Sed0003513 (gene) Chayote v1

Overview


Name	Sed0003513
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dof zinc finger protein 2-like
Location	LG14: 15312497 .. 15313793 (+)
RNA-Seq Expression	Sed0003513
Synteny	Sed0003513

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCATTGTTCTCAAAATCCCTCATTTCCTCTTTCTTTCTTTTTCTCTCTCTCTCATATCACCAAATCAGAACACATTGATTCAACAAAACAAACTTTCTTTATCTCTTTTCCACTAACTAAAAAGACTCAAACTTCAATATATCATTTGCTTTGCTTTTCTTTTCTTTAGATTTTGGATTGTTGTGAAATCCAAAGAAAACCCCAAAAACAAAAAGGAAAAAAAATGATCCAAGAACTATTTGGTGTTTCAGGGCTTTTAGCTGCAGCTGGAGACGCTAAAATCTCCATCAATGGTTCAATTCTAAATTCTTCTTCTCTTTCTGCAGCCTCGTCCGCCGCTATAACCACCACCTCCTCTGTGGCTACCGTTTCTGTGGCTGCCGCCAAGACAACAACCGCATCAAATTCCGAAGGCCAAAACTTGCGTTGCCCCAGATGCGATTCTTCAAACACTAAATTCTGTTACTATAACAACTACAACCTCACTCAACCTCGCCACTTTTGCAAAACATGTCGCCGTTATTGGACCAAAGGTGGGGTCCTCAGAAATGTCCCCATCGGAGGTGGGTGTCGGAAGAACAAGAGCGCGGCGGCTGGGAGGGTGAAAACGGCGTCGTCGGAGAAATTGGGTCGGGTTGGGCTAGATGACGATATAGTATCCTCGCCCTCGCAAATTCTGTGGGGCTCGCCGCAGAATTCTCATCTCTTGGCCATTGTGAGATCTGCCGCCCAAAATCAAAACCCTAGCCCTAATAATCACGCTCGGACGATGGGGTTTGACCCGGTCAACTGCAGCTCTTACTGGAGGAACAATCCGAGCCAAGTTATCCACCAACAAAATCAAAATGGGTATGTCCATGGTGGCGGCTGCAGCAGTGGGATTCAGGAGCTGTATCAGAAACTTAAGACTGCTTCTAGCAGTTATTTCACCGACGGTCTACAGGGATCGAGGGCGGTGGGGGGTGTGGGTACGGCGGCAATGGCAACGGCTCCGGTGGGAGGCGGCGAAACTACAGGTTATTGGAACCCAGCTTTTTCTTGGTCTGATGTTCATGCTAGTGCTAATGAAGCATATCCTTAGAAAAAAGAGACGATTTTGTTTCTCTAATTTGGTCATTTCTCTTTTCCATATTAGGATTTGTTTTTGCCTGTGTTTTTTTTTTTTTTGGTTTTTTTGCTTGGGTTTGGAGTGTATGGAATGAATGGCATATTTAGCATCCGTGTATTTTTGGAATTAGTAACAGTTTATGTTTAAATTACATTAACTTTATGAAAATGTATCAAGGACTCGGAC

mRNA sequence

CTCCCATTGTTCTCAAAATCCCTCATTTCCTCTTTCTTTCTTTTTCTCTCTCTCTCATATCACCAAATCAGAACACATTGATTCAACAAAACAAACTTTCTTTATCTCTTTTCCACTAACTAAAAAGACTCAAACTTCAATATATCATTTGCTTTGCTTTTCTTTTCTTTAGATTTTGGATTGTTGTGAAATCCAAAGAAAACCCCAAAAACAAAAAGGAAAAAAAATGATCCAAGAACTATTTGGTGTTTCAGGGCTTTTAGCTGCAGCTGGAGACGCTAAAATCTCCATCAATGGTTCAATTCTAAATTCTTCTTCTCTTTCTGCAGCCTCGTCCGCCGCTATAACCACCACCTCCTCTGTGGCTACCGTTTCTGTGGCTGCCGCCAAGACAACAACCGCATCAAATTCCGAAGGCCAAAACTTGCGTTGCCCCAGATGCGATTCTTCAAACACTAAATTCTGTTACTATAACAACTACAACCTCACTCAACCTCGCCACTTTTGCAAAACATGTCGCCGTTATTGGACCAAAGGTGGGGTCCTCAGAAATGTCCCCATCGGAGGTGGGTGTCGGAAGAACAAGAGCGCGGCGGCTGGGAGGGTGAAAACGGCGTCGTCGGAGAAATTGGGTCGGGTTGGGCTAGATGACGATATAGTATCCTCGCCCTCGCAAATTCTGTGGGGCTCGCCGCAGAATTCTCATCTCTTGGCCATTGTGAGATCTGCCGCCCAAAATCAAAACCCTAGCCCTAATAATCACGCTCGGACGATGGGGTTTGACCCGGTCAACTGCAGCTCTTACTGGAGGAACAATCCGAGCCAAGTTATCCACCAACAAAATCAAAATGGGTATGTCCATGGTGGCGGCTGCAGCAGTGGGATTCAGGAGCTGTATCAGAAACTTAAGACTGCTTCTAGCAGTTATTTCACCGACGGTCTACAGGGATCGAGGGCGGTGGGGGGTGTGGGTACGGCGGCAATGGCAACGGCTCCGGTGGGAGGCGGCGAAACTACAGGTTATTGGAACCCAGCTTTTTCTTGGTCTGATGTTCATGCTAGTGCTAATGAAGCATATCCTTAGAAAAAAGAGACGATTTTGTTTCTCTAATTTGGTCATTTCTCTTTTCCATATTAGGATTTGTTTTTGCCTGTGTTTTTTTTTTTTTTGGTTTTTTTGCTTGGGTTTGGAGTGTATGGAATGAATGGCATATTTAGCATCCGTGTATTTTTGGAATTAGTAACAGTTTATGTTTAAATTACATTAACTTTATGAAAATGTATCAAGGACTCGGAC

Coding sequence (CDS)

ATGATCCAAGAACTATTTGGTGTTTCAGGGCTTTTAGCTGCAGCTGGAGACGCTAAAATCTCCATCAATGGTTCAATTCTAAATTCTTCTTCTCTTTCTGCAGCCTCGTCCGCCGCTATAACCACCACCTCCTCTGTGGCTACCGTTTCTGTGGCTGCCGCCAAGACAACAACCGCATCAAATTCCGAAGGCCAAAACTTGCGTTGCCCCAGATGCGATTCTTCAAACACTAAATTCTGTTACTATAACAACTACAACCTCACTCAACCTCGCCACTTTTGCAAAACATGTCGCCGTTATTGGACCAAAGGTGGGGTCCTCAGAAATGTCCCCATCGGAGGTGGGTGTCGGAAGAACAAGAGCGCGGCGGCTGGGAGGGTGAAAACGGCGTCGTCGGAGAAATTGGGTCGGGTTGGGCTAGATGACGATATAGTATCCTCGCCCTCGCAAATTCTGTGGGGCTCGCCGCAGAATTCTCATCTCTTGGCCATTGTGAGATCTGCCGCCCAAAATCAAAACCCTAGCCCTAATAATCACGCTCGGACGATGGGGTTTGACCCGGTCAACTGCAGCTCTTACTGGAGGAACAATCCGAGCCAAGTTATCCACCAACAAAATCAAAATGGGTATGTCCATGGTGGCGGCTGCAGCAGTGGGATTCAGGAGCTGTATCAGAAACTTAAGACTGCTTCTAGCAGTTATTTCACCGACGGTCTACAGGGATCGAGGGCGGTGGGGGGTGTGGGTACGGCGGCAATGGCAACGGCTCCGGTGGGAGGCGGCGAAACTACAGGTTATTGGAACCCAGCTTTTTCTTGGTCTGATGTTCATGCTAGTGCTAATGAAGCATATCCTTAG

Protein sequence

MIQELFGVSGLLAAAGDAKISINGSILNSSSLSAASSAAITTTSSVATVSVAAAKTTTASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRKNKSAAAGRVKTASSEKLGRVGLDDDIVSSPSQILWGSPQNSHLLAIVRSAAQNQNPSPNNHARTMGFDPVNCSSYWRNNPSQVIHQQNQNGYVHGGGCSSGIQELYQKLKTASSSYFTDGLQGSRAVGGVGTAAMATAPVGGGETTGYWNPAFSWSDVHASANEAYP

Homology

[Close]

BLAST of Sed0003513 vs. NCBI nr
Match: XP_038881317.1 (dof zinc finger protein DOF2.4-like [Benincasa hispida])

HSP 1 Score: 376.7 bits (966), Expect = 1.8e-100
Identity = 223/339 (65.78%), Postives = 249/339 (73.45%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISINGSILNSS---SLSAASSAAITTTSSVATVSVAAAKTT 60
           MIQELFGVSGLLA+AGD KISINGSIL+SS   SL A+++AA T T++ AT   A A +T
Sbjct: 1   MIQELFGVSGLLASAGDTKISINGSILDSSPSTSLPASATAAATATTTTAT--TATATST 60

Query: 61  TASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCR 120
           T+SNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGGCR
Sbjct: 61  TSSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCR 120

Query: 121 KNKSAA-----------AGRVKTASSEKLGRVG------LDDDIVSSPSQILWGSPQNSH 180
           KNKSAA           AG++KT SSE LGRVG      LD +I+SSP+QILWGSPQNSH
Sbjct: 121 KNKSAAATVAAAVGKSTAGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQNSH 180

Query: 181 LLAIVRSAAQNQNPSP-------NN--------HARTMGFD---PVN-------CSSYWR 240
           LLA++RSA Q+ NP+        NN        HA+TMGFD   P         CSSYWR
Sbjct: 181 LLAVLRSATQSPNPNNLAASHVINNDPPQTTLFHAKTMGFDDPAPATHFSSLGLCSSYWR 240

Query: 241 NNPSQVIHQQNQNGYVHGG-----GCSSGIQELYQKLKTASSSYFTDGLQGSRAVGGVGT 286
           NN +QV HQ  QNGY HGG     G + GIQ+LYQKLK++S++YFTDG QGS  V  V T
Sbjct: 241 NNQTQVHHQ--QNGYPHGGVGQLHGGAGGIQDLYQKLKSSSNNYFTDGHQGSVGVTNVVT 300

[Close]

BLAST of Sed0003513 vs. NCBI nr
Match: XP_008440237.1 (PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 4.8e-98
Identity = 223/344 (64.83%), Postives = 246/344 (71.51%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISING--SILNSS---SLSAASSAAITTTSSVATVSVAAAK 60
           MIQELFGVSGLLAAAGD KISIN   SIL+SS   SLSA+++AA   T++ AT +  A  
Sbjct: 1   MIQELFGVSGLLAAAGDTKISINNTCSILDSSPSTSLSASATAATNATNATATTTATA-- 60

Query: 61  TTTASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGG 120
            TT+SNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGG
Sbjct: 61  -TTSSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120

Query: 121 CRKNKSAAA-----------GRVKTASSEKLGRVG------LDDDIVSSPSQILWGSPQN 180
           CRKNKSAAA           G++KT SSE LGRVG      LD +I+SSP+QILWGSPQN
Sbjct: 121 CRKNKSAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQN 180

Query: 181 SHLLAIVRSAAQNQNPSPNN------------------HARTMGFD--PVN--------C 240
           SHLLAI+RSA   QNP+PNN                  HART GFD  P          C
Sbjct: 181 SHLLAILRSA--TQNPNPNNLAASHVISNDPPPSTTPFHARTTGFDDPPAGTHVSSLGLC 240

Query: 241 SSYWRNNPSQVIHQQNQNGYVHGG-----GCSSGIQELYQKLKTASSSYFTDGLQGSRAV 286
           SSYWRNN +QV HQ  QNGY HGG     G +SGIQELYQKLK++S++YFTDG QGS  V
Sbjct: 241 SSYWRNNQNQVHHQ--QNGYPHGGGDQVHGGASGIQELYQKLKSSSNNYFTDGHQGSVGV 300

[Close]

BLAST of Sed0003513 vs. NCBI nr
Match: TYK12911.1 (dof zinc finger protein DOF5.3-like [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-97
Identity = 222/344 (64.53%), Postives = 245/344 (71.22%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISING--SILNSS---SLSAASSAAITTTSSVATVSVAAAK 60
           MIQELFGVSGLLAAAGD KISIN   SIL+SS   SLSA+++AA    ++ AT +  A  
Sbjct: 1   MIQELFGVSGLLAAAGDTKISINNTCSILDSSPSTSLSASATAATNANNATATTTATA-- 60

Query: 61  TTTASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGG 120
            TT+SNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGG
Sbjct: 61  -TTSSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120

Query: 121 CRKNKSAAA-----------GRVKTASSEKLGRVG------LDDDIVSSPSQILWGSPQN 180
           CRKNKSAAA           G++KT SSE LGRVG      LD +I+SSP+QILWGSPQN
Sbjct: 121 CRKNKSAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQN 180

Query: 181 SHLLAIVRSAAQNQNPSPNN------------------HARTMGFD--PVN--------C 240
           SHLLAI+RSA   QNP+PNN                  HART GFD  P          C
Sbjct: 181 SHLLAILRSA--TQNPNPNNLAASHVISNDPPPSTTPFHARTTGFDDPPAGTHVSSLGLC 240

Query: 241 SSYWRNNPSQVIHQQNQNGYVHGG-----GCSSGIQELYQKLKTASSSYFTDGLQGSRAV 286
           SSYWRNN +QV HQ  QNGY HGG     G +SGIQELYQKLK++S++YFTDG QGS  V
Sbjct: 241 SSYWRNNQNQVHHQ--QNGYPHGGGDQVHGGASGIQELYQKLKSSSNNYFTDGHQGSVGV 300

[Close]

BLAST of Sed0003513 vs. NCBI nr
Match: XP_004141929.1 (dof zinc finger protein DOF5.3 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 6.9e-97
Identity = 222/339 (65.49%), Postives = 244/339 (71.98%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISING--SILNSSSLSAASSAAITTTSSVATVSVAAAKTTT 60
           MIQELFGVSGLLAAAGD KISIN   SIL+SS  ++ S++A  T +S ATV+  A   TT
Sbjct: 1   MIQELFGVSGLLAAAGDTKISINNTCSILDSSPSTSLSASA--TAASNATVTTTAT-PTT 60

Query: 61  ASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRK 120
           +SNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGGCRK
Sbjct: 61  SSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 120

Query: 121 NKSAAA-----------GRVKTASSEKLGRVG------LDDDIVSSPSQILWGSPQNSHL 180
           NKSAAA           G++KT SSE LGRVG      LD +I+SSP+QILWGSPQNSHL
Sbjct: 121 NKSAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQNSHL 180

Query: 181 LAIVRSAAQNQNPSP-------NN---------HARTMGFD--PVN--------CSSYWR 240
           LAI+RSA QN NPS        NN         HARTMGFD  P          CSSYWR
Sbjct: 181 LAILRSATQNPNPSNLTASHVINNDPPPSTTPFHARTMGFDDPPAGPHVSSLGLCSSYWR 240

Query: 241 NNPSQVIHQQNQNGYVHGGG-----CSSGIQELYQKLKTASSSYFTDGLQGSRAVGGVGT 286
           NN +QV HQ  QNGY HGGG      +SGIQELYQKLK++S++YF+D  QGS  V  V T
Sbjct: 241 NNQNQVHHQ--QNGYPHGGGDQVHSGASGIQELYQKLKSSSNNYFSDSHQGSVGVTNVAT 300

[Close]

BLAST of Sed0003513 vs. NCBI nr
Match: KAG6604198.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.8 bits (935), Expect = 6.9e-97
Identity = 217/335 (64.78%), Postives = 241/335 (71.94%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISIN--GSILNSSSLSAASSAAITTTSSVATVSVAAAKTT- 60
           MIQELFGVSGLLAAAGD KIS     SIL+SSS S ++S  ++  ++ AT +  AA T+ 
Sbjct: 1   MIQELFGVSGLLAAAGDTKISTTNASSILDSSSSSPSTS--LSAVAATATTAAGAATTSA 60

Query: 61  TASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCR 120
           T+SNSE QNLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGGCR
Sbjct: 61  TSSNSEAQNLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCR 120

Query: 121 KNKSA------AAGRVKTASSEKLGRVGLD-----DDIVSSPSQILWGSPQNSHLLAIVR 180
           KNKSA      AAG++KT SSE LGRVG       D  + SP+QILWGSPQNSHLL+I+R
Sbjct: 121 KNKSAAVVGKSAAGKMKTLSSEILGRVGFGTGSALDHEIMSPTQILWGSPQNSHLLSILR 180

Query: 181 SAAQNQNPSPNN-----------------------HARTMGFDPVN-------CSSYWRN 240
           SA QNQNP+PNN                       HARTMGFDP         CSSYWR 
Sbjct: 181 SATQNQNPNPNNLVGSHVSNDPPATASATATATPFHARTMGFDPATHISSLGLCSSYWRK 240

Query: 241 NPSQVIHQQNQNGYVHGG-----GCSSGIQELYQKLKTASSSYFTDGLQGSRAVGGVGTA 286
           N SQV H Q QNG  HGG     G + GIQELYQKLK++SS+YF++G QGS  V   GTA
Sbjct: 241 NQSQV-HPQ-QNGIPHGGGDQVQGGAGGIQELYQKLKSSSSNYFSNGQQGSVGVTNGGTA 300

[Close]

BLAST of Sed0003513 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 65  QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRKNKSAAA 124
           Q+L+CPRC+S NTKFCYYNNYNL+QPRHFCK CRRYWTKGGVLRNVP+GGGCRK K +  
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKT 108

Query: 125 GRVKTASSEKLGRVGLDDDIVSSPSQILWGSPQNSHLLAIVRS 168
            +V ++SS        DD  V   S    GS  +S   ++  S
Sbjct: 109 KQVPSSSSADKPTTTQDDHHVEEKSST--GSHSSSESSSLTAS 149

[Close]

BLAST of Sed0003513 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.9e-26
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 67  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRK-NKSAAAG 126
           L+CPRCDSSNTKFCYYNNYNLTQPRHFCK CRRYWT+GG LRNVP+GGGCR+ NK    G
Sbjct: 77  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 136

Query: 127 RVKTASS 133
            +K++SS
Sbjct: 137 NLKSSSS 143

[Close]

BLAST of Sed0003513 vs. ExPASy Swiss-Prot
Match: Q9ZV33 (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 8.7e-26
Identity = 76/190 (40.00%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 37  SAAITTTSSVATVSVAAAKTTTASNSEGQN--LRCPRCDSSNTKFCYYNNYNLTQPRHFC 96
           +AA TT    +    AA +   A NS+     L+CPRCDS+NTKFCY+NNYNLTQPRHFC
Sbjct: 62  TAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFC 121

Query: 97  KTCRRYWTKGGVLRNVPIGGGCRKNKSAAAGRVKTASSEKLGRVGLDDDIVSSPSQILWG 156
           K CRRYWT+GG LRNVP+GGGCR+NK   +G  K++SS +  +         S S +   
Sbjct: 122 KACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQ---------STSMVNAT 181

Query: 157 SPQNSHLLAIVRSAAQNQNPSPNNHARTMGFD----PVNCSSYWRNNPSQVIHQQNQNGY 216
           SP N+  + +  ++     P+  N  +  G       +N ++    N S      N  G+
Sbjct: 182 SPTNTSNVQLQTNSQFPFLPTLQNLTQLGGIGLNLAAINGNNGGNGNTSSSF--LNDLGF 240

Query: 217 VHGGGCSSGI 221
            HGG  S  +
Sbjct: 242 FHGGNTSGPV 240

[Close]

BLAST of Sed0003513 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.5e-25
Identity = 70/159 (44.03%), Postives = 93/159 (58.49%), Query Frame = 0


Query: 67  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRKNK---SAA 126
           LRCPRCDS+NTKFCYYNNY+LTQPR+FCK+CRRYWTKGG LRN+P+GGGCRKNK   S+A
Sbjct: 55  LRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSA 114

Query: 127 AGRVKTASSEKLGRVGLDDDIVSSPSQILWGSPQNSHL-LAIVRSAAQNQNPSPNNHART 186
           A  ++T           D  + S+      G   N H+ L++  +    Q+P  ++    
Sbjct: 115 ARSLRTTPEP----ASHDGKVFSAAG--FNGYSNNEHIDLSLAFALLNKQHPGSSSQ--- 174

Query: 187 MGFDPVNCSSYWRNNPSQV-IHQQNQNGYVHGGGCSSGI 221
           +GF     SS+  +        QQ +N     G  SSG+
Sbjct: 175 LGFHSELGSSHQSDMEGMFGTSQQKENATYAFGNGSSGL 204

[Close]

BLAST of Sed0003513 vs. ExPASy Swiss-Prot
Match: O80928 (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.3e-25
Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 67  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRKNKSAAA-- 126
           L+CPRC+S+NTKFCY+NNY+LTQPRHFCKTCRRYWT+GG LRNVP+GGGCR+N+   +  
Sbjct: 89  LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNS 148

Query: 127 --GRVKTASSEKLGRVGLDDDIVSSPSQILWGSPQNSHLLAIVRSAAQNQNPSPNN 179
                 TA+S        +   +S+     +G  Q S +L+ + S A+  NP+ N+
Sbjct: 149 NNNNNSTATSNNTSFSSGNASTISTILSSHYGGNQES-ILSQILSPARLMNPTYNH 203

[Close]

BLAST of Sed0003513 vs. ExPASy TrEMBL
Match: A0A1S3B085 (dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656 GN=LOC103484752 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.3e-98
Identity = 223/344 (64.83%), Postives = 246/344 (71.51%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISING--SILNSS---SLSAASSAAITTTSSVATVSVAAAK 60
           MIQELFGVSGLLAAAGD KISIN   SIL+SS   SLSA+++AA   T++ AT +  A  
Sbjct: 1   MIQELFGVSGLLAAAGDTKISINNTCSILDSSPSTSLSASATAATNATNATATTTATA-- 60

Query: 61  TTTASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGG 120
            TT+SNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGG
Sbjct: 61  -TTSSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120

Query: 121 CRKNKSAAA-----------GRVKTASSEKLGRVG------LDDDIVSSPSQILWGSPQN 180
           CRKNKSAAA           G++KT SSE LGRVG      LD +I+SSP+QILWGSPQN
Sbjct: 121 CRKNKSAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQN 180

Query: 181 SHLLAIVRSAAQNQNPSPNN------------------HARTMGFD--PVN--------C 240
           SHLLAI+RSA   QNP+PNN                  HART GFD  P          C
Sbjct: 181 SHLLAILRSA--TQNPNPNNLAASHVISNDPPPSTTPFHARTTGFDDPPAGTHVSSLGLC 240

Query: 241 SSYWRNNPSQVIHQQNQNGYVHGG-----GCSSGIQELYQKLKTASSSYFTDGLQGSRAV 286
           SSYWRNN +QV HQ  QNGY HGG     G +SGIQELYQKLK++S++YFTDG QGS  V
Sbjct: 241 SSYWRNNQNQVHHQ--QNGYPHGGGDQVHGGASGIQELYQKLKSSSNNYFTDGHQGSVGV 300

[Close]

BLAST of Sed0003513 vs. ExPASy TrEMBL
Match: A0A5D3CM66 (Dof zinc finger protein DOF5.3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005050 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 8.8e-98
Identity = 222/344 (64.53%), Postives = 245/344 (71.22%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISING--SILNSS---SLSAASSAAITTTSSVATVSVAAAK 60
           MIQELFGVSGLLAAAGD KISIN   SIL+SS   SLSA+++AA    ++ AT +  A  
Sbjct: 1   MIQELFGVSGLLAAAGDTKISINNTCSILDSSPSTSLSASATAATNANNATATTTATA-- 60

Query: 61  TTTASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGG 120
            TT+SNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGG
Sbjct: 61  -TTSSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120

Query: 121 CRKNKSAAA-----------GRVKTASSEKLGRVG------LDDDIVSSPSQILWGSPQN 180
           CRKNKSAAA           G++KT SSE LGRVG      LD +I+SSP+QILWGSPQN
Sbjct: 121 CRKNKSAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQN 180

Query: 181 SHLLAIVRSAAQNQNPSPNN------------------HARTMGFD--PVN--------C 240
           SHLLAI+RSA   QNP+PNN                  HART GFD  P          C
Sbjct: 181 SHLLAILRSA--TQNPNPNNLAASHVISNDPPPSTTPFHARTTGFDDPPAGTHVSSLGLC 240

Query: 241 SSYWRNNPSQVIHQQNQNGYVHGG-----GCSSGIQELYQKLKTASSSYFTDGLQGSRAV 286
           SSYWRNN +QV HQ  QNGY HGG     G +SGIQELYQKLK++S++YFTDG QGS  V
Sbjct: 241 SSYWRNNQNQVHHQ--QNGYPHGGGDQVHGGASGIQELYQKLKSSSNNYFTDGHQGSVGV 300

[Close]

BLAST of Sed0003513 vs. ExPASy TrEMBL
Match: A0A0A0KGA6 (F-box family protein OS=Cucumis sativus OX=3659 GN=Csa_6G490130 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.3e-97
Identity = 222/339 (65.49%), Postives = 244/339 (71.98%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISING--SILNSSSLSAASSAAITTTSSVATVSVAAAKTTT 60
           MIQELFGVSGLLAAAGD KISIN   SIL+SS  ++ S++A  T +S ATV+  A   TT
Sbjct: 1   MIQELFGVSGLLAAAGDTKISINNTCSILDSSPSTSLSASA--TAASNATVTTTAT-PTT 60

Query: 61  ASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRK 120
           +SNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGGCRK
Sbjct: 61  SSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 120

Query: 121 NKSAAA-----------GRVKTASSEKLGRVG------LDDDIVSSPSQILWGSPQNSHL 180
           NKSAAA           G++KT SSE LGRVG      LD +I+SSP+QILWGSPQNSHL
Sbjct: 121 NKSAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQNSHL 180

Query: 181 LAIVRSAAQNQNPSP-------NN---------HARTMGFD--PVN--------CSSYWR 240
           LAI+RSA QN NPS        NN         HARTMGFD  P          CSSYWR
Sbjct: 181 LAILRSATQNPNPSNLTASHVINNDPPPSTTPFHARTMGFDDPPAGPHVSSLGLCSSYWR 240

Query: 241 NNPSQVIHQQNQNGYVHGGG-----CSSGIQELYQKLKTASSSYFTDGLQGSRAVGGVGT 286
           NN +QV HQ  QNGY HGGG      +SGIQELYQKLK++S++YF+D  QGS  V  V T
Sbjct: 241 NNQNQVHHQ--QNGYPHGGGDQVHSGASGIQELYQKLKSSSNNYFSDSHQGSVGVTNVAT 300

[Close]

BLAST of Sed0003513 vs. ExPASy TrEMBL
Match: A0A6J1GDY3 (dof zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453075 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.3e-97
Identity = 217/335 (64.78%), Postives = 241/335 (71.94%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISIN--GSILNSSSLSAASSAAITTTSSVATVSVAAAKTT- 60
           MIQELFGVSGLLAAAGD KIS     SIL+SSS S ++S  ++  ++ AT +  AA T+ 
Sbjct: 1   MIQELFGVSGLLAAAGDTKISTTNASSILDSSSSSPSTS--LSAVAATATTAAGAATTSA 60

Query: 61  TASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCR 120
           T+SNSE QNLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGGCR
Sbjct: 61  TSSNSEAQNLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCR 120

Query: 121 KNKSA------AAGRVKTASSEKLGRVGLD-----DDIVSSPSQILWGSPQNSHLLAIVR 180
           KNKSA      AAG++KT SSE LGRVG       D  + SP+QILWGSPQNSHLL+I+R
Sbjct: 121 KNKSAAVVGKSAAGKMKTLSSEILGRVGFGTGSALDHEIMSPTQILWGSPQNSHLLSILR 180

Query: 181 SAAQNQNPSPNN-----------------------HARTMGFDPVN-------CSSYWRN 240
           SA QNQNP+PNN                       HARTMGFDP         CSSYWR 
Sbjct: 181 SATQNQNPNPNNLVGSHVSNDPPGTAAATATATPFHARTMGFDPATHISSLGLCSSYWRK 240

Query: 241 NPSQVIHQQNQNGYVHGG-----GCSSGIQELYQKLKTASSSYFTDGLQGSRAVGGVGTA 286
           N SQV H Q QNG  HGG     G + GIQELYQKLK++SS+YF++G QGS  V   GTA
Sbjct: 241 NQSQV-HPQ-QNGIPHGGGDQVQGGAGGIQELYQKLKSSSSNYFSNGQQGSVGVTNGGTA 300

[Close]

BLAST of Sed0003513 vs. ExPASy TrEMBL
Match: A0A6J1IV75 (dof zinc finger protein DOF3.7-like OS=Cucurbita maxima OX=3661 GN=LOC111478855 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 1.0e-93
Identity = 211/338 (62.43%), Postives = 238/338 (70.41%), Query Frame = 0


Query: 1   MIQELFGVSGLLAAAGDAKISIN--GSILNSSSLSAASSAAITTTSSVATVSVAAAKTT- 60
           MIQELFGVSGLLAAAGD KIS     SIL+SSS S ++S  ++  ++ AT +   A T+ 
Sbjct: 1   MIQELFGVSGLLAAAGDTKISTTNASSILDSSSSSPSTS--LSAVAATATTAAGVATTSA 60

Query: 61  TASNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCR 120
           T+SNSE QNLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGG LRNVPIGGGCR
Sbjct: 61  TSSNSEAQNLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCR 120

Query: 121 KNKSA------AAGRVKTASSEKLGRVGLD-----DDIVSSPSQILWGSPQNSHLLAIVR 180
           KNK+A      AAG++KT SSE LGRVG       D  + SP+QILWGSPQNSHLL+I+R
Sbjct: 121 KNKTAAVVGKSAAGKMKTLSSEILGRVGFGTGSALDHEIMSPTQILWGSPQNSHLLSILR 180

Query: 181 SAAQNQNPSPNN-------------------------HARTMGFDPVN-------CSSYW 240
           SA QNQNP+PNN                         HARTMGFDP         CSSYW
Sbjct: 181 SATQNQNPNPNNHVGSHVINDPPATAAATTTATATPFHARTMGFDPATHISSLGLCSSYW 240

Query: 241 RNNPSQVIHQQNQNGYVHGG---GCSSGIQELYQKLKTASSSYFTDGLQGSRAVGGVGTA 286
           R N SQ+  QQN   +V G    G + GIQELYQKLK++SS+YF++G QGS  V   GTA
Sbjct: 241 RKNQSQIHPQQNGIPHVGGDQVQGGAGGIQELYQKLKSSSSNYFSNGQQGSVGVTNGGTA 300

[Close]

BLAST of Sed0003513 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 )

HSP 1 Score: 121.7 bits (304), Expect = 9.5e-28
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 65  QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRKNKSAAA 124
           Q+L+CPRC+S NTKFCYYNNYNL+QPRHFCK CRRYWTKGGVLRNVP+GGGCRK K +  
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKT 108

Query: 125 GRVKTASSEKLGRVGLDDDIVSSPSQILWGSPQNSHLLAIVRS 168
            +V ++SS        DD  V   S    GS  +S   ++  S
Sbjct: 109 KQVPSSSSADKPTTTQDDHHVEEKSST--GSHSSSESSSLTAS 149

[Close]

BLAST of Sed0003513 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 67  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRK-NKSAAAG 126
           L+CPRCDSSNTKFCYYNNYNLTQPRHFCK CRRYWT+GG LRNVP+GGGCR+ NK    G
Sbjct: 77  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 136

Query: 127 RVKTASS 133
            +K++SS
Sbjct: 137 NLKSSSS 143

[Close]

BLAST of Sed0003513 vs. TAIR 10
Match: AT1G07640.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 67  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRK-NKSAAAG 126
           L+CPRCDSSNTKFCYYNNYNLTQPRHFCK CRRYWT+GG LRNVP+GGGCR+ NK    G
Sbjct: 21  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 80

Query: 127 RVKTASS 133
            +K++SS
Sbjct: 81  NLKSSSS 87

[Close]

BLAST of Sed0003513 vs. TAIR 10
Match: AT1G07640.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 67  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGVLRNVPIGGGCRK-NKSAAAG 126
           L+CPRCDSSNTKFCYYNNYNLTQPRHFCK CRRYWT+GG LRNVP+GGGCR+ NK    G
Sbjct: 85  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 144

Query: 127 RVKTASS 133
            +K++SS
Sbjct: 145 NLKSSSS 151

[Close]

BLAST of Sed0003513 vs. TAIR 10
Match: AT2G28810.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.0 bits (297), Expect = 6.2e-27
Identity = 76/190 (40.00%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 37  SAAITTTSSVATVSVAAAKTTTASNSEGQN--LRCPRCDSSNTKFCYYNNYNLTQPRHFC 96
           +AA TT    +    AA +   A NS+     L+CPRCDS+NTKFCY+NNYNLTQPRHFC
Sbjct: 62  TAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFC 121

Query: 97  KTCRRYWTKGGVLRNVPIGGGCRKNKSAAAGRVKTASSEKLGRVGLDDDIVSSPSQILWG 156
           K CRRYWT+GG LRNVP+GGGCR+NK   +G  K++SS +  +         S S +   
Sbjct: 122 KACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQ---------STSMVNAT 181

Query: 157 SPQNSHLLAIVRSAAQNQNPSPNNHARTMGFD----PVNCSSYWRNNPSQVIHQQNQNGY 216
           SP N+  + +  ++     P+  N  +  G       +N ++    N S      N  G+
Sbjct: 182 SPTNTSNVQLQTNSQFPFLPTLQNLTQLGGIGLNLAAINGNNGGNGNTSSSF--LNDLGF 240

Query: 217 VHGGGCSSGI 221
            HGG  S  +
Sbjct: 242 FHGGNTSGPV 240

The following BLAST results are available for this feature:

BLAST of Sed0003513 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881317.1	1.8e-100	65.78	dof zinc finger protein DOF2.4-like [Benincasa hispida]	[more]
XP_008440237.1	4.8e-98	64.83	PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo]	[more]
TYK12911.1	1.8e-97	64.53	dof zinc finger protein DOF5.3-like [Cucumis melo var. makuwa]	[more]
XP_004141929.1	6.9e-97	65.49	dof zinc finger protein DOF5.3 [Cucumis sativus]	[more]
KAG6604198.1	6.9e-97	64.78	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0003513 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDR0	1.3e-26	57.28	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
Q8L9V6	3.9e-26	77.61	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]
Q9ZV33	8.7e-26	40.00	Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV...	[more]
Q84TE9	2.5e-25	44.03	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
O80928	4.3e-25	49.14	Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV...	[more]

BLAST of Sed0003513 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B085	2.3e-98	64.83	dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656 GN=LOC103484752 PE=4...	[more]
A0A5D3CM66	8.8e-98	64.53	Dof zinc finger protein DOF5.3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0KGA6	3.3e-97	65.49	F-box family protein OS=Cucumis sativus OX=3659 GN=Csa_6G490130 PE=4 SV=1	[more]
A0A6J1GDY3	3.3e-97	64.78	dof zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453075 PE=...	[more]
A0A6J1IV75	1.0e-93	62.43	dof zinc finger protein DOF3.7-like OS=Cucurbita maxima OX=3661 GN=LOC111478855 ...	[more]

BLAST of Sed0003513 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60850.1	9.5e-28	57.28	OBF binding protein 4	[more]
AT1G07640.2	2.8e-27	77.61	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.1	2.8e-27	77.61	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.3	2.8e-27	77.61	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28810.1	6.2e-27	40.00	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 66..121 e-value: 2.1E-32 score: 111.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 69..105
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 67..121 score: 29.338516
None	No IPR available	PANTHER	PTHR31992:SF135	F-BOX FAMILY PROTEIN	coord: 13..179
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 13..179
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 196..278
None	No IPR available	PANTHER	PTHR31992:SF135	F-BOX FAMILY PROTEIN	coord: 196..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003513.1	Sed0003513.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding