Sed0003282 (gene) Chayote v1

Overview


Name	Sed0003282
Type	gene
Organism	Sechium edule (Chayote v1)
Description	hydroxyproline-rich glycoprotein family protein
Location	LG01: 63971315 .. 63973669 (-)
RNA-Seq Expression	Sed0003282
Synteny	Sed0003282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCAGTATTGCTCTCGTTTATTTTGATATTTATTCTACAAAACACATTTGTTTTTGGAAAAAAAAAACGATCTCCACCATATCCATGTAGTTTGACTTTTATTCAAAGCCGCCGTCACTCACTCGCATCATTGTCCCTCCATTATTACCATTCATGAATTTCCCTCCCTCAAATTCAATCTCCCCATTAAAATCTCAACCACTCCACTCCTAAAATACCACTCTCCCTACACTAACATCCATTTTACCAACCAAATTTCCTTTCTTTTCCATCACCCATGTGGCCGGAGCCGCCGCTCACGGCGGATCAGACCTCTGCCCCAACGCTGGCTCTGTCCTGGCTTCCGCCGGAGCCGCCGTGGATGCCCACGCCCCCTCGTTTGGCTCTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCCGGGAAGCCCCGCCCCTCCGCCGGATCGGAACTGTCGTGGCCGTCGCCGGCGCCGGCGGAGCTGCCTCCGCCGCCCCGGTTGTTGATTGAGGCGAAACAGAGTGCTCTGCTTTCGCCGACGACGGTGCTCGACGGCCCGGAAAGGGGCGGCGATGGATCGAAGAGATGGAGTTCTTTCAGGATGTGTAAGGAGCTTGTCGGCGGCGGCAATGACTCTTTCGCCGCCGGTTTCGACGGCGGCGGTGGAGGCAGGAGGTTTGGCCGGGGGAGGGCTCAATCATTGTCGGTTTCTTCTTATGGAAGGTCCCACTTTTTGGTAAGTCTAAATATTTCCGACTTTTTTTTTTCTTCATATTATATTTTCGATAAAATAAAATAAAAAGCAAATAAAGGTGTGTGACTTGATAGTTTTTTGTTTTGTTATGCTTAATATGTTGATTTATGCTGAATGATTAAAAAAAAAAACGTTTCCTGTTTTTTTTTTTTTTTTTTTGAGACAACGCTAACTGTTTTCTTGTATTTTAGAATATTTATATATAATTAAGAGTTCATATATTCCAACCTTAGGCATTTAAGTATTTTTTAACTCAAAATAATTTGAAAATGAGATAACAAAGATATTGCAGAGGCAAATGCAGCAAATTTTATTGTCTGAAGGTAGACTTGATTTTATTTTGTAGAGCTAGACTTGCAATCATTTTGAAGAAGAGTAATATTTAGGGAATAATAATGTATCACATTTCAGTACACTATTTCTCTTTTATTAGTCAAATCATCATTTTTATATATATTTTACTGCACTTTTTATATACTTACACTACTCATATACTATGTATTATTGTCATCATAAATAGTGAAAAGTATGTACTTCCTAAGAAATATCCAAGTTTTCCTCTTTTGAGGAAAAACCCTAATATCAAATTTTGGAATTTGGATAGACCACTATCTTATATGCACAATAAAAATATTATTAAAATATATTATTGTTCACTTTTTATACTAAAAATAATTTATTTTAAAAGTGAAAATATTATTATTATAAATAGTATGTTATTTTAAATGAGGTTTGAGATGCAAGTTATTATTAAAAAGAATAATGATATATAAACAAAGTTTGAGGTACAAACTATATATCCCTTATAAAAGGAAAAAATTAATCTCAAACGCCCGTGAAGATTATGTGAAATGGTCGTGATTATTTTGATTAACCCACCGATTAATTGATGAGTCAAATATGGGTTGAGTTATAATAACCCAATTTCCCATTTCATAAATGATCTCCCAAACATAGCCGAGGATATTATAGGTCATAGCCTCTTTAGTAGTTTCTTTACCATTACATTATTGGTCCTTGCCAACATAGATACCTCACATTTAATGTATTAAAACATGATAAATATACATCAAATTTTGTTTTCATATTCGTGATTGGCTGGGTTGATTTACACATACCTCGACTATTGTCATAGAAGATATCGTATGACTCTACAACATTTGGATATCAAAAGAAATGCGTAGAAAATTCGTTTTTCTTAAGTAGGTTGTCACCATGTCTAGCTTATATCAATTATTTACCAAGTAGTTAGCATAATATTTTCCAATATTTAACAAGAAATATTAAACTATTCATTTTGTAACTGAAATTGAAGATGGATTGCATTGCAGGTGAAGATGTATAAGAGCTTTAAACATATTCTCTCAAGGAGGGGAAGATCAATATCATAATTAACTTCAAAACTATGGCATGCAAGTAATGTTTATAAGCACGTGATAAATTTTAATTATCTTAGCTTACAAATTAGAACCAAGTTGTAAGCTTAAACAAATGTATATGCGTATGTAATGTTTATGTATGTATTTGAGATTTACTTTCAAATAATTTAGTTTGTACTTGAGGAAAATTACATTTTTAGTTTTTAGTTTTTAGGTTTAAA

mRNA sequence

GACCAGTATTGCTCTCGTTTATTTTGATATTTATTCTACAAAACACATTTGTTTTTGGAAAAAAAAAACGATCTCCACCATATCCATGTAGTTTGACTTTTATTCAAAGCCGCCGTCACTCACTCGCATCATTGTCCCTCCATTATTACCATTCATGAATTTCCCTCCCTCAAATTCAATCTCCCCATTAAAATCTCAACCACTCCACTCCTAAAATACCACTCTCCCTACACTAACATCCATTTTACCAACCAAATTTCCTTTCTTTTCCATCACCCATGTGGCCGGAGCCGCCGCTCACGGCGGATCAGACCTCTGCCCCAACGCTGGCTCTGTCCTGGCTTCCGCCGGAGCCGCCGTGGATGCCCACGCCCCCTCGTTTGGCTCTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCCGGGAAGCCCCGCCCCTCCGCCGGATCGGAACTGTCGTGGCCGTCGCCGGCGCCGGCGGAGCTGCCTCCGCCGCCCCGGTTGTTGATTGAGGCGAAACAGAGTGCTCTGCTTTCGCCGACGACGGTGCTCGACGGCCCGGAAAGGGGCGGCGATGGATCGAAGAGATGGAGTTCTTTCAGGATGTGTAAGGAGCTTGTCGGCGGCGGCAATGACTCTTTCGCCGCCGGTTTCGACGGCGGCGGTGGAGGCAGGAGGTTTGGCCGGGGGAGGGCTCAATCATTGTCGGTTTCTTCTTATGGAAGGTCCCACTTTTTGGTGAAGATGTATAAGAGCTTTAAACATATTCTCTCAAGGAGGGGAAGATCAATATCATAATTAACTTCAAAACTATGGCATGCAAGTAATGTTTATAAGCACGTGATAAATTTTAATTATCTTAGCTTACAAATTAGAACCAAGTTGTAAGCTTAAACAAATGTATATGCGTATGTAATGTTTATGTATGTATTTGAGATTTACTTTCAAATAATTTAGTTTGTACTTGAGGAAAATTACATTTTTAGTTTTTAGTTTTTAGGTTTAAA

Coding sequence (CDS)

ATGTGGCCGGAGCCGCCGCTCACGGCGGATCAGACCTCTGCCCCAACGCTGGCTCTGTCCTGGCTTCCGCCGGAGCCGCCGTGGATGCCCACGCCCCCTCGTTTGGCTCTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCCGGGAAGCCCCGCCCCTCCGCCGGATCGGAACTGTCGTGGCCGTCGCCGGCGCCGGCGGAGCTGCCTCCGCCGCCCCGGTTGTTGATTGAGGCGAAACAGAGTGCTCTGCTTTCGCCGACGACGGTGCTCGACGGCCCGGAAAGGGGCGGCGATGGATCGAAGAGATGGAGTTCTTTCAGGATGTGTAAGGAGCTTGTCGGCGGCGGCAATGACTCTTTCGCCGCCGGTTTCGACGGCGGCGGTGGAGGCAGGAGGTTTGGCCGGGGGAGGGCTCAATCATTGTCGGTTTCTTCTTATGGAAGGTCCCACTTTTTGGTGAAGATGTATAAGAGCTTTAAACATATTCTCTCAAGGAGGGGAAGATCAATATCATAA

Protein sequence

MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELSWPSPAPAELPPPPRLLIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGGGNDSFAAGFDGGGGGRRFGRGRAQSLSVSSYGRSHFLVKMYKSFKHILSRRGRSIS

Homology

[Close]

BLAST of Sed0003282 vs. NCBI nr
Match: XP_022995989.1 (uncharacterized protein At4g00950-like [Cucurbita maxima])

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-57
Identity = 124/170 (72.94%), Postives = 134/170 (78.82%), Query Frame = 0


Query: 1   MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELS 60
           MW EPP T +++S P+L LS LPPEPPWMPTPPRL LASVPFLWEEAPGKPRP AGSE+ 
Sbjct: 1   MWSEPPHTLERSSTPSLVLSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WPSPAPAELPPPPRLLIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGGGNDS 120
           W SP   +LPPPPRLL EA QS LLSPTTVLDGPER   GSKRW SFRMCKELV GGNDS
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPER-AYGSKRWGSFRMCKELVSGGNDS 120

Query: 121 FAAGFDGGGGGR-RFGRGRAQSLSVSSYGRSHFLVKMYKSFKHILSRRGR 170
            A G DGGGGG  RFG+    SLSVSSYGRSHFLVK+Y+ FK +   R R
Sbjct: 121 LATGVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFQGRRR 169

[Close]

BLAST of Sed0003282 vs. NCBI nr
Match: XP_022958693.1 (uncharacterized protein LOC111459844 [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 2.1e-56
Identity = 123/170 (72.35%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 1   MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELS 60
           MW EPP T +++S P+L  S LPPEPPWMPTPPRL LASVPFLWEEAPGKPRP AGSE+ 
Sbjct: 1   MWSEPPHTPERSSTPSLVFSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WPSPAPAELPPPPRLLIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGGGNDS 120
           W SP   +LPPPPRLL EA QS LLSPTTVLDGPER   GSKRW SFRMCKELVGGGNDS
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPER-AYGSKRWGSFRMCKELVGGGNDS 120

Query: 121 FAAGFDGGGGGR-RFGRGRAQSLSVSSYGRSHFLVKMYKSFKHILSRRGR 170
            A   DGGGGG  RFG+    SLSVSSYGRSHFLVK+Y+ FK +   R R
Sbjct: 121 LATVVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFPWRRR 169

[Close]

BLAST of Sed0003282 vs. NCBI nr
Match: KAG6605789.1 (hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035754.1 hypothetical protein SDJN02_02552, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-55
Identity = 122/170 (71.76%), Postives = 132/170 (77.65%), Query Frame = 0


Query: 1   MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELS 60
           MW EPP T +++S P+L  S LPPEPPWMPTPPRL LASVPFLWEEAPGKPRP AGSE+ 
Sbjct: 1   MWSEPPHTPERSSTPSLVFSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WPSPAPAELPPPPRLLIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGGGNDS 120
           W SP   +LPPPPRLL EA QS LLSPTTVLDGPER   GSKRW SFRMCKELVGGGNDS
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPER-AYGSKRWGSFRMCKELVGGGNDS 120

Query: 121 FAAGFDG-GGGGRRFGRGRAQSLSVSSYGRSHFLVKMYKSFKHILSRRGR 170
            A   DG GGG  RFG+    SLSVSSYGRSHFLVK+Y+ FK +   R R
Sbjct: 121 LATVVDGCGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFPCRRR 169

[Close]

BLAST of Sed0003282 vs. NCBI nr
Match: XP_038875428.1 (uncharacterized protein LOC120067888 [Benincasa hispida])

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-49
Identity = 112/156 (71.79%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELS 60
           M  EPP T  +TS PTL LSWLPPEPPWMPTPPRL LASVPFLWEEAPGKPR SA S++ 
Sbjct: 1   MCSEPPHTPHRTSIPTLPLSWLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRSSAASKVL 60

Query: 61  WPSPAPAELPPPPRLLIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGG---G 120
           WP PA  ELPPPP+L  EAKQS L SPTT+LDGPER GD SKRW SFRM K+ VGG   G
Sbjct: 61  WPVPALGELPPPPQLFNEAKQSTLPSPTTLLDGPERAGDRSKRWGSFRMFKDFVGGNGNG 120

Query: 121 NDSFAAGFDGGGGGRRFGRGRAQSLSVSSYGRSHFL 154
           NDS AAG D GGG   F R R  S SVSSY RSHFL
Sbjct: 121 NDSLAAGADCGGGSGWFRRKRTSSSSVSSYTRSHFL 156

[Close]

BLAST of Sed0003282 vs. NCBI nr
Match: KAA0042546.1 (uncharacterized protein E6C27_scaffold44G00400 [Cucumis melo var. makuwa] >TYK05950.1 uncharacterized protein E5676_scaffold376G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-35
Identity = 107/178 (60.11%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 1   MWPEPPLTADQ-TSAPTLALSWLPP-EPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSE 60
           M  EPP T    TS PTL LSWLP  + PWMPTPPRL L SVPFLWEEAPGKPRPS  S+
Sbjct: 1   MCSEPPHTTHHPTSTPTLPLSWLPVLDSPWMPTPPRLTLVSVPFLWEEAPGKPRPSTASK 60

Query: 61  LSWPSPAPA-ELPPPPRLL-IEAKQS-ALLSPTTVLDGPERGG-DGSKRWSSFRMCKELV 120
           + W  P  A +LPPPPRLL  E KQS  L SPTTVLDG ERGG  GSKRW SFRMC+   
Sbjct: 61  VLWQVPVVAGKLPPPPRLLKNEVKQSNNLPSPTTVLDGDERGGMVGSKRWGSFRMCE--- 120

Query: 121 GGGNDSFAAGFDGGGGGRRFGRGR-AQSLSVSSYG-RSHFLVKMYKSFKHILSRRGRS 171
                      + GGG  RF RGR A SLS+SSY   SHFLV +Y+SFK +L  R R+
Sbjct: 121 -----------NNGGGSGRFRRGRSASSLSLSSYATSSHFLVNIYESFKQVLPWRRRT 164

[Close]

BLAST of Sed0003282 vs. ExPASy TrEMBL
Match: A0A6J1K7H0 (uncharacterized protein At4g00950-like OS=Cucurbita maxima OX=3661 GN=LOC111491336 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 9.2e-58
Identity = 124/170 (72.94%), Postives = 134/170 (78.82%), Query Frame = 0


Query: 1   MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELS 60
           MW EPP T +++S P+L LS LPPEPPWMPTPPRL LASVPFLWEEAPGKPRP AGSE+ 
Sbjct: 1   MWSEPPHTLERSSTPSLVLSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WPSPAPAELPPPPRLLIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGGGNDS 120
           W SP   +LPPPPRLL EA QS LLSPTTVLDGPER   GSKRW SFRMCKELV GGNDS
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPER-AYGSKRWGSFRMCKELVSGGNDS 120

Query: 121 FAAGFDGGGGGR-RFGRGRAQSLSVSSYGRSHFLVKMYKSFKHILSRRGR 170
            A G DGGGGG  RFG+    SLSVSSYGRSHFLVK+Y+ FK +   R R
Sbjct: 121 LATGVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFQGRRR 169

[Close]

BLAST of Sed0003282 vs. ExPASy TrEMBL
Match: A0A6J1H3S6 (uncharacterized protein LOC111459844 OS=Cucurbita moschata OX=3662 GN=LOC111459844 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 123/170 (72.35%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 1   MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELS 60
           MW EPP T +++S P+L  S LPPEPPWMPTPPRL LASVPFLWEEAPGKPRP AGSE+ 
Sbjct: 1   MWSEPPHTPERSSTPSLVFSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WPSPAPAELPPPPRLLIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGGGNDS 120
           W SP   +LPPPPRLL EA QS LLSPTTVLDGPER   GSKRW SFRMCKELVGGGNDS
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPER-AYGSKRWGSFRMCKELVGGGNDS 120

Query: 121 FAAGFDGGGGGR-RFGRGRAQSLSVSSYGRSHFLVKMYKSFKHILSRRGR 170
            A   DGGGGG  RFG+    SLSVSSYGRSHFLVK+Y+ FK +   R R
Sbjct: 121 LATVVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFPWRRR 169

[Close]

BLAST of Sed0003282 vs. ExPASy TrEMBL
Match: A0A5A7TKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00430 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 9.9e-36
Identity = 107/178 (60.11%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 1   MWPEPPLTADQ-TSAPTLALSWLPP-EPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSE 60
           M  EPP T    TS PTL LSWLP  + PWMPTPPRL L SVPFLWEEAPGKPRPS  S+
Sbjct: 1   MCSEPPHTTHHPTSTPTLPLSWLPVLDSPWMPTPPRLTLVSVPFLWEEAPGKPRPSTASK 60

Query: 61  LSWPSPAPA-ELPPPPRLL-IEAKQS-ALLSPTTVLDGPERGG-DGSKRWSSFRMCKELV 120
           + W  P  A +LPPPPRLL  E KQS  L SPTTVLDG ERGG  GSKRW SFRMC+   
Sbjct: 61  VLWQVPVVAGKLPPPPRLLKNEVKQSNNLPSPTTVLDGDERGGMVGSKRWGSFRMCE--- 120

Query: 121 GGGNDSFAAGFDGGGGGRRFGRGR-AQSLSVSSYG-RSHFLVKMYKSFKHILSRRGRS 171
                      + GGG  RF RGR A SLS+SSY   SHFLV +Y+SFK +L  R R+
Sbjct: 121 -----------NNGGGSGRFRRGRSASSLSLSSYATSSHFLVNIYESFKQVLPWRRRT 164

[Close]

BLAST of Sed0003282 vs. ExPASy TrEMBL
Match: A0A6J1DV06 (uncharacterized protein At4g00950-like OS=Momordica charantia OX=3673 GN=LOC111024622 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.9e-35
Identity = 95/171 (55.56%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 1   MWPEPPLTADQTSAPTLALSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELS 60
           MW EPP   + +S PTL+LS L PEPPWMPTPPRL LAS+PFLWEEAPGKPR  AGS+  
Sbjct: 1   MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAP 60

Query: 61  WPSPAP---AELPPPPRLLIEAKQSALLSPTTVLDGPE---RGGDGSKRWSSFRMCKELV 120
              P P     L  PPRL     Q+AL SPTTVLDGPE    GG  SKRW SFR CKE+ 
Sbjct: 61  PSPPLPPGERTLELPPRL-----QTALPSPTTVLDGPEIRRAGGSNSKRWGSFRKCKEIA 120

Query: 121 GGGNDSFAAGFDGGGGGRRFGRGRAQSLSVSSYGRSHFLVKMYKSFKHILS 166
                        GGGG R  R R   LSVSSY +SHFLV +Y+ FK +++
Sbjct: 121 -----------VAGGGGGRLRRKRNVLLSVSSYSKSHFLVSIYERFKQVVT 155

[Close]

BLAST of Sed0003282 vs. ExPASy TrEMBL
Match: A0A1S3AU39 (uncharacterized protein LOC103482969 OS=Cucumis melo OX=3656 GN=LOC103482969 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34
Identity = 106/178 (59.55%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 1   MWPEPPLTADQ-TSAPTLALSWLPP-EPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSE 60
           M  EPP T    TS PTL LSWLP  + PWMPTPPRL L SVPFLWEEAPGKPRPS  S+
Sbjct: 1   MCSEPPHTTHHPTSTPTLPLSWLPVLDSPWMPTPPRLTLVSVPFLWEEAPGKPRPSTASK 60

Query: 61  LSWPSPAPA-ELPPPPRLL-IEAKQS-ALLSPTTVLDGPERGG-DGSKRWSSFRMCKELV 120
           + W  P  A +LPPPPRLL  E KQS  L SPTTVLDG ERGG  GSKRW SFRMC+   
Sbjct: 61  VLWQVPVVAGKLPPPPRLLKNEVKQSNNLPSPTTVLDGDERGGMVGSKRWGSFRMCE--- 120

Query: 121 GGGNDSFAAGFDGGGGGRRFGRGR-AQSLSVSSYGRSH-FLVKMYKSFKHILSRRGRS 171
                      + GGG  RF RGR A SLS+SSY  S  FLV +Y+SFK +L  R R+
Sbjct: 121 -----------NNGGGSGRFRRGRSASSLSLSSYATSSPFLVNIYESFKQVLPWRRRT 164

[Close]

BLAST of Sed0003282 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 5.0e-08
Identity = 59/161 (36.65%), Postives = 74/161 (45.96%), Query Frame = 0


Query: 25  EPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSELSWPSPAPAE---------LPPPPRL 84
           + P + TPP     SVPFLWEEAPGKPR S  ++         E         L  PPRL
Sbjct: 29  DTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNEREGGGGGVVRCLELPPRL 88

Query: 85  LIEAKQSALLSPTTVLDGPERGGDGSKRWSSFRMCKELVGGGNDSFAAG-----FDGGGG 144
              A      SPTTVLDGP    D  +R  S     E    G   F+        DGGGG
Sbjct: 89  FFPADDEP--SPTTVLDGPY---DVPRRSLSVIRRSERASEGRFEFSRSTNSRCCDGGGG 148

Query: 145 GR-RFGRGRAQ-SLSVSSYGRSHFLVKMYKSFKHILSRRGR 170
              +  R R + SL   S+ +S FL ++Y+ FK ++  R R
Sbjct: 149 TTVKISRVRRKGSLLNLSHSKSQFLARVYQGFKQVIPWRRR 184

[Close]

BLAST of Sed0003282 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 7.3e-07
Identity = 59/194 (30.41%), Postives = 74/194 (38.14%), Query Frame = 0


Query: 27  PWMPTPPRLALASVPFLWEEAPGKPRPSAGSELSWPSPAPAELPPPPRLLIEAKQSAL-- 86
           P + TPP     SVPFLWEEAPGKPR                L  PPRL++  + + +  
Sbjct: 35  PGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGVVRSLELPPRLVLPGESTTVNE 94

Query: 87  LSPTTVLDGP-------------------------------ERGGDGSKRWSSFRMCKEL 146
            SPTTVLDGP                               ER   GS RW SF  CKE+
Sbjct: 95  PSPTTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPEKEERLVGGSSRWGSFGNCKEV 154

Query: 147 VGG----------GNDSFAAGFDGGGGGRRFGRGRAQSLSVSSYG---------RSHFLV 165
             G          G D       GGG G   G  + +   +   G         +S F +
Sbjct: 155 SEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKKGSFFNLSHTTKSDFWL 214

[Close]

BLAST of Sed0003282 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 57/186 (30.65%), Postives = 69/186 (37.10%), Query Frame = 0


Query: 27  PWMPTPPRLALASVPFLWEEAPGKPRPSAGSELSWPSPAPAELPPPPRLLIEAKQSAL-- 86
           P + TPP     SVPFLWEEAPGKPR                L  PPRL++  + + +  
Sbjct: 35  PGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGVVRSLELPPRLVLPGESTTVNE 94

Query: 87  LSPTTVLDGP-------------------------------ERGGDGSKRWSSFRMCKEL 146
            SPTTVLDGP                               ER   GS RW SF  CKE+
Sbjct: 95  PSPTTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPEKEERLVGGSSRWGSFGNCKEV 154

Query: 147 VGG----------GNDSFAAGFDGGGGGRRFGRGRAQSLSVSSYG---------RSHFLV 161
             G          G D       GGG G   G  + +   +   G         +S F V
Sbjct: 155 SEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKKGSFFNLSHTTKSDFWV 214

[Close]

BLAST of Sed0003282 vs. TAIR 10
Match: AT5G51680.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.4e-04
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 1  MWPEPPLTADQTSAPTLA--LSWLPPEPPWMPTPPRLALASVPFLWEEAPGKPRPSAGSE 60
          +W E P    +   P+LA  +   PP PP +P P +L + SVPF WEE PGKP P++ ++
Sbjct: 25 IWEERPGFPKKNWQPSLATFVPSPPPLPPPIPVPVKL-VTSVPFRWEETPGKPLPASSND 84

Query: 61 LSWPSPAPAELPPPP 74
                 P +LP PP
Sbjct: 85 -------PPQLPHPP 91

The following BLAST results are available for this feature:

BLAST of Sed0003282 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995989.1	1.9e-57	72.94	uncharacterized protein At4g00950-like [Cucurbita maxima]	[more]
XP_022958693.1	2.1e-56	72.35	uncharacterized protein LOC111459844 [Cucurbita moschata]	[more]
KAG6605789.1	1.4e-55	71.76	hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038875428.1	1.9e-49	71.79	uncharacterized protein LOC120067888 [Benincasa hispida]	[more]
KAA0042546.1	2.0e-35	60.11	uncharacterized protein E6C27_scaffold44G00400 [Cucumis melo var. makuwa] >TYK05...	[more]

BLAST of Sed0003282 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0003282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7H0	9.2e-58	72.94	uncharacterized protein At4g00950-like OS=Cucurbita maxima OX=3661 GN=LOC1114913...	[more]
A0A6J1H3S6	1.0e-56	72.35	uncharacterized protein LOC111459844 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A5A7TKS5	9.9e-36	60.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DV06	2.9e-35	55.56	uncharacterized protein At4g00950-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3AU39	1.1e-34	59.55	uncharacterized protein LOC103482969 OS=Cucumis melo OX=3656 GN=LOC103482969 PE=...	[more]

BLAST of Sed0003282 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27810.1	5.0e-08	36.65	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ...	[more]
AT5G53030.1	7.3e-07	30.41	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ...	[more]
AT5G53030.2	1.2e-06	30.65	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ...	[more]
AT5G51680.1	4.4e-04	40.00	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..73
None	No IPR available	PANTHER	PTHR34371:SF2	DUF688 FAMILY PROTEIN	coord: 17..112
None	No IPR available	PANTHER	PTHR34371	OS01G0551000 PROTEIN	coord: 17..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003282.1	Sed0003282.1	mRNA