Sed0003363 (gene) Chayote v1

Overview


Name	Sed0003363
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Rac-like GTP-binding protein
Location	LG11: 26716957 .. 26720508 (+)
RNA-Seq Expression	Sed0003363
Synteny	Sed0003363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATATAATAGGGAAGGAAAAGAAGAAGAAAGAGAAAAAAAGGGAAAGTGGGTAGTTGTGGCAGAAGGAGGAGAAGGCAGGGGAGCGGTTCAAGCGCATTTCATTTGATTCCCAATTATTTTGGCATCTTTATTTTTGTGTGTTTCCGGTCCTGCAATTCGGGATCTGCATTTCAGGGTTTTCAAGAAATTCACATCATGAACAACACTCGATTCTGAGCCATTTCCATCACCCCATTGTGGTTTAGTTGCAGATCTGGTGCTTCGACATGAGTGCCTCCAGGTTTATAAAGTGCGTTACCGTTGGCGATGGTGCTGTCGGTAAAACCTGTATGTTGATTTCTTACACCAGCAACACCTTCCCCACGGTCAGTTTTTTTCTTTCTTTTTCTTTTCCTGTAATTTTTAGCTTCTGGGTGTGCTTTGATTTTGTATGAGCTGCTTGTTCGAGGGTTTTCATGGATCTTGTGGAACAACCATTTATAGCTACAATGTTTACTTTTTTTTTTTTTTACTAAATGCAATAAAATTAATTACTCTAATGATTTCAAATATGGAAATTGTTTGGCGTGTTCTTTTCTCACTCATGGTTGGAGCTTGTCGAGATGAATTTGTACTCGAATGTGCGCTTTTGGATGCTAATGCACATTTGAAACTTGAAATCACGCAGTATCAGACAGTCTCCATCAGTTGAAATCTCTAACTATTCTGGAAGAGAAGCTTTTGGTTATAGAATTTTGGTTAAAAAAGAATGGGAGGAAACTTGAGTGGTGTATATTTGGGTAGTAGTGTACTTTCACATGCTTTTATGTGGTACAAAATGTTTACCCTTTGAGTTCTTTGGTTTATCATTTTTCATCTTCAATTGGAGATCTTTATTATTATCATCTATAGATAGGTGTATCAATTTATCTTGTTTTTTAAATTGTTTTTTATTTTAAAAAAATTCAAGAAGATTTTTTCTAATCACTTTTTTGGCCTAACTTTTGACTTGAATTTTTTCCCCTCTATCATCAAGCCTACATATTCGTATGGATACTTCAACAATGAGATTTTATCAATCTTTTTTAGTTGATGGTTTTCTTTGCCTAGTTGTTAGTGTAAAATTTATCTAAACGTGACCATTTGTCCATTGAGCTTCAGGATTTTGTTAAGACTCTGCAATAACAAGTTAGTAATTACACAATTAACAGTCACAAGGCATGACTTGGGGTGTCACATTGGTTAAAAACTTGGGTTTTGAAGGTGTGTTCTCCTCAAGATCCCAAGTTCGAGATTCACCTATGATATTAATTTGTAGATACCTCTTATGTTTCCATTACTTTGATGTCTCCTAGTGCCTGGCCTAAGGACTGACATCGTTACCCCGAGTATAGTGGAGCGAAGCTCCAATTTCCCGATTAAAAAAAACAGAAAAATTTGGGGTGCATATTTTCGGTCACAAAAAGGAAACCACGGTTGGAGAGGGTGGCACTCTTCCAACACATACCAGTCTGGTATTTACTCAAAACATACATAAAAGAGGGACTGAAACTTAAGCTAATAATTACAAAAACAAGGACGAAACTACCCTTACTATGGAATTACATTCCTGCCCCTACGAGTGTACACTTGAGTGATTGAGGGCCTAACAGCTTTCCTTAGTTCTTACTCCATGAATGAAACATTTGATCTCCTGTAATCCCCAACGAGCACTTCAATTCTAAATTCAGCACACATGTACCTTATTTGCAGGACTATGTGCCAACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGAAACACTGTCAACCTAGGATTATGGGATACTGCTGGTAACCACACATAATGAGAGTTCTAATTTCTCCTACTAATAATCCAGTTCATATTTTTTTAAGCATAAAAGGAATTTAAAAGTACTCTTTTGAACAGGGCAAGAGGATTACAATAGATTAAGACCTCTGAGTTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCTAGCTATGAAAATGTTGCCAAGAAGGTAGCTTTCTGTGGATGATGTCAATTATTACCCTAATTTGCTGGATATGATCTGTATATGCAAAAATTATGGCTTTCCTGATGGGTTTTTTACATTTTCCAACAGTGGATTCCTGAATTGAGACATTATGCACCTGGTGTTCCAATAGTTCTTGTTGGGACTAAACTTGGTAATGAATATTTATTTGTTTTGAAGTCAGCTTTGTATTTGCACATTATGTTAATCAGTTAGTCTGGTGTTAAGTGTTAACGTAGAGCGATATGTCGGGAAGAGTAATGGGTCAATCGGGATCTTCAACACATCCATCTCTGATAGATATCTTTTCTGCACTTTGTGAGATATATGCATTCCATCAACCAGTTCTTTGTACCCAAGAACTTCCCAAGTCATGGAGACTTGTATCATAATTGTCTAACTGCTCAATGTTTTGATTATTTTTGTGTTGTCCATGTCCCACATTTGATGAGTCAGTTCATACTCATAATATGTAGTTGTTGTCGCATCAACTTCAAGTTTTTTTCTTCTGGTTTTCCCCATTACTTCATTATCAATAACATGAGCCTAACTTAAGTGATTAAGATCTCTCTACTTCTTTTAAGAGTTTGTAAGTTCAATGTGATATTTTCAAAAAAGAAAAGGAAGCAACAACCAAATGATTTTATTCTTCTCACGTGAGGATATTCTCGCAATTCCGAAAATAAGATCATTTATCTCACTGTATTTTATTCTCAGATCTTCGAGATGACAATCAGTTCTTTGTAGATCACCCTGGTGCAGTGCCCATTTCCACTGTTCAGGTAACTTGACATCTACCATTGTTTCTACACATTCAGCATGTACATGAAAAGGCAATTTTCGGTTGTTTTTTCTGTTCTTTACTGTAGGGGGAGGAGTTGAAAAAAGTAATCGGAGCCCCGGCGTATATCGAATGTAGTTCAAAAACTCAGCAGGCATGACATCTATCTGCTTTTGATTTGCACGGCTCCCCTGTTTCTTAACTGTGTATATTTTGTTCAAAGAATTGGTTCAATTGTTTATTGCAGAATGTGAAAGGAGTGTTCGATTCCGCCATTAAAGTGGTGCTGCAGCCACCAAAAACAAAGAAGAAGAAGTCACAGAGTGTCTGTTCCGTCTTATGATCGAGGAAGAATATGATTTTGCTCGTGCCAACCGAAAGAACGACGACTTCATATGTACTCGCCTTTTTCTCAGCATATCTTTAATCCATGTCATTCCAAGGAAGCAGCATATAACGGCCCCAGGCTGACATTCTCAAGATGCAAATACAACAGTGATGATGTTTTGTTTCTTATTTTGCAATCTGTTTGTTAGTGATGGTCAAGATTGCTAACCCCAATTTGTCTGTTGAATTGTTCATGTATTAATGAGACGCCCAAAACTACTGCTCCCTGGGCATGAACATTGTTAGTTCTGGTAACATATATTGCCTAATTCCATTCACACGTGATGATATCTATGACTTGAGTCTATATTAATTAAACATTGAATCTTTTGATCACCAG

mRNA sequence

AATATATAATAGGGAAGGAAAAGAAGAAGAAAGAGAAAAAAAGGGAAAGTGGGTAGTTGTGGCAGAAGGAGGAGAAGGCAGGGGAGCGGTTCAAGCGCATTTCATTTGATTCCCAATTATTTTGGCATCTTTATTTTTGTGTGTTTCCGGTCCTGCAATTCGGGATCTGCATTTCAGGGTTTTCAAGAAATTCACATCATGAACAACACTCGATTCTGAGCCATTTCCATCACCCCATTGTGGTTTAGTTGCAGATCTGGTGCTTCGACATGAGTGCCTCCAGGTTTATAAAGTGCGTTACCGTTGGCGATGGTGCTGTCGGTAAAACCTGTATGTTGATTTCTTACACCAGCAACACCTTCCCCACGGACTATGTGCCAACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGAAACACTGTCAACCTAGGATTATGGGATACTGCTGGGCAAGAGGATTACAATAGATTAAGACCTCTGAGTTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCTAGCTATGAAAATGTTGCCAAGAAGTGGATTCCTGAATTGAGACATTATGCACCTGGTGTTCCAATAGTTCTTGTTGGGACTAAACTTGATCTTCGAGATGACAATCAGTTCTTTGTAGATCACCCTGGTGCAGTGCCCATTTCCACTGTTCAGGGGGAGGAGTTGAAAAAAGTAATCGGAGCCCCGGCGTATATCGAATGTAGTTCAAAAACTCAGCAGAATGTGAAAGGAGTGTTCGATTCCGCCATTAAAGTGGTGCTGCAGCCACCAAAAACAAAGAAGAAGAAGTCACAGAGTGTCTGTTCCGTCTTATGATCGAGGAAGAATATGATTTTGCTCGTGCCAACCGAAAGAACGACGACTTCATATGTACTCGCCTTTTTCTCAGCATATCTTTAATCCATGTCATTCCAAGGAAGCAGCATATAACGGCCCCAGGCTGACATTCTCAAGATGCAAATACAACAGTGATGATGTTTTGTTTCTTATTTTGCAATCTGTTTGTTAGTGATGGTCAAGATTGCTAACCCCAATTTGTCTGTTGAATTGTTCATGTATTAATGAGACGCCCAAAACTACTGCTCCCTGGGCATGAACATTGTTAGTTCTGGTAACATATATTGCCTAATTCCATTCACACGTGATGATATCTATGACTTGAGTCTATATTAATTAAACATTGAATCTTTTGATCACCAG

Coding sequence (CDS)

ATGAGTGCCTCCAGGTTTATAAAGTGCGTTACCGTTGGCGATGGTGCTGTCGGTAAAACCTGTATGTTGATTTCTTACACCAGCAACACCTTCCCCACGGACTATGTGCCAACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGAAACACTGTCAACCTAGGATTATGGGATACTGCTGGGCAAGAGGATTACAATAGATTAAGACCTCTGAGTTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCTAGCTATGAAAATGTTGCCAAGAAGTGGATTCCTGAATTGAGACATTATGCACCTGGTGTTCCAATAGTTCTTGTTGGGACTAAACTTGATCTTCGAGATGACAATCAGTTCTTTGTAGATCACCCTGGTGCAGTGCCCATTTCCACTGTTCAGGGGGAGGAGTTGAAAAAAGTAATCGGAGCCCCGGCGTATATCGAATGTAGTTCAAAAACTCAGCAGAATGTGAAAGGAGTGTTCGATTCCGCCATTAAAGTGGTGCTGCAGCCACCAAAAACAAAGAAGAAGAAGTCACAGAGTGTCTGTTCCGTCTTATGA

Protein sequence

MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKLDLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQPPKTKKKKSQSVCSVL

Homology

[Close]

BLAST of Sed0003363 vs. NCBI nr
Match: XP_004143001.1 (rac-like GTP-binding protein 5 [Cucumis sativus] >XP_008445333.1 PREDICTED: rac-like GTP-binding protein 5 [Cucumis melo] >XP_038886218.1 rac-like GTP-binding protein 5 [Benincasa hispida] >KGN62254.1 hypothetical protein Csa_018754 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 6.4e-102
Identity = 188/197 (95.43%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPISTVQGEEL+KVIGAPAYIECSSKTQQNVKGVFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELRKVIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQ+VCS+L
Sbjct: 181 PKSKKKKKKSQNVCSIL 197

[Close]

BLAST of Sed0003363 vs. NCBI nr
Match: XP_022951334.1 (rac-like GTP-binding protein 5 [Cucurbita moschata] >XP_023002505.1 rac-like GTP-binding protein 5 [Cucurbita maxima] >XP_023538238.1 rac-like GTP-binding protein 5 [Cucurbita pepo subsp. pepo] >KAG6585531.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.0 bits (972), Expect = 2.4e-101
Identity = 188/197 (95.43%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPISTVQGEEL K IGAPAYIECSSKTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQSVCS+L
Sbjct: 181 PKSKKKKKKSQSVCSIL 197

[Close]

BLAST of Sed0003363 vs. NCBI nr
Match: XP_022961886.1 (rac-like GTP-binding protein RHO1 [Cucurbita moschata] >XP_022997632.1 rac-like GTP-binding protein RHO1 [Cucurbita maxima] >XP_023545925.1 rac-like GTP-binding protein RHO1 [Cucurbita pepo subsp. pepo] >KAG6598511.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.3 bits (970), Expect = 4.1e-101
Identity = 188/197 (95.43%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPI+TVQGEEL K IGAPAYIECSSKTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQSVCSVL
Sbjct: 181 PKSKKKKKKSQSVCSVL 197

[Close]

BLAST of Sed0003363 vs. NCBI nr
Match: XP_022144276.1 (rac-like GTP-binding protein RHO1 [Momordica charantia])

HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100
Identity = 186/197 (94.42%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF +HPGAVPI+TVQGEEL+KVIGAPAYIECSSKTQQNVKGVFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFENHPGAVPITTVQGEELRKVIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQ VCSVL
Sbjct: 181 PKSKKKKKKSQGVCSVL 197

[Close]

BLAST of Sed0003363 vs. NCBI nr
Match: KAF3796455.1 (Rac-like GTP-binding protein [Nymphaea thermarum])

HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99
Identity = 182/200 (91.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF+DHPGAVPI+T QGEELKK+IGAPAYIECSSKTQQNVKGVFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 180

Query: 181 PKTKKKK-----SQSVCSVL 196
           PK KKKK      Q VCS+L
Sbjct: 181 PKQKKKKKRKGQKQQVCSIL 200

[Close]

BLAST of Sed0003363 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 9.6e-101
Identity = 179/197 (90.86%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF+DHPGAVPI+T QGEEL+K+IGAPAYIECSSKTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKTKKKKS--QSVCSVL 196
           PKTKKKKS  Q  CS+L
Sbjct: 181 PKTKKKKSKAQKACSIL 197

[Close]

BLAST of Sed0003363 vs. ExPASy Swiss-Prot
Match: Q38902 (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana OX=3702 GN=ARAC1 PE=1 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.1e-100
Identity = 178/197 (90.36%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF+DHPGAVPI+T QGEELKK+IGAPAYIECSSKTQ+NVKGVFD+AI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PKTKKKKS--QSVCSVL 196
           PK KKKKS  Q  CS+L
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Sed0003363 vs. ExPASy Swiss-Prot
Match: Q38912 (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.8e-100
Identity = 175/198 (88.38%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF +HPGAVPIST QGEELKK+IGAPAYIECS+KTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKTKKK---KSQSVCSVL 196
           PK KKK   KSQ  CS+L
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Sed0003363 vs. ExPASy Swiss-Prot
Match: Q9SBJ6 (Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana OX=3702 GN=ARAC6 PE=1 SV=2)

HSP 1 Score: 365.2 bits (936), Expect = 4.8e-100
Identity = 177/197 (89.85%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF+DHPGAVPI+TVQGEELKK+IGAPAYIECSSK+Q+NVKGVFD+AI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180

Query: 181 PKTKKK--KSQSVCSVL 196
           PK KKK  K+Q  CS+L
Sbjct: 181 PKQKKKKNKAQKACSIL 197

[Close]

BLAST of Sed0003363 vs. ExPASy Swiss-Prot
Match: Q38937 (Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana OX=3702 GN=ARAC5 PE=1 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-99
Identity = 176/187 (94.12%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF+DHPGAVPI+T QGEELKK+IG+P YIECSSKTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKTKKKK 188
           PK KKKK
Sbjct: 181 PKQKKKK 187

[Close]

BLAST of Sed0003363 vs. ExPASy TrEMBL
Match: A0A0A0LMJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345950 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 188/197 (95.43%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPISTVQGEEL+KVIGAPAYIECSSKTQQNVKGVFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELRKVIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQ+VCS+L
Sbjct: 181 PKSKKKKKKSQNVCSIL 197

[Close]

BLAST of Sed0003363 vs. ExPASy TrEMBL
Match: A0A1S3BCF2 (rac-like GTP-binding protein 5 OS=Cucumis melo OX=3656 GN=LOC103488398 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 188/197 (95.43%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPISTVQGEEL+KVIGAPAYIECSSKTQQNVKGVFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELRKVIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQ+VCS+L
Sbjct: 181 PKSKKKKKKSQNVCSIL 197

[Close]

BLAST of Sed0003363 vs. ExPASy TrEMBL
Match: A0A6J1KP50 (rac-like GTP-binding protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111496326 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 188/197 (95.43%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPISTVQGEEL K IGAPAYIECSSKTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQSVCS+L
Sbjct: 181 PKSKKKKKKSQSVCSIL 197

[Close]

BLAST of Sed0003363 vs. ExPASy TrEMBL
Match: A0A6J1GID5 (rac-like GTP-binding protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454197 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 188/197 (95.43%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPISTVQGEEL K IGAPAYIECSSKTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQSVCS+L
Sbjct: 181 PKSKKKKKKSQSVCSIL 197

[Close]

BLAST of Sed0003363 vs. ExPASy TrEMBL
Match: A0A6J1K5N0 (rac-like GTP-binding protein RHO1 OS=Cucurbita maxima OX=3661 GN=LOC111492507 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.0e-101
Identity = 188/197 (95.43%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFFVDHPGAVPI+TVQGEEL K IGAPAYIECSSKTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKT--KKKKSQSVCSVL 196
           PK+  KKKKSQSVCSVL
Sbjct: 181 PKSKKKKKKSQSVCSVL 197

[Close]

BLAST of Sed0003363 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 )

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-101
Identity = 178/197 (90.36%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF+DHPGAVPI+T QGEELKK+IGAPAYIECSSKTQ+NVKGVFD+AI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PKTKKKKS--QSVCSVL 196
           PK KKKKS  Q  CS+L
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Sed0003363 vs. TAIR 10
Match: AT2G17800.2 (Arabidopsis RAC-like 1 )

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-101
Identity = 178/197 (90.36%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF+DHPGAVPI+T QGEELKK+IGAPAYIECSSKTQ+NVKGVFD+AI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PKTKKKKS--QSVCSVL 196
           PK KKKKS  Q  CS+L
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Sed0003363 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 )

HSP 1 Score: 365.9 bits (938), Expect = 2.0e-101
Identity = 175/198 (88.38%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF +HPGAVPIST QGEELKK+IGAPAYIECS+KTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKTKKK---KSQSVCSVL 196
           PK KKK   KSQ  CS+L
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Sed0003363 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 )

HSP 1 Score: 365.9 bits (938), Expect = 2.0e-101
Identity = 175/198 (88.38%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF +HPGAVPIST QGEELKK+IGAPAYIECS+KTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKTKKK---KSQSVCSVL 196
           PK KKK   KSQ  CS+L
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Sed0003363 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 )

HSP 1 Score: 365.9 bits (938), Expect = 2.0e-101
Identity = 175/198 (88.38%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDNQFFVDHPGAVPISTVQGEELKKVIGAPAYIECSSKTQQNVKGVFDSAIKVVLQP 180
           DLRDD QFF +HPGAVPIST QGEELKK+IGAPAYIECS+KTQQNVK VFD+AIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKTKKK---KSQSVCSVL 196
           PK KKK   KSQ  CS+L
Sbjct: 181 PKNKKKKKRKSQKGCSIL 198

The following BLAST results are available for this feature:

BLAST of Sed0003363 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143001.1	6.4e-102	95.43	rac-like GTP-binding protein 5 [Cucumis sativus] >XP_008445333.1 PREDICTED: rac-...	[more]
XP_022951334.1	2.4e-101	95.43	rac-like GTP-binding protein 5 [Cucurbita moschata] >XP_023002505.1 rac-like GTP...	[more]
XP_022961886.1	4.1e-101	95.43	rac-like GTP-binding protein RHO1 [Cucurbita moschata] >XP_022997632.1 rac-like ...	[more]
XP_022144276.1	2.7e-100	94.42	rac-like GTP-binding protein RHO1 [Momordica charantia]	[more]
KAF3796455.1	1.0e-99	91.00	Rac-like GTP-binding protein [Nymphaea thermarum]	[more]

BLAST of Sed0003363 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39435	9.6e-101	90.86	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
Q38902	2.1e-100	90.36	Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana OX=3702 GN=ARAC1 PE=1...	[more]
Q38912	2.8e-100	88.38	Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1...	[more]
Q9SBJ6	4.8e-100	89.85	Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana OX=3702 GN=ARAC6 PE=1...	[more]
Q38937	1.1e-99	94.12	Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana OX=3702 GN=ARAC5 PE=1...	[more]

BLAST of Sed0003363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMJ2	3.1e-102	95.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345950 PE=3 SV=1	[more]
A0A1S3BCF2	3.1e-102	95.43	rac-like GTP-binding protein 5 OS=Cucumis melo OX=3656 GN=LOC103488398 PE=3 SV=1	[more]
A0A6J1KP50	1.2e-101	95.43	rac-like GTP-binding protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111496326 PE=3 ...	[more]
A0A6J1GID5	1.2e-101	95.43	rac-like GTP-binding protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454197 PE=...	[more]
A0A6J1K5N0	2.0e-101	95.43	rac-like GTP-binding protein RHO1 OS=Cucurbita maxima OX=3661 GN=LOC111492507 PE...	[more]

BLAST of Sed0003363 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17800.1	1.5e-101	90.36	Arabidopsis RAC-like 1	[more]
AT2G17800.2	1.5e-101	90.36	Arabidopsis RAC-like 1	[more]
AT4G35020.1	2.0e-101	88.38	RAC-like 3	[more]
AT4G35020.2	2.0e-101	88.38	RAC-like 3	[more]
AT4G35020.3	2.0e-101	88.38	RAC-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 7..28 score: 44.74 coord: 47..69 score: 49.3 coord: 30..46 score: 32.14 coord: 109..122 score: 52.36
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..140 e-value: 3.3E-12 score: 42.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..139 e-value: 5.2E-10 score: 26.8
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 1..142
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..144 score: 19.857906
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..144 score: 16.863028
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..142 e-value: 6.3957E-111 score: 309.854
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..143 e-value: 8.9E-73 score: 257.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..127 e-value: 5.5E-43 score: 146.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..144 score: 12.417311
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..143 e-value: 4.8E-56 score: 190.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..127
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..125 e-value: 3.1E-33 score: 112.9
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003363.1	Sed0003363.1	mRNA
Sed0003363.2	Sed0003363.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding