACAGTGGAGCTGCAAGGTTTGAGGGACTCGGAAAATTCTCTGCCGCGTCGGCACTGCTCGGTGGGTTTTGGTGGGACGGCGGAAGTGGCGGCGGCGGCGGCGGGTTTAGTGAATTGAAGAGGAAGCCTAAGCAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAACTAGAAAGGGAACTTTTTTTCCTTTTTGAAATTTGATGCTTTGTTCTAAGATGGGAATTGATTTAGATCCTTCTTTTTTGTTTCCAATACTTGACAAGATTGTCTCTGTAAATAATCCATTTTGGCAATAGAAGAACAGAAATGTAAACCTCTTGAAAGGGTAATCTTTGGAATTCGACA

Coding sequence (CDS)

ATGGAGCTTCTTCCCCTATCAATCTCTGTTTCAGAGTCTTCTCCAAAACTACAAATTCCCCAACTGGGTTTCGATCTCAGCCTCTGCAACAACGATTCCGATCATGGGTCGAACCCGGAACTCAATCTAATCCACTCTTTCGATCCCAATTCGGTGGCGGACCCAACCGAGTCAGAAACAGAGCTCAGGGTTTTCTCTTGCAACTATTGCCATAGAAAGTTTTACAGTTCTCAGGCTCTTGGGGGTCACCAAAATGCCCACAAGCGCGAGAGGACGTTGGCCAAGATGTATCACCGGGTCGGGTCGGGGTTCGATTTCGGGCTCGCTCATCGCTTTTCGAGTTTCGGTTCGCTTCCTCTTCACAGGTCGCTTGGAATTCAGGCTCATTCGGTTGTTCATAAGCCTTCTTTTTTGGGGATTTGTGGTCACGGTGGCTGGTCGCGGCGCCCGGCGGTTGCCCGGCTGATGCAGGGGAGTTCCGACGTCGGAAGTTTCAGAGGTGTTTCGTCCAACAGTGGAGCTGCAAGGTTTGAGGGACTCGGAAAATTCTCTGCCGCGTCGGCACTGCTCGGTGGGTTTTGGTGGGACGGCGGAAGTGGCGGCGGCGGCGGCGGGTTTAGTGAATTGAAGAGGAAGCCTAAGCAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAA

Protein sequence

MELLPLSISVSESSPKLQIPQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPTESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFGSLPLHRSLGIQAHSVVHKPSFLGICGHGGWSRRPAVARLMQGSSDVGSFRGVSSNSGAARFEGLGKFSAASALLGGFWWDGGSGGGGGGFSELKRKPKQDELLKLDLSLKL

Homology

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BLAST of Sed0003528 vs. NCBI nr
Match: XP_008454489.1 (PREDICTED: zinc finger protein 3-like [Cucumis melo] >TYK29612.1 zinc finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 2.8e-77
Identity = 170/254 (66.93%), Postives = 185/254 (72.83%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     +G DLSL NNDSDHGSNPELNLI  FD N   +PT
Sbjct: 17  ISASESSPPCPRGDRTTDQINPNSHMGLDLSLSNNDSDHGSNPELNLIDCFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           ++ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   RVGSG +FGLAHR+SS  
Sbjct: 77  DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH GWSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFS-----AASALLGGFWWD--GGSGGGGGGFSELKRKP 228
            VGS RG+SSN+GAARFEG+ +FS      AS  LGGFWWD  GG GGGGGGFS +K KP
Sbjct: 197 HVGSLRGISSNTGAARFEGVKRFSPVAVTEASPSLGGFWWDGGGGGGGGGGGFSHMKMKP 256

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BLAST of Sed0003528 vs. NCBI nr
Match: KAA0044485.1 (zinc finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 297.0 bits (759), Expect = 1.4e-76
Identity = 169/254 (66.54%), Postives = 184/254 (72.44%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     +G DLSL NND DHGSNPELNLI  FD N   +PT
Sbjct: 17  ISASESSPPCPRGDRTTDQINPNSHMGLDLSLSNNDFDHGSNPELNLIDCFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           ++ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   RVGSG +FGLAHR+SS  
Sbjct: 77  DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH GWSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFS-----AASALLGGFWWD--GGSGGGGGGFSELKRKP 228
            VGS RG+SSN+GAARFEG+ +FS      AS  LGGFWWD  GG GGGGGGFS +K KP
Sbjct: 197 HVGSLRGISSNTGAARFEGVKRFSPVAVTEASPSLGGFWWDGGGGGGGGGGGFSHMKMKP 256

[Close]

BLAST of Sed0003528 vs. NCBI nr
Match: XP_022955435.1 (zinc finger protein 3-like [Cucurbita moschata])

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-76
Identity = 167/252 (66.27%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     LG DL+L NNDSDHGSNPELNLIHSFD N   +PT
Sbjct: 17  ISASESSPSCPRGDPTTDQINLNSHLGLDLTLSNNDSDHGSNPELNLIHSFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           + ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   R+G+G +FGL HR+SS  
Sbjct: 77  DGETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRIGTGSNFGLPHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH  WSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSLSRSLGIQAHSMVHKPSLHVSAIGSAGIYGHSEWSRKPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFSAASAL-----LGGFWWDGGSGGGGGGFSELKRKPKQ 228
            VGSFRG+SS++GAARFEG+GK S A+A       GGFWW  GSGGGGGGF+ LK KPKQ
Sbjct: 197 HVGSFRGISSDTGAARFEGVGKLSPAAATEAPPPHGGFWW--GSGGGGGGFNHLKMKPKQ 256

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BLAST of Sed0003528 vs. NCBI nr
Match: XP_023528024.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.0 bits (754), Expect = 5.4e-76
Identity = 166/252 (65.87%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     LG DL+L NNDSDHGSNPELNLIHSFD N   +PT
Sbjct: 17  ISASESSPSCPKGDPTTDQINLNSHLGLDLTLSNNDSDHGSNPELNLIHSFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           + ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   R+G+G +FGL HR+SS  
Sbjct: 77  DGETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRIGTGSNFGLPHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH  WSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSLSRSLGIQAHSMVHKPSLHVSAIGSAGIYGHSEWSRKPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFSAASAL-----LGGFWWDGGSGGGGGGFSELKRKPKQ 228
            VGSFRG+SS++GAARFEG+GK S A+        GGFWW  GSGGGGGGF+ LK KPKQ
Sbjct: 197 HVGSFRGISSDTGAARFEGVGKLSPAAVTEAPPPHGGFWW--GSGGGGGGFNHLKMKPKQ 256

[Close]

BLAST of Sed0003528 vs. NCBI nr
Match: XP_022980821.1 (zinc finger protein 3-like [Cucurbita maxima])

HSP 1 Score: 293.5 bits (750), Expect = 1.6e-75
Identity = 165/252 (65.48%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     LG DL+L NN+SDHGSNPELNLIHSFD N   +PT
Sbjct: 17  ISASESSPSCPKGDPTTDQINLNSHLGLDLTLSNNESDHGSNPELNLIHSFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           + +TE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   R+G+G +FGL HR+SS  
Sbjct: 77  DGQTEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRIGTGSNFGLPHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH  WSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSLSRSLGIQAHSMVHKPSLHVSAIGSAGIYGHSEWSRKPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFSAASAL-----LGGFWWDGGSGGGGGGFSELKRKPKQ 228
            VGSFRG+SS++GAARFEG+GK S A+        GGFWW  GSGGGGGGFS LK KPKQ
Sbjct: 197 HVGSFRGISSDTGAARFEGVGKLSPAAVTEAPPPHGGFWW--GSGGGGGGFSHLKMKPKQ 256

[Close]

BLAST of Sed0003528 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-24
Identity = 68/125 (54.40%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 35  HGSNPELNLIHSF-DPNSVADPTESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTL 94
           H S+ ELNLI    D  S+ + + + TE ++FSCNYC R FYSSQALGGHQNAHKRERTL
Sbjct: 30  HNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTL 89

Query: 95  AKMYHRV-GSGFDFGLAHRFSSF---GSLPLHRSLGIQAHSVVHK-PSFLGICGHGG--- 151
           AK   R+  S   FG  + FS     G    HRSLGIQAHS+ HK  S+ G  GH G   
Sbjct: 90  AKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN 149

[Close]

BLAST of Sed0003528 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-24
Identity = 84/208 (40.38%), Postives = 109/208 (52.40%), Query Frame = 0


Query: 9   SVSESSPKLQIPQLG---FDLSLCNNDSDHGSNPELNLIHSFDPNSVA-----DPTESET 68
           S+      L+I + G    +L L        ++ ELNLI SF  +S +        E   
Sbjct: 4   SIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLA 63

Query: 69  ELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAK--MYHRV------GSGFDF--GLAH 128
           + RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   Y+++       S F F  G   
Sbjct: 64  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVS 123

Query: 129 RFSSFGSLPLHRS------LGIQAHSVVHKPSFLG----ICGH---GGWSRRPAVARLMQ 186
           RF+S  SLPLH S      LGIQAHS +HKPSFLG       H       ++P + +++ 
Sbjct: 124 RFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQSIHQKPTIGKMLP 183

[Close]

BLAST of Sed0003528 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 57/140 (40.71%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 22  LGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPTESETE------LRVFSCNYCHRKFY 81
           L   LS  NN++++      +L       S +   E + +       RVFSCNYC RKFY
Sbjct: 36  LNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFY 95

Query: 82  SSQALGGHQNAHKRERTLAKMYHRV---------GSGFDFGLAHRFSSFGSLPLH----- 137
           SSQALGGHQNAHKRERTLAK   R+         GS  ++  A   ++   LPLH     
Sbjct: 96  SSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNG 155

[Close]

BLAST of Sed0003528 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 7   SISVSESSPKLQIPQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPTESETELRVFS 66
           S   S  +P  +  +   +  L   +S+H S  +L L  +F  N     T+ E   RVFS
Sbjct: 4   SDDASRETPASRGGEASSNQDLSKPESNHVS-LDLKLNDTF--NDDTKSTKCEANPRVFS 63

Query: 67  CNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFGSLPLHRSLGI 126
           CNYC RKFYSSQALGGHQNAHKRERT+AK    +G    FG  HR  ++ S     SLG+
Sbjct: 64  CNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR--MFGHHHRPYTYTS----SSLGM 118

Query: 127 QAHS 131
           QAHS
Sbjct: 124 QAHS 118

[Close]

BLAST of Sed0003528 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.8e-13
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 38 NPELNLIHSFDPNSVADPTESET-------ELRVFSCNYCHRKFYSSQALGGHQNAHKRE 96
          N +LNL    +P+S++  + S T       + RVFSCNYC RKFYSSQALGGHQNAHK E
Sbjct: 18 NHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLE 77

[Close]

BLAST of Sed0003528 vs. ExPASy TrEMBL
Match: A0A5D3E105 (Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002230 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 170/254 (66.93%), Postives = 185/254 (72.83%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     +G DLSL NNDSDHGSNPELNLI  FD N   +PT
Sbjct: 17  ISASESSPPCPRGDRTTDQINPNSHMGLDLSLSNNDSDHGSNPELNLIDCFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           ++ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   RVGSG +FGLAHR+SS  
Sbjct: 77  DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH GWSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFS-----AASALLGGFWWD--GGSGGGGGGFSELKRKP 228
            VGS RG+SSN+GAARFEG+ +FS      AS  LGGFWWD  GG GGGGGGFS +K KP
Sbjct: 197 HVGSLRGISSNTGAARFEGVKRFSPVAVTEASPSLGGFWWDGGGGGGGGGGGFSHMKMKP 256

[Close]

BLAST of Sed0003528 vs. ExPASy TrEMBL
Match: A0A1S3BZI2 (zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103494887 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 170/254 (66.93%), Postives = 185/254 (72.83%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     +G DLSL NNDSDHGSNPELNLI  FD N   +PT
Sbjct: 17  ISASESSPPCPRGDRTTDQINPNSHMGLDLSLSNNDSDHGSNPELNLIDCFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           ++ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   RVGSG +FGLAHR+SS  
Sbjct: 77  DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH GWSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFS-----AASALLGGFWWD--GGSGGGGGGFSELKRKP 228
            VGS RG+SSN+GAARFEG+ +FS      AS  LGGFWWD  GG GGGGGGFS +K KP
Sbjct: 197 HVGSLRGISSNTGAARFEGVKRFSPVAVTEASPSLGGFWWDGGGGGGGGGGGFSHMKMKP 256

[Close]

BLAST of Sed0003528 vs. ExPASy TrEMBL
Match: A0A5A7TSZ3 (Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002220 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.8e-77
Identity = 169/254 (66.54%), Postives = 184/254 (72.44%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     +G DLSL NND DHGSNPELNLI  FD N   +PT
Sbjct: 17  ISASESSPPCPRGDRTTDQINPNSHMGLDLSLSNNDFDHGSNPELNLIDCFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           ++ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   RVGSG +FGLAHR+SS  
Sbjct: 77  DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH GWSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFS-----AASALLGGFWWD--GGSGGGGGGFSELKRKP 228
            VGS RG+SSN+GAARFEG+ +FS      AS  LGGFWWD  GG GGGGGGFS +K KP
Sbjct: 197 HVGSLRGISSNTGAARFEGVKRFSPVAVTEASPSLGGFWWDGGGGGGGGGGGFSHMKMKP 256

[Close]

BLAST of Sed0003528 vs. ExPASy TrEMBL
Match: A0A6J1GV47 (zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111457462 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 8.9e-77
Identity = 167/252 (66.27%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     LG DL+L NNDSDHGSNPELNLIHSFD N   +PT
Sbjct: 17  ISASESSPSCPRGDPTTDQINLNSHLGLDLTLSNNDSDHGSNPELNLIHSFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           + ETE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   R+G+G +FGL HR+SS  
Sbjct: 77  DGETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRIGTGSNFGLPHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH  WSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSLSRSLGIQAHSMVHKPSLHVSAIGSAGIYGHSEWSRKPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFSAASAL-----LGGFWWDGGSGGGGGGFSELKRKPKQ 228
            VGSFRG+SS++GAARFEG+GK S A+A       GGFWW  GSGGGGGGF+ LK KPKQ
Sbjct: 197 HVGSFRGISSDTGAARFEGVGKLSPAAATEAPPPHGGFWW--GSGGGGGGFNHLKMKPKQ 256

[Close]

BLAST of Sed0003528 vs. ExPASy TrEMBL
Match: A0A6J1IUN4 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480095 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 7.6e-76
Identity = 165/252 (65.48%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 8   ISVSESSPKL--------QI---PQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPT 67
           IS SESSP          QI     LG DL+L NN+SDHGSNPELNLIHSFD N   +PT
Sbjct: 17  ISASESSPSCPKGDPTTDQINLNSHLGLDLTLSNNESDHGSNPELNLIHSFDANLATEPT 76

Query: 68  ESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFG 127
           + +TE RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   R+G+G +FGL HR+SS  
Sbjct: 77  DGQTEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRIGTGSNFGLPHRYSSLA 136

Query: 128 SLPLH----RSLGIQAHSVVHKPSF-------LGICGHGGWSRR-----PAVARLMQGSS 187
           SLPLH    RSLGIQAHS+VHKPS         GI GH  WSR+     PA+ RLMQG+S
Sbjct: 137 SLPLHGSLSRSLGIQAHSMVHKPSLHVSAIGSAGIYGHSEWSRKPLDQHPAIGRLMQGNS 196

Query: 188 DVGSFRGVSSNSGAARFEGLGKFSAASAL-----LGGFWWDGGSGGGGGGFSELKRKPKQ 228
            VGSFRG+SS++GAARFEG+GK S A+        GGFWW  GSGGGGGGFS LK KPKQ
Sbjct: 197 HVGSFRGISSDTGAARFEGVGKLSPAAVTEAPPPHGGFWW--GSGGGGGGFSHLKMKPKQ 256

[Close]

BLAST of Sed0003528 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-25
Identity = 68/125 (54.40%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 35  HGSNPELNLIHSF-DPNSVADPTESETELRVFSCNYCHRKFYSSQALGGHQNAHKRERTL 94
           H S+ ELNLI    D  S+ + + + TE ++FSCNYC R FYSSQALGGHQNAHKRERTL
Sbjct: 30  HNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTL 89

Query: 95  AKMYHRV-GSGFDFGLAHRFSSF---GSLPLHRSLGIQAHSVVHK-PSFLGICGHGG--- 151
           AK   R+  S   FG  + FS     G    HRSLGIQAHS+ HK  S+ G  GH G   
Sbjct: 90  AKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN 149

[Close]

BLAST of Sed0003528 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25
Identity = 84/208 (40.38%), Postives = 109/208 (52.40%), Query Frame = 0


Query: 9   SVSESSPKLQIPQLG---FDLSLCNNDSDHGSNPELNLIHSFDPNSVA-----DPTESET 68
           S+      L+I + G    +L L        ++ ELNLI SF  +S +        E   
Sbjct: 4   SIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLA 63

Query: 69  ELRVFSCNYCHRKFYSSQALGGHQNAHKRERTLAK--MYHRV------GSGFDF--GLAH 128
           + RVFSCNYC RKFYSSQALGGHQNAHKRERTLAK   Y+++       S F F  G   
Sbjct: 64  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVS 123

Query: 129 RFSSFGSLPLHRS------LGIQAHSVVHKPSFLG----ICGH---GGWSRRPAVARLMQ 186
           RF+S  SLPLH S      LGIQAHS +HKPSFLG       H       ++P + +++ 
Sbjct: 124 RFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQSIHQKPTIGKMLP 183

[Close]

BLAST of Sed0003528 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-24
Identity = 86/225 (38.22%), Postives = 114/225 (50.67%), Query Frame = 0


Query: 25  DLSLCNNDSDHGS-NPELNLIHSFDPNSVADPT---ESETELRVFSCNYCHRKFYSSQAL 84
           DL L   DS     N ELNL+   +   V  P+    + TE ++FSCNYC R FYSSQAL
Sbjct: 61  DLMLAGYDSSQPQLNQELNLLDCLE-TGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQAL 120

Query: 85  GGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFGSLPLH-----RSLGIQAHSVVHKP 144
           GGHQNAHKRERTLAK   R+ S   FG  H +  F  +P H     R+LGIQAHS+ HKP
Sbjct: 121 GGHQNAHKRERTLAKRGQRMASAAAFG--HPY-GFAPVPFHGQYSNRTLGIQAHSMSHKP 180

Query: 145 S----FLGICGHGGWSR-----RPAVARLMQGSSDVGSFRGVSSNSGAARFEGLGKFSAA 204
           S    + G  G   WSR     +PA+A+L    +     + + +    +  E +G+F   
Sbjct: 181 SSYNVYGGEYGQINWSRIPLVQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGRFDVG 240

Query: 205 SALL----GGFWWDGGSGGGGGGFSELKRKPKQDELLKLDLSLKL 228
              +       W  G          EL +  ++++   LDLSLKL
Sbjct: 241 RIPVEFPTSELWQRG---------EELLKPAEEEKQKNLDLSLKL 272

[Close]

BLAST of Sed0003528 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-17
Identity = 57/140 (40.71%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 22  LGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPTESETE------LRVFSCNYCHRKFY 81
           L   LS  NN++++      +L       S +   E + +       RVFSCNYC RKFY
Sbjct: 36  LNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFY 95

Query: 82  SSQALGGHQNAHKRERTLAKMYHRV---------GSGFDFGLAHRFSSFGSLPLH----- 137
           SSQALGGHQNAHKRERTLAK   R+         GS  ++  A   ++   LPLH     
Sbjct: 96  SSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNG 155

[Close]

BLAST of Sed0003528 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 7   SISVSESSPKLQIPQLGFDLSLCNNDSDHGSNPELNLIHSFDPNSVADPTESETELRVFS 66
           S   S  +P  +  +   +  L   +S+H S  +L L  +F  N     T+ E   RVFS
Sbjct: 4   SDDASRETPASRGGEASSNQDLSKPESNHVS-LDLKLNDTF--NDDTKSTKCEANPRVFS 63

Query: 67  CNYCHRKFYSSQALGGHQNAHKRERTLAKMYHRVGSGFDFGLAHRFSSFGSLPLHRSLGI 126
           CNYC RKFYSSQALGGHQNAHKRERT+AK    +G    FG  HR  ++ S     SLG+
Sbjct: 64  CNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR--MFGHHHRPYTYTS----SSLGM 118

Query: 127 QAHS 131
           QAHS
Sbjct: 124 QAHS 118

The following BLAST results are available for this feature:

BLAST of Sed0003528 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454489.1	2.8e-77	66.93	PREDICTED: zinc finger protein 3-like [Cucumis melo] >TYK29612.1 zinc finger pro...	[more]
KAA0044485.1	1.4e-76	66.54	zinc finger protein 3-like [Cucumis melo var. makuwa]	[more]
XP_022955435.1	1.8e-76	66.27	zinc finger protein 3-like [Cucurbita moschata]	[more]
XP_023528024.1	5.4e-76	65.87	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022980821.1	1.6e-75	65.48	zinc finger protein 3-like [Cucurbita maxima]	[more]

BLAST of Sed0003528 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	2.9e-24	54.40	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q42485	3.8e-24	40.38	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39263	3.8e-16	40.71	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	1.9e-15	45.97	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	8.8e-13	60.00	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Sed0003528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E105	1.4e-77	66.93	Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BZI2	1.4e-77	66.93	zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103494887 PE=4 SV=1	[more]
A0A5A7TSZ3	6.8e-77	66.54	Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A6J1GV47	8.9e-77	66.27	zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111457462 PE=4 SV...	[more]
A0A6J1IUN4	7.6e-76	65.48	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480095 PE=4 SV=1	[more]

BLAST of Sed0003528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25160.1	2.1e-25	54.40	zinc finger protein 3	[more]
AT1G80730.1	2.7e-25	40.38	zinc-finger protein 1	[more]
AT5G10970.1	3.9e-24	38.22	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G66140.1	2.7e-17	40.71	zinc finger protein 4	[more]
AT1G24625.1	1.3e-16	45.97	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 45..101 e-value: 1.7E-6 score: 29.8
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 22..227
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 22..227
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 67..87
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 65..92 score: 11.406082
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 63..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003528.1	Sed0003528.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway