Homology
BLAST of Sed0003475 vs. NCBI nr
Match:
KAG6582566.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018949.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 627.5 bits (1617), Expect = 8.1e-176
Identity = 319/410 (77.80%), Postives = 367/410 (89.51%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRKAS------IDRTLRVVSSRRRC--LAVVAAIVDQ 60
METS C+IL++ H KQP +NGT+ S R LRV+S RRRC LA+VAAIV++
Sbjct: 1 METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLAIVAAIVEE 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V L S EKPRFRW EVGSDI E QKQAIS+LPPKM+KRCKA+MKQIICFSP+ G+L+D
Sbjct: 61 VHTLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
+LAAWVRIMKPKRADWL VLKHL++LDHPLYI+VAEAAL+E+TFEASTRDYTKII++YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
+NQLEDAE++L MKERGFA DQI LTTMIHIYSKAD+LNLA+QTFE++K+LE+PLD++S
Sbjct: 181 RNQLEDAERILLCMKERGFACDQITLTTMIHIYSKADELNLAKQTFEDIKLLEEPLDRRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
Y AMIMA+IRAG+PE+GENILKEMD K+IYAGSEVYKA+LRAYSMA NAEGAQR+FDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPD+KLCGLLINAYLMAG+S+KA+I+FDNMRRAGLEPSDKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKE L+VGKEAS +LAAW KRLGVVEEVELVLREYA KEAS
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410
BLAST of Sed0003475 vs. NCBI nr
Match:
XP_022147089.1 (pentatricopeptide repeat-containing protein At1g01970 [Momordica charantia])
HSP 1 Score: 624.8 bits (1610), Expect = 5.2e-175
Identity = 320/410 (78.05%), Postives = 364/410 (88.78%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRK------ASIDRTLRVVSSRRRC--LAVVAAIVDQ 60
M T C+I+++ H +QP +NG + S+++ RV SSRR C LAV AAIV++
Sbjct: 1 MGTFPCNIIYQLHPRQPLVNGIAEGSCYCYLGGSVEQRRRVFSSRRSCSQLAVAAAIVER 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V E SE EK RFRW EVGSDI E QKQAISRLPPKM+KRCKALM+QIICFSP+KG+L+D
Sbjct: 61 VRETGSEIEKLRFRWVEVGSDITETQKQAISRLPPKMAKRCKALMRQIICFSPQKGNLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
LL AWVRIMKPKRADWLLVLKHL+L +HP YI+VAEAALLEKTFEASTRD+TKII++YGK
Sbjct: 121 LLTAWVRIMKPKRADWLLVLKHLRLFNHPFYIEVAEAALLEKTFEASTRDFTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
QN+LEDAEK+L SMKE+GFA DQI LTTM+HIYSKADKLNLA+QTFEELK+LEQPLDK+S
Sbjct: 181 QNRLEDAEKILLSMKEKGFACDQITLTTMVHIYSKADKLNLAKQTFEELKLLEQPLDKRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
YGAMIMAYIRAG+P++GE+IL+EMDAKEIYAGSEVYKA+LRAYSM GNAEGAQR+FDAIQ
Sbjct: 241 YGAMIMAYIRAGMPQEGESILREMDAKEIYAGSEVYKALLRAYSMTGNAEGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPDEKLCGLLINAYLMAG+++K RISFDNMR+AGLEP DKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDEKLCGLLINAYLMAGQTQKVRISFDNMRKAGLEPVDKCIALVLAAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKENL+VGKEAS ILAAWFKRLGV+EEVELVLREYA K AS
Sbjct: 361 AALELLIDLEKENLMVGKEASEILAAWFKRLGVIEEVELVLREYAMKGAS 410
BLAST of Sed0003475 vs. NCBI nr
Match:
XP_022924339.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924340.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924341.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata])
HSP 1 Score: 624.0 bits (1608), Expect = 8.9e-175
Identity = 318/410 (77.56%), Postives = 366/410 (89.27%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRKAS------IDRTLRVVSSRRRC--LAVVAAIVDQ 60
METS C+IL++ H KQP +NGT+ S R LRV+S RRRC L VAAIV++
Sbjct: 1 METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V +L S EKPRFRW EVGSDI E QKQAIS+LPPKM+KRCKA+MKQIICFSP+ G+L+D
Sbjct: 61 VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
+LAAWVRIMKPKRADWL VLKHL++LDHPLYI+VAEAAL+E+TFEASTRDYTKII++YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
+NQLEDAE++L SM+ERGFA DQI LTTMIHIYSKAD+L+LA+QTFEELK+LE+PLD++S
Sbjct: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
Y AMIMA+IRAG+PE+GENILKEMD K+IYAGSEVYKA+LRAYSMA NAEGAQR+FDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPD+KLCGLLINAYLMA +S+KA+I+FDNMRRAGLEPSDKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKE L+VGKEAS +LAAW KRLGVVEEVELVLREYA KEAS
Sbjct: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410
BLAST of Sed0003475 vs. NCBI nr
Match:
XP_023526280.1 (pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526281.1 pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 623.2 bits (1606), Expect = 1.5e-174
Identity = 318/410 (77.56%), Postives = 366/410 (89.27%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRKAS------IDRTLRVVSSRRRC--LAVVAAIVDQ 60
M TS C+IL++ H KQP +NGT+ S R LRV+S RRRC LA VAAIV++
Sbjct: 1 MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLATVAAIVEE 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V L S EKPRFRW EVGSDI E QKQAIS+LPPKM+KRCKA+MKQIICFSP+ G+L+D
Sbjct: 61 VHTLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
+LAAWVRIMKPKRADWL VLKHL++LDHPLYI+VAEAAL+E+TFEASTRDYTKII++YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
+NQLEDAE++L SM+ERGFA DQI LTTMIHIYSKAD+L+LA+QTFEELK+LE+PLD++S
Sbjct: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
Y AMIMA+IRAG+PE+GENILKEMD K+IYAGSEVYKA+LRAYSMA NA+GAQR+FDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNADGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPD+KLCGLLINAYLMAG+S+KA+I+FDNMRRAGLEPSDKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKE L+VGKEAS +LAAW KRLGVVEEVELVLREYA KEAS
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410
BLAST of Sed0003475 vs. NCBI nr
Match:
XP_022980308.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980309.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980310.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980311.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980312.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980313.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima])
HSP 1 Score: 622.9 bits (1605), Expect = 2.0e-174
Identity = 318/410 (77.56%), Postives = 364/410 (88.78%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRKAS------IDRTLRVVSSRRRC--LAVVAAIVDQ 60
M TS C+IL++ H KQP +NGT+ S R LRV+S RR C LA VAAIV++
Sbjct: 1 MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEE 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V +L S EKPRFRW EVGSDI E QKQAIS+LPPKM+KRCKA+MKQIICF P+ G L+D
Sbjct: 61 VHKLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
+LAAWVRIMKPKRADWL VLKHL++LDHPLYI+VAEAAL+E+TFEASTRDYTKII++YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
QNQLEDAE++L SM+ERGFA DQI LTTMIHIYSKAD+LNLA+QTFEELK+LE+PLD++S
Sbjct: 181 QNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
Y AMIMA++RAG+PE+GENILKEMD K+IYAGSEVYKA+LRAYSMA NAEGAQR+FDAIQ
Sbjct: 241 YDAMIMAFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPD+KLCGLLINAYLMAG+S+KA+I+FDNMRRAGLEPSDKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKE L+VGKEAS +LAAW KRLGVVEEVELVLREYA KEAS
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410
BLAST of Sed0003475 vs. ExPASy Swiss-Prot
Match:
Q9LPC4 (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1)
HSP 1 Score: 449.9 bits (1156), Expect = 3.0e-125
Identity = 217/360 (60.28%), Postives = 289/360 (80.28%), Query Frame = 0
Query: 42 CLAVVAAIVDQVPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQII 101
C + + +V E + F WA+VG ++ E Q +AI+R+P KMSKRC+ALM+QII
Sbjct: 47 CKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQII 106
Query: 102 CFSPRKGDLADLLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTR 161
CFSP KG DLL AW+R M P RADWL +LK LK LD P YI+VAE +LL+ +FEA+ R
Sbjct: 107 CFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEANAR 166
Query: 162 DYTKIIYHYGKQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEEL 221
DYTKII++YGK NQ+EDAE+ L SMK RGF DQ+ LT M+ +YSKA LAE+TF E+
Sbjct: 167 DYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEI 226
Query: 222 KMLEQPLDKKSYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNA 281
K+L +PLD +SYG+MIMAYIRAG+PEKGE++L+EMD++EI AG EVYKA+LR YSM G+A
Sbjct: 227 KLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGGDA 286
Query: 282 EGAQRLFDAIQLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALI 341
EGA+R+FDA+Q+A I PD KLCGLLINAY ++G+S+ AR++F+NMR+AG++ +DKC+AL+
Sbjct: 287 EGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVALV 346
Query: 342 LGAYEKENRLNTALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEA 401
L AYEKE +LN AL L++LEK+++++GKEASA+LA WFK+LGVVEEVEL+LRE++S ++
Sbjct: 347 LAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFSSSQS 406
BLAST of Sed0003475 vs. ExPASy Swiss-Prot
Match:
Q940Z1 (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX=3702 GN=At1g19525 PE=2 SV=2)
HSP 1 Score: 160.2 bits (404), Expect = 4.8e-38
Identity = 86/209 (41.15%), Postives = 126/209 (60.29%), Query Frame = 0
Query: 186 MKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKSYGAMIMAYIRAGI 245
M + G D + T ++H+YSK+ A + FE LK D+K Y AMI+ Y+ AG
Sbjct: 1 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60
Query: 246 PEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQLAAIPP-DEKLCG 305
P+ GE ++KEM AKE+ A EVY A+LRAY+ G+A GA + ++Q A+ P +
Sbjct: 61 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120
Query: 306 LLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLNTALELLIDLEKE 365
L + AY AG+ KA+ +FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEK+
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180
Query: 366 NLIVGKEASAILAAWFKRLGVVEEVELVL 394
+ +G +L W LG++EE E +L
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLL 209
BLAST of Sed0003475 vs. ExPASy Swiss-Prot
Match:
O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 1.7e-14
Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 172 KQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKK 231
++ E+A V MK MI++Y KA K ++ + + E++ + +
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 232 SYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAI 291
+Y A++ A+ R G+ EK E I +++ + VY A++ +YS AG GA +F +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 292 QLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRL 351
Q PD ++++AY AG A F+ M+R G+ P+ K L+L AY K +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 352 NTALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLRE 396
++ ++ + + + + RLG ++E +L E
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
BLAST of Sed0003475 vs. ExPASy Swiss-Prot
Match:
Q5G1S8 (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2)
HSP 1 Score: 80.1 bits (196), Expect = 6.3e-14
Identity = 54/211 (25.59%), Postives = 102/211 (48.34%), Query Frame = 0
Query: 154 KTFEASTRDYTKIIYHYGKQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNL 213
K F Y ++Y + ++ E ++V M++ GF D++ T+IH+Y K +L+L
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 214 AEQTFEELKMLE-QPLDKKSYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAML 273
A Q ++++K L + D +Y +I + +A + ++ EM I + Y A++
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 274 RAYSMAGNAEGAQRLFDAIQLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLE 333
Y+ AG E A+ F + + PD ++++ L E+RKA + +M G
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 334 PSDKCIALILGAYEKENRLNTALELLIDLEK 364
PS L++ KENR + + + D+E+
Sbjct: 541 PSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
BLAST of Sed0003475 vs. ExPASy Swiss-Prot
Match:
Q9FMQ1 (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g12100 PE=2 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 1.6e-12
Identity = 55/246 (22.36%), Postives = 102/246 (41.46%), Query Frame = 0
Query: 157 EASTRDYTKIIYHYGKQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQ 216
E S + ++ K +EDAE VL MK+ GF D + + YS +K A
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 217 TFEELKMLEQPLDKKSYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYS 276
+E ++ + ++ A + G EK E IL AK + +Y M+ Y
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 277 MAGNAEGAQRLFDAIQLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDK 336
G+ GA+ +A++ + PD LI + GE A + M+ G+ PS +
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 337 CIALILGAYEKENRLNTALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREY 396
+++G Y ++ + ++L ++E + + L + + E ++V R+
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 397 ASKEAS 403
+ S
Sbjct: 521 EDRGVS 526
BLAST of Sed0003475 vs. ExPASy TrEMBL
Match:
A0A6J1D001 (pentatricopeptide repeat-containing protein At1g01970 OS=Momordica charantia OX=3673 GN=LOC111016111 PE=4 SV=1)
HSP 1 Score: 624.8 bits (1610), Expect = 2.5e-175
Identity = 320/410 (78.05%), Postives = 364/410 (88.78%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRK------ASIDRTLRVVSSRRRC--LAVVAAIVDQ 60
M T C+I+++ H +QP +NG + S+++ RV SSRR C LAV AAIV++
Sbjct: 1 MGTFPCNIIYQLHPRQPLVNGIAEGSCYCYLGGSVEQRRRVFSSRRSCSQLAVAAAIVER 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V E SE EK RFRW EVGSDI E QKQAISRLPPKM+KRCKALM+QIICFSP+KG+L+D
Sbjct: 61 VRETGSEIEKLRFRWVEVGSDITETQKQAISRLPPKMAKRCKALMRQIICFSPQKGNLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
LL AWVRIMKPKRADWLLVLKHL+L +HP YI+VAEAALLEKTFEASTRD+TKII++YGK
Sbjct: 121 LLTAWVRIMKPKRADWLLVLKHLRLFNHPFYIEVAEAALLEKTFEASTRDFTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
QN+LEDAEK+L SMKE+GFA DQI LTTM+HIYSKADKLNLA+QTFEELK+LEQPLDK+S
Sbjct: 181 QNRLEDAEKILLSMKEKGFACDQITLTTMVHIYSKADKLNLAKQTFEELKLLEQPLDKRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
YGAMIMAYIRAG+P++GE+IL+EMDAKEIYAGSEVYKA+LRAYSM GNAEGAQR+FDAIQ
Sbjct: 241 YGAMIMAYIRAGMPQEGESILREMDAKEIYAGSEVYKALLRAYSMTGNAEGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPDEKLCGLLINAYLMAG+++K RISFDNMR+AGLEP DKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDEKLCGLLINAYLMAGQTQKVRISFDNMRKAGLEPVDKCIALVLAAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKENL+VGKEAS ILAAWFKRLGV+EEVELVLREYA K AS
Sbjct: 361 AALELLIDLEKENLMVGKEASEILAAWFKRLGVIEEVELVLREYAMKGAS 410
BLAST of Sed0003475 vs. ExPASy TrEMBL
Match:
A0A6J1EER0 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3662 GN=LOC111431862 PE=4 SV=1)
HSP 1 Score: 624.0 bits (1608), Expect = 4.3e-175
Identity = 318/410 (77.56%), Postives = 366/410 (89.27%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRKAS------IDRTLRVVSSRRRC--LAVVAAIVDQ 60
METS C+IL++ H KQP +NGT+ S R LRV+S RRRC L VAAIV++
Sbjct: 1 METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V +L S EKPRFRW EVGSDI E QKQAIS+LPPKM+KRCKA+MKQIICFSP+ G+L+D
Sbjct: 61 VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
+LAAWVRIMKPKRADWL VLKHL++LDHPLYI+VAEAAL+E+TFEASTRDYTKII++YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
+NQLEDAE++L SM+ERGFA DQI LTTMIHIYSKAD+L+LA+QTFEELK+LE+PLD++S
Sbjct: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
Y AMIMA+IRAG+PE+GENILKEMD K+IYAGSEVYKA+LRAYSMA NAEGAQR+FDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPD+KLCGLLINAYLMA +S+KA+I+FDNMRRAGLEPSDKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKE L+VGKEAS +LAAW KRLGVVEEVELVLREYA KEAS
Sbjct: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410
BLAST of Sed0003475 vs. ExPASy TrEMBL
Match:
A0A6J1IR15 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=3661 GN=LOC111479721 PE=4 SV=1)
HSP 1 Score: 622.9 bits (1605), Expect = 9.6e-175
Identity = 318/410 (77.56%), Postives = 364/410 (88.78%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTSTRKAS------IDRTLRVVSSRRRC--LAVVAAIVDQ 60
M TS C+IL++ H KQP +NGT+ S R LRV+S RR C LA VAAIV++
Sbjct: 1 MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEE 60
Query: 61 VPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLAD 120
V +L S EKPRFRW EVGSDI E QKQAIS+LPPKM+KRCKA+MKQIICF P+ G L+D
Sbjct: 61 VHKLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSD 120
Query: 121 LLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGK 180
+LAAWVRIMKPKRADWL VLKHL++LDHPLYI+VAEAAL+E+TFEASTRDYTKII++YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 181 QNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKS 240
QNQLEDAE++L SM+ERGFA DQI LTTMIHIYSKAD+LNLA+QTFEELK+LE+PLD++S
Sbjct: 181 QNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRS 240
Query: 241 YGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQ 300
Y AMIMA++RAG+PE+GENILKEMD K+IYAGSEVYKA+LRAYSMA NAEGAQR+FDAIQ
Sbjct: 241 YDAMIMAFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 301 LAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLN 360
LAAIPPD+KLCGLLINAYLMAG+S+KA+I+FDNMRRAGLEPSDKCIAL+L AYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 361 TALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEAS 403
ALELLIDLEKE L+VGKEAS +LAAW KRLGVVEEVELVLREYA KEAS
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410
BLAST of Sed0003475 vs. ExPASy TrEMBL
Match:
A0A0A0L7L8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126080 PE=4 SV=1)
HSP 1 Score: 611.7 bits (1576), Expect = 2.2e-171
Identity = 315/406 (77.59%), Postives = 360/406 (88.67%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTS-TRKASIDRTLRVVSSRRRC--LAVVAAIVDQVPELV 60
M+ S +IL++ H P +NGTS T + R V+SSRRRC +A AIVD++ +L
Sbjct: 1 MQISTSNILYQLH--LPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLE 60
Query: 61 SESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLADLLAAW 120
SE EKPRFRW EVG DI E QKQAIS+LPPKM+KRCKA+MKQIICFSP+KG+L+D+LAAW
Sbjct: 61 SEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAW 120
Query: 121 VRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGKQNQLE 180
VRIMKP+RADWLLVLKHL++L+HPLYIQVAEAAL E TFEA+TRDYTKII+HYGKQNQLE
Sbjct: 121 VRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLE 180
Query: 181 DAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKSYGAMI 240
DAEKVL SM+ERGF DQI LTTMIHIYSKADKLNLA+QTFEELK+LEQPLDK+S+GAMI
Sbjct: 181 DAEKVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRSFGAMI 240
Query: 241 MAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQLAAIP 300
MAY+RAG PE+GE ILKEMDAK+IYAGSEVYKA+LRAYSM GNAEGAQR+FDAIQLAAI
Sbjct: 241 MAYVRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAIT 300
Query: 301 PDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLNTALEL 360
PDEKLCGLLINAYLMAG+SR+A+I+FDNMRRAG+EPSDKCIAL L AYEKENRLN+ALEL
Sbjct: 301 PDEKLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALEL 360
Query: 361 LIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEASR 404
LIDLEK+N++VGKEAS ILAAW KRLGVVEEVE+VLREY KE +R
Sbjct: 361 LIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 404
BLAST of Sed0003475 vs. ExPASy TrEMBL
Match:
A0A5D3D032 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004020 PE=4 SV=1)
HSP 1 Score: 607.4 bits (1565), Expect = 4.2e-170
Identity = 311/406 (76.60%), Postives = 362/406 (89.16%), Query Frame = 0
Query: 1 METSACSILHRFHSKQPPINGTS-TRKASIDRTLRVVSSRRRC--LAVVAAIVDQVPELV 60
M S +IL++ H P +NGTS T + + V++SRRRC +A V AIVD++ +L
Sbjct: 1 MHISTSNILYQLH--LPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLE 60
Query: 61 SESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLADLLAAW 120
SE EKPRFRW EVG +I E QKQAIS+LPPKM+K+CKA+MKQIICFSP+KG+L+D+LAAW
Sbjct: 61 SEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAW 120
Query: 121 VRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGKQNQLE 180
VRIMKP+RADWL VLKHL++L+HPLYIQVAEAAL+E TFEA+TRDYTKII+HYGKQNQLE
Sbjct: 121 VRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLE 180
Query: 181 DAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKSYGAMI 240
DAEKVL +M+ERGFA DQI LTTMIHIYSKADKL LA+QTFEELK+LEQ LDK+SYGAMI
Sbjct: 181 DAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMI 240
Query: 241 MAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQLAAIP 300
MAY+RAG+PE+GE ILKEMDAK+IYAGSEVYKA+LRAYSMAG+AEGAQR+FDAIQLAAIP
Sbjct: 241 MAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIP 300
Query: 301 PDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLNTALEL 360
PDEKLCGLL+NAYLMAG+SRKA+I+FDNMRRAG+EPSDKCIAL L AYEKENRLN ALEL
Sbjct: 301 PDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALEL 360
Query: 361 LIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEASR 404
LIDLEK+N++VGKEAS ILAAW KRLGVVEE+E+VLREY +KE SR
Sbjct: 361 LIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 404
BLAST of Sed0003475 vs. TAIR 10
Match:
AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 449.9 bits (1156), Expect = 2.2e-126
Identity = 217/360 (60.28%), Postives = 289/360 (80.28%), Query Frame = 0
Query: 42 CLAVVAAIVDQVPELVSESEKPRFRWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQII 101
C + + +V E + F WA+VG ++ E Q +AI+R+P KMSKRC+ALM+QII
Sbjct: 47 CKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQII 106
Query: 102 CFSPRKGDLADLLAAWVRIMKPKRADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTR 161
CFSP KG DLL AW+R M P RADWL +LK LK LD P YI+VAE +LL+ +FEA+ R
Sbjct: 107 CFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEANAR 166
Query: 162 DYTKIIYHYGKQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEEL 221
DYTKII++YGK NQ+EDAE+ L SMK RGF DQ+ LT M+ +YSKA LAE+TF E+
Sbjct: 167 DYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEI 226
Query: 222 KMLEQPLDKKSYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNA 281
K+L +PLD +SYG+MIMAYIRAG+PEKGE++L+EMD++EI AG EVYKA+LR YSM G+A
Sbjct: 227 KLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGGDA 286
Query: 282 EGAQRLFDAIQLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALI 341
EGA+R+FDA+Q+A I PD KLCGLLINAY ++G+S+ AR++F+NMR+AG++ +DKC+AL+
Sbjct: 287 EGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVALV 346
Query: 342 LGAYEKENRLNTALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLREYASKEA 401
L AYEKE +LN AL L++LEK+++++GKEASA+LA WFK+LGVVEEVEL+LRE++S ++
Sbjct: 347 LAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFSSSQS 406
BLAST of Sed0003475 vs. TAIR 10
Match:
AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 237.3 bits (604), Expect = 2.2e-62
Identity = 126/329 (38.30%), Postives = 198/329 (60.18%), Query Frame = 0
Query: 66 RWAEVGSDIAEFQKQAISRLPPKMSKRCKALMKQIICFSPRKGDLADLLAAWVRIMKPKR 125
+W E+ I E +++A R P ++ +CK +M+++ D + LLA W +++P R
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQ-EGDDPSGLLAEWAELLEPNR 350
Query: 126 ADWLLVLKHLKLLDHPLYIQVAEAALLEKTFEASTRDYTKIIYHYGKQNQLEDAEKVLFS 185
DW+ ++ L+ + Y++VAE L EK+F AS DY+K+I+ + K+N +ED E++L
Sbjct: 351 VDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKK 410
Query: 186 MKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKKSYGAMIMAYIRAGI 245
M + G D + T ++H+YSK+ A + FE LK D+K Y AMI+ Y+ AG
Sbjct: 411 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 470
Query: 246 PEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAIQLAAIPP-DEKLCG 305
P+ GE ++KEM AKE+ A EVY A+LRAY+ G+A GA + ++Q A+ P +
Sbjct: 471 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 530
Query: 306 LLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRLNTALELLIDLEKE 365
L + AY AG+ KA+ +FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEK+
Sbjct: 531 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 590
Query: 366 NLIVGKEASAILAAWFKRLGVVEEVELVL 394
+ +G +L W LG++EE E +L
Sbjct: 591 GIEIGVITYTVLVDWMANLGLIEEAEQLL 618
BLAST of Sed0003475 vs. TAIR 10
Match:
AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 82.0 bits (201), Expect = 1.2e-15
Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 172 KQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKK 231
++ E+A V MK MI++Y KA K ++ + + E++ + +
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 232 SYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAI 291
+Y A++ A+ R G+ EK E I +++ + VY A++ +YS AG GA +F +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 292 QLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRL 351
Q PD ++++AY AG A F+ M+R G+ P+ K L+L AY K +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 352 NTALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLRE 396
++ ++ + + + + RLG ++E +L E
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
BLAST of Sed0003475 vs. TAIR 10
Match:
AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 82.0 bits (201), Expect = 1.2e-15
Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 172 KQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNLAEQTFEELKMLEQPLDKK 231
++ E+A V MK MI++Y KA K ++ + + E++ + +
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 322
Query: 232 SYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAMLRAYSMAGNAEGAQRLFDAI 291
+Y A++ A+ R G+ EK E I +++ + VY A++ +YS AG GA +F +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 292 QLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLEPSDKCIALILGAYEKENRL 351
Q PD ++++AY AG A F+ M+R G+ P+ K L+L AY K +
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 352 NTALELLIDLEKENLIVGKEASAILAAWFKRLGVVEEVELVLRE 396
++ ++ + + + + RLG ++E +L E
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
BLAST of Sed0003475 vs. TAIR 10
Match:
AT3G18110.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 80.1 bits (196), Expect = 4.5e-15
Identity = 54/211 (25.59%), Postives = 102/211 (48.34%), Query Frame = 0
Query: 154 KTFEASTRDYTKIIYHYGKQNQLEDAEKVLFSMKERGFAYDQIILTTMIHIYSKADKLNL 213
K F Y ++Y + ++ E ++V M++ GF D++ T+IH+Y K +L+L
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 214 AEQTFEELKMLE-QPLDKKSYGAMIMAYIRAGIPEKGENILKEMDAKEIYAGSEVYKAML 273
A Q ++++K L + D +Y +I + +A + ++ EM I + Y A++
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 274 RAYSMAGNAEGAQRLFDAIQLAAIPPDEKLCGLLINAYLMAGESRKARISFDNMRRAGLE 333
Y+ AG E A+ F + + PD ++++ L E+RKA + +M G
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 334 PSDKCIALILGAYEKENRLNTALELLIDLEK 364
PS L++ KENR + + + D+E+
Sbjct: 541 PSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6582566.1 | 8.1e-176 | 77.80 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022147089.1 | 5.2e-175 | 78.05 | pentatricopeptide repeat-containing protein At1g01970 [Momordica charantia] | [more] |
XP_022924339.1 | 8.9e-175 | 77.56 | pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_0... | [more] |
XP_023526280.1 | 1.5e-174 | 77.56 | pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo... | [more] |
XP_022980308.1 | 2.0e-174 | 77.56 | pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022... | [more] |
Match Name | E-value | Identity | Description | |
Q9LPC4 | 3.0e-125 | 60.28 | Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX... | [more] |
Q940Z1 | 4.8e-38 | 41.15 | Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX... | [more] |
O82178 | 1.7e-14 | 25.00 | Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... | [more] |
Q5G1S8 | 6.3e-14 | 25.59 | Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop... | [more] |
Q9FMQ1 | 1.6e-12 | 22.36 | Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D001 | 2.5e-175 | 78.05 | pentatricopeptide repeat-containing protein At1g01970 OS=Momordica charantia OX=... | [more] |
A0A6J1EER0 | 4.3e-175 | 77.56 | pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1IR15 | 9.6e-175 | 77.56 | pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0L7L8 | 2.2e-171 | 77.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126080 PE=4 SV=1 | [more] |
A0A5D3D032 | 4.2e-170 | 76.60 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G01970.1 | 2.2e-126 | 60.28 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G19520.1 | 2.2e-62 | 38.30 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT2G35130.1 | 1.2e-15 | 25.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G35130.2 | 1.2e-15 | 25.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G18110.1 | 4.5e-15 | 25.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |