Sed0003405 (gene) Chayote v1

Overview
NameSed0003405
Typegene
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
LocationLG05: 22079486 .. 22090242 (+)
RNA-Seq ExpressionSed0003405
SyntenySed0003405
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCACGCATCTCTTTCTCAGTCTCTTCGTCTCTTTCTCTGCTGATCTGTTTTTTTTTTTGGACAAAATCTCTGTATTCAAAGAATGAATGAAGTTCTGTGAAACCTATTTTCTCTGCTATTCATCTTCGACGGCTCTTAGATAGTAAAAAAGGTATGATTTTTTTTTTTTGAATCGTTTCCGATACGCGGGTGAATCGTTTCTTTTTCACTCTGAAAACGTCCGATTCGGGCGATTTGCGATTCAAAATTACGATGTGGATCGATTTCTCCAGGATTCGTTTCGAATCGTACGTTTTGAATCGCAAAACCACGTTTTTGATAATCTTGGTTGAGACCCCACAACAAAACTCTGTTGTTGGACATAAGCACCACTATTTGTTGAATGTTGCTCGCGAGTTCTTTCAATCACGAGTACCCTTGGTTTTTTGGGGCGATTGTGGTTTAATGACATCTTATCTTCTAAACCGAGTACCCATGCCCTTACTTTCAAATGCAACACAGTATTCATTATTATATAATGGGGGCGGGGTTGATTGCACTCATCTCTGGTCTTTCAAGTGTTTTTTATGCTTCAACCTTATCTGCTCATCGTCGGAAATTTGATCCTCGTAGTAGACATTGTGTGTTTTTGGGCTATCTGCCAGGTATTAAAGGGTATAAGTTGCTCGATATTGACAATCACCAGGTGTTCATATCTCGACATGTTGTTTTCATGGAAGGTTCTTTCCCTTTTCACTCGTTAGTATCTCTCAGTGAAATAGAAGAAAGGGATGTTGTTCCTTTGCCTGCTGGTCACCTTGCTATAGGTTGTAAGTTGGTTAATAAGATTCAACATAAACCTGATGGCACTGTTGATAAAGTATAAGGTTAGTCTCGTGGAAATAAGGGTATAGAAAACGAGAATGGGTTGATTTTTGAGACACCTTTTCCTTGTGGCCAAGATTGTGACGGTGAGGGTGTTGTTTACTCTCACTTCTTCGTATCATTGGCAAGTTCAACTGTATGTAAACGATGCCATCTTAAATTGTGATCTGTTTGAAGAGATTTACACAACTCTACCTTTGAGATATTATTCTGATTCCAAAACAAGATCTTCTGTTGTTTCCCTTGTTTGCAAGTTTTATAAGTTGTTATATGGTTTGAGGCAGTGGTTTTCTAAGTTTTTGTTAGGGTTATTTTAGTAAATATCTAAAGAAGTTTGTTAGACATTTAGTTATAAATAGAGGTGTTGTGTATAGGGAAAGTAGGGGATATTTTGGCCATTTCGGTTTTGGTCTTCAGTGGGCTAAAAAATGGGGGGATCCAAGTAAGAAACTTGGTTTATCTTGTATTTAGTTTCTTTTATTTCGTAATACAATCCAGATTCTTTGTTTCTTTGATAGGAAATAGAAAACTTTCATTGATAGGATGAAAAGTTACAAAAAAAAAATTACATAAAGCCTTTCCAATGATAGATTAGAGAAGATAAACTATATTGCTTGAAAGGTTGAGTTTTTTGGGACCAATGTTAAAGCATGAAAAGTGATAGAATCAATTATGCTCTCTTCATGGTGGGTAGAAGAAAAGATATAGTTGTTCCTTAATGTCAAGAGCTTCCACTAGAATGCATAGATAAATAGAAGCCACAAGGTTTTCTTATCATCCTTAAAAGGATGTCCATGAATAGTGTATAGAAGTAAGCCCTTTATGTCACCCAGTCTAACCATCTTCCATCCTAAAGGGTTGTTCAAGAAAGACCATATATCATTAGCCACTCTGCAATTATTAAAGAGGTGTATATGAGATTCTAATTTACATTTACATAATGGGCACATGCTTGGTGATAAAGCCATCCTTGGCCACTTGATCTGCGTCTTATCCTGGTATTAAGAGCACCATGATTGAGCTCCAATATAAAGAATTTAACCTTCTTTGGTTGTTGGCCTTTCCAAATATCAATATAGAAATCTTTCGTCTCATTATTGGTGGATAACAGATGCTGCAGTAATGATTTAGCTGAAAATTGTTCATCCCTCTGTAAAGGCCATTTCCATTTGTCAGTTTTGCCATTAATAATGATGCCGTCCAAAACATGGGATAAAGCAGCCCATTCCACAATCTCATTATCTTTGATTCCATGATCTATTCAAGGGGTCCCAACATTCACACACAGTGGCTTGCTTTAGTAAAGAAAGGTTATGGAGGAGGGAATGTCTATTTAAGGGAAGTGTTACCAATCCAGACGTCAAGCCAAAAGGAGGTAGCTTTGCCCGATCCAATGACATGGACAATGTTGGAATGAATCAAGTGTTTCCATAGATTGATGTTTTTCCATGGGCCTTTAGATGTTCAAATTCTAGATTCTACCAACTGGTACTAGATTGGTACGATTCTCTAAAAAATTTTGTAATACCCCTACACTTACCAGACTTATTGATATATCTTTGGTGTGGACATCCTTTTAACGGTGAAACAGAGATATTGTGGCAGCATTTTTATGGAGGATTTGGCTGATTCGTAATGGGAACTCTTCAATGACAAGGACTTTTCTCGAAATTTCACCAAATCCATTACTCATTTAGCATTATTTTGGTGCAAAAGATCTAAACGCTTTTCTAATTATAGCCTTAGTGTCTTACTAACCATGATGAAAGCGATTTACAATTTTTTCTTCAAGGAATCCATCGTTCGATAGCGTTGATCAATTATTGGGGAGAAGAATTGAGGCAACTTCGAGAAGAAGAAGAATGAAAGAAAGCTGAGTAGGAAGCTTTGAAACTAAGATGGGAAGAGAGTTTATCAAAACCAATGAAGGAGATGATCAAGATCGTAGGAGTTGAAGTCAAAGAATCAAAGGTGGAAGTCTTACATGTGTTGAAAGAAAGTGAGGAAAATCAAAAGTTCAAAGCTAGTTCGAGTTCAATGAAGGCTAATGATCGAAAAGAAAAAGTCAATTTTGGTGGAGCGGCGACATCCTATACTAGAGAAGAAGACTCTGTGAGTGCCGACAACGAAAAAGAAAACGAGGTGGAAGTTGGTGGCAGCGAAGAAGAAGACATGGCAGATGCTGAAGGAGGAAATAAGATGACGAAGGTCGAATATGGTAGAGAAGAGATGACGACAGCGTGGAGTTTTTGAAGAAAAAGAAAAGAAGATGGGTCTGTCAAGGGACGAAAAAGGTGAACAAAAGGAAAAAGAAATGGTAGTTGTCTGTTCGTGGGGCTGAAGAAGGAAAAAGAGTGACAAATAATTGTAGAAGTTGTTCGACCATTGAAAGAAGAAAAAAAAAGAGTATACTGCAATAACCTGGCAGCTAGGGTTTTAATTTTTTTTTTTGCAATAGTTACTTATGGGAGTCAAAAGAAATAGGCATGTAAAATTGGGAGCTTGAAGCTTTGGGCCACAAAATTTGGAGCTTTAGGCCTCATACGGGGAAGTGTTTGGGTTGTTGGGATGGAAGGGGTTGGGCTGCTTTATTTTTAATTGTCGGGCTGGTTTATTTTTGGCGGGTTTTTTTAGTAGGATTTAAAACAAAAAAAACCTAAGTTTTCATTTTTAAGTGTAGTTTGTATTCCAACACATTGAGGACAAGACGTGTTTTAGGGGCCGACAGTGTTAGAGTTTACATTGGGGGTATTTTAGTAAATATCTAAAGAAGTTCGTTAGATATTTGGTTATAAATAGAGGGGTTGTGTATAGAGAAAAATAGAGAATATTTTGGCCATTTTGGTTTAGATCTTGAGTGAGCTCAAGAATGAAAGGATCCAAGTAACATCTAAACTCAGTTTATCTTGCATTTGGTTTCTTTTATTTCGTTATACAATCTGGTTCTATCAGTGGTGTTTTAATATCCAATGGTTTCATTCGTTCTATAACAATCATTCATTATTCGCTCTAGGACATGGTGGAACCTTTGTTGCTATTTTGGTGTATGTAGTTGTAGATGATACTCTCATTACACACGAGTTAAGACCATGTTAAAATCCAATTTTCTTCTTAAAATTTGGGAGATGCTAAATATTCTTTGGTTCGAAACTATCTTGGTCAAGCAAAGGAATATATATATCACAACGTAAATATTTCCTTCAGCTCCTTGAAGATTATGGTATGTTAGGAGCTGAGGTTGTTTCCCATCTGATGGTGCATAATTTAGCTGATGGTGCATAATTCATCTACCTCTGGTACCGTTTTATCCAATGATGATGCTTTAAACTATAGGTGGTTGATTGGACGACTTTTGTACGTTGAAATTACTCGGCCTAAAATTTCTTTTTTGGTCCTTAAACTTAGTAAATACCTTGCTGCTATACATATTGGGCATTTCCAAGCTCCTCAACACTTATTGAAATATATGATAGCAAGTCGAGGACAAGGTATCTTATTTCAAGGTTCACAGATTTTTCAACTTATTGGGGATCTTGCCCAGACTAACGAAAGTCAGTAACTGATATTTGAGTCTCGTATTTCGTGGAAAAAAAAGAAACAAGTCAGTGTTTCTCGATTTTTAGTTGAAGAAAAATACCTATCTAGTGAAATAACATGGCTCACAAATGTTCTTAAAGATTTGAATGTTCCTGATACTTCTCCTACCTCAGTCTTTTGTGACAATTAGGTAGCAATTGCCATTTATATTGTTGAATTATATTAAATCACGAATCAATTCAAAAGCTTAAGTCAATGGGTTGGGGTAAATTTAATTATATCAACCGACATATTATATCAACCGACATTCCCCTCACTTGTAGGCTTGAGGAATGTCCTACAAGTGGAATTGAATTTTAATCGAGGAAGAAAACGACTCAACAAAGACTTGAACTCGAGACCTACTTTGGTACTATTTTGAATCATGTTTAATCACCAATCAACCCAGAAGCCTAAACTAAAAGATTGGGGTAGATTTAATTATATTAACCAATAGCTACAAATCCTATTTTTCATAAATGCGCCAAGCACATGAGAATAGATTGTCACTTTGTGCGAGTTAAACCGGATCAAGGAGTTTACAAAGATGCAATTGGCAGACATGTTTACTAGGCTGTTATCAGCTGCTATGATTCAATCTTTCATGTCTAAGATGGGAGTTTTCAACTGATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATTAATCATTCAATATTTGGATGACTAAACTCTAACCTAATCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGCCCTAGACCCAACCTTATCATAGAAACCGCCGTTGCCCCAAACCCATTTATACTAAACGAAATGCACAGAAACACCCATGCACGTGACACACACACGTACCAAACCTCTCACTTCTTATGCCTAGTATACACATGCTTACTTGTCGGGGATGTATCAATACCCGCCTCCCAAAGAACCACCTTGTCCTCGAGGTGGAACTCAGAAAATTGAGTATGAAGGAAATTGATTCCCACTTGGCTTCTTCAGGCAAACCATGCTCCCATTGAATCAACCTCTCTCTATCATCTGTAGCCGAAATGGATTCACGCATTTCCAACACCGCAATAGGACGAAAAGTAAAAACCAAATCATTACGCAACCTCGAAGGCACCAGGAATACTGGCAACGAAGTACCAACTGCCTTATGTAAAACAGAAACATGAAATACAGGATGAATGCGCACTGAATCCACAATGGTGACCACTAATTGGTCCTGCCCAATACACTTCCTTAGCCAACTGTTGATATGTTTTTAAAGCACCATGGTGACCACCAATTGGTCCCGCATGAAATTCATGTAGCAACAAAGGAATGGTAGGTGAATCAAGAGGATTACCAAACGACCGTGGAAACACAACAATCCACGATGCAAGGAGAAACCCTTTGGAGCTGACTTGCCATCTAACAATGTCGTGTAAATGGTCATCAAATGTGGATTTGCCTTGACGTGCTCTACAAACCCAGCTGTGTAACCCCAGAAACACAACTCAACATGCCCAATTCACACGTCGGAAAGCGAGACAATGCATCAGGTGCCAAATTCTCTATACCTTTATTGTACTCAATATGAATATCATACCCCAAAAGTTTAGTAACCCAACGTTGATACTCCCCCTCAATCACCCGTTGCTCAAGAAAAAACTTGAGACTCTTTTGATTCGTACGCATAACGAAGTGTTGGCCCAACAAATACACGCGCCACCGCTGAACTGCAAACACAATGGCCATCAATTCGCGTTCATAAATTGATTTACAACGATGCGTAAGTGGCAATGCTCGACTGAAGTAGGATAAAGGTTGACTCTTCTGCATTAATACAACACCAATGCCTATGCCCGATGCATCCGTCTCAACCACAAATGGCTGAGAAAAATCTGGCAAGCAAAGCACCAACATACTAATCATAGCATGTTTCAGACGTTGAAACGAATCCCCAGTCTCCAAAGACCACACAAACTTTCTTTTCTTAAGCAATTGTGTCAAGGGAAACCGCCATAGTGCCATAATTTGCGACAAACTGCCTATAATACCCCGTCAAACCCAGAAAACCATTGAGTTCTTTAATGGAGAGCGTGCTCGGCCAATTCACCATAGGTTCTAACTTTGTTGGATCAATATACACTCCTTCGTTGGATATGAAATGACCAAGATACTCAATATGAGGCACCCCATAATGACATTTCTTAGCATTGGCCACCAAGGCATGCATTTTAAGCAACTCAAAAGTCTTGGTGAGATGGCAATATGATCATCCATAGACACAATATATATCAAAATGTCGTCAAAGGAAGCCAAGACGAACTTTTGCAAATACGGTCGCAAAATTTCATTCATCATCGATTGAAATGTCGCTGGAGCATTCTAAAAACTCATAATGATCCTCATGAGTTCGAAAAGCCATCTTTGGGATATCAGCAGGCTTAACCCGAATTTGGTGATATCCGACCTTGAGATCAATTTTAGAAAAAATCACTGCAACGTGTAACTCATCAAGCAACTCATCGACTAATGGAATCGAAAACTTCTCGATCTCATTCTTTAGAAACTGAGGGTATCTATCTATATGGTCGCACATTAACAAACTCCTTCCTAGCATACAATTCTATAACATGATCACAGTTTCGTTGTGGAGGAAGAGTCGATAAATATTCAAAAACCACAGAATAACGATCTTACAACGGTCATAATTTTGAAGGTACCCTACTCCAAAACTGTGATACTACGGTCTCGCTCTGTGGCCCCATTTTCGCATCCAACAAATTAAGCTCAATTAATAGTCGCTGATCCTCAACTCGCAAAGACTTCATCATCGATTTCAACAAAACTTGAGCTTTGACCAAACTAGGGTCCCCTTGCAACTGAACACACCATGGGCCCACAACAAATTGCATTTGCAGAGCACGATAATCAAACTCCACCTTCCCTAACATCTCTAACCATGCTACCCTTGGGATAACAACCACACTCCCCAAGGGCAGAGGCAAAAAATCGTGAACAATTCGTAGCTCGGCCAGCTAACACCACATACTTACAAACTCCCGCGCTCTCACTGAACCACCAGTGCTAAGGACTATCCCATACTCATTCGAAGGCGACTCCGATAATCCCAGTTTTGCAACTACGTCCTCCAAGATAAAATTATGCGTAGCACCTATGTCCACAAGAATTACCACTTCTAAGCCAAGGATGCTCCCATGTACTTTCAAAGTCTTCGAGGAACTTAAACCAGAACGAGTTCAAGACAATGCTGCCATTTCTTGATCATCATTCGTTCCCCCCATCCTCTACAATCTCAGAAGAATCCTCGGAAGGAAGATTAATTTCCTCAGATTCCGTCAAACTCACCTCATCCCGAACAACCGAGACTTGTAGTGCTTGCAGGATAAGGGCCTAGGCTTTCACCATTCTTTCCTGATCCCACAGTTGAAGAAACAAGCCTTTTCTTTGACTGAACCGCAAAATCATCTTCAATCAATTGAGCCATAAGCATCTTTGCCTTCAACCCAAATGGACACAACTTCCTCATTTCACTTTGAATTTCTTCCTTGAGGCCACTCTCGAATTTTCCTTCCAACAAATTGTCGCTTAAATCCTTCAACTCGATTGTATACTTCTCAAATAGTCGGCGGTATTCTCGAACCGAACCATCTTGTTGAAGACTCATCAATCCAGCATACCTGTTTACTTGCGAAGTCGGCTGGAAACGCTCCAATAAGAACAACCGAAAAGTCCCCAAGGACTGGCGCAGTGGTTGAAGGACTTGGGCTTTGAGGGTATTCTACCCTCAAGGTTTTGAGTTCGAGTCTTCCCTGTGACAGTACTCCTTCGATGTCTCCGGTGCCTGGCCTAGGGACGGGCGTGGTTACCTTGTTTCAAAAAAAAAAAATAACAACAGTCGAAAATTTGGCCACGAACAAATCGAAGAATGATTCTCTTCATATTGATGCCAATCTAAAGCCTCACCTTCCAAACATATCATTGCCGCATCCAATTTATCACTTTTAGTTAGTTGATTCACCAAAAAATACCGTTCTATACGATGAAGCCAATCGATCAGATCCTCATTCTCTGTATCTTTAAACACATGGATTTCAAGCTTTCTCAAATGCATATCAAAGAGAGGAATTTCCTTGTTGGAGCTTGAATGTCACTTTTTACCACATTCTGTTGTATCGAAACAACTTCACCCGATCTTCTTGTTTTGGAACTATTCCTGTGCAAATTCAAATTGGACTCGTGCAGACTCGACTCGCTTGGCGTCATCTTTTGATTCGTATCAGAATTCATCGATTCTTTACCTTTGTGGCTAGATGCGATCACTGCAACAGAATCTTCTGTTTTATGTCTGGAAAACATAGTTTGCAATCTCCCTTAACAGTGCAAATTGCAAATCCCTACGAGGTTTCGAAGCATTTTGCTTCTCCTCCAAGTCGACGATTTGCGAATTGATCAGCGATTCCAATCCCTGTTGCTTCGACGCAACTCCATTGGCGATTTCCCAATCATTCTCGAACGAAACCGAGCTGTGATACCAACATTGGTAGGTTCTACCAATTTTATTATCAAAATACCAAACTACAAGAAGTTCAAGAGCTTCTTCTCTCCAATCTCAAAGAGATACCTAGATAGCAAGAATCGGAATCCTTTTCTTATTCCCGCCCTAACCCATTTATACCAAATGACTTACACATCAACTCCCACGCACGTGACGCACACACACGTACCAAACCTCTCACTTCTTACGCCTAGTATACACATGCTTAATTTCCGGGGACGTATCGGATTAAGAGAAAGTATTCGTACAATTGTGATAATTTCATTGCTAATTAGTGGGAAATAACTCTACTTGTGTCTCAGGCTTCTGTTCTTTTGTGTCTGCATCTATGTATAGGTCCATGGAGATGGAGGCTTAAAATTCTCAGTTTAAGATAGTGCAAATGTCTTATGATTTCCCCTTATGAATTGTTTTTAGCTTTCTTGATTATTAATTGAGAATGCTGCACATCACATAAGTTTTCATTTCACATTTCGTTTTGTGTGCTGATAATTATGGAAATTGGTCATTGTGATAACATAAACACGTCGTCAGCAAGAAAATTTTGATGATATTCTTATCAATTGAATACTGTTCATTGTAAAGAGTTGGTGTCGATAGAACTAACCTCGTTGTCAATGTATCATATGTTAGGTACGGCATCTGTAGCACTTCGTTTAGCATTGATTTGGTTTCTGTGGAGCATTTCCCTCTGGTCAATTCAAGGTGGTTGGTGCTTTTTCTTGGATAAAGCTCTTTGTAGGTCAAGTTAGCATTATTTTAGTTGTCTGCTTTCCTCTTTCTTTTTTGCTTACTGTCTTGGTTATCTGTGTTGTTCTCTCTTTTTCCTTTTTGGCTGATGATTTGCATATGAGGCCTTTTTATTGCACCCTTTTAAATCAAATGATCTGTTATTTTTTATAAGTAAAAAAAAGGAAGCAATTTGCCATTTTGCCAACTTGGTTATTTCTTCCCTGCAGACACATTCCCATTATAAGTACACGAAAATTTACCATATTGTGAGTGATGAAGCAAAATTTTCACTTATTTTGTAGGTTCACATTCAAAATACAGATATTATACCTGATGACACGTCGTCGGAATCTTATTGTTGCGACTGGATTGATAGCCTTTGTATCTGCTGGCTTAGCATTTCCCTTTTACATGGCGTAAGTAAATGGATTCATGGCTGCAATTTTACGCCTTAGAATGAATGAATTTGCAAAAAGTTAATGTAGAAAAGGATTATCATCCAGGTCTTCTAAAAAGCCCGTTATCGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCGTATATAAACACTGGTTCCCGAGACGTTGGACCCGACCACCAAACTTACACCAAGAAGTGATTTATTTATTTTTATTGTTGCTTCTTTTTAATAATGTCCACTGGAAGTTAAATGTTAGTTCATTTTTTAAGTAGAAGAAGACTACATTAAATTGTCTTTCTTTTATGTTGGTTGTTCATTTTCATATATAAATCTGTGTATTGCTCAACATATATATAAAGCTGTGTAAGAAGAATCCCATATCACATAGACCAGGAAATATTACTTCAAAGATGCTCATAAGTGAAACCATTCACTGCCTACATGATCGAAATATAGATTATACTAATTCAAC

mRNA sequence

TTCTCACGCATCTCTTTCTCAGTCTCTTCGTCTCTTTCTCTGCTGATCTGTTTTTTTTTTTGGACAAAATCTCTGTATTCAAAGAATGAATGAAGTTCTGTGAAACCTATTTTCTCTGCTATTCATCTTCGACGGCTCTTAGATAGTAAAAAAGGTACGGCATCTGTAGCACTTCGTTTAGCATTGATTTGGTTTCTGTGGAGCATTTCCCTCTGGTCAATTCAAGGTGGTTGGTGCTTTTTCTTGGATAAAGCTCTTTGTAGGTCAAGTTAGCATTATTTTAGTTGTCTGCTTTCCTCTTTCTTTTTTGCTTACTGTCTTGGTTATCTGTGTTGTTCTCTCTTTTTCCTTTTTGGCTGATGATTTGCATATGAGGCCTTTTTATTGCACCCTTTTAAATCAAATGATCTGTTATTTTTTATAAGTAAAAAAAAGGAAGCAATTTGCCATTTTGCCAACTTGGTTATTTCTTCCCTGCAGACACATTCCCATTATAAGTACACGAAAATTTACCATATTGTGAGTGATGAAGCAAAATTTTCACTTATTTTGTAGGTTCACATTCAAAATACAGATATTATACCTGATGACACGTCGTCGGAATCTTATTGTTGCGACTGGATTGATAGCCTTTGTATCTGCTGGCTTAGCATTTCCCTTTTACATGGCGTCTTCTAAAAAGCCCGTTATCGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCGTATATAAACACTGGTTCCCGAGACGTTGGACCCGACCACCAAACTTACACCAAGAAGTGATTTATTTATTTTTATTGTTGCTTCTTTTTAATAATGTCCACTGGAAGTTAAATGTTAGTTCATTTTTTAAGTAGAAGAAGACTACATTAAATTGTCTTTCTTTTATGTTGGTTGTTCATTTTCATATATAAATCTGTGTATTGCTCAACATATATATAAAGCTGTGTAAGAAGAATCCCATATCACATAGACCAGGAAATATTACTTCAAAGATGCTCATAAGTGAAACCATTCACTGCCTACATGATCGAAATATAGATTATACTAATTCAAC

Coding sequence (CDS)

ATGAAGCAAAATTTTCACTTATTTTGTAGGTTCACATTCAAAATACAGATATTATACCTGATGACACGTCGTCGGAATCTTATTGTTGCGACTGGATTGATAGCCTTTGTATCTGCTGGCTTAGCATTTCCCTTTTACATGGCGTCTTCTAAAAAGCCCGTTATCGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCGTATATAAACACTGGTTCCCGAGACGTTGGACCCGACCACCAAACTTACACCAAGAAGTGA

Protein sequence

MKQNFHLFCRFTFKIQILYLMTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Homology
[Close]
BLAST of Sed0003405 vs. NCBI nr
Match: XP_008465426.1 (PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo] >XP_016903386.1 PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 7.3e-29
Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 0 

Query: 21 MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVG 80
          MTRRRNLIVA GLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 81 PDHQTYTKK 90
          PDHQTYTKK
Sbjct: 61 PDHQTYTKK 69

[Close]
BLAST of Sed0003405 vs. NCBI nr
Match: XP_022140323.1 (uncharacterized protein LOC111011024 [Momordica charantia])

HSP 1 Score: 136.7 bits (343), Expect = 9.6e-29
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0 

Query: 21 MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVG 80
          MTRRRN+IVATGLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVG 60

Query: 81 PDHQTYTKK 90
          PDHQTY+KK
Sbjct: 61 PDHQTYSKK 69

[Close]
BLAST of Sed0003405 vs. NCBI nr
Match: XP_022944261.1 (uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944262.1 uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944263.1 uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944264.1 uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944266.1 uncharacterized protein LOC111448766 [Cucurbita moschata])

HSP 1 Score: 134.0 bits (336), Expect = 6.2e-28
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 24 RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 83
          RRN+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH
Sbjct: 3  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 62

Query: 84 QTYTKK 90
          QTYTKK
Sbjct: 63 QTYTKK 68

[Close]
BLAST of Sed0003405 vs. NCBI nr
Match: KAG7010668.1 (hypothetical protein SDJN02_27463, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.0 bits (336), Expect = 6.2e-28
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 24 RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 83
          RRN+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH
Sbjct: 30 RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 89

Query: 84 QTYTKK 90
          QTYTKK
Sbjct: 90 QTYTKK 95

[Close]
BLAST of Sed0003405 vs. NCBI nr
Match: XP_004145769.1 (uncharacterized protein LOC101222012 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 6.2e-28
Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 21 MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVG 80
          MTRRRNLIVA GLIAF SAGLAFPFYMASSKKPVIDP KPL PQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVG 60

Query: 81 PDHQTYTKK 90
          PDHQTYTKK
Sbjct: 61 PDHQTYTKK 69

[Close]
BLAST of Sed0003405 vs. ExPASy TrEMBL
Match: A0A1S3CQB9 (uncharacterized protein LOC103503042 OS=Cucumis melo OX=3656 GN=LOC103503042 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.5e-29
Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 0 

Query: 21 MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVG 80
          MTRRRNLIVA GLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 81 PDHQTYTKK 90
          PDHQTYTKK
Sbjct: 61 PDHQTYTKK 69

[Close]
BLAST of Sed0003405 vs. ExPASy TrEMBL
Match: A0A6J1CHR8 (uncharacterized protein LOC111011024 OS=Momordica charantia OX=3673 GN=LOC111011024 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.6e-29
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0 

Query: 21 MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVG 80
          MTRRRN+IVATGLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVG 60

Query: 81 PDHQTYTKK 90
          PDHQTY+KK
Sbjct: 61 PDHQTYSKK 69

[Close]
BLAST of Sed0003405 vs. ExPASy TrEMBL
Match: A0A6J1FTX8 (uncharacterized protein LOC111448766 OS=Cucurbita moschata OX=3662 GN=LOC111448766 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 24 RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 83
          RRN+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH
Sbjct: 3  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 62

Query: 84 QTYTKK 90
          QTYTKK
Sbjct: 63 QTYTKK 68

[Close]
BLAST of Sed0003405 vs. ExPASy TrEMBL
Match: A0A6J1JB19 (uncharacterized protein LOC111484157 OS=Cucurbita maxima OX=3661 GN=LOC111484157 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.7e-28
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 24 RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 83
          R+N+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH
Sbjct: 3  RQNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 62

Query: 84 QTYTKK 90
          QTYTKK
Sbjct: 63 QTYTKK 68

[Close]
BLAST of Sed0003405 vs. ExPASy TrEMBL
Match: A0A565CU39 (Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS27672 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.3e-27
Identity = 67/88 (76.14%), Postives = 69/88 (78.41%), Query Frame = 0 

Query: 6   HLFCR----FTFKIQILYLMTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPL 65
           HLF R    F F  Q L  M   RN+IVATGL+ F SAGLAFPFYMASSKKPVIDP KPL
Sbjct: 14  HLFSRESLLFGFTSQTLVAMAPSRNIIVATGLVVFASAGLAFPFYMASSKKPVIDPTKPL 73

Query: 66  PPQATFRGPYINTGSRDVGPDHQTYTKK 90
           PPQATFRGPYINTGSRDVGPDHQ Y KK
Sbjct: 74  PPQATFRGPYINTGSRDVGPDHQNYPKK 101

[Close]
BLAST of Sed0003405 vs. TAIR 10
Match: AT5G22875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 1.0e-28
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 21 MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVG 80
          M   RN++VATGL+ F SAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MAPSRNIVVATGLVLFASAGLAFPFYMASSKQPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 81 PDHQTYTKK 90
          PDH+TY KK
Sbjct: 61 PDHRTYPKK 69

[Close]
BLAST of Sed0003405 vs. TAIR 10
Match: AT5G22875.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 1.0e-28
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 21 MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVG 80
          M   RN++VATGL+ F SAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MAPSRNIVVATGLVLFASAGLAFPFYMASSKQPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 81 PDHQTYTKK 90
          PDH+TY KK
Sbjct: 61 PDHRTYPKK 69

The following BLAST results are available for this feature:
BLAST of Sed0003405 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465426.17.3e-2995.65PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo] >XP_016903386.1 P... [more]
XP_022140323.19.6e-2994.20uncharacterized protein LOC111011024 [Momordica charantia][more]
XP_022944261.16.2e-2896.97uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944262.1 unchar... [more]
KAG7010668.16.2e-2896.97hypothetical protein SDJN02_27463, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_004145769.16.2e-2894.20uncharacterized protein LOC101222012 [Cucumis sativus][more]
BLAST of Sed0003405 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0003405 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CQB93.5e-2995.65uncharacterized protein LOC103503042 OS=Cucumis melo OX=3656 GN=LOC103503042 PE=... [more]
A0A6J1CHR84.6e-2994.20uncharacterized protein LOC111011024 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1FTX83.0e-2896.97uncharacterized protein LOC111448766 OS=Cucurbita moschata OX=3662 GN=LOC1114487... [more]
A0A6J1JB198.7e-2895.45uncharacterized protein LOC111484157 OS=Cucurbita maxima OX=3661 GN=LOC111484157... [more]
A0A565CU393.3e-2776.14Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS27672 PE=4 SV... [more]
BLAST of Sed0003405 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22875.11.0e-2882.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G22875.21.0e-2882.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..89
NoneNo IPR availablePANTHERPTHR36070OSJNBA0019G23.7 PROTEINcoord: 17..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0003405.1Sed0003405.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane