Sed0003295 (gene) Chayote v1

Overview


Name	Sed0003295
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein 3-like
Location	LG11: 27405509 .. 27406314 (+)
RNA-Seq Expression	Sed0003295
Synteny	Sed0003295

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTAAATACTCAATTTATTTAAGAAAAAAAAAAAAAAAACCATTTTTTTCTCTCTTCATCTCTCATTTCACAACAAACAAAAAAGGCTTCAATTTTTCATCAATGGAGATGTCAACCGTCGAAACCCCACAAAACTCCGGCGAAAAAGACGACGGCGATAATCATCTCCGCCGTGGGATGCCGGCGGAGGAGCTGAATCTCGTCGGAGATTTGAAAATGGGTTCGTCGGAGCCGAGGGTATTTTCATGTAATTTCTGTCAAAGGAAATTTTATAGTTCTCAAGCACTTGGAGGCCATCAAAATGCCCATAAAAGAGAGAGAACGTTGGCGAAAAGAGGCGGTCAACGGCTGCCGGCGTACGGCGTCTACCACCCCTACGCGGCGGCGGGGCCGTTTTTTCAGTTTCGCGGTGGTCCCAACAGGTCTCTTGGAATTCAGGTTCACGCGCTCGGACATAAGCCGTCTCACCACGCGCCGGTTTCTTCTCTCGGGTTTGGGATCCCCTACGGCCGGTCCTACGGTTGGTCCAGAATCCCTATCCATCAGCAGCCTGGGATTGGTAAGCTCCCGCTGATCAACGGTGGCCCTTCGATTAATCGAACGGATGTAACTGTGCCGCGTGGCTGCAGCAGCGTGGGTAGGTTCGTGTTCGACGTGGCGCGATCAACGGCGGCGGATGGCGGCGTTTGTATCGACGGTCAACAAGACGAGACCCACAAAGTATTGGACTTGTCACTCAAGCTGTAGTTAAAAAACACACAATTTTTCTCTCTACTTTAGAACTATAAAAATCTTCAATCTAAG

mRNA sequence

CCATTAAATACTCAATTTATTTAAGAAAAAAAAAAAAAAAACCATTTTTTTCTCTCTTCATCTCTCATTTCACAACAAACAAAAAAGGCTTCAATTTTTCATCAATGGAGATGTCAACCGTCGAAACCCCACAAAACTCCGGCGAAAAAGACGACGGCGATAATCATCTCCGCCGTGGGATGCCGGCGGAGGAGCTGAATCTCGTCGGAGATTTGAAAATGGGTTCGTCGGAGCCGAGGGTATTTTCATGTAATTTCTGTCAAAGGAAATTTTATAGTTCTCAAGCACTTGGAGGCCATCAAAATGCCCATAAAAGAGAGAGAACGTTGGCGAAAAGAGGCGGTCAACGGCTGCCGGCGTACGGCGTCTACCACCCCTACGCGGCGGCGGGGCCGTTTTTTCAGTTTCGCGGTGGTCCCAACAGGTCTCTTGGAATTCAGGTTCACGCGCTCGGACATAAGCCGTCTCACCACGCGCCGGTTTCTTCTCTCGGGTTTGGGATCCCCTACGGCCGGTCCTACGGTTGGTCCAGAATCCCTATCCATCAGCAGCCTGGGATTGGTAAGCTCCCGCTGATCAACGGTGGCCCTTCGATTAATCGAACGGATGTAACTGTGCCGCGTGGCTGCAGCAGCGTGGGTAGGTTCGTGTTCGACGTGGCGCGATCAACGGCGGCGGATGGCGGCGTTTGTATCGACGGTCAACAAGACGAGACCCACAAAGTATTGGACTTGTCACTCAAGCTGTAGTTAAAAAACACACAATTTTTCTCTCTACTTTAGAACTATAAAAATCTTCAATCTAAG

Coding sequence (CDS)

ATGGAGATGTCAACCGTCGAAACCCCACAAAACTCCGGCGAAAAAGACGACGGCGATAATCATCTCCGCCGTGGGATGCCGGCGGAGGAGCTGAATCTCGTCGGAGATTTGAAAATGGGTTCGTCGGAGCCGAGGGTATTTTCATGTAATTTCTGTCAAAGGAAATTTTATAGTTCTCAAGCACTTGGAGGCCATCAAAATGCCCATAAAAGAGAGAGAACGTTGGCGAAAAGAGGCGGTCAACGGCTGCCGGCGTACGGCGTCTACCACCCCTACGCGGCGGCGGGGCCGTTTTTTCAGTTTCGCGGTGGTCCCAACAGGTCTCTTGGAATTCAGGTTCACGCGCTCGGACATAAGCCGTCTCACCACGCGCCGGTTTCTTCTCTCGGGTTTGGGATCCCCTACGGCCGGTCCTACGGTTGGTCCAGAATCCCTATCCATCAGCAGCCTGGGATTGGTAAGCTCCCGCTGATCAACGGTGGCCCTTCGATTAATCGAACGGATGTAACTGTGCCGCGTGGCTGCAGCAGCGTGGGTAGGTTCGTGTTCGACGTGGCGCGATCAACGGCGGCGGATGGCGGCGTTTGTATCGACGGTCAACAAGACGAGACCCACAAAGTATTGGACTTGTCACTCAAGCTGTAG

Protein sequence

MEMSTVETPQNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPYAAAGPFFQFRGGPNRSLGIQVHALGHKPSHHAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKLPLINGGPSINRTDVTVPRGCSSVGRFVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL

Homology

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BLAST of Sed0003295 vs. NCBI nr
Match: XP_038886144.1 (zinc finger protein 3-like [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 5.6e-75
Identity = 157/226 (69.47%), Postives = 169/226 (74.78%), Query Frame = 0


Query: 1   MEMSTVETP---------QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNF 60
           ME ST   P         QN  E ++  +HLR G+PAEELNL+  LKMGSSEPRVFSCNF
Sbjct: 1   MESSTSPPPKTPPSHNQEQNDDELEENHHHLRLGIPAEELNLIEGLKMGSSEPRVFSCNF 60

Query: 61  CQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPYAAAGPFFQFRGGP--NRSL 120
           CQRKFYSSQALGGHQNAHKRERTLAKRGGQR PA+G YH YAAA P F   GGP  NRSL
Sbjct: 61  CQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAA-PSFPHPGGPNNNRSL 120

Query: 121 GIQVHALGHKPSHHAPVSSLG-FGIPYGRSYGWSRIPIHQQPGIGKLPLINGGPSINRTD 180
           GIQVHA+ HKPSHHAPVSS   +GI Y RSYGWSR PIHQQPGIGKL L+N G +IN TD
Sbjct: 121 GIQVHAMVHKPSHHAPVSSSSRYGILYDRSYGWSRTPIHQQPGIGKLHLMNAGHAINHTD 180

Query: 181 VTVPRGCSSVGRFVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
              PRGC+SVGRF FDV RSTAA          D+THKVLDLSLKL
Sbjct: 181 GFPPRGCNSVGRFDFDVVRSTAA--------AADDTHKVLDLSLKL 217

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BLAST of Sed0003295 vs. NCBI nr
Match: XP_011649844.1 (zinc finger protein 3 [Cucumis sativus] >KGN62985.1 hypothetical protein Csa_021975 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-73
Identity = 155/232 (66.81%), Postives = 165/232 (71.12%), Query Frame = 0


Query: 1   MEMSTVETP--------QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFC 60
           ME ST   P        QN  E +D  +HLRR +PAEELNL+  LKMGSSEPRVFSCNFC
Sbjct: 1   MESSTAPPPKTASYNQEQNDDELEDNHHHLRREIPAEELNLIEGLKMGSSEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPYAAA-GPFFQFRGGP------ 120
           QRKFYSSQALGGHQNAHKRERTLAKRGGQR PA+G YH YAAA  P F   G P      
Sbjct: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGAYHHYAAAVAPSFPLPGSPNNNNNN 120

Query: 121 NRSLGIQVHALGHKPSHHAPVSSLG-FGIPYGRSY--GWSRIPIHQQPGIGKLPLINGGP 180
           NRSLGIQVHA+ HKPSHH P SS   FG+ YGRSY  GWSR PIHQQPG+GKLPL+N G 
Sbjct: 121 NRSLGIQVHAMVHKPSHHPPASSNSRFGVHYGRSYGGGWSRTPIHQQPGVGKLPLMNAGH 180

Query: 181 SINRTDVTVPRGCSSVGRFVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
            IN T    PRGCSSVGRF FDV RST A          D+THKVLDLSLKL
Sbjct: 181 PINHTTGFPPRGCSSVGRFDFDVVRSTTA--------AADDTHKVLDLSLKL 224

[Close]

BLAST of Sed0003295 vs. NCBI nr
Match: XP_008445256.1 (PREDICTED: zinc finger protein 3-like [Cucumis melo] >KAA0064895.1 zinc finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-72
Identity = 151/214 (70.56%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 10  QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQRKFYSSQALGGHQNAH 69
           QN G+ +D  +HLRR +PAEELNL+  LKM SSEPRVFSCNFCQRKFYSSQALGGHQNAH
Sbjct: 16  QNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFCQRKFYSSQALGGHQNAH 75

Query: 70  KRERTLAKRGGQRLPAYGVYHPYA--AAGPFFQFRGGP-----NRSLGIQVHALGHKPSH 129
           KRERTLAKRGGQR PA+G YH YA  AA P F   GGP     NRSLGIQVHA+ HKPSH
Sbjct: 76  KRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNNNRSLGIQVHAMVHKPSH 135

Query: 130 HAPVSSLG-FGIPYGRS-YGWSRIPIHQQPGIGKLPLINGGPSINRTDVTVPRGCSSVGR 189
           H PVSS   FG+ YGRS  GWSR PIHQQPG+GKLPL+N G  IN T    PRGCSSVGR
Sbjct: 136 HPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHPINHTTGFPPRGCSSVGR 195

Query: 190 FVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
           F FDV RSTAA          D+THKVLDLSLKL
Sbjct: 196 FDFDVVRSTAA--------AADDTHKVLDLSLKL 221

[Close]

BLAST of Sed0003295 vs. NCBI nr
Match: XP_022951695.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 5.1e-68
Identity = 145/222 (65.32%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MEMSTVETP------QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQR 60
           ME S V+TP      +  GE+DDGD +LRRG+PAEELNL+GDLKMGS EPRVFSCNFC+R
Sbjct: 1   MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPY--AAAGPFFQFRGGPNRSLGIQ 120
           KFYSSQALGGHQNAHKRERTLAKRGG        YH Y  AA  PFF F+ GPNRSLGIQ
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGG--------YHHYTAAATAPFFPFQTGPNRSLGIQ 120

Query: 121 VHALGHKPSHHAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKLPLINGGPSINRTDVTVP 180
           +HA+ HKP H+  VSS         S+GWSRIPIHQQPGIGKLP IN       T  + P
Sbjct: 121 LHAMVHKPPHYTAVSS---------SHGWSRIPIHQQPGIGKLPPIN-------THRSPP 180

Query: 181 RGCSSVGRFVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
            G ++VGRF  D+ RSTAA GGV  D +QDETHKVLDLSLKL
Sbjct: 181 HGFNTVGRFNLDMRRSTAAAGGVHFDNKQDETHKVLDLSLKL 198

[Close]

BLAST of Sed0003295 vs. NCBI nr
Match: XP_023538345.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-66
Identity = 145/223 (65.02%), Postives = 161/223 (72.20%), Query Frame = 0


Query: 1   MEMSTVETP------QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQR 60
           ME S V TP      +  GE+DDGD +LRRG+PAEELNL+GDLKMGS EPRVFSCNFC+R
Sbjct: 1   MESSAVYTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPYAAA-GPFFQFRGGPNRSLGIQV 120
           KFYSSQALGGHQNAHKRERTLAKRGG        YH Y AA  PFF F+ GPNRSLGIQ+
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGG--------YHHYTAAMAPFFPFQTGPNRSLGIQI 120

Query: 121 HALGHKPSHHAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKLPLINGGPSINRTDVTVPR 180
           HA+ HKP H+  VSS         S+GWSRIPIHQQPGIGKLP IN       T  + P 
Sbjct: 121 HAMVHKPPHYTAVSS---------SHGWSRIPIHQQPGIGKLPPIN-------THRSPPH 180

Query: 181 GCSSVGRFVFDVARST--AADGGVCIDGQQDETHKVLDLSLKL 215
           G +S+GRF  D+ RST  AA GGV  D +QDETHKVLDLSLKL
Sbjct: 181 GFNSIGRFNLDMLRSTAAAAAGGVHFDNKQDETHKVLDLSLKL 199

[Close]

BLAST of Sed0003295 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-28
Identity = 80/188 (42.55%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 41  SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVY-HPYAAAGPFF 100
           S+E ++FSCN+CQR FYSSQALGGHQNAHKRERTLAKRG +   +   + HPY  +   F
Sbjct: 55  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPF 114

Query: 101 QFRGGPNRSLGIQVHALGHKPSHHAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKLPLIN 160
             +   +RSLGIQ H++ HK S     S  GFG  YG+   WSR+P  QQP IGK P ++
Sbjct: 115 HGQYNNHRSLGIQAHSISHKLS-----SYNGFGGHYGQ-INWSRLPFDQQPAIGKFPSMD 174

Query: 161 G-----------GPSINRTDVTVPRGCSSVGRFV--FDVARSTAADGGVCIDGQQDETHK 215
                        PS+N     +    S+ GR +           D G+ +     E  +
Sbjct: 175 NFHHHHHQMMMMAPSVNSRSNNID-SPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQQ 234

[Close]

BLAST of Sed0003295 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-19
Identity = 67/155 (43.23%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 28  AEELNLVGDLKMGSS-------------EPRVFSCNFCQRKFYSSQALGGHQNAHKRERT 87
           + ELNL+   K  SS             +PRVFSCN+CQRKFYSSQALGGHQNAHKRERT
Sbjct: 36  SSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 95

Query: 88  LAKRGG------QRLPAYGVYHPYAAAGPFFQFRGGP------NRS-LGIQVHALGHKPS 147
           LAKRG         LP+      + +   F      P      NRS LGIQ H+  HKPS
Sbjct: 96  LAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

Query: 148 H-HAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKL 156
                 +SL             +  IHQ+P IGK+
Sbjct: 156 FLGRQTTSLSHVF---------KQSIHQKPTIGKM 181

[Close]

BLAST of Sed0003295 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14
Identity = 55/137 (40.15%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 7   ETPQNSGEKDDGDNHLRRGMPAEELNLVGDLKMG------------SSEPRVFSCNFCQR 66
           ETP + G +   +  L +    E  ++  DLK+              + PRVFSCN+C+R
Sbjct: 10  ETPASRGGEASSNQDLSK---PESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRR 69

Query: 67  KFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYH-PYAAAGPFFQFRGGPNRSLGIQV 126
           KFYSSQALGGHQNAHKRERT+AKR       +G +H PY             + SLG+Q 
Sbjct: 70  KFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYT----------SSSLGMQA 129

Query: 127 HA--LGHKPSHHAPVSS 129
           H+  L H  S   P+ S
Sbjct: 130 HSGLLHHTLSQPQPLVS 133

[Close]

BLAST of Sed0003295 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.7e-14
Identity = 49/97 (50.52%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 41  SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR-----LPAYGVYHPYAAA 100
           S   RVFSCN+CQRKFYSSQALGGHQNAHKRERTLAKR  +       P  G    YAAA
Sbjct: 79  SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAA 138

Query: 101 G-----PFFQFRGGPN------RSLGIQVHALGHKPS 122
                       G  N      R+LGI+ H+  H  S
Sbjct: 139 ATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVS 175

[Close]

BLAST of Sed0003295 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 43  EPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVY---HPYAAAGPF 99
           +PRVFSCN+CQRKFYSSQALGGHQNAHK ERTLAK+  +   +        PY  +G F
Sbjct: 48  QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFSGRF 106

[Close]

BLAST of Sed0003295 vs. ExPASy TrEMBL
Match: A0A0A0LM45 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382580 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 155/232 (66.81%), Postives = 165/232 (71.12%), Query Frame = 0


Query: 1   MEMSTVETP--------QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFC 60
           ME ST   P        QN  E +D  +HLRR +PAEELNL+  LKMGSSEPRVFSCNFC
Sbjct: 1   MESSTAPPPKTASYNQEQNDDELEDNHHHLRREIPAEELNLIEGLKMGSSEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPYAAA-GPFFQFRGGP------ 120
           QRKFYSSQALGGHQNAHKRERTLAKRGGQR PA+G YH YAAA  P F   G P      
Sbjct: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGAYHHYAAAVAPSFPLPGSPNNNNNN 120

Query: 121 NRSLGIQVHALGHKPSHHAPVSSLG-FGIPYGRSY--GWSRIPIHQQPGIGKLPLINGGP 180
           NRSLGIQVHA+ HKPSHH P SS   FG+ YGRSY  GWSR PIHQQPG+GKLPL+N G 
Sbjct: 121 NRSLGIQVHAMVHKPSHHPPASSNSRFGVHYGRSYGGGWSRTPIHQQPGVGKLPLMNAGH 180

Query: 181 SINRTDVTVPRGCSSVGRFVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
            IN T    PRGCSSVGRF FDV RST A          D+THKVLDLSLKL
Sbjct: 181 PINHTTGFPPRGCSSVGRFDFDVVRSTTA--------AADDTHKVLDLSLKL 224

[Close]

BLAST of Sed0003295 vs. ExPASy TrEMBL
Match: A0A5A7VG79 (Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002100 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.4e-73
Identity = 151/214 (70.56%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 10  QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQRKFYSSQALGGHQNAH 69
           QN G+ +D  +HLRR +PAEELNL+  LKM SSEPRVFSCNFCQRKFYSSQALGGHQNAH
Sbjct: 16  QNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFCQRKFYSSQALGGHQNAH 75

Query: 70  KRERTLAKRGGQRLPAYGVYHPYA--AAGPFFQFRGGP-----NRSLGIQVHALGHKPSH 129
           KRERTLAKRGGQR PA+G YH YA  AA P F   GGP     NRSLGIQVHA+ HKPSH
Sbjct: 76  KRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNNNRSLGIQVHAMVHKPSH 135

Query: 130 HAPVSSLG-FGIPYGRS-YGWSRIPIHQQPGIGKLPLINGGPSINRTDVTVPRGCSSVGR 189
           H PVSS   FG+ YGRS  GWSR PIHQQPG+GKLPL+N G  IN T    PRGCSSVGR
Sbjct: 136 HPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHPINHTTGFPPRGCSSVGR 195

Query: 190 FVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
           F FDV RSTAA          D+THKVLDLSLKL
Sbjct: 196 FDFDVVRSTAA--------AADDTHKVLDLSLKL 221

[Close]

BLAST of Sed0003295 vs. ExPASy TrEMBL
Match: A0A1S3BC89 (zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.4e-73
Identity = 151/214 (70.56%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 10  QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQRKFYSSQALGGHQNAH 69
           QN G+ +D  +HLRR +PAEELNL+  LKM SSEPRVFSCNFCQRKFYSSQALGGHQNAH
Sbjct: 16  QNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFCQRKFYSSQALGGHQNAH 75

Query: 70  KRERTLAKRGGQRLPAYGVYHPYA--AAGPFFQFRGGP-----NRSLGIQVHALGHKPSH 129
           KRERTLAKRGGQR PA+G YH YA  AA P F   GGP     NRSLGIQVHA+ HKPSH
Sbjct: 76  KRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNNNRSLGIQVHAMVHKPSH 135

Query: 130 HAPVSSLG-FGIPYGRS-YGWSRIPIHQQPGIGKLPLINGGPSINRTDVTVPRGCSSVGR 189
           H PVSS   FG+ YGRS  GWSR PIHQQPG+GKLPL+N G  IN T    PRGCSSVGR
Sbjct: 136 HPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHPINHTTGFPPRGCSSVGR 195

Query: 190 FVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
           F FDV RSTAA          D+THKVLDLSLKL
Sbjct: 196 FDFDVVRSTAA--------AADDTHKVLDLSLKL 221

[Close]

BLAST of Sed0003295 vs. ExPASy TrEMBL
Match: A0A6J1GJK2 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.5e-68
Identity = 145/222 (65.32%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MEMSTVETP------QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQR 60
           ME S V+TP      +  GE+DDGD +LRRG+PAEELNL+GDLKMGS EPRVFSCNFC+R
Sbjct: 1   MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPY--AAAGPFFQFRGGPNRSLGIQ 120
           KFYSSQALGGHQNAHKRERTLAKRGG        YH Y  AA  PFF F+ GPNRSLGIQ
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGG--------YHHYTAAATAPFFPFQTGPNRSLGIQ 120

Query: 121 VHALGHKPSHHAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKLPLINGGPSINRTDVTVP 180
           +HA+ HKP H+  VSS         S+GWSRIPIHQQPGIGKLP IN       T  + P
Sbjct: 121 LHAMVHKPPHYTAVSS---------SHGWSRIPIHQQPGIGKLPPIN-------THRSPP 180

Query: 181 RGCSSVGRFVFDVARSTAADGGVCIDGQQDETHKVLDLSLKL 215
            G ++VGRF  D+ RSTAA GGV  D +QDETHKVLDLSLKL
Sbjct: 181 HGFNTVGRFNLDMRRSTAAAGGVHFDNKQDETHKVLDLSLKL 198

[Close]

BLAST of Sed0003295 vs. ExPASy TrEMBL
Match: A0A6J1KJP6 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496324 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.1e-63
Identity = 140/226 (61.95%), Postives = 157/226 (69.47%), Query Frame = 0


Query: 1   MEMSTVETP------QNSGEKDDGDNHLRRGMPAEELNLVGDLKMGSSEPRVFSCNFCQR 60
           ME S  +TP      +  GE+D+ D +LRRG+PAEELNL+GDLKMGS EPRVFSCNFC+R
Sbjct: 1   MESSAADTPPRLQLKKGFGEEDESDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYHPY-----AAAGPFFQFRGGPNRSL 120
           KFYSSQALGGHQNAHKRERTLAKRG         YH Y     AA  PFF F+ GPNRSL
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGS--------YHRYTAAAAAATAPFFPFQTGPNRSL 120

Query: 121 GIQVHALGHKPSHHAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKLPLINGGPSINRTDV 180
           GIQ+HA+ HKP H+   SS         S+GWSRIPIHQQPGIGKLP IN   S      
Sbjct: 121 GIQLHAMVHKPPHYTAASS---------SHGWSRIPIHQQPGIGKLPPINSRRS------ 180

Query: 181 TVPRGCSSVGRFVFDVARST-AADGGVCIDGQQDETHKVLDLSLKL 215
             P G +S+GRF  D+ RST AA GGV  D +QDETHKVLDLSLKL
Sbjct: 181 -PPHGFNSIGRFNLDMFRSTAAAAGGVHFDNKQDETHKVLDLSLKL 202

[Close]

BLAST of Sed0003295 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.0e-31
Identity = 89/209 (42.58%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 29  EELNLVGDLKMG----------SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKR 88
           +ELNL+  L+ G          S+E ++FSCN+CQR FYSSQALGGHQNAHKRERTLAKR
Sbjct: 76  QELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR 135

Query: 89  GGQRLPAYGVYHPYAAAGPFFQFRGGPNRSLGIQVHALGHKPSHHAPVSSLGFGIPYGRS 148
           G +   A    HPY  A   F  +   NR+LGIQ H++ HKPS +           YG  
Sbjct: 136 GQRMASAAAFGHPYGFAPVPFHGQYS-NRTLGIQAHSMSHKPSSYN---------VYGGE 195

Query: 149 YG---WSRIPIHQQPGIGKLPLINGGPSINRTDVTVP--RGCSSVGRFVFDVARSTA--- 208
           YG   WSRIP+ QQP I KL       + ++  +  P    C ++GR  FDV R      
Sbjct: 196 YGQINWSRIPLVQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGR--FDVGRIPVEFP 255

Query: 209 -----ADGGVCIDGQQDETHKVLDLSLKL 215
                  G   +   ++E  K LDLSLKL
Sbjct: 256 TSELWQRGEELLKPAEEEKQKNLDLSLKL 272

[Close]

BLAST of Sed0003295 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 80/188 (42.55%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 41  SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVY-HPYAAAGPFF 100
           S+E ++FSCN+CQR FYSSQALGGHQNAHKRERTLAKRG +   +   + HPY  +   F
Sbjct: 55  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPF 114

Query: 101 QFRGGPNRSLGIQVHALGHKPSHHAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKLPLIN 160
             +   +RSLGIQ H++ HK S     S  GFG  YG+   WSR+P  QQP IGK P ++
Sbjct: 115 HGQYNNHRSLGIQAHSISHKLS-----SYNGFGGHYGQ-INWSRLPFDQQPAIGKFPSMD 174

Query: 161 G-----------GPSINRTDVTVPRGCSSVGRFV--FDVARSTAADGGVCIDGQQDETHK 215
                        PS+N     +    S+ GR +           D G+ +     E  +
Sbjct: 175 NFHHHHHQMMMMAPSVNSRSNNID-SPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQQ 234

[Close]

BLAST of Sed0003295 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-20
Identity = 67/155 (43.23%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 28  AEELNLVGDLKMGSS-------------EPRVFSCNFCQRKFYSSQALGGHQNAHKRERT 87
           + ELNL+   K  SS             +PRVFSCN+CQRKFYSSQALGGHQNAHKRERT
Sbjct: 36  SSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 95

Query: 88  LAKRGG------QRLPAYGVYHPYAAAGPFFQFRGGP------NRS-LGIQVHALGHKPS 147
           LAKRG         LP+      + +   F      P      NRS LGIQ H+  HKPS
Sbjct: 96  LAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

Query: 148 H-HAPVSSLGFGIPYGRSYGWSRIPIHQQPGIGKL 156
                 +SL             +  IHQ+P IGK+
Sbjct: 156 FLGRQTTSLSHVF---------KQSIHQKPTIGKM 181

[Close]

BLAST of Sed0003295 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 55/137 (40.15%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 7   ETPQNSGEKDDGDNHLRRGMPAEELNLVGDLKMG------------SSEPRVFSCNFCQR 66
           ETP + G +   +  L +    E  ++  DLK+              + PRVFSCN+C+R
Sbjct: 10  ETPASRGGEASSNQDLSK---PESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRR 69

Query: 67  KFYSSQALGGHQNAHKRERTLAKRGGQRLPAYGVYH-PYAAAGPFFQFRGGPNRSLGIQV 126
           KFYSSQALGGHQNAHKRERT+AKR       +G +H PY             + SLG+Q 
Sbjct: 70  KFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYT----------SSSLGMQA 129

Query: 127 HA--LGHKPSHHAPVSS 129
           H+  L H  S   P+ S
Sbjct: 130 HSGLLHHTLSQPQPLVS 133

[Close]

BLAST of Sed0003295 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 49/97 (50.52%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 41  SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR-----LPAYGVYHPYAAA 100
           S   RVFSCN+CQRKFYSSQALGGHQNAHKRERTLAKR  +       P  G    YAAA
Sbjct: 79  SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAA 138

Query: 101 G-----PFFQFRGGPN------RSLGIQVHALGHKPS 122
                       G  N      R+LGI+ H+  H  S
Sbjct: 139 ATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVS 175

The following BLAST results are available for this feature:

BLAST of Sed0003295 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886144.1	5.6e-75	69.47	zinc finger protein 3-like [Benincasa hispida]	[more]
XP_011649844.1	3.1e-73	66.81	zinc finger protein 3 [Cucumis sativus] >KGN62985.1 hypothetical protein Csa_021...	[more]
XP_008445256.1	1.5e-72	70.56	PREDICTED: zinc finger protein 3-like [Cucumis melo] >KAA0064895.1 zinc finger p...	[more]
XP_022951695.1	5.1e-68	65.32	zinc finger protein 1-like [Cucurbita moschata]	[more]
XP_023538345.1	1.2e-66	65.02	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0003295 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	1.8e-28	42.55	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q42485	5.9e-19	43.23	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39266	2.6e-14	40.15	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39263	5.7e-14	50.52	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39261	3.1e-12	61.02	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Sed0003295 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM45	1.5e-73	66.81	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382580 P...	[more]
A0A5A7VG79	7.4e-73	70.56	Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BC89	7.4e-73	70.56	zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1	[more]
A0A6J1GJK2	2.5e-68	65.32	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV...	[more]
A0A6J1KJP6	1.1e-63	61.95	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496324 PE=4 SV=1	[more]

BLAST of Sed0003295 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	4.0e-31	42.58	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.3e-29	42.55	zinc finger protein 3	[more]
AT1G80730.1	4.2e-20	43.23	zinc-finger protein 1	[more]
AT1G24625.1	1.8e-15	40.15	zinc finger protein 7	[more]
AT1G66140.1	4.1e-15	50.52	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 33..85 e-value: 5.3E-6 score: 28.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 29..214
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 29..214
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 49..69
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 47..74 score: 11.239817
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 44..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003295.1	Sed0003295.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway