Sed0003268 (gene) Chayote v1

Overview


Name	Sed0003268
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR71-like
Location	LG01: 5607164 .. 5607878 (+)
RNA-Seq Expression	Sed0003268
Synteny	Sed0003268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTATTTCCCAAACCCCAAAAATCCTTTCTCTCTCTCTAAACTTTCTCTCTCCTCTGCAACTTTTTTCATTCCGTTATGAAGCACCTAATCCGCCGCCTGTCCCGCGTCGCCGACTCCTCCCAGTCCAGTTACTGCCTTCTCCGGCCGGATTCCCCCGGCCGCCGCCCGGGTCGGGCCCACTCCTTCCGCGCCGCCGCCGCCAGCAAATTCCGGCGAACCAGATCTGAAGGTGGCGGCGGCGCTGTCCCAGAGGGCCACGTCCCGGTTTACGTGGGCGACGAGATGGAGCGGTTCGCGGTGAGCGCGGAGGTGCTGAACCACCCGGTTTTCATGAGTCTGCTGGAGAAATCGGCTCAGGAATACGGGTACCAACAGCAGGGGGTTCTCCGAATCCCCTGTCACGTGCTGCTCTTCGAGCGCCTGCTTGAAGCCATTCGAATCGGCGGCCACGACTCACGTGACCTTCAGGACATTCTCATCACCGGCGACGAATTTCTCATCTGAATTTTAAACTCTGTTTTTTTTTTTGTTGTTTGGTTTAGGTTTTTTGGTAATGTAAATATGAAATACGACATATCCCTTTCTGTGATCTGGGTTTCGGATCCGGGAAGACGAACAGAGATTTCTTTTTTGAAATTATGAAATTGGTCCATATCTGGGTTTTGATTTAAGTGGATCTCGAAAATGTGTGTTTGGGTAATTAAATATTTCGC

mRNA sequence

CTCTATTTCCCAAACCCCAAAAATCCTTTCTCTCTCTCTAAACTTTCTCTCTCCTCTGCAACTTTTTTCATTCCGTTATGAAGCACCTAATCCGCCGCCTGTCCCGCGTCGCCGACTCCTCCCAGTCCAGTTACTGCCTTCTCCGGCCGGATTCCCCCGGCCGCCGCCCGGGTCGGGCCCACTCCTTCCGCGCCGCCGCCGCCAGCAAATTCCGGCGAACCAGATCTGAAGGTGGCGGCGGCGCTGTCCCAGAGGGCCACGTCCCGGTTTACGTGGGCGACGAGATGGAGCGGTTCGCGGTGAGCGCGGAGGTGCTGAACCACCCGGTTTTCATGAGTCTGCTGGAGAAATCGGCTCAGGAATACGGGTACCAACAGCAGGGGGTTCTCCGAATCCCCTGTCACGTGCTGCTCTTCGAGCGCCTGCTTGAAGCCATTCGAATCGGCGGCCACGACTCACGTGACCTTCAGGACATTCTCATCACCGGCGACGAATTTCTCATCTGAATTTTAAACTCTGTTTTTTTTTTTGTTGTTTGGTTTAGGTTTTTTGGTAATGTAAATATGAAATACGACATATCCCTTTCTGTGATCTGGGTTTCGGATCCGGGAAGACGAACAGAGATTTCTTTTTTGAAATTATGAAATTGGTCCATATCTGGGTTTTGATTTAAGTGGATCTCGAAAATGTGTGTTTGGGTAATTAAATATTTCGC

Coding sequence (CDS)

ATGAAGCACCTAATCCGCCGCCTGTCCCGCGTCGCCGACTCCTCCCAGTCCAGTTACTGCCTTCTCCGGCCGGATTCCCCCGGCCGCCGCCCGGGTCGGGCCCACTCCTTCCGCGCCGCCGCCGCCAGCAAATTCCGGCGAACCAGATCTGAAGGTGGCGGCGGCGCTGTCCCAGAGGGCCACGTCCCGGTTTACGTGGGCGACGAGATGGAGCGGTTCGCGGTGAGCGCGGAGGTGCTGAACCACCCGGTTTTCATGAGTCTGCTGGAGAAATCGGCTCAGGAATACGGGTACCAACAGCAGGGGGTTCTCCGAATCCCCTGTCACGTGCTGCTCTTCGAGCGCCTGCTTGAAGCCATTCGAATCGGCGGCCACGACTCACGTGACCTTCAGGACATTCTCATCACCGGCGACGAATTTCTCATCTGA

Protein sequence

MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAAAASKFRRTRSEGGGGAVPEGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEAIRIGGHDSRDLQDILITGDEFLI

Homology

[Close]

BLAST of Sed0003268 vs. NCBI nr
Match: XP_038901919.1 (auxin-responsive protein SAUR71 [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 2.6e-52
Identity = 112/142 (78.87%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MK LIRRLSRVADSSQS YCLLRP      +RPGRAHSFRAAAA+KFRR+RSE G   VP
Sbjct: 1   MKQLIRRLSRVADSSQSHYCLLRPTDAVAAQRPGRAHSFRAAAANKFRRSRSE-GAVPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGD 139
           AIRIG HDSRDL D+L  ++GD
Sbjct: 121 AIRIGDHDSRDLNDLLSSLSGD 141

[Close]

BLAST of Sed0003268 vs. NCBI nr
Match: XP_022947780.1 (auxin-responsive protein SAUR71-like [Cucurbita moschata] >KAG7034850.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-51
Identity = 112/145 (77.24%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MKHLIRRLSRVADSSQS YCLL   S    RRPGRAHSFRAAAA+KFRR+RSE G   VP
Sbjct: 1   MKHLIRRLSRVADSSQSHYCLLHSHSAAAARRPGRAHSFRAAAANKFRRSRSE-GAVPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGDEFL 142
           AIRIG  +SRDLQ IL  ++  +FL
Sbjct: 121 AIRIGDQESRDLQSILSSLSNPDFL 144

[Close]

BLAST of Sed0003268 vs. NCBI nr
Match: KAG6570587.1 (Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 113/142 (79.58%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MK LIRRLSRVADSSQSSYCLLR DS    RRPGRAHSFRAAAASKFRR+R E G   VP
Sbjct: 1   MKQLIRRLSRVADSSQSSYCLLRTDSSAAARRPGRAHSFRAAAASKFRRSRPE-GSMPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGD 139
           AIRIG  DS  LQD+L  ++GD
Sbjct: 121 AIRIGDEDSIYLQDLLSSLSGD 141

[Close]

BLAST of Sed0003268 vs. NCBI nr
Match: XP_022985780.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima] >XP_023512929.1 auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 113/142 (79.58%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MK LIRRLSRVADSSQSSYCLLR DS    RRPGRAHSFRAAAASKFRR+R E G   VP
Sbjct: 1   MKQLIRRLSRVADSSQSSYCLLRTDSSAAARRPGRAHSFRAAAASKFRRSRPE-GAMPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGD 139
           AIRIG  DS  LQD+L  ++GD
Sbjct: 121 AIRIGDEDSIYLQDLLSSLSGD 141

[Close]

BLAST of Sed0003268 vs. NCBI nr
Match: XP_022944147.1 (auxin-responsive protein SAUR71-like [Cucurbita moschata] >KAG7010439.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 113/142 (79.58%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MK LIRRLSRVADSSQSSYCLLR DS    RRPGRAHSFRAAAASKFRR+R E G   VP
Sbjct: 1   MKQLIRRLSRVADSSQSSYCLLRTDSSAAARRPGRAHSFRAAAASKFRRSRPE-GAMPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGD 139
           AIRIG  DS  LQD+L  ++GD
Sbjct: 121 AIRIGDEDSIYLQDLLSSLSGD 141

[Close]

BLAST of Sed0003268 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-35
Identity = 83/138 (60.14%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPG-RAHSFRAAAASKFRRTRSEGGGGAVPE 60
           MK LIRRLSRVADS+Q  Y LLR DS  +RP  R+ SF  ++ ++    RS+    +VPE
Sbjct: 1   MKQLIRRLSRVADSAQ--YSLLRSDS--QRPSRRSESFLRSSVTR----RSKKQTSSVPE 60

Query: 61  GHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEA 120
           GHVPVYVGDEMERF VSAE+LNHPVF+ LL +SAQEYGY+Q+GVL+IPCHVL+FER++E+
Sbjct: 61  GHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMES 120

Query: 121 IRIGGHDSRDLQDILITG 138
           +R+G     D+QD++  G
Sbjct: 121 LRLGLPVPIDVQDLIGDG 130

[Close]

BLAST of Sed0003268 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-32
Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAAAASKFRRTRSEGGGGAVPEG 60
           MK LIRRLSRVADS+Q  Y LLR +                 S+  RT+ E     VPEG
Sbjct: 1   MKQLIRRLSRVADSTQ--YSLLRSE-----------------SQRGRTKKEKHKSWVPEG 60

Query: 61  HVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEAI 120
           HVPVYVG EMERF V+AE+LNHPVF++LL++SAQEYGY+QQGVLRIPCHVL+FER+LE++
Sbjct: 61  HVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESL 104

Query: 121 RIG 124
           R+G
Sbjct: 121 RLG 104

[Close]

BLAST of Sed0003268 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-32
Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAA----AASKFRRTRSEGGGGA 60
           MKHLIRRLSRVADSS S + + R  S  R     H   A     +    RR  +      
Sbjct: 1   MKHLIRRLSRVADSS-SEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNT------ 60

Query: 61  VPEGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERL 120
           VP GHVPVYVG+EMERF VSAE++NHP+F+ LL +SAQEYGY Q+GVL IPCHV++FER+
Sbjct: 61  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 120

Query: 121 LEAIRIGGHD-SRDLQDI---LITGDEFL 142
           +E +R+GG + S DL+++   L++GDE +
Sbjct: 121 VETLRLGGFEGSGDLENLVASLLSGDELI 142

[Close]

BLAST of Sed0003268 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24
Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAAAASKFRRTRSEGGGGAVPEG 60
           MK LIRRLSR+ADSS  +           R G  H   +  +S     +      +VP G
Sbjct: 1   MKPLIRRLSRIADSSSCN---------RNRSGDIHHPTSTYSSSVFLVKRATVASSVPSG 60

Query: 61  HVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEAI 120
           HVPV VG++ ERF VSAE+LNHPVF+ LL +SAQEYGY Q+GVL IPC+V +FE+++E++
Sbjct: 61  HVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESL 120

Query: 121 RIGGHDSRDLQDILITGDE 140
           R G  D        ++G++
Sbjct: 121 RSGIADDTSELIASLSGED 130

[Close]

BLAST of Sed0003268 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10
Identity = 29/65 (44.62%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 57  VPEGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERL 116
           VP+GH PVYVG+   R+ V    L HP F SLL+++ +E+G+     L IPC  L+F+ L
Sbjct: 43  VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTL 102

Query: 117 LEAIR 122
              IR
Sbjct: 103 TSMIR 107

[Close]

BLAST of Sed0003268 vs. ExPASy TrEMBL
Match: A0A6J1G7V1 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111451539 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 112/145 (77.24%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MKHLIRRLSRVADSSQS YCLL   S    RRPGRAHSFRAAAA+KFRR+RSE G   VP
Sbjct: 1   MKHLIRRLSRVADSSQSHYCLLHSHSAAAARRPGRAHSFRAAAANKFRRSRSE-GAVPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGDEFL 142
           AIRIG  +SRDLQ IL  ++  +FL
Sbjct: 121 AIRIGDQESRDLQSILSSLSNPDFL 144

[Close]

BLAST of Sed0003268 vs. ExPASy TrEMBL
Match: A0A6J1JC90 (auxin-responsive protein SAUR71-like OS=Cucurbita maxima OX=3661 GN=LOC111483728 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51
Identity = 113/142 (79.58%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MK LIRRLSRVADSSQSSYCLLR DS    RRPGRAHSFRAAAASKFRR+R E G   VP
Sbjct: 1   MKQLIRRLSRVADSSQSSYCLLRTDSSAAARRPGRAHSFRAAAASKFRRSRPE-GAMPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGD 139
           AIRIG  DS  LQD+L  ++GD
Sbjct: 121 AIRIGDEDSIYLQDLLSSLSGD 141

[Close]

BLAST of Sed0003268 vs. ExPASy TrEMBL
Match: A0A6J1FV00 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111448690 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51
Identity = 113/142 (79.58%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDS--PGRRPGRAHSFRAAAASKFRRTRSEGGGGAVP 60
           MK LIRRLSRVADSSQSSYCLLR DS    RRPGRAHSFRAAAASKFRR+R E G   VP
Sbjct: 1   MKQLIRRLSRVADSSQSSYCLLRTDSSAAARRPGRAHSFRAAAASKFRRSRPE-GAMPVP 60

Query: 61  EGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLE 120
           +GHVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LE
Sbjct: 61  QGHVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLE 120

Query: 121 AIRIGGHDSRDLQDIL--ITGD 139
           AIRIG  DS  LQD+L  ++GD
Sbjct: 121 AIRIGDEDSIYLQDLLSSLSGD 141

[Close]

BLAST of Sed0003268 vs. ExPASy TrEMBL
Match: A0A0A0KGB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137590 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.9e-51
Identity = 110/140 (78.57%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAAAASKFRRTRSEGGGGAVPEG 60
           MK LIRRLSRVADSSQS YCLLR  +P +RP RAHSFRAAAA+KFRR+RSE G   VP+G
Sbjct: 1   MKQLIRRLSRVADSSQSHYCLLR--TPDQRPARAHSFRAAAANKFRRSRSE-GALPVPQG 60

Query: 61  HVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEAI 120
           HVPVYVGDEMERFAVSAE+LNHPVF++LL+KSAQEYGY+Q+GVLRIPCHVLLFER+LEAI
Sbjct: 61  HVPVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAI 120

Query: 121 RIGGHDSRDLQDIL--ITGD 139
           RIG  DSRDL D+L  ++GD
Sbjct: 121 RIGDPDSRDLHDLLSSLSGD 137

[Close]

BLAST of Sed0003268 vs. ExPASy TrEMBL
Match: A0A5A7UFB2 (Auxin-responsive protein SAUR71 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004690 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50
Identity = 109/140 (77.86%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAAAASKFRRTRSEGGGGAVPEG 60
           MK LIRRLSRVADSSQS YCLLR  +P +RP RAHSFRAAAA+KFRR+RS+ G   VP+G
Sbjct: 1   MKQLIRRLSRVADSSQSHYCLLR--TPDQRPARAHSFRAAAANKFRRSRSD-GAVPVPQG 60

Query: 61  HVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEAI 120
           HVPVYVGDEMERFAVSAE+LNHPVF++LLEKSAQEYGY+Q+GVLRIPCHVL+FER+LEAI
Sbjct: 61  HVPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLEAI 120

Query: 121 RIGGHDSRDLQDIL--ITGD 139
           RIG  DSRDL D+L  ++GD
Sbjct: 121 RIGDPDSRDLHDLLSSLSGD 137

[Close]

BLAST of Sed0003268 vs. TAIR 10
Match: AT3G12830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 151.0 bits (380), Expect = 7.3e-37
Identity = 83/138 (60.14%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPG-RAHSFRAAAASKFRRTRSEGGGGAVPE 60
           MK LIRRLSRVADS+Q  Y LLR DS  +RP  R+ SF  ++ ++    RS+    +VPE
Sbjct: 1   MKQLIRRLSRVADSAQ--YSLLRSDS--QRPSRRSESFLRSSVTR----RSKKQTSSVPE 60

Query: 61  GHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEA 120
           GHVPVYVGDEMERF VSAE+LNHPVF+ LL +SAQEYGY+Q+GVL+IPCHVL+FER++E+
Sbjct: 61  GHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMES 120

Query: 121 IRIGGHDSRDLQDILITG 138
           +R+G     D+QD++  G
Sbjct: 121 LRLGLPVPIDVQDLIGDG 130

[Close]

BLAST of Sed0003268 vs. TAIR 10
Match: AT1G56150.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-33
Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAAAASKFRRTRSEGGGGAVPEG 60
           MK LIRRLSRVADS+Q  Y LLR +                 S+  RT+ E     VPEG
Sbjct: 1   MKQLIRRLSRVADSTQ--YSLLRSE-----------------SQRGRTKKEKHKSWVPEG 60

Query: 61  HVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEAI 120
           HVPVYVG EMERF V+AE+LNHPVF++LL++SAQEYGY+QQGVLRIPCHVL+FER+LE++
Sbjct: 61  HVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESL 104

Query: 121 RIG 124
           R+G
Sbjct: 121 RLG 104

[Close]

BLAST of Sed0003268 vs. TAIR 10
Match: AT1G16510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 139.0 bits (349), Expect = 2.9e-33
Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAA----AASKFRRTRSEGGGGA 60
           MKHLIRRLSRVADSS S + + R  S  R     H   A     +    RR  +      
Sbjct: 1   MKHLIRRLSRVADSS-SEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNT------ 60

Query: 61  VPEGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERL 120
           VP GHVPVYVG+EMERF VSAE++NHP+F+ LL +SAQEYGY Q+GVL IPCHV++FER+
Sbjct: 61  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 120

Query: 121 LEAIRIGGHD-SRDLQDI---LITGDEFL 142
           +E +R+GG + S DL+++   L++GDE +
Sbjct: 121 VETLRLGGFEGSGDLENLVASLLSGDELI 142

[Close]

BLAST of Sed0003268 vs. TAIR 10
Match: AT1G79130.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 1   MKHLIRRLSRVADSSQSSYCLLRPDSPGRRPGRAHSFRAAAASKFRRTRSEGGGGAVPEG 60
           MK LIRRLSR+ADSS  +           R G  H   +  +S     +      +VP G
Sbjct: 1   MKPLIRRLSRIADSSSCN---------RNRSGDIHHPTSTYSSSVFLVKRATVASSVPSG 60

Query: 61  HVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERLLEAI 120
           HVPV VG++ ERF VSAE+LNHPVF+ LL +SAQEYGY Q+GVL IPC+V +FE+++E++
Sbjct: 61  HVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESL 120

Query: 121 RIGGHDSRDLQDILITGDE 140
           R G  D        ++G++
Sbjct: 121 RSGIADDTSELIASLSGED 130

[Close]

BLAST of Sed0003268 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.9 bits (172), Expect = 9.6e-13
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 57  VPEGHVPVYVGDEMERFAVSAEVLNHPVFMSLLEKSAQEYGYQQQGVLRIPCHVLLFERL 116
           VP+G++ VYVG E+ RF +    L+H +F  LLEK+ +EYG+   G L IPC V  F+ L
Sbjct: 79  VPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYL 138

Query: 117 LEAIRIGGHDSRDLQD 133
           L+ I     D    +D
Sbjct: 139 LKCIENHPKDDTSAED 154

The following BLAST results are available for this feature:

BLAST of Sed0003268 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901919.1	2.6e-52	78.87	auxin-responsive protein SAUR71 [Benincasa hispida]	[more]
XP_022947780.1	2.2e-51	77.24	auxin-responsive protein SAUR71-like [Cucurbita moschata] >KAG7034850.1 Auxin-re...	[more]
KAG6570587.1	3.7e-51	79.58	Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022985780.1	3.7e-51	79.58	auxin-responsive protein SAUR71-like [Cucurbita maxima] >XP_023512929.1 auxin-re...	[more]
XP_022944147.1	3.7e-51	79.58	auxin-responsive protein SAUR71-like [Cucurbita moschata] >KAG7010439.1 Auxin-re...	[more]

BLAST of Sed0003268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTV3	1.0e-35	60.14	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]
Q9SGU2	3.1e-32	60.98	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9SA49	4.0e-32	52.35	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
O64538	1.8e-24	45.32	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
O65695	3.3e-10	44.62	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]

BLAST of Sed0003268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7V1	1.1e-51	77.24	auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A6J1JC90	1.8e-51	79.58	auxin-responsive protein SAUR71-like OS=Cucurbita maxima OX=3661 GN=LOC111483728...	[more]
A0A6J1FV00	1.8e-51	79.58	auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC1114486...	[more]
A0A0A0KGB4	6.9e-51	78.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137590 PE=3 SV=1	[more]
A0A5A7UFB2	1.2e-50	77.86	Auxin-responsive protein SAUR71 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Sed0003268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12830.1	7.3e-37	60.14	SAUR-like auxin-responsive protein family	[more]
AT1G56150.1	2.2e-33	60.98	SAUR-like auxin-responsive protein family	[more]
AT1G16510.1	2.9e-33	52.35	SAUR-like auxin-responsive protein family	[more]
AT1G79130.1	1.3e-25	45.32	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	9.6e-13	42.11	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 41..119 e-value: 4.7E-28 score: 97.2
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 2..139
None	No IPR available	PANTHER	PTHR31374:SF165	AUXIN-RESPONSIVE PROTEIN SAUR72	coord: 2..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003268.1	Sed0003268.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin