Sed0003311 (gene) Chayote v1

Overview


Name	Sed0003311
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cyclic dof factor 1-like
Location	LG04: 5714826 .. 5716544 (+)
RNA-Seq Expression	Sed0003311
Synteny	Sed0003311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATTTCAAGAAGAAAAAAAAAAAAAAAAACCAATTCCAAGAACAAAAATGGCTGAACTTGAAATTACAGACCCAATAATAAAGCTATTTGGGAAGACAATTGCAGCTTTGCCACTCAACCATGAAGACAAGGATTCTGGTTGCAGATTTGTTCTTCACCAAAAGGTACGAATTTCTCTGCAGTTACTCTGTTTCTTTTCAGACTCTCTATCAATTCAATCTTATTCTTTCTTCAGTGTTTTAAAGTTGGATAATGAGGGTTTCTCTTTCTGGGTTTTCGTTTTTCTATCTGGGTTTTTATTATTTGGTAATGAAATTCAATGCTTGAATCGAATTTCTAGCTATTGTTTTGGGTAATTAGTTCTTTGAAGTTTGATCCTCTATTGCTCTGTTTTAAGATGAATTTTGAATTATCTTGTGCAGGTAACTTTGTGTGAGGAATTGGTATCAGAGAAACCGGGGAATGAACTTGCAAAACAAATAACGGATCAAACGACTTCTGAAATTAGCGAAAACCCATCAATAGAGAAGCAAATTTCATCTCCAAAAGATGCGAAAAATGAAGAACAGAGCGAAACGAGCATGTCCCAAAAAAAACCAGACAAAATCCTGCCTTGTCCTCGATGTAACAGCATGGACACCAAATTCTGTTACTACAACAACTACAATGTCAATCAACCTCGTCATTTCTGCAAGAATTGCCAAAGATACTGGACCTCGGGCGGGACCATGAGGAACGTCCCGGTCGGGGCCGGTCGGCGAAAGAACAAAAGCTCATCCTCCTCTCATTTCCGTCAGTTGATAATCCCCGACCGCGGAATTCACCATCATCAATTTCTCACTTTTGGCCCAAATGAAGATGAAAATTCTACTAAATGTTCAATTACATCTTCCCATTCATCAGAGAAACGAGGTAAAATCACTTCACAGAAATCAGTAATGGAAAATGCTCTGCCTTTTCCACCTCAATTACAGCCATTTCATGGATTTCCATGGCCGTTTTTCCCGGCGGCGGGGATTCCGGTGTATTACCCTGTGCCGCCGCCGTACTGGGGTTGCACAGCGCCGCCGTCTTGGACATTAACAAACCCCAACGGTCAAGATTTGTCGACAAATTCCTCTGTTTTGGGGAAACGTTTGAGAGACGGTGAAAACATCAAACAGAGCAATGGCGAAGTCCAAAAGACATTGAAAATGGATGATCCAAACGAATCGGCAAAGAGCTCAATATTGTCGAAACTTGGAATAAAGAAGGGTAAAGCTTCAGCAAGTTCCATTAATGGCGGTGGACTTTTTGAGTATTTCCAACAAACTAACTCAAAAGGAAAAGATCAAGAAAATGGAACAGAAAATTGCTCGCTTTTGCAGGCAAATCCAGCCGCCTTATCTCGGGCATTGAAATTCCGAGAGATTGCTTGATTTGAAACACCACAACTATACCAACTAAGTTGGTGACGCGTTAGTTATATTGTTTGCTGTGAATAGAGTTCAACACTACGGTCAAGAGTATGAATTTAGAAATCGGTATTTTGCTCTTATTTAATTGATAAGTAGCACCTCTAAGTCAGATTTGTGGCAGGTTAGATTTATTGTTTGATGTTAATCTAGCTCAATAACGGTCGAAGATTCATTCATGTAAATCGGTATTTGTCTTTCATTTATTTGAGTTTAGTACTTCAAATTAGAGTGGGTTATCCTCCACCCCAAACTGTACTTTG

mRNA sequence

GAGATTTCAAGAAGAAAAAAAAAAAAAAAAACCAATTCCAAGAACAAAAATGGCTGAACTTGAAATTACAGACCCAATAATAAAGCTATTTGGGAAGACAATTGCAGCTTTGCCACTCAACCATGAAGACAAGGATTCTGGTTGCAGATTTGTTCTTCACCAAAAGGTAACTTTGTGTGAGGAATTGGTATCAGAGAAACCGGGGAATGAACTTGCAAAACAAATAACGGATCAAACGACTTCTGAAATTAGCGAAAACCCATCAATAGAGAAGCAAATTTCATCTCCAAAAGATGCGAAAAATGAAGAACAGAGCGAAACGAGCATGTCCCAAAAAAAACCAGACAAAATCCTGCCTTGTCCTCGATGTAACAGCATGGACACCAAATTCTGTTACTACAACAACTACAATGTCAATCAACCTCGTCATTTCTGCAAGAATTGCCAAAGATACTGGACCTCGGGCGGGACCATGAGGAACGTCCCGGTCGGGGCCGGTCGGCGAAAGAACAAAAGCTCATCCTCCTCTCATTTCCGTCAGTTGATAATCCCCGACCGCGGAATTCACCATCATCAATTTCTCACTTTTGGCCCAAATGAAGATGAAAATTCTACTAAATGTTCAATTACATCTTCCCATTCATCAGAGAAACGAGGTAAAATCACTTCACAGAAATCAGTAATGGAAAATGCTCTGCCTTTTCCACCTCAATTACAGCCATTTCATGGATTTCCATGGCCGTTTTTCCCGGCGGCGGGGATTCCGGTGTATTACCCTGTGCCGCCGCCGTACTGGGGTTGCACAGCGCCGCCGTCTTGGACATTAACAAACCCCAACGGTCAAGATTTGTCGACAAATTCCTCTGTTTTGGGGAAACGTTTGAGAGACGGTGAAAACATCAAACAGAGCAATGGCGAAGTCCAAAAGACATTGAAAATGGATGATCCAAACGAATCGGCAAAGAGCTCAATATTGTCGAAACTTGGAATAAAGAAGGGTAAAGCTTCAGCAAGTTCCATTAATGGCGGTGGACTTTTTGAGTATTTCCAACAAACTAACTCAAAAGGAAAAGATCAAGAAAATGGAACAGAAAATTGCTCGCTTTTGCAGGCAAATCCAGCCGCCTTATCTCGGGCATTGAAATTCCGAGAGATTGCTTGATTTGAAACACCACAACTATACCAACTAAGTTGGTGACGCGTTAGTTATATTGTTTGCTGTGAATAGAGTTCAACACTACGGTCAAGAGTATGAATTTAGAAATCGGTATTTTGCTCTTATTTAATTGATAAGTAGCACCTCTAAGTCAGATTTGTGGCAGGTTAGATTTATTGTTTGATGTTAATCTAGCTCAATAACGGTCGAAGATTCATTCATGTAAATCGGTATTTGTCTTTCATTTATTTGAGTTTAGTACTTCAAATTAGAGTGGGTTATCCTCCACCCCAAACTGTACTTTG

Coding sequence (CDS)

ATGGCTGAACTTGAAATTACAGACCCAATAATAAAGCTATTTGGGAAGACAATTGCAGCTTTGCCACTCAACCATGAAGACAAGGATTCTGGTTGCAGATTTGTTCTTCACCAAAAGGTAACTTTGTGTGAGGAATTGGTATCAGAGAAACCGGGGAATGAACTTGCAAAACAAATAACGGATCAAACGACTTCTGAAATTAGCGAAAACCCATCAATAGAGAAGCAAATTTCATCTCCAAAAGATGCGAAAAATGAAGAACAGAGCGAAACGAGCATGTCCCAAAAAAAACCAGACAAAATCCTGCCTTGTCCTCGATGTAACAGCATGGACACCAAATTCTGTTACTACAACAACTACAATGTCAATCAACCTCGTCATTTCTGCAAGAATTGCCAAAGATACTGGACCTCGGGCGGGACCATGAGGAACGTCCCGGTCGGGGCCGGTCGGCGAAAGAACAAAAGCTCATCCTCCTCTCATTTCCGTCAGTTGATAATCCCCGACCGCGGAATTCACCATCATCAATTTCTCACTTTTGGCCCAAATGAAGATGAAAATTCTACTAAATGTTCAATTACATCTTCCCATTCATCAGAGAAACGAGGTAAAATCACTTCACAGAAATCAGTAATGGAAAATGCTCTGCCTTTTCCACCTCAATTACAGCCATTTCATGGATTTCCATGGCCGTTTTTCCCGGCGGCGGGGATTCCGGTGTATTACCCTGTGCCGCCGCCGTACTGGGGTTGCACAGCGCCGCCGTCTTGGACATTAACAAACCCCAACGGTCAAGATTTGTCGACAAATTCCTCTGTTTTGGGGAAACGTTTGAGAGACGGTGAAAACATCAAACAGAGCAATGGCGAAGTCCAAAAGACATTGAAAATGGATGATCCAAACGAATCGGCAAAGAGCTCAATATTGTCGAAACTTGGAATAAAGAAGGGTAAAGCTTCAGCAAGTTCCATTAATGGCGGTGGACTTTTTGAGTATTTCCAACAAACTAACTCAAAAGGAAAAGATCAAGAAAATGGAACAGAAAATTGCTCGCTTTTGCAGGCAAATCCAGCCGCCTTATCTCGGGCATTGAAATTCCGAGAGATTGCTTGA

Protein sequence

MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFVLHQKVTLCEELVSEKPGNELAKQITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMSQKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIHHHQFLTFGPNEDENSTKCSITSSHSSEKRGKITSQKSVMENALPFPPQLQPFHGFPWPFFPAAGIPVYYPVPPPYWGCTAPPSWTLTNPNGQDLSTNSSVLGKRLRDGENIKQSNGEVQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPAALSRALKFREIA

Homology

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BLAST of Sed0003311 vs. NCBI nr
Match: XP_038891308.1 (cyclic dof factor 1-like [Benincasa hispida])

HSP 1 Score: 456.1 bits (1172), Expect = 3.0e-124
Identity = 271/437 (62.01%), Postives = 303/437 (69.34%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFV--------LHQKVTLCEELVSEKPG 60
           MAE+EI DPI+KLFGKTI ALPLNH D  S  +F+          +K T CEEL SEK G
Sbjct: 3   MAEVEIRDPILKLFGKTI-ALPLNHLDLASDSKFLSSETTVPKAGEKETSCEELASEKQG 62

Query: 61  NELAKQITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRC 120
           N    QITDQTTS +SENPS E++ISSPK +KNEEQSETS+S      KKPDKILPCPRC
Sbjct: 63  NSSGNQITDQTTSGVSENPSEEREISSPKASKNEEQSETSISPDNKTSKKPDKILPCPRC 122

Query: 121 NSMDTKFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLII 180
           NSMDTKFCY+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNKSSSSSHFRQLII
Sbjct: 123 NSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSSSSHFRQLII 182

Query: 181 PDRGIHHHQ-------FLTFG--------------------PNEDENSTKCSITSSHSSE 240
           PD GIH HQ       FLTF                      N D++S+K SIT+S+SSE
Sbjct: 183 PDGGIHRHQFLGNNGTFLTFASDSSISDSQNCNPSGFLISTENGDDHSSKSSITASNSSE 242

Query: 241 KRGKITSQKSVMENALPFPPQLQPFHGFPW--------PFFPAAGIPVYYPVPPPYWGCT 300
           K  KITSQ+S ++N  PFPPQLQ F G  W        PF P A    YYP   PYWGCT
Sbjct: 243 KGAKITSQQSAVKNVFPFPPQLQSFTGLSWPCSSMAPPPFCPPAFPVSYYPA-LPYWGCT 302

Query: 301 APPSWTLTNPNGQDLSTNSSVLGKRLRDG------------ENIKQSNGE-----VQKTL 360
           APPSWT+  PNGQ+  TNSSVLGK LRDG            E +KQ N E     + KT+
Sbjct: 303 APPSWTVIIPNGQNSFTNSSVLGKHLRDGNMVKSPSNSESEETVKQKNYEETCFWIPKTM 362

Query: 361 KMDDPNESAKSSILSKLGIKKG-KASAS-SINGGGLFEYFQQTNSKGKDQENGTENCSLL 371
           K+DDPNE+AKS+I S LGIK   KA AS +INGG LF   QQ ++KGKDQEN  E+CSLL
Sbjct: 363 KLDDPNEAAKSTIRSTLGIKNNEKAGASTTINGGSLFVSLQQ-SAKGKDQENHNESCSLL 422

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BLAST of Sed0003311 vs. NCBI nr
Match: XP_022151076.1 (cyclic dof factor 1-like [Momordica charantia])

HSP 1 Score: 434.9 bits (1117), Expect = 7.1e-118
Identity = 262/427 (61.36%), Postives = 293/427 (68.62%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFVLH---QKVTLCEELVSEKPGNELAK 60
           MAE+EI DP IKLFGKTI ALPL+H   D      LH   QK T  EEL SEK GN  + 
Sbjct: 1   MAEVEIRDPTIKLFGKTI-ALPLDHLASDCKLVSSLHKHAQKETSSEELASEKQGNGSSN 60

Query: 61  QITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMS----QKKPDKILPCPRCNSMDTK 120
           Q T+QTTS +SENPS+E++ SSPK +K+EEQSETS+S     KKPDKILPCPRCNSMDTK
Sbjct: 61  QTTEQTTSGVSENPSVERENSSPKASKSEEQSETSISPDKTSKKPDKILPCPRCNSMDTK 120

Query: 121 FCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIH 180
           FCY+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNK+S SSHFRQ IIPD GIH
Sbjct: 121 FCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKTSPSSHFRQFIIPDAGIH 180

Query: 181 H-HQ---------------------------FLTFGPNEDENSTKCSITSSHSSEKRG-- 240
           H HQ                           FL  G N D++S+K SIT+S+SSEK G  
Sbjct: 181 HPHQIQFLGNNGAFLNFGSDSSVSDNCNPNGFLIGGENGDDHSSKSSITASNSSEKGGKM 240

Query: 241 KITSQKSVMENALPFPPQLQPFHGFPWPF-------FPAAGIPVYYPVPPPYWGCTAPPS 300
           KITSQ  V++N LPFPPQL    G PWP+       F   G PV Y   PPYWGCT PPS
Sbjct: 241 KITSQPPVVKNILPFPPQLPSITGLPWPYPSAGPPPFCPTGFPVSYYSAPPYWGCTVPPS 300

Query: 301 WTLTNPNGQDLSTNSSVLGKRLRDG--------ENIKQSNGEVQ-----KTLKMDDPNES 360
           WTL N NGQ+  TNSSVLGKR RDG        E +KQ N E Q     KTL++DDPNE+
Sbjct: 301 WTLLNHNGQNSFTNSSVLGKRSRDGTIISNNAEEVVKQRNSEEQCHWIPKTLEVDDPNEA 360

Query: 361 AKSSILSKLGIKKGKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPAALSRA 371
           AKSSI SK       A+AS INGGGLF  FQQ  +KGK +EN  E+CSLLQANPAA SRA
Sbjct: 361 AKSSIWSK------SAAASFINGGGLFAAFQQA-AKGK-EENHIESCSLLQANPAAFSRA 418

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BLAST of Sed0003311 vs. NCBI nr
Match: XP_011655685.1 (cyclic dof factor 1 [Cucumis sativus] >KGN51929.1 hypothetical protein Csa_009446 [Cucumis sativus])

HSP 1 Score: 411.4 bits (1056), Expect = 8.4e-111
Identity = 252/434 (58.06%), Postives = 291/434 (67.05%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRF---VLHQKVTLCEELVSEKPGNELAK 60
           MAE++I DPIIKLFGKTI +LPLNH D  S  +F      +K T CEEL  EK GN    
Sbjct: 1   MAEVDIRDPIIKLFGKTI-SLPLNHLDLPSDSKFPSSETTEKETSCEELGLEKRGNSSGN 60

Query: 61  QITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRCNSMDT 120
           QITDQTTS +SENP  E++ISSPK +KNEEQSETS S      KKPDKILPCPRCNSMDT
Sbjct: 61  QITDQTTSGVSENPLEEREISSPKASKNEEQSETSNSPDNKTSKKPDKILPCPRCNSMDT 120

Query: 121 KFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGI 180
           KFCY+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNK+SSSSHFRQLIIPD G 
Sbjct: 121 KFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSSSHFRQLIIPDGGN 180

Query: 181 HHHQ-------FLTFG--------------------PNEDENSTKCSITSSHSSEKRGKI 240
           H HQ       FLTF                      N D++S+K SIT+S+SSEK  K+
Sbjct: 181 HRHQFLDNNGTFLTFASDSSISNSQSCNPNGFLVNTENGDDHSSKSSITASNSSEKGAKM 240

Query: 241 TSQKSVMENALPFPPQLQPFHGFPWPF---------FPAAGIPVYYPVPPPYWGCTAPPS 300
            SQ+S+ +N  PF PQLQ F G   P+         F   GIPV Y    PYWG  APPS
Sbjct: 241 ASQQSIAKNVFPFLPQLQSFTGLSLPYSSIPPPSAPFYPPGIPVSYYPSQPYWGYLAPPS 300

Query: 301 WTLTNPNGQDLSTNSSVLGKRLRDGENIKQ-SNGE---------------VQKTLKMDDP 360
            TL NPNGQ+ STNS VLGKRLRDG+ +K  SN E               + +T+K+DDP
Sbjct: 301 LTLINPNGQNSSTNSCVLGKRLRDGKLVKSPSNTESEIGKQRNYEELCLGIPRTMKVDDP 360

Query: 361 NESAKSSILSKLGIKK-----GKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQA 370
           NE+AKS I S LGIK      G +++++INGG LF   QQ ++KGK +E   E+ SLLQA
Sbjct: 361 NEAAKSCIWSTLGIKNDKKAGGGSTSTTINGGSLFVSLQQ-STKGK-EETQIESWSLLQA 420

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BLAST of Sed0003311 vs. NCBI nr
Match: XP_022957152.1 (cyclic dof factor 1 [Cucurbita moschata])

HSP 1 Score: 402.9 bits (1034), Expect = 3.0e-108
Identity = 249/405 (61.48%), Postives = 279/405 (68.89%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFV--LHQKVTLCEELVSEKPGNELAKQ 60
           M E+E+ DP IKLFGKTI ALPLNH    S    V    QK    EEL S+K GN  A Q
Sbjct: 1   MGEVEVRDPTIKLFGKTI-ALPLNHGGFVSSESSVPKARQKGISYEELASQKQGNGSANQ 60

Query: 61  ITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRCNSMDTK 120
           IT+Q TSE+SEN S E++ISSP+ +KN EQSETS+S      KKPDKILPCPRCNSMDTK
Sbjct: 61  ITNQATSEVSENQSEEREISSPRASKNGEQSETSISPDNKTSKKPDKILPCPRCNSMDTK 120

Query: 121 FCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIH 180
           FCYYNNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNKSSSSSH  QLIIPD GIH
Sbjct: 121 FCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSSSSHLCQLIIPDGGIH 180

Query: 181 HHQ-------FLTFG------------PNEDENSTKCSITSSHSSEKRGKITSQKSVMEN 240
           HHQ       FLTFG             N D++S+K SIT+S+SS++  KITSQ+S ++N
Sbjct: 181 HHQFLGKNGTFLTFGSDTSIFNSQNCNQNGDDHSSKSSITASNSSDRGDKITSQQSTVKN 240

Query: 241 ALPFPPQLQPFHGF--------PWPFFPAAGIPV-YYPVPPPYWGCTAPPSWTLTNPNGQ 300
            LPF PQLQ F G         P PF+P  G PV YYPV  PYWGCT PPS T+ N N Q
Sbjct: 241 VLPFTPQLQSFTGHSLPYSSMAPPPFYP-PGFPVSYYPV-LPYWGCTNPPSSTVINHNAQ 300

Query: 301 DLSTNSSVLGKRLRDGENIKQSNGEVQKTLKMDDPNESAKSSILSKLGIKKGKASASSIN 360
           +  TN SVLGKR                 LK+DDPNE+AKSSI S LGIK  KA+ASSI 
Sbjct: 301 NSLTNPSVLGKR-----------------LKVDDPNEAAKSSIRSPLGIKHEKAAASSIK 360

Query: 361 GGGLFEYFQQTNSKGKDQENGTENCSLLQANPAALSRALKFREIA 371
           GG LF  FQQ  +KGK + N  E+ SLLQANPAA SRALKF EIA
Sbjct: 361 GGALFASFQQA-AKGK-EVNHIESWSLLQANPAAFSRALKFHEIA 383

[Close]

BLAST of Sed0003311 vs. NCBI nr
Match: XP_008446369.1 (PREDICTED: cyclic dof factor 1 [Cucumis melo] >KAA0034427.1 cyclic dof factor 1 [Cucumis melo var. makuwa] >TYK17707.1 cyclic dof factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 401.4 bits (1030), Expect = 8.7e-108
Identity = 248/431 (57.54%), Postives = 287/431 (66.59%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFVLHQKVTLCEELVSEKPGNELAKQIT 60
           MAE+E+ DPIIKLFGKTI +LP + +   S       +K T CEEL  EK GN    QIT
Sbjct: 1   MAEVEMRDPIIKLFGKTI-SLPSDSKFLSSETT----EKETSCEELGLEKEGNSSGNQIT 60

Query: 61  DQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRCNSMDTKFC 120
           DQTTS +SENP  E++ISSPK +KNEEQSETS S      KKPDKILPCPRCNSMDTKFC
Sbjct: 61  DQTTSGVSENPLEEREISSPKASKNEEQSETSNSPDNKTSKKPDKILPCPRCNSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIHHH 180
           Y+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNK+SSSSHFRQLIIPD GIH H
Sbjct: 121 YFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSSSHFRQLIIPDGGIHPH 180

Query: 181 Q-------FLTFG--------------------PNEDENSTKCSITSSHSSEKRGKITSQ 240
           Q       FLTF                      N D++S+K SIT S+SSEK  K+ SQ
Sbjct: 181 QFLDNNGTFLTFASDSSISNSQSCNPNGFLINTENGDDHSSKSSITVSNSSEKGAKMASQ 240

Query: 241 KSVMENALPFPPQLQPFHGFPWPF---------FPAAGIPVYYPVPPPYWGCTAPPSWTL 300
           +S+ +N  PF PQLQ F G   P+         F   GIPV Y    PYWG  APPS T+
Sbjct: 241 QSIAKNVFPFLPQLQSFTGLSLPYSSITPPSAPFYPPGIPVSYYPSQPYWGYLAPPSLTI 300

Query: 301 TNPNGQDLSTNSSVLGKRLRDG-----------ENIKQSNGE-----VQKTLKMDDPNES 360
            NPN Q+ STNSSVLGKR RDG           E +KQ N E     + KT+K+DDPNE+
Sbjct: 301 INPNSQNSSTNSSVLGKRSRDGKLVKSPSNTESEIVKQKNSEEPSLGIPKTMKVDDPNEA 360

Query: 361 AKSSILSKLGIKK-----GKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPA 370
           AKSSI S LGIK      G +++++INGG LF   Q+ ++KGK +E   E+ SLLQANPA
Sbjct: 361 AKSSIWSTLGIKNDKKAGGGSTSTTINGGSLFVSLQR-STKGK-EETQIESWSLLQANPA 420

[Close]

BLAST of Sed0003311 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-46
Identity = 161/451 (35.70%), Postives = 214/451 (47.45%), Query Frame = 0


Query: 4   LEITDPIIKLFGKTI-------AALPLNHEDKD--SGCRFVLHQKVTLCEELVSEKPGNE 63
           +E  DP IKLFG  I       +A+ +  +++D  SG      +KVT      +    N+
Sbjct: 3   METRDPAIKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSPEKVTPELSDKNNNNCND 62

Query: 64  LAKQITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMSQKKPDKILPCPRCNSMDTKF 123
            +   +   T +  E  S ++  SS     N++ +    + KKP KILPCPRC SM+TKF
Sbjct: 63  NSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKF 122

Query: 124 CYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIP------ 183
           CYYNNYN+NQPRHFCK CQRYWT+GGTMRNVPVGAGRRKNK SSSSH+R + I       
Sbjct: 123 CYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK-SSSSHYRHITISEALEAA 182

Query: 184 --DRGIH-HHQFLTFG-------------------------------------------- 243
             D G+  + + L+FG                                            
Sbjct: 183 RLDPGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLADQRLVARV 242

Query: 244 PNEDENSTKCSITSSHSSEKRGKITSQKSVME-----NALPFPPQLQPFHGFPWPFF--P 303
            N D+ S+  S+T+S++           SV+E     N            G PWP+   P
Sbjct: 243 ENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNNMNGYACIPGVPWPYTWNP 302

Query: 304 AAGIPVYYPVPP------PYWGCTAPPSWTLTNPNGQDLS-TNSSVLGKRLRDGENIKQS 363
           A   P +YP P       PYW     P    ++P  Q  S TNS  LGK  RD  + K+ 
Sbjct: 303 AMPPPGFYPPPGYPMPFYPYWTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGSSKKD 362

Query: 364 NGE----------VQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFEYFQQTN 369
           N            V KTL++DDPNE+AKSSI + LGIK    + +    GG+F+ F    
Sbjct: 363 NETERKQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIK----NEAMCKAGGMFKGFDHKT 422

[Close]

BLAST of Sed0003311 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 6.3e-45
Identity = 130/304 (42.76%), Postives = 173/304 (56.91%), Query Frame = 0


Query: 76  QISSPKDAKNE-----EQSETSMSQKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCK 135
           +++  ++ KN+     +QSE   + KKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK
Sbjct: 23  EVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCK 82

Query: 136 NCQRYWTSGGTMRNVPVGAGRRKNKSSS-SSHFRQLIIPDRGIHHHQFLTFGPNEDENST 195
            CQRYWTSGGTMR+VP+GAGRRKNK++S +SH+  + I +    +   L+F   +D+   
Sbjct: 83  ACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET---NGPVLSFSLGDDQ--- 142

Query: 196 KCSITSSHSSEKRGKITSQKSVMENALPFPPQLQPFHGFPWPFFPAAGIPVYYPVPPPYW 255
           K S     + +   +I +      N       L  F G  WP+      P +YPV  PYW
Sbjct: 143 KVSSNRFGNQKLVARIENNDERSNNNT--SNGLNCFPGVSWPY---TWNPAFYPV-YPYW 202

Query: 256 GCTAPPSWTLTNPNGQDLSTNSSVLGKRLRDGENI---KQSNGE--VQKTLKMDDPNESA 315
                 S   ++P        +S LGK  RD +     KQ NG   V KTL++DDPNE+A
Sbjct: 203 SMPVLSSPVSSSP--------TSTLGKHSRDEDETVKQKQRNGSVLVPKTLRIDDPNEAA 262

Query: 316 KSSILSKLGIKKGKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPAALSRAL 369
           KSSI + LGIK    +    NG G  +  + +N      +  TE   +L ANPAALSR++
Sbjct: 263 KSSIWTTLGIK----NEVMFNGFGSKKEVKLSN------KEETETSLVLCANPAALSRSI 296

[Close]

BLAST of Sed0003311 vs. ExPASy Swiss-Prot
Match: Q9SEZ3 (Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.3e-45
Identity = 138/339 (40.71%), Postives = 186/339 (54.87%), Query Frame = 0


Query: 65  SEISENPSIEKQISSPKDAKN--EEQS-------------ETSMSQKKPDKILPCPRCNS 124
           S+++E P    +ISSP+ +KN  ++QS             E S + KKPDK++PCPRC S
Sbjct: 80  SDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCES 139

Query: 125 MDTKFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKS-SSSSHFRQLIIP 184
            +TKFCYYNNYNVNQPR+FC+NCQRYWT+GG+MRNVPVG+GRRKNK   SS+H+ Q+   
Sbjct: 140 ANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSE 199

Query: 185 DRGIHHH-QFLTFGPNEDENSTKCSITSSHSSEKRGKITSQKSVMENALP---FPPQLQ- 244
           D   ++    L+FG +E    +  + T  H S    KI++     EN       PPQ+  
Sbjct: 200 DCDNNNSGTILSFGSSE----SSVTETGKHQSGDTAKISADSVSQENKSYQGFLPPQVML 259

Query: 245 PFHGFPWPF--FPAAGIPVYYPVPPPYWGCTAPPSWTLTNPNGQDLSTNSSVLGKRLRDG 304
           P +  PWP+   P      +YPV P YWGCT P   T         S  SS LGKR RD 
Sbjct: 260 PNNSSPWPYQWSPTGPNASFYPV-PFYWGCTVPIYPT---------SETSSCLGKRSRDQ 319

Query: 305 E--NIKQSNGE--------VQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFE 364
               I  +N          V ++L+M+   E++KS++ SKL  K  K +         F 
Sbjct: 320 TEGRINDTNTTITTTRARLVSESLRMN--IEASKSAVWSKLPTKPEKKTQG-------FS 379

Query: 365 YFQQTNSKGKDQENG--TENCSLLQANPAALSRALKFRE 369
            F   ++KG    +   +E    LQANPAA+SRA+ FRE
Sbjct: 380 LFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRE 395

[Close]

BLAST of Sed0003311 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 3.5e-43
Identity = 153/396 (38.64%), Postives = 193/396 (48.74%), Query Frame = 0


Query: 44  EELVSEKPGNELAKQITDQTTSEISENPSIEKQISSPKDAK-NEEQSETSMSQ----KKP 103
           EE  SE     L  +  D TT+       I ++  + K AK NEE   T+ SQ    KKP
Sbjct: 79  EEKDSECQEESLRNESNDVTTT----TSGITEKTETTKAAKTNEESGGTACSQEGKLKKP 138

Query: 104 DKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSS 163
           DKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWT+GGTMRNVPVGAGRRKNKS +
Sbjct: 139 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPA 198

Query: 164 SSHFRQLIIPD---------RGIHH---HQFLTFGPN----------------------- 223
           S + R + I             + H      LTFG +                       
Sbjct: 199 SHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSVLCESMASGLNLVEKSLLKTQT 258

Query: 224 ---EDENSTKCSITSSHSSEKRGKITSQKSVMENALPFPPQLQPF--HGFPWPFFPAAGI 283
              E     K ++  + ++E+ G ++    V     P PP   P+  +G  W   P    
Sbjct: 259 VLQEPNEGLKITVPLNQTNEEAGTVSPLPKV--PCFPGPPPTWPYAWNGVSWTILP---- 318

Query: 284 PVYYPVPPPYWGC--TAPPSWT----LTNPNGQDLST-NSSVLGKRLRDGENI------- 343
             +YP PP YW C   +P +W     +  PN    S  NS  LGK  RD EN        
Sbjct: 319 --FYP-PPAYWSCPGVSPGAWNSFTWMPQPNSPSGSNPNSPTLGKHSRD-ENAAEPGTAF 378

Query: 344 --------KQSNGE----VQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFEY 369
                   ++S  E    V KTL++DDP E+AKSSI   LGIKK + +A +         
Sbjct: 379 DETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDE-NADTFGAFRSSTK 438

[Close]

BLAST of Sed0003311 vs. ExPASy Swiss-Prot
Match: Q9LQX4 (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.7e-40
Identity = 139/397 (35.01%), Postives = 198/397 (49.87%), Query Frame = 0


Query: 5   EITDPIIKLFGKTIAALPLNHEDKDSGCRFVLHQKVTLCEELVSEKPGNELAKQITDQTT 64
           ++ D  +KLFG TI   P++H+   S    +     +     +S +P     + +TD T+
Sbjct: 3   QVRDTPVKLFGWTIT--PVSHDPYSSSSHVLPDSSSSSSSSSLSLRPHMMNNQSVTDNTS 62

Query: 65  SEISENPSIE-KQISSPKDAKNEE------QSETSMSQKKPDKILPCPRCNSMDTKFCYY 124
            ++S N + E K+ S   D ++ E      + E +   KKPDKILPCPRCNS DTKFCYY
Sbjct: 63  LKLSSNLNNESKETSENSDDQHSEITTITSEEEKTTELKKPDKILPCPRCNSADTKFCYY 122

Query: 125 NNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIHHHQF 184
           NNYNVNQPRHFC+ CQRYWT+GG+MR VPVG+GRRKNK   SS        D+ +H    
Sbjct: 123 NNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSS--------DQYLH---- 182

Query: 185 LTFGPNEDENSTKCSITSSHSSE----KRGKITSQKSVMENALP-----------FPPQL 244
           +T    ++ NS+   I S  SS+    +R K  S + V  NA P            PPQ 
Sbjct: 183 ITSEDTDNYNSSSTKILSFESSDSLVTERPKHQSNE-VKINAEPVSQEPNNFQGLLPPQA 242

Query: 245 QPFHGFPWPF-FPAAGIPVYYPVPPPYWGCTAPPSWTLTNPNGQDLSTNSSVLGKRLRD- 304
            P    PWP+ +P    P +Y + P YWGC  P   TL           S+ LGKR RD 
Sbjct: 243 SPVSP-PWPYQYPPN--PSFYHM-PVYWGCAIPVWSTL---------DTSTCLGKRTRDE 302

Query: 305 --GENIKQSNGEVQKTLKM-------DDPNESAKSSILSKLGIKKGKASASSINGGGLFE 364
              E +K+S    ++T  +       ++ + +  + +   + + + K    S    G   
Sbjct: 303 TSHETVKESKNAFERTSLLLESQSIKNETSMATNNHVWYPVPMTREKTQEFSFFSNG--- 362

Query: 365 YFQQTNSKGKDQENGTENCSLLQANPAALSRALKFRE 369
                 +K  +     E    LQANPAA++R++ FRE
Sbjct: 363 ----AETKSSNNRFVPETYLNLQANPAAMARSMNFRE 364

[Close]

BLAST of Sed0003311 vs. ExPASy TrEMBL
Match: A0A6J1DDH1 (cyclic dof factor 1-like OS=Momordica charantia OX=3673 GN=LOC111019099 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 3.4e-118
Identity = 262/427 (61.36%), Postives = 293/427 (68.62%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFVLH---QKVTLCEELVSEKPGNELAK 60
           MAE+EI DP IKLFGKTI ALPL+H   D      LH   QK T  EEL SEK GN  + 
Sbjct: 1   MAEVEIRDPTIKLFGKTI-ALPLDHLASDCKLVSSLHKHAQKETSSEELASEKQGNGSSN 60

Query: 61  QITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMS----QKKPDKILPCPRCNSMDTK 120
           Q T+QTTS +SENPS+E++ SSPK +K+EEQSETS+S     KKPDKILPCPRCNSMDTK
Sbjct: 61  QTTEQTTSGVSENPSVERENSSPKASKSEEQSETSISPDKTSKKPDKILPCPRCNSMDTK 120

Query: 121 FCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIH 180
           FCY+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNK+S SSHFRQ IIPD GIH
Sbjct: 121 FCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKTSPSSHFRQFIIPDAGIH 180

Query: 181 H-HQ---------------------------FLTFGPNEDENSTKCSITSSHSSEKRG-- 240
           H HQ                           FL  G N D++S+K SIT+S+SSEK G  
Sbjct: 181 HPHQIQFLGNNGAFLNFGSDSSVSDNCNPNGFLIGGENGDDHSSKSSITASNSSEKGGKM 240

Query: 241 KITSQKSVMENALPFPPQLQPFHGFPWPF-------FPAAGIPVYYPVPPPYWGCTAPPS 300
           KITSQ  V++N LPFPPQL    G PWP+       F   G PV Y   PPYWGCT PPS
Sbjct: 241 KITSQPPVVKNILPFPPQLPSITGLPWPYPSAGPPPFCPTGFPVSYYSAPPYWGCTVPPS 300

Query: 301 WTLTNPNGQDLSTNSSVLGKRLRDG--------ENIKQSNGEVQ-----KTLKMDDPNES 360
           WTL N NGQ+  TNSSVLGKR RDG        E +KQ N E Q     KTL++DDPNE+
Sbjct: 301 WTLLNHNGQNSFTNSSVLGKRSRDGTIISNNAEEVVKQRNSEEQCHWIPKTLEVDDPNEA 360

Query: 361 AKSSILSKLGIKKGKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPAALSRA 371
           AKSSI SK       A+AS INGGGLF  FQQ  +KGK +EN  E+CSLLQANPAA SRA
Sbjct: 361 AKSSIWSK------SAAASFINGGGLFAAFQQA-AKGK-EENHIESCSLLQANPAAFSRA 418

[Close]

BLAST of Sed0003311 vs. ExPASy TrEMBL
Match: A0A0A0KSR0 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605720 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 4.0e-111
Identity = 252/434 (58.06%), Postives = 291/434 (67.05%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRF---VLHQKVTLCEELVSEKPGNELAK 60
           MAE++I DPIIKLFGKTI +LPLNH D  S  +F      +K T CEEL  EK GN    
Sbjct: 1   MAEVDIRDPIIKLFGKTI-SLPLNHLDLPSDSKFPSSETTEKETSCEELGLEKRGNSSGN 60

Query: 61  QITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRCNSMDT 120
           QITDQTTS +SENP  E++ISSPK +KNEEQSETS S      KKPDKILPCPRCNSMDT
Sbjct: 61  QITDQTTSGVSENPLEEREISSPKASKNEEQSETSNSPDNKTSKKPDKILPCPRCNSMDT 120

Query: 121 KFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGI 180
           KFCY+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNK+SSSSHFRQLIIPD G 
Sbjct: 121 KFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSSSHFRQLIIPDGGN 180

Query: 181 HHHQ-------FLTFG--------------------PNEDENSTKCSITSSHSSEKRGKI 240
           H HQ       FLTF                      N D++S+K SIT+S+SSEK  K+
Sbjct: 181 HRHQFLDNNGTFLTFASDSSISNSQSCNPNGFLVNTENGDDHSSKSSITASNSSEKGAKM 240

Query: 241 TSQKSVMENALPFPPQLQPFHGFPWPF---------FPAAGIPVYYPVPPPYWGCTAPPS 300
            SQ+S+ +N  PF PQLQ F G   P+         F   GIPV Y    PYWG  APPS
Sbjct: 241 ASQQSIAKNVFPFLPQLQSFTGLSLPYSSIPPPSAPFYPPGIPVSYYPSQPYWGYLAPPS 300

Query: 301 WTLTNPNGQDLSTNSSVLGKRLRDGENIKQ-SNGE---------------VQKTLKMDDP 360
            TL NPNGQ+ STNS VLGKRLRDG+ +K  SN E               + +T+K+DDP
Sbjct: 301 LTLINPNGQNSSTNSCVLGKRLRDGKLVKSPSNTESEIGKQRNYEELCLGIPRTMKVDDP 360

Query: 361 NESAKSSILSKLGIKK-----GKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQA 370
           NE+AKS I S LGIK      G +++++INGG LF   QQ ++KGK +E   E+ SLLQA
Sbjct: 361 NEAAKSCIWSTLGIKNDKKAGGGSTSTTINGGSLFVSLQQ-STKGK-EETQIESWSLLQA 420

[Close]

BLAST of Sed0003311 vs. ExPASy TrEMBL
Match: A0A6J1GYC9 (cyclic dof factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111458624 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.4e-108
Identity = 249/405 (61.48%), Postives = 279/405 (68.89%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFV--LHQKVTLCEELVSEKPGNELAKQ 60
           M E+E+ DP IKLFGKTI ALPLNH    S    V    QK    EEL S+K GN  A Q
Sbjct: 1   MGEVEVRDPTIKLFGKTI-ALPLNHGGFVSSESSVPKARQKGISYEELASQKQGNGSANQ 60

Query: 61  ITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRCNSMDTK 120
           IT+Q TSE+SEN S E++ISSP+ +KN EQSETS+S      KKPDKILPCPRCNSMDTK
Sbjct: 61  ITNQATSEVSENQSEEREISSPRASKNGEQSETSISPDNKTSKKPDKILPCPRCNSMDTK 120

Query: 121 FCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIH 180
           FCYYNNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNKSSSSSH  QLIIPD GIH
Sbjct: 121 FCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSSSSHLCQLIIPDGGIH 180

Query: 181 HHQ-------FLTFG------------PNEDENSTKCSITSSHSSEKRGKITSQKSVMEN 240
           HHQ       FLTFG             N D++S+K SIT+S+SS++  KITSQ+S ++N
Sbjct: 181 HHQFLGKNGTFLTFGSDTSIFNSQNCNQNGDDHSSKSSITASNSSDRGDKITSQQSTVKN 240

Query: 241 ALPFPPQLQPFHGF--------PWPFFPAAGIPV-YYPVPPPYWGCTAPPSWTLTNPNGQ 300
            LPF PQLQ F G         P PF+P  G PV YYPV  PYWGCT PPS T+ N N Q
Sbjct: 241 VLPFTPQLQSFTGHSLPYSSMAPPPFYP-PGFPVSYYPV-LPYWGCTNPPSSTVINHNAQ 300

Query: 301 DLSTNSSVLGKRLRDGENIKQSNGEVQKTLKMDDPNESAKSSILSKLGIKKGKASASSIN 360
           +  TN SVLGKR                 LK+DDPNE+AKSSI S LGIK  KA+ASSI 
Sbjct: 301 NSLTNPSVLGKR-----------------LKVDDPNEAAKSSIRSPLGIKHEKAAASSIK 360

Query: 361 GGGLFEYFQQTNSKGKDQENGTENCSLLQANPAALSRALKFREIA 371
           GG LF  FQQ  +KGK + N  E+ SLLQANPAA SRALKF EIA
Sbjct: 361 GGALFASFQQA-AKGK-EVNHIESWSLLQANPAAFSRALKFHEIA 383

[Close]

BLAST of Sed0003311 vs. ExPASy TrEMBL
Match: A0A5D3D1A8 (Cyclic dof factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00350 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 4.2e-108
Identity = 248/431 (57.54%), Postives = 287/431 (66.59%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFVLHQKVTLCEELVSEKPGNELAKQIT 60
           MAE+E+ DPIIKLFGKTI +LP + +   S       +K T CEEL  EK GN    QIT
Sbjct: 1   MAEVEMRDPIIKLFGKTI-SLPSDSKFLSSETT----EKETSCEELGLEKEGNSSGNQIT 60

Query: 61  DQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRCNSMDTKFC 120
           DQTTS +SENP  E++ISSPK +KNEEQSETS S      KKPDKILPCPRCNSMDTKFC
Sbjct: 61  DQTTSGVSENPLEEREISSPKASKNEEQSETSNSPDNKTSKKPDKILPCPRCNSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIHHH 180
           Y+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNK+SSSSHFRQLIIPD GIH H
Sbjct: 121 YFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSSSHFRQLIIPDGGIHPH 180

Query: 181 Q-------FLTFG--------------------PNEDENSTKCSITSSHSSEKRGKITSQ 240
           Q       FLTF                      N D++S+K SIT S+SSEK  K+ SQ
Sbjct: 181 QFLDNNGTFLTFASDSSISNSQSCNPNGFLINTENGDDHSSKSSITVSNSSEKGAKMASQ 240

Query: 241 KSVMENALPFPPQLQPFHGFPWPF---------FPAAGIPVYYPVPPPYWGCTAPPSWTL 300
           +S+ +N  PF PQLQ F G   P+         F   GIPV Y    PYWG  APPS T+
Sbjct: 241 QSIAKNVFPFLPQLQSFTGLSLPYSSITPPSAPFYPPGIPVSYYPSQPYWGYLAPPSLTI 300

Query: 301 TNPNGQDLSTNSSVLGKRLRDG-----------ENIKQSNGE-----VQKTLKMDDPNES 360
            NPN Q+ STNSSVLGKR RDG           E +KQ N E     + KT+K+DDPNE+
Sbjct: 301 INPNSQNSSTNSSVLGKRSRDGKLVKSPSNTESEIVKQKNSEEPSLGIPKTMKVDDPNEA 360

Query: 361 AKSSILSKLGIKK-----GKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPA 370
           AKSSI S LGIK      G +++++INGG LF   Q+ ++KGK +E   E+ SLLQANPA
Sbjct: 361 AKSSIWSTLGIKNDKKAGGGSTSTTINGGSLFVSLQR-STKGK-EETQIESWSLLQANPA 420

[Close]

BLAST of Sed0003311 vs. ExPASy TrEMBL
Match: A0A1S3BEW8 (cyclic dof factor 1 OS=Cucumis melo OX=3656 GN=LOC103489130 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 4.2e-108
Identity = 248/431 (57.54%), Postives = 287/431 (66.59%), Query Frame = 0


Query: 1   MAELEITDPIIKLFGKTIAALPLNHEDKDSGCRFVLHQKVTLCEELVSEKPGNELAKQIT 60
           MAE+E+ DPIIKLFGKTI +LP + +   S       +K T CEEL  EK GN    QIT
Sbjct: 1   MAEVEMRDPIIKLFGKTI-SLPSDSKFLSSETT----EKETSCEELGLEKEGNSSGNQIT 60

Query: 61  DQTTSEISENPSIEKQISSPKDAKNEEQSETSMS-----QKKPDKILPCPRCNSMDTKFC 120
           DQTTS +SENP  E++ISSPK +KNEEQSETS S      KKPDKILPCPRCNSMDTKFC
Sbjct: 61  DQTTSGVSENPLEEREISSPKASKNEEQSETSNSPDNKTSKKPDKILPCPRCNSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIPDRGIHHH 180
           Y+NNYNVNQPRHFCKNCQRYWT+GGTMRNVPVGAGRRKNK+SSSSHFRQLIIPD GIH H
Sbjct: 121 YFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSSSHFRQLIIPDGGIHPH 180

Query: 181 Q-------FLTFG--------------------PNEDENSTKCSITSSHSSEKRGKITSQ 240
           Q       FLTF                      N D++S+K SIT S+SSEK  K+ SQ
Sbjct: 181 QFLDNNGTFLTFASDSSISNSQSCNPNGFLINTENGDDHSSKSSITVSNSSEKGAKMASQ 240

Query: 241 KSVMENALPFPPQLQPFHGFPWPF---------FPAAGIPVYYPVPPPYWGCTAPPSWTL 300
           +S+ +N  PF PQLQ F G   P+         F   GIPV Y    PYWG  APPS T+
Sbjct: 241 QSIAKNVFPFLPQLQSFTGLSLPYSSITPPSAPFYPPGIPVSYYPSQPYWGYLAPPSLTI 300

Query: 301 TNPNGQDLSTNSSVLGKRLRDG-----------ENIKQSNGE-----VQKTLKMDDPNES 360
            NPN Q+ STNSSVLGKR RDG           E +KQ N E     + KT+K+DDPNE+
Sbjct: 301 INPNSQNSSTNSSVLGKRSRDGKLVKSPSNTESEIVKQKNSEEPSLGIPKTMKVDDPNEA 360

Query: 361 AKSSILSKLGIKK-----GKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPA 370
           AKSSI S LGIK      G +++++INGG LF   Q+ ++KGK +E   E+ SLLQANPA
Sbjct: 361 AKSSIWSTLGIKNDKKAGGGSTSTTINGGSLFVSLQR-STKGK-EETQIESWSLLQANPA 420

[Close]

BLAST of Sed0003311 vs. TAIR 10
Match: AT3G47500.1 (cycling DOF factor 3 )

HSP 1 Score: 186.8 bits (473), Expect = 3.1e-47
Identity = 161/451 (35.70%), Postives = 214/451 (47.45%), Query Frame = 0


Query: 4   LEITDPIIKLFGKTI-------AALPLNHEDKD--SGCRFVLHQKVTLCEELVSEKPGNE 63
           +E  DP IKLFG  I       +A+ +  +++D  SG      +KVT      +    N+
Sbjct: 3   METRDPAIKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSPEKVTPELSDKNNNNCND 62

Query: 64  LAKQITDQTTSEISENPSIEKQISSPKDAKNEEQSETSMSQKKPDKILPCPRCNSMDTKF 123
            +   +   T +  E  S ++  SS     N++ +    + KKP KILPCPRC SM+TKF
Sbjct: 63  NSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKF 122

Query: 124 CYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSSSSHFRQLIIP------ 183
           CYYNNYN+NQPRHFCK CQRYWT+GGTMRNVPVGAGRRKNK SSSSH+R + I       
Sbjct: 123 CYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK-SSSSHYRHITISEALEAA 182

Query: 184 --DRGIH-HHQFLTFG-------------------------------------------- 243
             D G+  + + L+FG                                            
Sbjct: 183 RLDPGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLADQRLVARV 242

Query: 244 PNEDENSTKCSITSSHSSEKRGKITSQKSVME-----NALPFPPQLQPFHGFPWPFF--P 303
            N D+ S+  S+T+S++           SV+E     N            G PWP+   P
Sbjct: 243 ENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNNMNGYACIPGVPWPYTWNP 302

Query: 304 AAGIPVYYPVPP------PYWGCTAPPSWTLTNPNGQDLS-TNSSVLGKRLRDGENIKQS 363
           A   P +YP P       PYW     P    ++P  Q  S TNS  LGK  RD  + K+ 
Sbjct: 303 AMPPPGFYPPPGYPMPFYPYWTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGSSKKD 362

Query: 364 NGE----------VQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFEYFQQTN 369
           N            V KTL++DDPNE+AKSSI + LGIK    + +    GG+F+ F    
Sbjct: 363 NETERKQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIK----NEAMCKAGGMFKGFDHKT 422

[Close]

BLAST of Sed0003311 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 183.0 bits (463), Expect = 4.5e-46
Identity = 130/304 (42.76%), Postives = 173/304 (56.91%), Query Frame = 0


Query: 76  QISSPKDAKNE-----EQSETSMSQKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCK 135
           +++  ++ KN+     +QSE   + KKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK
Sbjct: 23  EVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCK 82

Query: 136 NCQRYWTSGGTMRNVPVGAGRRKNKSSS-SSHFRQLIIPDRGIHHHQFLTFGPNEDENST 195
            CQRYWTSGGTMR+VP+GAGRRKNK++S +SH+  + I +    +   L+F   +D+   
Sbjct: 83  ACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET---NGPVLSFSLGDDQ--- 142

Query: 196 KCSITSSHSSEKRGKITSQKSVMENALPFPPQLQPFHGFPWPFFPAAGIPVYYPVPPPYW 255
           K S     + +   +I +      N       L  F G  WP+      P +YPV  PYW
Sbjct: 143 KVSSNRFGNQKLVARIENNDERSNNNT--SNGLNCFPGVSWPY---TWNPAFYPV-YPYW 202

Query: 256 GCTAPPSWTLTNPNGQDLSTNSSVLGKRLRDGENI---KQSNGE--VQKTLKMDDPNESA 315
                 S   ++P        +S LGK  RD +     KQ NG   V KTL++DDPNE+A
Sbjct: 203 SMPVLSSPVSSSP--------TSTLGKHSRDEDETVKQKQRNGSVLVPKTLRIDDPNEAA 262

Query: 316 KSSILSKLGIKKGKASASSINGGGLFEYFQQTNSKGKDQENGTENCSLLQANPAALSRAL 369
           KSSI + LGIK    +    NG G  +  + +N      +  TE   +L ANPAALSR++
Sbjct: 263 KSSIWTTLGIK----NEVMFNGFGSKKEVKLSN------KEETETSLVLCANPAALSRSI 296

[Close]

BLAST of Sed0003311 vs. TAIR 10
Match: AT1G69570.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 182.6 bits (462), Expect = 5.9e-46
Identity = 138/339 (40.71%), Postives = 186/339 (54.87%), Query Frame = 0


Query: 65  SEISENPSIEKQISSPKDAKN--EEQS-------------ETSMSQKKPDKILPCPRCNS 124
           S+++E P    +ISSP+ +KN  ++QS             E S + KKPDK++PCPRC S
Sbjct: 80  SDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCES 139

Query: 125 MDTKFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKS-SSSSHFRQLIIP 184
            +TKFCYYNNYNVNQPR+FC+NCQRYWT+GG+MRNVPVG+GRRKNK   SS+H+ Q+   
Sbjct: 140 ANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSE 199

Query: 185 DRGIHHH-QFLTFGPNEDENSTKCSITSSHSSEKRGKITSQKSVMENALP---FPPQLQ- 244
           D   ++    L+FG +E    +  + T  H S    KI++     EN       PPQ+  
Sbjct: 200 DCDNNNSGTILSFGSSE----SSVTETGKHQSGDTAKISADSVSQENKSYQGFLPPQVML 259

Query: 245 PFHGFPWPF--FPAAGIPVYYPVPPPYWGCTAPPSWTLTNPNGQDLSTNSSVLGKRLRDG 304
           P +  PWP+   P      +YPV P YWGCT P   T         S  SS LGKR RD 
Sbjct: 260 PNNSSPWPYQWSPTGPNASFYPV-PFYWGCTVPIYPT---------SETSSCLGKRSRDQ 319

Query: 305 E--NIKQSNGE--------VQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFE 364
               I  +N          V ++L+M+   E++KS++ SKL  K  K +         F 
Sbjct: 320 TEGRINDTNTTITTTRARLVSESLRMN--IEASKSAVWSKLPTKPEKKTQG-------FS 379

Query: 365 YFQQTNSKGKDQENG--TENCSLLQANPAALSRALKFRE 369
            F   ++KG    +   +E    LQANPAA+SRA+ FRE
Sbjct: 380 LFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRE 395

[Close]

BLAST of Sed0003311 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-44
Identity = 153/396 (38.64%), Postives = 193/396 (48.74%), Query Frame = 0


Query: 44  EELVSEKPGNELAKQITDQTTSEISENPSIEKQISSPKDAK-NEEQSETSMSQ----KKP 103
           EE  SE     L  +  D TT+       I ++  + K AK NEE   T+ SQ    KKP
Sbjct: 79  EEKDSECQEESLRNESNDVTTT----TSGITEKTETTKAAKTNEESGGTACSQEGKLKKP 138

Query: 104 DKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSS 163
           DKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWT+GGTMRNVPVGAGRRKNKS +
Sbjct: 139 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPA 198

Query: 164 SSHFRQLIIPD---------RGIHH---HQFLTFGPN----------------------- 223
           S + R + I             + H      LTFG +                       
Sbjct: 199 SHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSVLCESMASGLNLVEKSLLKTQT 258

Query: 224 ---EDENSTKCSITSSHSSEKRGKITSQKSVMENALPFPPQLQPF--HGFPWPFFPAAGI 283
              E     K ++  + ++E+ G ++    V     P PP   P+  +G  W   P    
Sbjct: 259 VLQEPNEGLKITVPLNQTNEEAGTVSPLPKV--PCFPGPPPTWPYAWNGVSWTILP---- 318

Query: 284 PVYYPVPPPYWGC--TAPPSWT----LTNPNGQDLST-NSSVLGKRLRDGENI------- 343
             +YP PP YW C   +P +W     +  PN    S  NS  LGK  RD EN        
Sbjct: 319 --FYP-PPAYWSCPGVSPGAWNSFTWMPQPNSPSGSNPNSPTLGKHSRD-ENAAEPGTAF 378

Query: 344 --------KQSNGE----VQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFEY 369
                   ++S  E    V KTL++DDP E+AKSSI   LGIKK + +A +         
Sbjct: 379 DETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDE-NADTFGAFRSSTK 438

[Close]

BLAST of Sed0003311 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-44
Identity = 153/396 (38.64%), Postives = 193/396 (48.74%), Query Frame = 0


Query: 44  EELVSEKPGNELAKQITDQTTSEISENPSIEKQISSPKDAK-NEEQSETSMSQ----KKP 103
           EE  SE     L  +  D TT+       I ++  + K AK NEE   T+ SQ    KKP
Sbjct: 79  EEKDSECQEESLRNESNDVTTT----TSGITEKTETTKAAKTNEESGGTACSQEGKLKKP 138

Query: 104 DKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTSGGTMRNVPVGAGRRKNKSSS 163
           DKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWT+GGTMRNVPVGAGRRKNKS +
Sbjct: 139 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPA 198

Query: 164 SSHFRQLIIPD---------RGIHH---HQFLTFGPN----------------------- 223
           S + R + I             + H      LTFG +                       
Sbjct: 199 SHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSVLCESMASGLNLVEKSLLKTQT 258

Query: 224 ---EDENSTKCSITSSHSSEKRGKITSQKSVMENALPFPPQLQPF--HGFPWPFFPAAGI 283
              E     K ++  + ++E+ G ++    V     P PP   P+  +G  W   P    
Sbjct: 259 VLQEPNEGLKITVPLNQTNEEAGTVSPLPKV--PCFPGPPPTWPYAWNGVSWTILP---- 318

Query: 284 PVYYPVPPPYWGC--TAPPSWT----LTNPNGQDLST-NSSVLGKRLRDGENI------- 343
             +YP PP YW C   +P +W     +  PN    S  NS  LGK  RD EN        
Sbjct: 319 --FYP-PPAYWSCPGVSPGAWNSFTWMPQPNSPSGSNPNSPTLGKHSRD-ENAAEPGTAF 378

Query: 344 --------KQSNGE----VQKTLKMDDPNESAKSSILSKLGIKKGKASASSINGGGLFEY 369
                   ++S  E    V KTL++DDP E+AKSSI   LGIKK + +A +         
Sbjct: 379 DETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDE-NADTFGAFRSSTK 438

The following BLAST results are available for this feature:

BLAST of Sed0003311 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891308.1	3.0e-124	62.01	cyclic dof factor 1-like [Benincasa hispida]	[more]
XP_022151076.1	7.1e-118	61.36	cyclic dof factor 1-like [Momordica charantia]	[more]
XP_011655685.1	8.4e-111	58.06	cyclic dof factor 1 [Cucumis sativus] >KGN51929.1 hypothetical protein Csa_00944...	[more]
XP_022957152.1	3.0e-108	61.48	cyclic dof factor 1 [Cucurbita moschata]	[more]
XP_008446369.1	8.7e-108	57.54	PREDICTED: cyclic dof factor 1 [Cucumis melo] >KAA0034427.1 cyclic dof factor 1 ...	[more]

BLAST of Sed0003311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFV3	4.4e-46	35.70	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]
Q8W1E3	6.3e-45	42.76	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q9SEZ3	8.3e-45	40.71	Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1	[more]
Q93ZL5	3.5e-43	38.64	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q9LQX4	4.7e-40	35.01	Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV...	[more]

BLAST of Sed0003311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDH1	3.4e-118	61.36	cyclic dof factor 1-like OS=Momordica charantia OX=3673 GN=LOC111019099 PE=4 SV=...	[more]
A0A0A0KSR0	4.0e-111	58.06	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605720 PE...	[more]
A0A6J1GYC9	1.4e-108	61.48	cyclic dof factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111458624 PE=4 SV=1	[more]
A0A5D3D1A8	4.2e-108	57.54	Cyclic dof factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932...	[more]
A0A1S3BEW8	4.2e-108	57.54	cyclic dof factor 1 OS=Cucumis melo OX=3656 GN=LOC103489130 PE=4 SV=1	[more]

BLAST of Sed0003311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47500.1	3.1e-47	35.70	cycling DOF factor 3	[more]
AT5G62430.1	4.5e-46	42.76	cycling DOF factor 1	[more]
AT1G69570.1	5.9e-46	40.71	Dof-type zinc finger DNA-binding family protein	[more]
AT5G39660.1	2.5e-44	38.64	cycling DOF factor 2	[more]
AT5G39660.2	2.5e-44	38.64	cycling DOF factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 99..156 e-value: 1.8E-32 score: 111.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 104..140
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 102..156 score: 28.872591
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..78
None	No IPR available	PANTHER	PTHR31089:SF45	DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN	coord: 5..170 coord: 184..368
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 184..368 coord: 5..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003311.1	Sed0003311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding