Sed0003272 (gene) Chayote v1

Overview


Name	Sed0003272
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	LG14: 3139528 .. 3141559 (-)
RNA-Seq Expression	Sed0003272
Synteny	Sed0003272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTCTTCAACCTCTGGACAAATGAAAAACAAAATTCATCGCAGAATCAAAATCTATGACCGTTTTCTCTCCGCCATGGAACACTCAGCTCAGAGAATTAGCAAAACGCTGTCAATTCCTCCAAGCTCTGAATCTCTACTCCCAAATGCTCCGCCATGGCGATCGCCCCAACGCCTTCACTTTCCCCTTCGCTCTCAAATCATGCGCCGCTCTCTCGCGCCCAATCCTCGGCGCCCAACTCCATGGACAAATCATCAAACTTGGCTGTGAAGCTGAACCATTTGTGCAAACGGGTTTGATCTCTATGTACTGTAAAGGCTCTTCGGTTGAGAATGCCCGGAAAGTGTTCGACGAAAATCCCCAGTCAAGAAGACTTACTGTTTGCTACAATGCTTTGGTTTCCGGGTATGTTTTGAATTTGAAAATCTCCGATGCGGTTCTTTTGTTTCGCCGAATGAATGAAGTGGGTGTGTCTGTTAATTCGGTCACGTTGCTGGGTTTGATCCCAATTTGTGTTTCACCGATTAATTTGGAGCTTGGATCGTCTCTTCATGGTGCTACATTGAAATATGGATTGGATTCTGATGTCTCCGTTGTTAACTGCTTTATTACCATGTATATGAAATTTGGTTTGGTTAATTATGCACAAGAACTGTTTCATGAAATGCCCGAGAAGGGTTTGATTTCTTGGAACGCTATGATTTCTGGGTATGCACAAAATGGGCTGGCATCAAATGTTTTGGAGCTCTATTATAAAATGGAGTTGCATGGGGTTCATCCGGATCCTGTAACTTTTGTTGGGGTTTTGTCATCTTGTGCTAATCTTGGCGCTCAGAGTGTTGGTCGAGAGGTCGAGTTTAAGATCCAAGCTTGTTGGTTTGGCCAAAATCCGTTTCTAAGCAATTCTTTGATCAACATGTACGCCAGGTGCGGCAATTTAGCCAAGGCACGAGCTTTGTTCGATGAAATGCCGAAGAGAACATTAGTTTCATGGACAGCAATTATAGGTGGGTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTTTTCGAGGAGATGATAAGCTGTGGCATTGTACCTGATGGAACTGCATTTGTTAGTGTCTTGTCTGCTTGTAGCCATGCAGGACTTACTGATCAGGGCTTGGAATATTTCAAGATGATGAGGACAAACTATCAATTGGAACCAGGTCCAGAGCATTATTCGTGCACGGTGGATCTTCTCGGACGAGCAGGGCGGTTAAATGAAGCTAGAAATCTCATTGAATCCATGCCAATAAAGCCTGATGGTGCTGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACCAGAATGTTGAGTTAGCAGAGTTGGCTTTTGAACGTGTGGTTGAGCTTGAACCTGAAAACATAGGATACTATGTCTTATTATCGAACATCTATTCCGATGCGAACAATTCAAAAGGGGTTTTGAGGATTCGGGTTATGATGAAGAAGAGGAATTTGAAGAAGGATCCTGGATGTAGCCATGTTGAATTGAATGGCAGAGTTCATCCATTTGTGGTTGGGGATAGAAAACATCCCCAGGCTGAAGAGATATACAGAGTCTTAGATGAGTTAGAAGCATTAGTGCAGGAATTTGGAGGGCCTAAGAGAGATGAAAGCAACAAAGATTTGTTGACTGGAGCTGGTGGTGTTCATAGTGAAAAGTTGGCTGTTGCTTTTGGACTCTTGAATACCATGTCTGGGACAGAAATTGTGATCATAAAAAACCTTAGGATTTGTGAAGATTGTCACTTGTTTTTCAAGTTGGTTAGTAAAATCGTCCATCGTCAATTGACTGTTAGAGATGCAACTCGCTTCCACCATTTTAGAAATGGGAGCTGTTCTTGCAAAGATTATTGGTAGGATCATGGACTTGTTTGCTTTTGGTTAAATTATAAATTCAAAATTCACCCTTTCAAGAGTAGAAAATTGAAGGTTGACAGACGTTATTGTTATTTATTATTATTATTTTTTACTGTGAGTATTCAAGTCAATTTATGTAC

mRNA sequence

AGCTTCTTCAACCTCTGGACAAATGAAAAACAAAATTCATCGCAGAATCAAAATCTATGACCGTTTTCTCTCCGCCATGGAACACTCAGCTCAGAGAATTAGCAAAACGCTGTCAATTCCTCCAAGCTCTGAATCTCTACTCCCAAATGCTCCGCCATGGCGATCGCCCCAACGCCTTCACTTTCCCCTTCGCTCTCAAATCATGCGCCGCTCTCTCGCGCCCAATCCTCGGCGCCCAACTCCATGGACAAATCATCAAACTTGGCTGTGAAGCTGAACCATTTGTGCAAACGGGTTTGATCTCTATGTACTGTAAAGGCTCTTCGGTTGAGAATGCCCGGAAAGTGTTCGACGAAAATCCCCAGTCAAGAAGACTTACTGTTTGCTACAATGCTTTGGTTTCCGGGTATGTTTTGAATTTGAAAATCTCCGATGCGGTTCTTTTGTTTCGCCGAATGAATGAAGTGGGTGTGTCTGTTAATTCGGTCACGTTGCTGGGTTTGATCCCAATTTGTGTTTCACCGATTAATTTGGAGCTTGGATCGTCTCTTCATGGTGCTACATTGAAATATGGATTGGATTCTGATGTCTCCGTTGTTAACTGCTTTATTACCATGTATATGAAATTTGGTTTGGTTAATTATGCACAAGAACTGTTTCATGAAATGCCCGAGAAGGGTTTGATTTCTTGGAACGCTATGATTTCTGGGTATGCACAAAATGGGCTGGCATCAAATGTTTTGGAGCTCTATTATAAAATGGAGTTGCATGGGGTTCATCCGGATCCTGTAACTTTTGTTGGGGTTTTGTCATCTTGTGCTAATCTTGGCGCTCAGAGTGTTGGTCGAGAGGTCGAGTTTAAGATCCAAGCTTGTTGGTTTGGCCAAAATCCGTTTCTAAGCAATTCTTTGATCAACATGTACGCCAGGTGCGGCAATTTAGCCAAGGCACGAGCTTTGTTCGATGAAATGCCGAAGAGAACATTAGTTTCATGGACAGCAATTATAGGTGGGTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTTTTCGAGGAGATGATAAGCTGTGGCATTGTACCTGATGGAACTGCATTTGTTAGTGTCTTGTCTGCTTGTAGCCATGCAGGACTTACTGATCAGGGCTTGGAATATTTCAAGATGATGAGGACAAACTATCAATTGGAACCAGGTCCAGAGCATTATTCGTGCACGGTGGATCTTCTCGGACGAGCAGGGCGGTTAAATGAAGCTAGAAATCTCATTGAATCCATGCCAATAAAGCCTGATGGTGCTGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACCAGAATGTTGAGTTAGCAGAGTTGGCTTTTGAACGTGTGGTTGAGCTTGAACCTGAAAACATAGGATACTATGTCTTATTATCGAACATCTATTCCGATGCGAACAATTCAAAAGGGGTTTTGAGGATTCGGGTTATGATGAAGAAGAGGAATTTGAAGAAGGATCCTGGATGTAGCCATGTTGAATTGAATGGCAGAGTTCATCCATTTGTGGTTGGGGATAGAAAACATCCCCAGGCTGAAGAGATATACAGAGTCTTAGATGAGTTAGAAGCATTAGTGCAGGAATTTGGAGGGCCTAAGAGAGATGAAAGCAACAAAGATTTGTTGACTGGAGCTGGTGGTGTTCATAGTGAAAAGTTGGCTGTTGCTTTTGGACTCTTGAATACCATGTCTGGGACAGAAATTGTGATCATAAAAAACCTTAGGATTTGTGAAGATTGTCACTTGTTTTTCAAGTTGGTTAGTAAAATCGTCCATCGTCAATTGACTGTTAGAGATGCAACTCGCTTCCACCATTTTAGAAATGGGAGCTGTTCTTGCAAAGATTATTGGTAGGATCATGGACTTGTTTGCTTTTGGTTAAATTATAAATTCAAAATTCACCCTTTCAAGAGTAGAAAATTGAAGGTTGACAGACGTTATTGTTATTTATTATTATTATTTTTTACTGTGAGTATTCAAGTCAATTTATGTAC

Coding sequence (CDS)

ATGACCGTTTTCTCTCCGCCATGGAACACTCAGCTCAGAGAATTAGCAAAACGCTGTCAATTCCTCCAAGCTCTGAATCTCTACTCCCAAATGCTCCGCCATGGCGATCGCCCCAACGCCTTCACTTTCCCCTTCGCTCTCAAATCATGCGCCGCTCTCTCGCGCCCAATCCTCGGCGCCCAACTCCATGGACAAATCATCAAACTTGGCTGTGAAGCTGAACCATTTGTGCAAACGGGTTTGATCTCTATGTACTGTAAAGGCTCTTCGGTTGAGAATGCCCGGAAAGTGTTCGACGAAAATCCCCAGTCAAGAAGACTTACTGTTTGCTACAATGCTTTGGTTTCCGGGTATGTTTTGAATTTGAAAATCTCCGATGCGGTTCTTTTGTTTCGCCGAATGAATGAAGTGGGTGTGTCTGTTAATTCGGTCACGTTGCTGGGTTTGATCCCAATTTGTGTTTCACCGATTAATTTGGAGCTTGGATCGTCTCTTCATGGTGCTACATTGAAATATGGATTGGATTCTGATGTCTCCGTTGTTAACTGCTTTATTACCATGTATATGAAATTTGGTTTGGTTAATTATGCACAAGAACTGTTTCATGAAATGCCCGAGAAGGGTTTGATTTCTTGGAACGCTATGATTTCTGGGTATGCACAAAATGGGCTGGCATCAAATGTTTTGGAGCTCTATTATAAAATGGAGTTGCATGGGGTTCATCCGGATCCTGTAACTTTTGTTGGGGTTTTGTCATCTTGTGCTAATCTTGGCGCTCAGAGTGTTGGTCGAGAGGTCGAGTTTAAGATCCAAGCTTGTTGGTTTGGCCAAAATCCGTTTCTAAGCAATTCTTTGATCAACATGTACGCCAGGTGCGGCAATTTAGCCAAGGCACGAGCTTTGTTCGATGAAATGCCGAAGAGAACATTAGTTTCATGGACAGCAATTATAGGTGGGTATGGAATGCATGGACATGGAGAAATTGCAGTGCAGCTTTTCGAGGAGATGATAAGCTGTGGCATTGTACCTGATGGAACTGCATTTGTTAGTGTCTTGTCTGCTTGTAGCCATGCAGGACTTACTGATCAGGGCTTGGAATATTTCAAGATGATGAGGACAAACTATCAATTGGAACCAGGTCCAGAGCATTATTCGTGCACGGTGGATCTTCTCGGACGAGCAGGGCGGTTAAATGAAGCTAGAAATCTCATTGAATCCATGCCAATAAAGCCTGATGGTGCTGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACCAGAATGTTGAGTTAGCAGAGTTGGCTTTTGAACGTGTGGTTGAGCTTGAACCTGAAAACATAGGATACTATGTCTTATTATCGAACATCTATTCCGATGCGAACAATTCAAAAGGGGTTTTGAGGATTCGGGTTATGATGAAGAAGAGGAATTTGAAGAAGGATCCTGGATGTAGCCATGTTGAATTGAATGGCAGAGTTCATCCATTTGTGGTTGGGGATAGAAAACATCCCCAGGCTGAAGAGATATACAGAGTCTTAGATGAGTTAGAAGCATTAGTGCAGGAATTTGGAGGGCCTAAGAGAGATGAAAGCAACAAAGATTTGTTGACTGGAGCTGGTGGTGTTCATAGTGAAAAGTTGGCTGTTGCTTTTGGACTCTTGAATACCATGTCTGGGACAGAAATTGTGATCATAAAAAACCTTAGGATTTGTGAAGATTGTCACTTGTTTTTCAAGTTGGTTAGTAAAATCGTCCATCGTCAATTGACTGTTAGAGATGCAACTCGCTTCCACCATTTTAGAAATGGGAGCTGTTCTTGCAAAGATTATTGGTAG

Protein sequence

MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSVVNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGVHPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARALFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKKDPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKRDESNKDLLTGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW

Homology

[Close]

BLAST of Sed0003272 vs. NCBI nr
Match: XP_022132717.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Momordica charantia])

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 530/616 (86.04%), Postives = 564/616 (91.56%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           MTV S PWNT+LRELAKRCQFLQALNLY QMLRHGDRPNAFTFPFALKSCAALS PILGA
Sbjct: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           QLHGQI+KLGCEAEPFVQT LISMYC+GS VE+ARKVFDEN QSRRLTVCYNAL+SGYVL
Sbjct: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLF +MNE GV VNSVTLLGLIP+C+SPINLELGSSLHG+TLKYGLDSDVSV
Sbjct: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK  +VN+AQ+LF EMP+KGLISWNAMISGYAQNGLA+NVL+LY+ MEL GV
Sbjct: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDPVT VGVLSSCANLGAQSVGREVE KIQA  FG+NPFL+N+LINMYARCGNLAKA+ 
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           LFDE P++TLVSWTAIIGGYG+HG GEIAVQLFEEMI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 LFDETPEKTLVSWTAIIGGYGIHGRGEIAVQLFEEMIGSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TD+GLEYFK M  NYQLEPGPEHYSC VDLLGRAGRLNEA+NLIESMP++PDGAVWGALL
Sbjct: 361 TDRGLEYFKTMGRNYQLEPGPEHYSCMVDLLGRAGRLNEAQNLIESMPMEPDGAVWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIHQNVELAELAFERVVELEP NIGYYVLLSNIYSD  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHQNVELAELAFERVVELEPANIGYYVLLSNIYSDTKNSKGVLRIRIMMKERRLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKRD-----ESNKDL 540
           DPGCS+VEL GRVHPFV GDR HPQ EEIYRVL+ELE LVQEFG PK+D     ESNK L
Sbjct: 481 DPGCSYVELKGRVHPFVAGDRSHPQVEEIYRVLEELETLVQEFGEPKKDDVDGEESNKKL 540

Query: 541 LTGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDAT 600
            TGA GVHSEKLAVAFGLLNT +G EIV+IKNLRICEDCHLFFKLVS IVHRQLTVRDAT
Sbjct: 541 FTGA-GVHSEKLAVAFGLLNTTAGMEIVVIKNLRICEDCHLFFKLVSNIVHRQLTVRDAT 600

Query: 601 RFHHFRNGSCSCKDYW 612
           RFHHFRNGSCSC DYW
Sbjct: 601 RFHHFRNGSCSCNDYW 615

[Close]

BLAST of Sed0003272 vs. NCBI nr
Match: KAG6604344.1 (putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 524/614 (85.34%), Postives = 560/614 (91.21%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           MT  S PWNTQLRELAKRCQFLQAL+LY+QMLRHGD PNAFTFPFALKSCAALS PILG 
Sbjct: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQIIK+GCE+EPFVQTGLISMYC+GS + NARKVFDE  QSR+LTVCYNAL+SGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLFR+MNE GV VNSVTLLGLIP+CVSPINLELG SLH +TLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVQVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VN+AQ LF EMPEKGLISWNAM+SGYAQNGLA+NVLELY+ MELHG+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDP T VGVLSSCANLGAQSVGREVE KIQA  F  N FL+N+LINMYARCGNL KA+A
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           LFDEMP+RTLVSWTAIIGGYGMHGHGEIAVQLFE+MI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           T QG+EYFKMM  NYQLEPGPEHYSC VDLLGRAGRLNEARNLIESMPI+PDGA+WGALL
Sbjct: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMPIEPDGAIWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIHQNV+LAELAFERVVELEP NIGYYVLLSNIY+D  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPK---RDESNKDLLT 540
           DPGCS+VEL GRVHPFVVGDR HPQAEEIYR+L+ELEALV EFG  K   R+ESNKDL  
Sbjct: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEELEALVHEFGEAKRADREESNKDLFA 540

Query: 541 GAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRF 600
           GA GVHSEKLAVAFGLLNT +GTE+V+IKNLRICEDCHLFFK+VSKIVHRQLTVRDATRF
Sbjct: 541 GAAGVHSEKLAVAFGLLNTTAGTEVVVIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 612
           HHFRNGSCSCKDYW
Sbjct: 601 HHFRNGSCSCKDYW 614

[Close]

BLAST of Sed0003272 vs. NCBI nr
Match: XP_023544808.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 526/614 (85.67%), Postives = 561/614 (91.37%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           MT  S PWNTQLRELAKRCQFLQAL+LY+QMLRHGD PNAFTFPFALKSCAALS PILG 
Sbjct: 1   MTALSTPWNTQLRELAKRCQFLQALSLYAQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQIIK+GCE+EPFVQTGLISMYC+GS + NARKVFDE  QSR+LTVCYNAL+SGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLFR+MNE GV VNSVTLLGLIP+CVSPINLELG SLH +TLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VN+AQ LF +MPEKGLISWNAM+SGYAQNGLA+NVLELY+ MELHG+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDKMPEKGLISWNAMVSGYAQNGLATNVLELYHNMELHGI 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDP T VGVLSSCANLGAQSVGREVE KIQA  F  N FL+N+LINMYARCGNL KA+A
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           LFDEMP+RTLVSWTAIIGGYGMHGHGEIAVQLFE+MI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           T QG+EYFKMM  NYQLEPGPEHYSC VDLLGRAGRLNEARNLIESMPI+PDGAVWGALL
Sbjct: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMPIEPDGAVWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIHQNV+LAELAFERVVELEP NIGYYVLLSNIY+D  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPK---RDESNKDLLT 540
           DPGCS+VEL GRVHPFVVGDR HPQAEEIYRVL+ELEALV EFG  K   R+ESNKDL T
Sbjct: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRVLEELEALVHEFGEAKRADREESNKDLFT 540

Query: 541 GAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRF 600
           GA GVHSEKLAVAFGLLNT +GTE+V+IKNLRICEDCHLFFK+VSKIVHRQLTVRDATRF
Sbjct: 541 GA-GVHSEKLAVAFGLLNTTAGTEVVVIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 612
           HHFRNGSCSCKDYW
Sbjct: 601 HHFRNGSCSCKDYW 613

[Close]

BLAST of Sed0003272 vs. NCBI nr
Match: XP_022977443.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 522/614 (85.02%), Postives = 558/614 (90.88%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           MT  S PWNT+LRELAKRCQFLQAL+LY+QMLRHGD PNAFTFPFALKSCAALS PILG 
Sbjct: 1   MTALSMPWNTRLRELAKRCQFLQALSLYAQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQIIK+GCE+EPFVQTGL+SMYC+GS + NARKVFDE  QSR+LTVCYNAL+SGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLLSMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLFR+MNE GV VNSVTLL LIP+CVSPINLELG SLH +TLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLSLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VN+AQ LF EMPEKGLISWNAM+SGYAQNGLA+NVLELY+ MELHG+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLATNVLELYHNMELHGI 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDP T VGVLSSCANLGAQSVGREVE KIQA  F  N FL+N+LINMYARCGNL KA+A
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           LFDEMP+RTLVSWTAIIGGYGMHGHGEIAVQLFE+MI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           T QG+EYFKMM  NYQLEPGPEHYSC VDLLGRAGRLNEARNLIESM I+PDGAVWGALL
Sbjct: 361 TSQGMEYFKMMGGNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIHQNV+LAELAFERVVELEP NIGYYVLLSNIY+D  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPK---RDESNKDLLT 540
           DPGCS+VEL GRVHPFVVGDR HPQAEEIY VL+ELEALVQEFG  K   R+ESNKDL  
Sbjct: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYSVLEELEALVQEFGEAKRADREESNKDLFA 540

Query: 541 GAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRF 600
           GA GVHSEKLAVAFGLLNT +GTE+V+IKNLRICEDCHLFFK+VSKIVHRQLTVRDATRF
Sbjct: 541 GAAGVHSEKLAVAFGLLNTTAGTEVVVIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 612
           HHFRNGSCSCKDYW
Sbjct: 601 HHFRNGSCSCKDYW 614

[Close]

BLAST of Sed0003272 vs. NCBI nr
Match: XP_038882846.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Benincasa hispida])

HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 522/614 (85.02%), Postives = 558/614 (90.88%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           M   S PWNTQ+RELAKRCQFLQ L LY QMLRHGDRPNAFTFPFALKSCAALS P LG 
Sbjct: 1   MNALSTPWNTQIRELAKRCQFLQVLILYPQMLRHGDRPNAFTFPFALKSCAALSLPRLGE 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQIIK+GCE EPFVQTGLISMYC+GSSVENARKVF+EN  S+ LTVCYNAL+SGYV 
Sbjct: 61  QFHGQIIKVGCEFEPFVQTGLISMYCRGSSVENARKVFNENSHSKMLTVCYNALISGYVS 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDA+LLFR+MNE  V VNSVTLLGLIP+CVSPINLELG SLHG TLKYGLD DVSV
Sbjct: 121 NSKCSDAILLFRQMNEESVPVNSVTLLGLIPVCVSPINLELGLSLHGFTLKYGLDLDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VNYAQ+LF EMP KGLISWNAM+SGYAQNG+A+NVLELY+ M+ HGV
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGMATNVLELYHNMDKHGV 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDPVT VGVLSSCANLGAQ VG EVEFKIQA  F  NPFL+N+LINMYARCGNL KA+A
Sbjct: 241 HPDPVTLVGVLSSCANLGAQGVGHEVEFKIQASGFTNNPFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           +FDEMP+RTLVSWTAIIGGYGMHGHGEIAVQLFEEMI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 VFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEEMIRSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TDQGLEYFKM++ NYQLEPGPEHYSC VDLLGRAGRLNEARNLIESMPIKPDGAVWGALL
Sbjct: 361 TDQGLEYFKMIKRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIH+NVELAELAFERV+ELEPENIGYYVLLSNIYS+  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNTMNSKGVLRIRIMMKERKLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKRD---ESNKDLLT 540
           +PGCS+VEL GRVHPFVVGDR HPQAEEIYRVL+ELEALVQEFG PK+D   ES  + +T
Sbjct: 481 NPGCSYVELKGRVHPFVVGDRNHPQAEEIYRVLEELEALVQEFGEPKKDYGEESKGEFIT 540

Query: 541 GAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRF 600
           G  GVHSEKLAVAFGLLNTM+GTE+VIIKNLRICEDCHLFFK+VSKIVHRQLTVRDATRF
Sbjct: 541 GV-GVHSEKLAVAFGLLNTMAGTEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 612
           HHFRNGSCSCKDYW
Sbjct: 601 HHFRNGSCSCKDYW 613

[Close]

BLAST of Sed0003272 vs. ExPASy Swiss-Prot
Match: Q9CAY1 (Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=1 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 1.1e-230
Identity = 384/609 (63.05%), Postives = 475/609 (78.00%), Query Frame = 0


Query: 3   VFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQL 62
           V S PWN +LRELA +  F ++++LY  MLR G  P+AF+FPF LKSCA+LS P+ G QL
Sbjct: 16  VASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75

Query: 63  HGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNL 122
           H  + K GCE EPFV T LISMYCK   V +ARKVF+ENPQS +L+VCYNAL+SGY  N 
Sbjct: 76  HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135

Query: 123 KISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSVVN 182
           K++DA  +FRRM E GVSV+SVT+LGL+P+C  P  L LG SLHG  +K GLDS+V+V+N
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195

Query: 183 CFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGVHP 242
            FITMYMK G V   + LF EMP KGLI+WNA+ISGY+QNGLA +VLELY +M+  GV P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255

Query: 243 DPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARALF 302
           DP T V VLSSCA+LGA+ +G EV   +++  F  N F+SN+ I+MYARCGNLAKARA+F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315

Query: 303 DEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGLTD 362
           D MP ++LVSWTA+IG YGMHG GEI + LF++MI  GI PDG  FV VLSACSH+GLTD
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375

Query: 363 QGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGA 422
           +GLE F+ M+  Y+LEPGPEHYSC VDLLGRAGRL+EA   IESMP++PDGAVWGALLGA
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435

Query: 423 CKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKKDP 482
           CKIH+NV++AELAF +V+E EP NIGYYVL+SNIYSD+ N +G+ RIRVMM++R  +K P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495

Query: 483 GCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKRDESNKDLLTGAGGV 542
           G S+VE  GRVH F+ GDR H Q EE++R+LDELE  V E  G   D    + ++     
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG-NMDCDRGEEVSSTTRE 555

Query: 543 HSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRFHHFRN 602
           HSE+LA+AFG+LN++ GTEI++IKNLR+CEDCH+F K VSKIV RQ  VRDA+RFH+F++
Sbjct: 556 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 615

Query: 603 GSCSCKDYW 612
           G CSCKDYW
Sbjct: 616 GVCSCKDYW 623

[Close]

BLAST of Sed0003272 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 5.1e-140
Identity = 255/640 (39.84%), Postives = 371/640 (57.97%), Query Frame = 0


Query: 8   WNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQLHGQII 67
           WNT  R  A     + AL LY  M+  G  PN++TFPF LKSCA       G Q+HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KLGCEAEPFVQTGLISMYCKGSSVENARKVFDENP---------------------QSRR 127
           KLGC+ + +V T LISMY +   +E+A KVFD++P                      +++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 L--------TVCYNALVSGYVLNLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPIN 187
           L         V +NA++SGY       +A+ LF+ M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGSSLHGATLKYGLDSDVSVVNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISG 247
           +ELG  +H     +G  S++ +VN  I +Y K G +  A  LF  +P K +ISWN +I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGLASNVLELYYKMELHGVHPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFG-- 307
           Y    L    L L+ +M   G  P+ VT + +L +CA+LGA  +GR +   I     G  
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 QNPFLSNSLINMYARCGNLAKARALFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEM 367
               L  SLI+MYA+CG++  A  +F+ +  ++L SW A+I G+ MHG  + +  LF  M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461

Query: 368 ISCGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGR 427
              GI PD   FV +LSACSH+G+ D G   F+ M  +Y++ P  EHY C +DLLG +G 
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521

Query: 428 LNEARNLIESMPIKPDGAVWGALLGACKIHQNVELAELAFERVVELEPENIGYYVLLSNI 487
             EA  +I  M ++PDG +W +LL ACK+H NVEL E   E ++++EPEN G YVLLSNI
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581

Query: 488 YSDANNSKGVLRIRVMMKKRNLKKDPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDEL 547
           Y+ A     V + R ++  + +KK PGCS +E++  VH F++GD+ HP+  EIY +L+E+
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641

Query: 548 EALVQEFG-----GPKRDESNKDLLTGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRIC 607
           E L+++ G          E  ++   GA   HSEKLA+AFGL++T  GT++ I+KNLR+C
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 701

Query: 608 EDCHLFFKLVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 612
            +CH   KL+SKI  R++  RD TRFHHFR+G CSC DYW
Sbjct: 702 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of Sed0003272 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.8e-137
Identity = 255/613 (41.60%), Postives = 363/613 (59.22%), Query Frame = 0


Query: 8   WNTQLRELAKRCQFLQALNLYSQMLRHG-DRPNAFTFPFALKSCAALSRPILGAQLHGQI 67
           WNT +    K   +++++ ++  ++     R +  T    L + A L    LG Q+H   
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247

Query: 68  IKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNLKISD 127
            K GC +  +V TG IS+Y K   ++    +F E  +     V YNA++ GY  N +   
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD--IVAYNAMIHGYTSNGETEL 307

Query: 128 AVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSVVNCFIT 187
           ++ LF+ +   G  + S TL+ L+P+     +L L  ++HG  LK    S  SV     T
Sbjct: 308 SLSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTT 367

Query: 188 MYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGVHPDPVT 247
           +Y K   +  A++LF E PEK L SWNAMISGY QNGL  + + L+ +M+     P+PVT
Sbjct: 368 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 427

Query: 248 FVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARALFDEMP 307
              +LS+CA LGA S+G+ V   +++  F  + ++S +LI MYA+CG++A+AR LFD M 
Sbjct: 428 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 487

Query: 308 KRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGLTDQGLE 367
           K+  V+W  +I GYG+HG G+ A+ +F EM++ GI P    F+ VL ACSHAGL  +G E
Sbjct: 488 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 547

Query: 368 YFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 427
            F  M   Y  EP  +HY+C VD+LGRAG L  A   IE+M I+P  +VW  LLGAC+IH
Sbjct: 548 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 607

Query: 428 QNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKKDPGCSH 487
           ++  LA    E++ EL+P+N+GY+VLLSNI+S   N      +R   KKR L K PG + 
Sbjct: 608 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 667

Query: 488 VELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKR--------DESNKDLLTG 547
           +E+    H F  GD+ HPQ +EIY  L++LE  ++E G            +E  ++L+  
Sbjct: 668 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMV- 727

Query: 548 AGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRFH 607
              VHSE+LA+AFGL+ T  GTEI IIKNLR+C DCH   KL+SKI  R + VRDA RFH
Sbjct: 728 --KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFH 787

Query: 608 HFRNGSCSCKDYW 612
           HF++G CSC DYW
Sbjct: 788 HFKDGVCSCGDYW 792

[Close]

BLAST of Sed0003272 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 4.0e-137
Identity = 259/626 (41.37%), Postives = 383/626 (61.18%), Query Frame = 0


Query: 3   VFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQL 62
           VFS  WN+ + +LA+     +AL  +S M +    P   +FP A+K+C++L     G Q 
Sbjct: 41  VFS--WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 100

Query: 63  HGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNL 122
           H Q    G +++ FV + LI MY     +E+ARKVFDE P  +R  V + +++ GY LN 
Sbjct: 101 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSWTSMIRGYDLNG 160

Query: 123 KISDAVLLFRRM------NEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDS 182
              DAV LF+ +      ++  + ++S+ L+ +I  C       L  S+H   +K G D 
Sbjct: 161 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 220

Query: 183 DVSVVNCFITMYMKFGL--VNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYK 242
            VSV N  +  Y K G   V  A+++F ++ +K  +S+N+++S YAQ+G+++   E++ +
Sbjct: 221 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 280

Query: 243 MELHGVHP-DPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCG 302
           +  + V   + +T   VL + ++ GA  +G+ +  ++       +  +  S+I+MY +CG
Sbjct: 281 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 340

Query: 303 NLAKARALFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLS 362
            +  AR  FD M  + + SWTA+I GYGMHGH   A++LF  MI  G+ P+   FVSVL+
Sbjct: 341 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 400

Query: 363 ACSHAGLTDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDG 422
           ACSHAGL  +G  +F  M+  + +EPG EHY C VDLLGRAG L +A +LI+ M +KPD 
Sbjct: 401 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 460

Query: 423 AVWGALLGACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMM 482
            +W +LL AC+IH+NVELAE++  R+ EL+  N GYY+LLS+IY+DA   K V R+R++M
Sbjct: 461 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 520

Query: 483 KKRNLKKDPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKR----- 542
           K R L K PG S +ELNG VH F++GD +HPQ E+IY  L EL   + E G         
Sbjct: 521 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVC 580

Query: 543 ---DESNKDLLTGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIV 602
              DE  K++      VHSEKLA+AFG++NT+ G+ + ++KNLR+C DCH   KL+SKIV
Sbjct: 581 HDVDEEEKEMTL---RVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 640

Query: 603 HRQLTVRDATRFHHFRNGSCSCKDYW 612
            R+  VRDA RFHHF++G CSC DYW
Sbjct: 641 DREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]

BLAST of Sed0003272 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 8.9e-137
Identity = 250/613 (40.78%), Postives = 372/613 (60.69%), Query Frame = 0


Query: 8   WNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQLHGQII 67
           WNT +   ++      AL +   M     +P+  T    L + +AL    +G ++HG  +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263

Query: 68  KLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNLKISDA 127
           + G ++   + T L+ MY K  S+E AR++FD      R  V +N+++  YV N    +A
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSWNSMIDAYVQNENPKEA 323

Query: 128 VLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSVVNCFITM 187
           +L+F++M + GV    V+++G +  C    +LE G  +H  +++ GLD +VSVVN  I+M
Sbjct: 324 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 383

Query: 188 YMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGVHPDPVTF 247
           Y K   V+ A  +F ++  + L+SWNAMI G+AQNG   + L  + +M    V PD  T+
Sbjct: 384 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 443

Query: 248 VGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARALFDEMPK 307
           V V+++ A L      + +   +      +N F++ +L++MYA+CG +  AR +FD M +
Sbjct: 444 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 503

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGLTDQGLEY 367
           R + +W A+I GYG HG G+ A++LFEEM    I P+G  F+SV+SACSH+GL + GL+ 
Sbjct: 504 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 563

Query: 368 FKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHQ 427
           F MM+ NY +E   +HY   VDLLGRAGRLNEA + I  MP+KP   V+GA+LGAC+IH+
Sbjct: 564 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 623

Query: 428 NVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKKDPGCSHV 487
           NV  AE A ER+ EL P++ GY+VLL+NIY  A+  + V ++RV M ++ L+K PGCS V
Sbjct: 624 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 683

Query: 488 ELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFG---------GPKRDESNKDLLTG 547
           E+   VH F  G   HP +++IY  L++L   ++E G         G + D   + L T 
Sbjct: 684 EIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLST- 743

Query: 548 AGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRFH 607
               HSEKLA++FGLLNT +GT I + KNLR+C DCH   K +S +  R++ VRD  RFH
Sbjct: 744 ----HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFH 803

Query: 608 HFRNGSCSCKDYW 612
           HF+NG+CSC DYW
Sbjct: 804 HFKNGACSCGDYW 809

[Close]

BLAST of Sed0003272 vs. ExPASy TrEMBL
Match: A0A6J1BUL8 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005513 PE=3 SV=1)

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 530/616 (86.04%), Postives = 564/616 (91.56%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           MTV S PWNT+LRELAKRCQFLQALNLY QMLRHGDRPNAFTFPFALKSCAALS PILGA
Sbjct: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           QLHGQI+KLGCEAEPFVQT LISMYC+GS VE+ARKVFDEN QSRRLTVCYNAL+SGYVL
Sbjct: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLF +MNE GV VNSVTLLGLIP+C+SPINLELGSSLHG+TLKYGLDSDVSV
Sbjct: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK  +VN+AQ+LF EMP+KGLISWNAMISGYAQNGLA+NVL+LY+ MEL GV
Sbjct: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDPVT VGVLSSCANLGAQSVGREVE KIQA  FG+NPFL+N+LINMYARCGNLAKA+ 
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           LFDE P++TLVSWTAIIGGYG+HG GEIAVQLFEEMI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 LFDETPEKTLVSWTAIIGGYGIHGRGEIAVQLFEEMIGSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TD+GLEYFK M  NYQLEPGPEHYSC VDLLGRAGRLNEA+NLIESMP++PDGAVWGALL
Sbjct: 361 TDRGLEYFKTMGRNYQLEPGPEHYSCMVDLLGRAGRLNEAQNLIESMPMEPDGAVWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIHQNVELAELAFERVVELEP NIGYYVLLSNIYSD  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHQNVELAELAFERVVELEPANIGYYVLLSNIYSDTKNSKGVLRIRIMMKERRLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKRD-----ESNKDL 540
           DPGCS+VEL GRVHPFV GDR HPQ EEIYRVL+ELE LVQEFG PK+D     ESNK L
Sbjct: 481 DPGCSYVELKGRVHPFVAGDRSHPQVEEIYRVLEELETLVQEFGEPKKDDVDGEESNKKL 540

Query: 541 LTGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDAT 600
            TGA GVHSEKLAVAFGLLNT +G EIV+IKNLRICEDCHLFFKLVS IVHRQLTVRDAT
Sbjct: 541 FTGA-GVHSEKLAVAFGLLNTTAGMEIVVIKNLRICEDCHLFFKLVSNIVHRQLTVRDAT 600

Query: 601 RFHHFRNGSCSCKDYW 612
           RFHHFRNGSCSC DYW
Sbjct: 601 RFHHFRNGSCSCNDYW 615

[Close]

BLAST of Sed0003272 vs. ExPASy TrEMBL
Match: A0A6J1IQ02 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477787 PE=3 SV=1)

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 522/614 (85.02%), Postives = 558/614 (90.88%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           MT  S PWNT+LRELAKRCQFLQAL+LY+QMLRHGD PNAFTFPFALKSCAALS PILG 
Sbjct: 1   MTALSMPWNTRLRELAKRCQFLQALSLYAQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQIIK+GCE+EPFVQTGL+SMYC+GS + NARKVFDE  QSR+LTVCYNAL+SGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLLSMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLFR+MNE GV VNSVTLL LIP+CVSPINLELG SLH +TLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLSLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VN+AQ LF EMPEKGLISWNAM+SGYAQNGLA+NVLELY+ MELHG+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLATNVLELYHNMELHGI 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDP T VGVLSSCANLGAQSVGREVE KIQA  F  N FL+N+LINMYARCGNL KA+A
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           LFDEMP+RTLVSWTAIIGGYGMHGHGEIAVQLFE+MI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           T QG+EYFKMM  NYQLEPGPEHYSC VDLLGRAGRLNEARNLIESM I+PDGAVWGALL
Sbjct: 361 TSQGMEYFKMMGGNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIHQNV+LAELAFERVVELEP NIGYYVLLSNIY+D  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPK---RDESNKDLLT 540
           DPGCS+VEL GRVHPFVVGDR HPQAEEIY VL+ELEALVQEFG  K   R+ESNKDL  
Sbjct: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYSVLEELEALVQEFGEAKRADREESNKDLFA 540

Query: 541 GAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRF 600
           GA GVHSEKLAVAFGLLNT +GTE+V+IKNLRICEDCHLFFK+VSKIVHRQLTVRDATRF
Sbjct: 541 GAAGVHSEKLAVAFGLLNTTAGTEVVVIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 612
           HHFRNGSCSCKDYW
Sbjct: 601 HHFRNGSCSCKDYW 614

[Close]

BLAST of Sed0003272 vs. ExPASy TrEMBL
Match: A0A6J1EDM7 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111433216 PE=3 SV=1)

HSP 1 Score: 1074.7 bits (2778), Expect = 2.3e-310
Identity = 524/614 (85.34%), Postives = 558/614 (90.88%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           MT  S PWNTQLRELAKRCQFLQAL+LY+QMLRHGD PNAFTFPFALKSCAALS PILG 
Sbjct: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQIIK+GCE+EPFVQTGLISMYC+GS + NARKVFDE  QSR+LTVCYNAL+SGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLFR+MNE GV VNSVTLLGLIP+CVSPINLELG SLH +TLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VN+AQ LF EMPEKGLISWNAM+SGYAQNGLA+NVLELY+ MELHG+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDP T VGVLSSCANLGAQSVGREVE KIQA  F  N FL+N+LINMYARCGNL KA+A
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           LFDEMP+RTLVSWTAIIGGYGMHGHGEIAVQLFE+MI  GIVPDGTAFVSVLSACSHAGL
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEIAVQLFEDMIRSGIVPDGTAFVSVLSACSHAGL 360

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           T QG+EYFKMM  NYQLEPGPEHYSC VDLLGRAGRLNEARNLIESM I+PDGAVWGALL
Sbjct: 361 TSQGMEYFKMMGRNYQLEPGPEHYSCMVDLLGRAGRLNEARNLIESMAIEPDGAVWGALL 420

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIHQNV+LAELAFERVVELEP NIGYYVLLSNIY+D  NSKGVLRIR+MMK+R LKK
Sbjct: 421 GACKIHQNVKLAELAFERVVELEPANIGYYVLLSNIYNDTKNSKGVLRIRIMMKERKLKK 480

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPK---RDESNKDLLT 540
           DPGCS+VEL GRVHPFVVGDR HPQAEEIYR+L+EL ALV EFG  K   R+ESNKDL  
Sbjct: 481 DPGCSYVELKGRVHPFVVGDRSHPQAEEIYRLLEEL-ALVHEFGEAKRADREESNKDLFA 540

Query: 541 GAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRF 600
           GA GVHSEKLAVAFGLLNT +GTE+VIIKNLRICEDCHLFFK+VSKIVHRQLTVRDATRF
Sbjct: 541 GAAGVHSEKLAVAFGLLNTTAGTEVVIIKNLRICEDCHLFFKIVSKIVHRQLTVRDATRF 600

Query: 601 HHFRNGSCSCKDYW 612
           HHFRNGSCSCKDYW
Sbjct: 601 HHFRNGSCSCKDYW 613

[Close]

BLAST of Sed0003272 vs. ExPASy TrEMBL
Match: A0A0A0KFC9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G452690 PE=3 SV=1)

HSP 1 Score: 1053.1 bits (2722), Expect = 4.4e-304
Identity = 515/615 (83.74%), Postives = 556/615 (90.41%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           M   S PWNTQLRELAKRCQFLQAL+LY QMLRHGDRPNAFTFPFALKSCAALS PILG+
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 69

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQI K+GC  EPFVQTGLISMYCKGS V+NARKVF+EN  SR+LTVCYNALVSGYV 
Sbjct: 70  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K S+AVLLFR+MNE GV VNSVTLLGLIP CVSPINLELGSSLH +TLKYG DSDVSV
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VNYAQ+LF EMP KGLISWNAM+SGYAQNGLA+NVLELY  M+++GV
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
           HPDPVT VGVLSSCANLGAQSVG EVEFKIQA  F  NPFL+N+LINMYARCGNL KA+A
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           +FD MP+RTLVSWTAIIGGYGMHGHGEIAVQLF+EMI  GI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TDQGLEYFKMM+ NYQLEPGPEHYSC VDLLGRAGRL EA+ LIESMPIKPDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIH+NVELAELAFERV+ELEPENIGYYVLLSNIYS+ANNSKGVLRIR+MMK++ LKK
Sbjct: 430 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALV-QEFGGPKRD---ESNKDLL 540
           DPGCS+VEL GRVHPF+VGDR H Q++EIYRVL+ELEA++ QEFG P++D   ESNKD  
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGF 549

Query: 541 TGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATR 600
           T   GVHSEKLAVAFGLLNT +G E+VIIKNLRICEDCHLFFK+VSKIVHRQLTVRDATR
Sbjct: 550 TRV-GVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATR 609

Query: 601 FHHFRNGSCSCKDYW 612
           FHHFRNGSCSCKDYW
Sbjct: 610 FHHFRNGSCSCKDYW 623

[Close]

BLAST of Sed0003272 vs. ExPASy TrEMBL
Match: A0A1S3CH87 (putative pentatricopeptide repeat-containing protein At3g11460 OS=Cucumis melo OX=3656 GN=LOC103500905 PE=3 SV=1)

HSP 1 Score: 1050.4 bits (2715), Expect = 2.8e-303
Identity = 511/615 (83.09%), Postives = 552/615 (89.76%), Query Frame = 0


Query: 1   MTVFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGA 60
           M   S PWNTQLRELAKRCQFLQAL+LY QMLRHGDRPNAFTFPFALKSCAALS PILG 
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSHPILGG 69

Query: 61  QLHGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVL 120
           Q HGQIIK+GC  EPFVQTGLISMYCKGS VENARKVFDEN  SR+LTVCYNAL+SGY  
Sbjct: 70  QFHGQIIKVGCIFEPFVQTGLISMYCKGSLVENARKVFDENFHSRKLTVCYNALISGYAS 129

Query: 121 NLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSV 180
           N K SDAVLLFR+MNE G+ VNSVTLLGLIP CVSPINLELGSSLH +TLKYG DS+VSV
Sbjct: 130 NSKCSDAVLLFRQMNEEGIPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSEVSV 189

Query: 181 VNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGV 240
           VNCFITMYMK G VNYAQ+LF EMP KGLISWNAM+SGYAQNGLA+NVLELY  M+++GV
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 HPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARA 300
            PDP+T VGVLSSCANLGAQSVG  VEFKIQA  F  NPFL+N+LINMYARCGNL KA++
Sbjct: 250 RPDPITLVGVLSSCANLGAQSVGHAVEFKIQASGFTNNPFLNNALINMYARCGNLTKAQS 309

Query: 301 LFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGL 360
           +FD MP+RTLVSWTAIIGGYGMHGHGEIAVQLF+EMI  GI PDGTAFV VLSACSHAGL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 361 TDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALL 420
           TDQGLEYFKMM+ NY+LEPG EHYSC VDLLGRAGRL EA+NLIESMPIKPDGAVWGALL
Sbjct: 370 TDQGLEYFKMMKRNYRLEPGQEHYSCMVDLLGRAGRLKEAQNLIESMPIKPDGAVWGALL 429

Query: 421 GACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKK 480
           GACKIH+NVELAELAFERV+E EPENIGYYVLLSNIYSDANNSKGVLRIR+MMK++ LKK
Sbjct: 430 GACKIHKNVELAELAFERVIEHEPENIGYYVLLSNIYSDANNSKGVLRIRIMMKEKKLKK 489

Query: 481 DPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALV-QEFGGPKRD---ESNKDLL 540
           DPGCS+VEL GRVHPF+VGDR HPQ++EIYRVL+ELEA++ QEFG PK+D   ESNKD  
Sbjct: 490 DPGCSYVELKGRVHPFIVGDRNHPQSDEIYRVLEELEAIIMQEFGKPKKDNREESNKDFF 549

Query: 541 TGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATR 600
           TG  GVHSEKLAVAFGLLNT +G E+VIIKNLRICEDCHLFFK+VSKI  RQLTVRDATR
Sbjct: 550 TGV-GVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIADRQLTVRDATR 609

Query: 601 FHHFRNGSCSCKDYW 612
           FHHFRNGSCSCKDYW
Sbjct: 610 FHHFRNGSCSCKDYW 623

[Close]

BLAST of Sed0003272 vs. TAIR 10
Match: AT3G11460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 800.8 bits (2067), Expect = 7.5e-232
Identity = 384/609 (63.05%), Postives = 475/609 (78.00%), Query Frame = 0


Query: 3   VFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQL 62
           V S PWN +LRELA +  F ++++LY  MLR G  P+AF+FPF LKSCA+LS P+ G QL
Sbjct: 16  VASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75

Query: 63  HGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNL 122
           H  + K GCE EPFV T LISMYCK   V +ARKVF+ENPQS +L+VCYNAL+SGY  N 
Sbjct: 76  HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135

Query: 123 KISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSVVN 182
           K++DA  +FRRM E GVSV+SVT+LGL+P+C  P  L LG SLHG  +K GLDS+V+V+N
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195

Query: 183 CFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGVHP 242
            FITMYMK G V   + LF EMP KGLI+WNA+ISGY+QNGLA +VLELY +M+  GV P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255

Query: 243 DPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARALF 302
           DP T V VLSSCA+LGA+ +G EV   +++  F  N F+SN+ I+MYARCGNLAKARA+F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315

Query: 303 DEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGLTD 362
           D MP ++LVSWTA+IG YGMHG GEI + LF++MI  GI PDG  FV VLSACSH+GLTD
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375

Query: 363 QGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGA 422
           +GLE F+ M+  Y+LEPGPEHYSC VDLLGRAGRL+EA   IESMP++PDGAVWGALLGA
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435

Query: 423 CKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKKDP 482
           CKIH+NV++AELAF +V+E EP NIGYYVL+SNIYSD+ N +G+ RIRVMM++R  +K P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495

Query: 483 GCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKRDESNKDLLTGAGGV 542
           G S+VE  GRVH F+ GDR H Q EE++R+LDELE  V E  G   D    + ++     
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG-NMDCDRGEEVSSTTRE 555

Query: 543 HSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRFHHFRN 602
           HSE+LA+AFG+LN++ GTEI++IKNLR+CEDCH+F K VSKIV RQ  VRDA+RFH+F++
Sbjct: 556 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 615

Query: 603 GSCSCKDYW 612
           G CSCKDYW
Sbjct: 616 GVCSCKDYW 623

[Close]

BLAST of Sed0003272 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 499.6 bits (1285), Expect = 3.6e-141
Identity = 255/640 (39.84%), Postives = 371/640 (57.97%), Query Frame = 0


Query: 8   WNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQLHGQII 67
           WNT  R  A     + AL LY  M+  G  PN++TFPF LKSCA       G Q+HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KLGCEAEPFVQTGLISMYCKGSSVENARKVFDENP---------------------QSRR 127
           KLGC+ + +V T LISMY +   +E+A KVFD++P                      +++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 L--------TVCYNALVSGYVLNLKISDAVLLFRRMNEVGVSVNSVTLLGLIPICVSPIN 187
           L         V +NA++SGY       +A+ LF+ M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGSSLHGATLKYGLDSDVSVVNCFITMYMKFGLVNYAQELFHEMPEKGLISWNAMISG 247
           +ELG  +H     +G  S++ +VN  I +Y K G +  A  LF  +P K +ISWN +I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGLASNVLELYYKMELHGVHPDPVTFVGVLSSCANLGAQSVGREVEFKIQACWFG-- 307
           Y    L    L L+ +M   G  P+ VT + +L +CA+LGA  +GR +   I     G  
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 QNPFLSNSLINMYARCGNLAKARALFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEM 367
               L  SLI+MYA+CG++  A  +F+ +  ++L SW A+I G+ MHG  + +  LF  M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461

Query: 368 ISCGIVPDGTAFVSVLSACSHAGLTDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGR 427
              GI PD   FV +LSACSH+G+ D G   F+ M  +Y++ P  EHY C +DLLG +G 
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521

Query: 428 LNEARNLIESMPIKPDGAVWGALLGACKIHQNVELAELAFERVVELEPENIGYYVLLSNI 487
             EA  +I  M ++PDG +W +LL ACK+H NVEL E   E ++++EPEN G YVLLSNI
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581

Query: 488 YSDANNSKGVLRIRVMMKKRNLKKDPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDEL 547
           Y+ A     V + R ++  + +KK PGCS +E++  VH F++GD+ HP+  EIY +L+E+
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641

Query: 548 EALVQEFG-----GPKRDESNKDLLTGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRIC 607
           E L+++ G          E  ++   GA   HSEKLA+AFGL++T  GT++ I+KNLR+C
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 701

Query: 608 EDCHLFFKLVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 612
            +CH   KL+SKI  R++  RD TRFHHFR+G CSC DYW
Sbjct: 702 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of Sed0003272 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 491.1 bits (1263), Expect = 1.3e-138
Identity = 255/613 (41.60%), Postives = 363/613 (59.22%), Query Frame = 0


Query: 8   WNTQLRELAKRCQFLQALNLYSQMLRHG-DRPNAFTFPFALKSCAALSRPILGAQLHGQI 67
           WNT +    K   +++++ ++  ++     R +  T    L + A L    LG Q+H   
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247

Query: 68  IKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNLKISD 127
            K GC +  +V TG IS+Y K   ++    +F E  +     V YNA++ GY  N +   
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD--IVAYNAMIHGYTSNGETEL 307

Query: 128 AVLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSVVNCFIT 187
           ++ LF+ +   G  + S TL+ L+P+     +L L  ++HG  LK    S  SV     T
Sbjct: 308 SLSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTT 367

Query: 188 MYMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGVHPDPVT 247
           +Y K   +  A++LF E PEK L SWNAMISGY QNGL  + + L+ +M+     P+PVT
Sbjct: 368 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 427

Query: 248 FVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARALFDEMP 307
              +LS+CA LGA S+G+ V   +++  F  + ++S +LI MYA+CG++A+AR LFD M 
Sbjct: 428 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 487

Query: 308 KRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGLTDQGLE 367
           K+  V+W  +I GYG+HG G+ A+ +F EM++ GI P    F+ VL ACSHAGL  +G E
Sbjct: 488 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 547

Query: 368 YFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIH 427
            F  M   Y  EP  +HY+C VD+LGRAG L  A   IE+M I+P  +VW  LLGAC+IH
Sbjct: 548 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 607

Query: 428 QNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKKDPGCSH 487
           ++  LA    E++ EL+P+N+GY+VLLSNI+S   N      +R   KKR L K PG + 
Sbjct: 608 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 667

Query: 488 VELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKR--------DESNKDLLTG 547
           +E+    H F  GD+ HPQ +EIY  L++LE  ++E G            +E  ++L+  
Sbjct: 668 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMV- 727

Query: 548 AGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRFH 607
              VHSE+LA+AFGL+ T  GTEI IIKNLR+C DCH   KL+SKI  R + VRDA RFH
Sbjct: 728 --KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFH 787

Query: 608 HFRNGSCSCKDYW 612
           HF++G CSC DYW
Sbjct: 788 HFKDGVCSCGDYW 792

[Close]

BLAST of Sed0003272 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 490.0 bits (1260), Expect = 2.8e-138
Identity = 259/626 (41.37%), Postives = 383/626 (61.18%), Query Frame = 0


Query: 3   VFSPPWNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQL 62
           VFS  WN+ + +LA+     +AL  +S M +    P   +FP A+K+C++L     G Q 
Sbjct: 41  VFS--WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 100

Query: 63  HGQIIKLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNL 122
           H Q    G +++ FV + LI MY     +E+ARKVFDE P  +R  V + +++ GY LN 
Sbjct: 101 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSWTSMIRGYDLNG 160

Query: 123 KISDAVLLFRRM------NEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDS 182
              DAV LF+ +      ++  + ++S+ L+ +I  C       L  S+H   +K G D 
Sbjct: 161 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 220

Query: 183 DVSVVNCFITMYMKFGL--VNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYK 242
            VSV N  +  Y K G   V  A+++F ++ +K  +S+N+++S YAQ+G+++   E++ +
Sbjct: 221 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 280

Query: 243 MELHGVHP-DPVTFVGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCG 302
           +  + V   + +T   VL + ++ GA  +G+ +  ++       +  +  S+I+MY +CG
Sbjct: 281 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 340

Query: 303 NLAKARALFDEMPKRTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLS 362
            +  AR  FD M  + + SWTA+I GYGMHGH   A++LF  MI  G+ P+   FVSVL+
Sbjct: 341 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 400

Query: 363 ACSHAGLTDQGLEYFKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDG 422
           ACSHAGL  +G  +F  M+  + +EPG EHY C VDLLGRAG L +A +LI+ M +KPD 
Sbjct: 401 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 460

Query: 423 AVWGALLGACKIHQNVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMM 482
            +W +LL AC+IH+NVELAE++  R+ EL+  N GYY+LLS+IY+DA   K V R+R++M
Sbjct: 461 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 520

Query: 483 KKRNLKKDPGCSHVELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFGGPKR----- 542
           K R L K PG S +ELNG VH F++GD +HPQ E+IY  L EL   + E G         
Sbjct: 521 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVC 580

Query: 543 ---DESNKDLLTGAGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIV 602
              DE  K++      VHSEKLA+AFG++NT+ G+ + ++KNLR+C DCH   KL+SKIV
Sbjct: 581 HDVDEEEKEMTL---RVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 640

Query: 603 HRQLTVRDATRFHHFRNGSCSCKDYW 612
            R+  VRDA RFHHF++G CSC DYW
Sbjct: 641 DREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]

BLAST of Sed0003272 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 488.8 bits (1257), Expect = 6.3e-138
Identity = 250/613 (40.78%), Postives = 372/613 (60.69%), Query Frame = 0


Query: 8   WNTQLRELAKRCQFLQALNLYSQMLRHGDRPNAFTFPFALKSCAALSRPILGAQLHGQII 67
           WNT +   ++      AL +   M     +P+  T    L + +AL    +G ++HG  +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263

Query: 68  KLGCEAEPFVQTGLISMYCKGSSVENARKVFDENPQSRRLTVCYNALVSGYVLNLKISDA 127
           + G ++   + T L+ MY K  S+E AR++FD      R  V +N+++  YV N    +A
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSWNSMIDAYVQNENPKEA 323

Query: 128 VLLFRRMNEVGVSVNSVTLLGLIPICVSPINLELGSSLHGATLKYGLDSDVSVVNCFITM 187
           +L+F++M + GV    V+++G +  C    +LE G  +H  +++ GLD +VSVVN  I+M
Sbjct: 324 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 383

Query: 188 YMKFGLVNYAQELFHEMPEKGLISWNAMISGYAQNGLASNVLELYYKMELHGVHPDPVTF 247
           Y K   V+ A  +F ++  + L+SWNAMI G+AQNG   + L  + +M    V PD  T+
Sbjct: 384 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 443

Query: 248 VGVLSSCANLGAQSVGREVEFKIQACWFGQNPFLSNSLINMYARCGNLAKARALFDEMPK 307
           V V+++ A L      + +   +      +N F++ +L++MYA+CG +  AR +FD M +
Sbjct: 444 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 503

Query: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFEEMISCGIVPDGTAFVSVLSACSHAGLTDQGLEY 367
           R + +W A+I GYG HG G+ A++LFEEM    I P+G  F+SV+SACSH+GL + GL+ 
Sbjct: 504 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 563

Query: 368 FKMMRTNYQLEPGPEHYSCTVDLLGRAGRLNEARNLIESMPIKPDGAVWGALLGACKIHQ 427
           F MM+ NY +E   +HY   VDLLGRAGRLNEA + I  MP+KP   V+GA+LGAC+IH+
Sbjct: 564 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 623

Query: 428 NVELAELAFERVVELEPENIGYYVLLSNIYSDANNSKGVLRIRVMMKKRNLKKDPGCSHV 487
           NV  AE A ER+ EL P++ GY+VLL+NIY  A+  + V ++RV M ++ L+K PGCS V
Sbjct: 624 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 683

Query: 488 ELNGRVHPFVVGDRKHPQAEEIYRVLDELEALVQEFG---------GPKRDESNKDLLTG 547
           E+   VH F  G   HP +++IY  L++L   ++E G         G + D   + L T 
Sbjct: 684 EIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLST- 743

Query: 548 AGGVHSEKLAVAFGLLNTMSGTEIVIIKNLRICEDCHLFFKLVSKIVHRQLTVRDATRFH 607
               HSEKLA++FGLLNT +GT I + KNLR+C DCH   K +S +  R++ VRD  RFH
Sbjct: 744 ----HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFH 803

Query: 608 HFRNGSCSCKDYW 612
           HF+NG+CSC DYW
Sbjct: 804 HFKNGACSCGDYW 809

The following BLAST results are available for this feature:

BLAST of Sed0003272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132717.1	0.0e+00	86.04	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [M...	[more]
KAG6604344.1	0.0e+00	85.34	putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cu...	[more]
XP_023544808.1	0.0e+00	85.67	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [C...	[more]
XP_022977443.1	0.0e+00	85.02	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [C...	[more]
XP_038882846.1	0.0e+00	85.02	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [B...	[more]

BLAST of Sed0003272 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAY1	1.1e-230	63.05	Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
Q9LN01	5.1e-140	39.84	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SUH6	1.8e-137	41.60	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q9LW32	4.0e-137	41.37	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]
Q3E6Q1	8.9e-137	40.78	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]

BLAST of Sed0003272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUL8	0.0e+00	86.04	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
A0A6J1IQ02	0.0e+00	85.02	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
A0A6J1EDM7	2.3e-310	85.34	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
A0A0A0KFC9	4.4e-304	83.74	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4526...	[more]
A0A1S3CH87	2.8e-303	83.09	putative pentatricopeptide repeat-containing protein At3g11460 OS=Cucumis melo O...	[more]

BLAST of Sed0003272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11460.1	7.5e-232	63.05	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	3.6e-141	39.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	1.3e-138	41.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G26782.1	2.8e-138	41.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	6.3e-138	40.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 210..256 e-value: 1.6E-8 score: 34.6 coord: 310..356 e-value: 7.2E-8 score: 32.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 109..142 e-value: 3.4E-4 score: 18.6 coord: 210..243 e-value: 3.5E-6 score: 24.8 coord: 311..344 e-value: 1.4E-7 score: 29.2 coord: 283..308 e-value: 9.1E-5 score: 20.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 181..209 e-value: 0.001 score: 19.2 coord: 80..100 e-value: 0.53 score: 10.7 coord: 109..139 e-value: 2.7E-4 score: 21.0 coord: 283..308 e-value: 1.8E-5 score: 24.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 278..308 score: 9.909073
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 107..141 score: 8.527949
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 309..343 score: 11.136739
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 208..242 score: 10.89559
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 157..272 e-value: 4.3E-22 score: 80.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 273..508 e-value: 9.3E-41 score: 142.2 coord: 7..156 e-value: 1.4E-22 score: 82.5
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 482..601 e-value: 7.5E-28 score: 96.9
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 5..605
None	No IPR available	PANTHER	PTHR24015:SF505	OS01G0819800 PROTEIN	coord: 5..605

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003272.1	Sed0003272.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding